Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr07

Orthogroup ID

OG0019733

Physical Location & Seq

Genomic Coordinates Reverse (-)

23896407 .. 23896703

Gene Structure 297 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD07G1164300.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 297 bp

ATGGCGGCAACCACCCCCTCCCCTCGCGAAGAGAATGTCTACATGGCCAAGTTGGCTGAGCAAGCCGGGCGTTACGAGGAGATGGTTGAGTTCGTCGAGAAGGTCTCCGCCTCCGCCTATAAAGAGGAGCTCACCGTCGAGGAGCGCAACCTCCTCTCCGTCGCCTACAAGAACGTCATCGGTGCCTGCCGTGCCTCCTGGCGCATCATCTCCTCCATCGAGCAAAAGGAGGAGAGTCGCGACAACGACGACCACATTGCCACGATCCGTGACTACCAATCCAAGATCGAGACCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005774 GO:0005794 GO:0005829 GO:0005886 GO:0007154 GO:0007165 GO:0008150 GO:0009719 GO:0009725 GO:0009741 GO:0009742 GO:0009755 GO:0009987 GO:0010033 GO:0012505 GO:0014070 GO:0016020 GO:0019222 GO:0023052 GO:0031090 GO:0032870 GO:0033993 GO:0042221 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043401 GO:0044422 GO:0044424 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0048545 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0065007 GO:0070887 GO:0071310 GO:0071367 GO:0071383 GO:0071396 GO:0071407 GO:0071495 GO:0071944 GO:0098588 GO:0098805 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

ko04011 ko04110 ko04114 ko04151 ko04390 ko04391 ko04722 ko05169 ko05203 map04011 map04110 map04114 map04151 map04390 map04391 map04722 map05169 map05203

Pfam Domains

Protein Families

14-3-3

Protein Analysis

99

Amino Acids

11.22

Weight (kDa)

4.83

Isoelectric Point (pI)

66.94

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
14-3-3	PF00244	15 - 97	3.8e-27	14-3-3 protein

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Orthologous Genes (Group: OG0019733)

Species	Orthologous Gene IDs
malus_domestica	MD07G1164300.v1.1 MD10G1023000.v1.1
prunus_persica	Prupe.1G302200_v2.0.a1
rosa_rugosa	Rorug02G0315400.1 Rorug02G0315500 Rorug02G0315600 Rorug02G0315700

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	182
AccI	GTMKAC	1 cut(s)	39
AccII	CGCG	2 cut(s)	27, 240
AciI	CCGC	3 cut(s)	5, 108, 114
AclWI	GGATC	1 cut(s)	259
AcoI	YGGCCR	1 cut(s)	45
AjnI	CCWGG	1 cut(s)	197
AluBI	AGCT	1 cut(s)	130
AluI	AGCT	1 cut(s)	130
Alw21I	GWGCWC	1 cut(s)	132
Alw26I	GTCTC	2 cut(s)	109, 284
AlwI	GGATC	1 cut(s)	259
AoxI	GGCC	1 cut(s)	45
ArsI	GACNNNNNNTTYG	2 cut(s)	21, 53
AspLEI	GCGC	2 cut(s)	147, 204
AsuC2I	CCSGG	1 cut(s)	67
AsuHPI	GGTGA	1 cut(s)	124
BalI	TGGCCA	1 cut(s)	47
BanI	GGYRCC	1 cut(s)	182
BanII	GRGCYC	1 cut(s)	132
Bbv12I	GWGCWC	1 cut(s)	132
BccI	CCATC	2 cut(s)	76, 224
BceAI	ACGGC	1 cut(s)	174
BcgI	CGANNNNNNTGC	2 cut(s)	239, 273
BciT130I	CCWGG	1 cut(s)	199
BcnI	CCSGG	1 cut(s)	67
BcoDI	GTCTC	2 cut(s)	109, 284
BfaI	CTAG	1 cut(s)	295
BglI	GCCNNNNNGGC	1 cut(s)	53
BisI	GCNGC	1 cut(s)	6
BlpI	GCTNAGC	1 cut(s)	57
BlsI	GCNGC	1 cut(s)	7
Bme1390I	CCNGG	2 cut(s)	67, 199
BmiI	GGNNCC	1 cut(s)	184
BmrFI	CCNGG	2 cut(s)	67, 199
BmsI	GCATC	1 cut(s)	213
BplI	GAGNNNNNCTC	2 cut(s)	89, 121
Bpu1102I	GCTNAGC	1 cut(s)	57
BpuMI	CCSGG	1 cut(s)	67
BsaI	GGTCTC	2 cut(s)	109, 284
BsaXI	ACNNNNNCTCC	2 cut(s)	140, 170
Bse3DI	GCAATG	1 cut(s)	255
BseBI	CCWGG	1 cut(s)	199
BseMI	GCAATG	1 cut(s)	255
BseMII	CTCAG	1 cut(s)	48
BseRI	GAGGAG	6 cut(s)	92, 140, 143, 155, 202, 245
Bsh1236I	CGCG	2 cut(s)	27, 240
BshFI	GGCC	1 cut(s)	47
BshNI	GGYRCC	1 cut(s)	182
BsiHKAI	GWGCWC	1 cut(s)	132
BsiSI	CCGG	1 cut(s)	66
BsmAI	GTCTC	2 cut(s)	109, 284
BsnI	GGCC	1 cut(s)	47
Bso31I	GGTCTC	2 cut(s)	109, 284
Bsp1286I	GDGCHC	1 cut(s)	132
Bsp143I	GATC	2 cut(s)	264, 285
Bsp1720I	GCTNAGC	1 cut(s)	57
Bsp68I	TCGCGA	2 cut(s)	27, 240
BspACI	CCGC	3 cut(s)	5, 108, 114
BspANI	GGCC	1 cut(s)	47
BspCNI	CTCAG	1 cut(s)	49
BspFNI	CGCG	2 cut(s)	27, 240
BspLI	GGNNCC	1 cut(s)	184
BspPI	GGATC	1 cut(s)	259
BspT107I	GGYRCC	1 cut(s)	182
BspTNI	GGTCTC	2 cut(s)	109, 284
BsrDI	GCAATG	1 cut(s)	255
BssMI	GATC	2 cut(s)	264, 285
Bst2UI	CCWGG	1 cut(s)	199
Bst4CI	ACNGT	1 cut(s)	136
Bst6I	CTCTTC	1 cut(s)	24
BstC8I	GCNNGC	2 cut(s)	63, 187
BstDEI	CTNAG	1 cut(s)	57
BstFNI	CGCG	2 cut(s)	27, 240
BstHHI	GCGC	2 cut(s)	147, 204
BstKTI	GATC	2 cut(s)	267, 288
BstMAI	GTCTC	2 cut(s)	109, 284
BstMBI	GATC	2 cut(s)	264, 285
BstMWI	GCNNNNNNNGC	4 cut(s)	53, 62, 67, 191
BstNI	CCWGG	1 cut(s)	199
BstSCI	CCNGG	2 cut(s)	65, 197
BstUI	CGCG	2 cut(s)	27, 240
BsuRI	GGCC	1 cut(s)	47
BtuMI	TCGCGA	2 cut(s)	27, 240
Cac8I	GCNNGC	2 cut(s)	63, 187
CfoI	GCGC	2 cut(s)	147, 204
CviAII	CATG	1 cut(s)	43
CviJI	RGCY	4 cut(s)	47, 56, 65, 130
CviKI_1	RGCY	4 cut(s)	47, 56, 65, 130
DdeI	CTNAG	1 cut(s)	57
DpnI	GATC	2 cut(s)	266, 287
DpnII	GATC	2 cut(s)	264, 285
EaeI	YGGCCR	1 cut(s)	45
Eam1104I	CTCTTC	1 cut(s)	24
EarI	CTCTTC	1 cut(s)	24
EciI	GGCGGA	2 cut(s)	97, 103
Ecl136II	GAGCTC	1 cut(s)	130
Eco24I	GRGCYC	1 cut(s)	132
Eco31I	GGTCTC	2 cut(s)	109, 284
Eco53kI	GAGCTC	1 cut(s)	130
EcoICRI	GAGCTC	1 cut(s)	130
EcoRII	CCWGG	1 cut(s)	197
EcoT38I	GRGCYC	1 cut(s)	132
FaeI	CATG	1 cut(s)	46
FaiI	YATR	2 cut(s)	44, 120
FatI	CATG	1 cut(s)	42
FblI	GTMKAC	1 cut(s)	39
Fnu4HI	GCNGC	1 cut(s)	6
FriOI	GRGCYC	1 cut(s)	132
Fsp4HI	GCNGC	1 cut(s)	6
FspBI	CTAG	1 cut(s)	295
GlaI	GCGC	2 cut(s)	146, 203
GluI	GCNGC	1 cut(s)	6
HaeIII	GGCC	1 cut(s)	47
HapII	CCGG	1 cut(s)	66
HhaI	GCGC	2 cut(s)	147, 204
Hin1II	CATG	1 cut(s)	46
Hin6I	GCGC	2 cut(s)	145, 202
HinP1I	GCGC	2 cut(s)	145, 202
HinfI	GANTC	1 cut(s)	235
HpaII	CCGG	1 cut(s)	66
HphI	GGTGA	1 cut(s)	124
Hpy166II	GTNNAC	1 cut(s)	40
Hpy188III	TCNNGA	4 cut(s)	26, 97, 239, 289
Hpy8I	GTNNAC	1 cut(s)	40
Hpy99I	CGWCG	4 cut(s)	98, 140, 164, 251
HpyAV	CCTTC	1 cut(s)	94
HpyCH4III	ACNGT	1 cut(s)	136
HpyCH4IV	ACGT	1 cut(s)	174
HpyF10VI	GCNNNNNNNGC	4 cut(s)	53, 62, 67, 191
HpyF3I	CTNAG	1 cut(s)	57
HpySE526I	ACGT	1 cut(s)	174
Hsp92II	CATG	1 cut(s)	46
HspAI	GCGC	2 cut(s)	145, 202
Kzo9I	GATC	2 cut(s)	264, 285
LmnI	GCTCC	2 cut(s)	127, 142
LpnPI	CCDG	4 cut(s)	79, 184, 199, 211
LweI	GCATC	1 cut(s)	213
MaeI	CTAG	1 cut(s)	295
MaeII	ACGT	1 cut(s)	174
MaeIII	GTNAC	2 cut(s)	71, 269
MalI	GATC	2 cut(s)	266, 287
MboI	GATC	2 cut(s)	264, 285
MboII	GAAGA	1 cut(s)	41
MhlI	GDGCHC	1 cut(s)	132
MlsI	TGGCCA	1 cut(s)	47
MluNI	TGGCCA	1 cut(s)	47
MlyI	GAGTC	1 cut(s)	244
Mox20I	TGGCCA	1 cut(s)	47
MscI	TGGCCA	1 cut(s)	47
Msp20I	TGGCCA	1 cut(s)	47
MspI	CCGG	1 cut(s)	66
MspR9I	CCNGG	2 cut(s)	67, 199
MvaI	CCWGG	1 cut(s)	199
MvnI	CGCG	2 cut(s)	27, 240
MwoI	GCNNNNNNNGC	4 cut(s)	53, 62, 67, 191
NciI	CCSGG	1 cut(s)	67
NdeII	GATC	2 cut(s)	264, 285
NlaIII	CATG	1 cut(s)	46
NlaIV	GGNNCC	1 cut(s)	184
NmuCI	GTSAC	1 cut(s)	269
NruI	TCGCGA	2 cut(s)	27, 240
PkrI	GCNGC	1 cut(s)	7
PleI	GAGTC	1 cut(s)	243
PpsI	GAGTC	1 cut(s)	243
Psp124BI	GAGCTC	1 cut(s)	132
Psp6I	CCWGG	1 cut(s)	197
PspGI	CCWGG	1 cut(s)	197
PspN4I	GGNNCC	1 cut(s)	184
RruI	TCGCGA	2 cut(s)	27, 240
SacI	GAGCTC	1 cut(s)	132
SatI	GCNGC	1 cut(s)	6
Sau3AI	GATC	2 cut(s)	264, 285
SchI	GAGTC	1 cut(s)	244
ScrFI	CCNGG	2 cut(s)	67, 199
SduI	GDGCHC	1 cut(s)	132
SetI	ASST	5 cut(s)	105, 132, 153, 177, 296
SfaNI	GCATC	1 cut(s)	213
SsiI	CCGC	3 cut(s)	5, 108, 114
SspMI	CTAG	1 cut(s)	295
SstI	GAGCTC	1 cut(s)	132
StyD4I	CCNGG	2 cut(s)	65, 197
TaaI	ACNGT	1 cut(s)	136
TaiI	ACGT	1 cut(s)	177
TaqI	TCGA	4 cut(s)	96, 138, 219, 288
TauI	GCSGC	1 cut(s)	8
TseFI	GTSAC	1 cut(s)	269
Tsp45I	GTSAC	1 cut(s)	269
TspGWI	ACGGA	2 cut(s)	148, 257
XmiI	GTMKAC	1 cut(s)	39
XspI	CTAG	1 cut(s)	295

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.