Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp01

Orthogroup ID

OG0019733

Physical Location & Seq

Genomic Coordinates Forward (+)

29687405 .. 29687756

Gene Structure 352 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.1G302200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 264 bp

ATGATGGAGTTCGTCGAGAAAGTCTTGGCCTCCGCCGAGAAGGAGGAGCTGACCGTGGAGGAGCGCAACCTCCTTTCCGTCGCCTACAAGAACGTGATCGGCGCTCGCCGGGCCTCCTGGCGCATCATCTCCTCCATTGAGCAGAAGGAGGAGAACCGCGGCAACGACGACTACGTCGCCATGATCCGCGACTACCGATCCAAGATCGAGACCTGCGATGGCATCTCTCGGTTGCCTTTATTTCTCTATGGTCCGAACTTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005774 GO:0005794 GO:0005829 GO:0005886 GO:0007154 GO:0007165 GO:0008150 GO:0009719 GO:0009725 GO:0009741 GO:0009742 GO:0009755 GO:0009987 GO:0010033 GO:0012505 GO:0014070 GO:0016020 GO:0019222 GO:0023052 GO:0031090 GO:0032870 GO:0033993 GO:0042221 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043401 GO:0044422 GO:0044424 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0048545 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0065007 GO:0070887 GO:0071310 GO:0071367 GO:0071383 GO:0071396 GO:0071407 GO:0071495 GO:0071944 GO:0098588 GO:0098805 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

ko04011 ko04110 ko04114 ko04151 ko04390 ko04391 ko04722 ko05169 ko05203 map04011 map04110 map04114 map04151 map04390 map04391 map04722 map05169 map05203

Pfam Domains

Protein Families

14-3-3

Protein Analysis

88

Amino Acids

10.1

Weight (kDa)

5.18

Isoelectric Point (pI)

44.52

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0019733)

Species	Orthologous Gene IDs
malus_domestica	MD07G1164300.v1.1 MD10G1023000.v1.1
prunus_persica	Prupe.1G302200_v2.0.a1
rosa_rugosa	Rorug02G0315400.1 Rorug02G0315500 Rorug02G0315600 Rorug02G0315700

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	173
Acc36I	ACCTGC	1 cut(s)	221
AccII	CGCG	2 cut(s)	159, 189
AciI	CCGC	4 cut(s)	33, 157, 159, 187
AclWI	GGATC	2 cut(s)	178, 192
AjnI	CCWGG	1 cut(s)	116
AluBI	AGCT	1 cut(s)	49
AluI	AGCT	1 cut(s)	49
Alw26I	GTCTC	1 cut(s)	203
AlwI	GGATC	2 cut(s)	178, 192
AoxI	GGCC	2 cut(s)	27, 111
AspLEI	GCGC	3 cut(s)	66, 104, 123
AspS9I	GGNCC	2 cut(s)	111, 251
AsuC2I	CCSGG	1 cut(s)	110
AvaII	GGWCC	1 cut(s)	251
BccI	CCATC	1 cut(s)	212
BciT130I	CCWGG	1 cut(s)	118
BcnI	CCSGG	1 cut(s)	110
BcoDI	GTCTC	1 cut(s)	203
BfoI	RGCGCY	1 cut(s)	105
BfuAI	ACCTGC	1 cut(s)	221
BisI	GCNGC	1 cut(s)	160
BlsI	GCNGC	1 cut(s)	161
Bme1390I	CCNGG	2 cut(s)	110, 118
Bme18I	GGWCC	1 cut(s)	251
BmgT120I	GGNCC	2 cut(s)	111, 251
BmrFI	CCNGG	2 cut(s)	110, 118
BmsI	GCATC	2 cut(s)	132, 231
BpuMI	CCSGG	1 cut(s)	110
BsaI	GGTCTC	1 cut(s)	203
BsaJI	CCNNGG	2 cut(s)	54, 157
BseBI	CCWGG	1 cut(s)	118
BseDI	CCNNGG	2 cut(s)	54, 157
BseRI	GAGGAG	4 cut(s)	59, 74, 121, 164
Bsh1236I	CGCG	2 cut(s)	159, 189
BshFI	GGCC	2 cut(s)	29, 113
BsiSI	CCGG	1 cut(s)	109
BsmAI	GTCTC	1 cut(s)	203
BsnI	GGCC	2 cut(s)	29, 113
Bso31I	GGTCTC	1 cut(s)	203
Bsp143I	GATC	4 cut(s)	96, 183, 197, 204
BspACI	CCGC	4 cut(s)	33, 157, 159, 187
BspANI	GGCC	2 cut(s)	29, 113
BspFNI	CGCG	2 cut(s)	159, 189
BspMI	ACCTGC	1 cut(s)	221
BspPI	GGATC	2 cut(s)	178, 192
BspTNI	GGTCTC	1 cut(s)	203
BssECI	CCNNGG	2 cut(s)	54, 157
BssMI	GATC	4 cut(s)	96, 183, 197, 204
Bst2UI	CCWGG	1 cut(s)	118
Bst4CI	ACNGT	1 cut(s)	55
BstC8I	GCNNGC	1 cut(s)	106
BstDSI	CCRYGG	2 cut(s)	54, 157
BstFNI	CGCG	2 cut(s)	159, 189
BstH2I	RGCGCY	1 cut(s)	105
BstHHI	GCGC	3 cut(s)	66, 104, 123
BstKTI	GATC	4 cut(s)	99, 186, 200, 207
BstMAI	GTCTC	1 cut(s)	203
BstMBI	GATC	4 cut(s)	96, 183, 197, 204
BstMWI	GCNNNNNNNGC	1 cut(s)	110
BstNI	CCWGG	1 cut(s)	118
BstSCI	CCNGG	2 cut(s)	108, 116
BstUI	CGCG	2 cut(s)	159, 189
BsuRI	GGCC	2 cut(s)	29, 113
BtgI	CCRYGG	2 cut(s)	54, 157
BtgZI	GCGATG	1 cut(s)	231
BveI	ACCTGC	1 cut(s)	221
Cac8I	GCNNGC	1 cut(s)	106
CfoI	GCGC	3 cut(s)	66, 104, 123
Cfr13I	GGNCC	2 cut(s)	111, 251
Cfr42I	CCGCGG	1 cut(s)	160
CviAII	CATG	1 cut(s)	181
CviJI	RGCY	3 cut(s)	29, 49, 113
CviKI_1	RGCY	3 cut(s)	29, 49, 113
DpnI	GATC	4 cut(s)	98, 185, 199, 206
DpnII	GATC	4 cut(s)	96, 183, 197, 204
DrdI	GACNNNNNNGTC	1 cut(s)	173
DseDI	GACNNNNNNGTC	1 cut(s)	173
EciI	GGCGGA	1 cut(s)	22
Eco31I	GGTCTC	1 cut(s)	203
Eco47I	GGWCC	1 cut(s)	251
EcoRII	CCWGG	1 cut(s)	116
FaeI	CATG	1 cut(s)	184
FaiI	YATR	2 cut(s)	182, 249
FatI	CATG	1 cut(s)	180
Fnu4HI	GCNGC	1 cut(s)	160
Fsp4HI	GCNGC	1 cut(s)	160
GlaI	GCGC	3 cut(s)	65, 103, 122
GluI	GCNGC	1 cut(s)	160
HaeII	RGCGCY	1 cut(s)	105
HaeIII	GGCC	2 cut(s)	29, 113
HapII	CCGG	1 cut(s)	109
HhaI	GCGC	3 cut(s)	66, 104, 123
Hin1II	CATG	1 cut(s)	184
Hin6I	GCGC	3 cut(s)	64, 102, 121
HinP1I	GCGC	3 cut(s)	64, 102, 121
HpaII	CCGG	1 cut(s)	109
Hpy188I	TCNGA	1 cut(s)	255
Hpy188III	TCNNGA	2 cut(s)	16, 208
Hpy99I	CGWCG	4 cut(s)	17, 83, 170, 179
HpyAV	CCTTC	2 cut(s)	34, 139
HpyCH4III	ACNGT	1 cut(s)	55
HpyCH4IV	ACGT	2 cut(s)	93, 174
HpyF10VI	GCNNNNNNNGC	1 cut(s)	110
HpySE526I	ACGT	2 cut(s)	93, 174
Hsp92II	CATG	1 cut(s)	184
HspAI	GCGC	3 cut(s)	64, 102, 121
KspI	CCGCGG	1 cut(s)	160
Kzo9I	GATC	4 cut(s)	96, 183, 197, 204
LmnI	GCTCC	2 cut(s)	46, 61
LpnPI	CCDG	4 cut(s)	103, 122, 130, 226
LweI	GCATC	2 cut(s)	132, 231
MaeII	ACGT	2 cut(s)	93, 174
MalI	GATC	4 cut(s)	98, 185, 199, 206
MboI	GATC	4 cut(s)	96, 183, 197, 204
MnlI	CCTC	7 cut(s)	37, 40, 52, 80, 124, 142, 142
MspA1I	CMGCKG	1 cut(s)	159
MspI	CCGG	1 cut(s)	109
MspR9I	CCNGG	2 cut(s)	110, 118
MvaI	CCWGG	1 cut(s)	118
MvnI	CGCG	2 cut(s)	159, 189
MwoI	GCNNNNNNNGC	1 cut(s)	110
NciI	CCSGG	1 cut(s)	110
NdeII	GATC	4 cut(s)	96, 183, 197, 204
NlaIII	CATG	1 cut(s)	184
NmeAIII	GCCGAG	1 cut(s)	61
PcsI	WCGNNNNNNNCGW	2 cut(s)	171, 213
PflFI	GACNNNGTC	1 cut(s)	173
PkrI	GCNGC	1 cut(s)	161
Psp6I	CCWGG	1 cut(s)	116
PspGI	CCWGG	1 cut(s)	116
PspPI	GGNCC	2 cut(s)	111, 251
PsyI	GACNNNGTC	1 cut(s)	173
SacII	CCGCGG	1 cut(s)	160
SatI	GCNGC	1 cut(s)	160
Sau3AI	GATC	4 cut(s)	96, 183, 197, 204
Sau96I	GGNCC	2 cut(s)	111, 251
ScrFI	CCNGG	2 cut(s)	110, 118
SetI	ASST	5 cut(s)	51, 72, 96, 177, 215
SfaNI	GCATC	2 cut(s)	132, 231
Sfr303I	CCGCGG	1 cut(s)	160
SgrBI	CCGCGG	1 cut(s)	160
SinI	GGWCC	1 cut(s)	251
SsiI	CCGC	4 cut(s)	33, 157, 159, 187
StyD4I	CCNGG	2 cut(s)	108, 116
TaaI	ACNGT	1 cut(s)	55
TaiI	ACGT	2 cut(s)	96, 177
TaqI	TCGA	2 cut(s)	15, 207
TauI	GCSGC	1 cut(s)	162
TspGWI	ACGGA	1 cut(s)	67
Tth111I	GACNNNGTC	1 cut(s)	173
VpaK11BI	GGWCC	1 cut(s)	251

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.