Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr10

Orthogroup ID

OG0019733

Physical Location & Seq

Genomic Coordinates Forward (+)

2899120 .. 2899389

Gene Structure 270 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD10G1023000.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 270 bp

ATGGAGGCAACCACCCCCTGCCCCCGCGAAGAGAACGTCTACATGGCCAAGCTGGCTGAGCAAGCCGAGCGCTACGAGGAGATGGTCGAGTTCGTCGAGAAGGTCTCCGCCTCCACCGATAAAGAGGAGCTCACCGTCGAGGAGCGCAACCTCCTCTTCGTTGCCTATAAGAATGTCATCGGTGCCTGCCGTGCCTCCTGGCGCATCATCTCCTCCATTGAGCAGAAGGAAGAGAGTCGCGGCAACGACAACCACGTTGCCACGATCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005774 GO:0005794 GO:0005829 GO:0005886 GO:0007154 GO:0007165 GO:0008150 GO:0009719 GO:0009725 GO:0009741 GO:0009742 GO:0009755 GO:0009987 GO:0010033 GO:0012505 GO:0014070 GO:0016020 GO:0019222 GO:0023052 GO:0031090 GO:0032870 GO:0033993 GO:0042221 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043401 GO:0044422 GO:0044424 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0048545 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0065007 GO:0070887 GO:0071310 GO:0071367 GO:0071383 GO:0071396 GO:0071407 GO:0071495 GO:0071944 GO:0098588 GO:0098805 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

ko04011 ko04110 ko04114 ko04151 ko04390 ko04391 ko04722 ko05169 ko05203 map04011 map04110 map04114 map04151 map04390 map04391 map04722 map05169 map05203

Pfam Domains

Protein Families

14-3-3

Protein Analysis

90

Amino Acids

10.21

Weight (kDa)

4.71

Isoelectric Point (pI)

48.81

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
14-3-3	PF00244	15 - 88	2.5e-24	14-3-3 protein

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0019733)

Species	Orthologous Gene IDs
malus_domestica	MD07G1164300.v1.1 MD10G1023000.v1.1
prunus_persica	Prupe.1G302200_v2.0.a1
rosa_rugosa	Rorug02G0315400.1 Rorug02G0315500 Rorug02G0315600 Rorug02G0315700

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	182
AccI	GTMKAC	1 cut(s)	39
AccII	CGCG	2 cut(s)	27, 240
AciI	CCGC	3 cut(s)	25, 108, 240
AcoI	YGGCCR	1 cut(s)	45
AfeI	AGCGCT	1 cut(s)	71
AjnI	CCWGG	1 cut(s)	197
AluBI	AGCT	2 cut(s)	52, 130
AluI	AGCT	2 cut(s)	52, 130
Alw21I	GWGCWC	1 cut(s)	132
Alw26I	GTCTC	1 cut(s)	109
Aor51HI	AGCGCT	1 cut(s)	71
AoxI	GGCC	1 cut(s)	45
ArsI	GACNNNNNNTTYG	2 cut(s)	21, 53
AspLEI	GCGC	3 cut(s)	72, 147, 204
AsuHPI	GGTGA	1 cut(s)	124
BalI	TGGCCA	1 cut(s)	47
BanI	GGYRCC	1 cut(s)	182
BanII	GRGCYC	1 cut(s)	132
Bbv12I	GWGCWC	1 cut(s)	132
BccI	CCATC	1 cut(s)	76
BceAI	ACGGC	1 cut(s)	174
BciT130I	CCWGG	1 cut(s)	199
BcoDI	GTCTC	1 cut(s)	109
BfoI	RGCGCY	1 cut(s)	73
BglI	GCCNNNNNGGC	1 cut(s)	53
BisI	GCNGC	1 cut(s)	241
BlpI	GCTNAGC	1 cut(s)	57
BlsI	GCNGC	1 cut(s)	242
Bme1390I	CCNGG	1 cut(s)	199
BmiI	GGNNCC	1 cut(s)	184
BmrFI	CCNGG	1 cut(s)	199
BmsI	GCATC	1 cut(s)	213
BplI	GAGNNNNNCTC	2 cut(s)	89, 121
Bpu1102I	GCTNAGC	1 cut(s)	57
BsaI	GGTCTC	1 cut(s)	109
BseBI	CCWGG	1 cut(s)	199
BseMII	CTCAG	1 cut(s)	48
BseRI	GAGGAG	5 cut(s)	92, 140, 143, 155, 202
Bsh1236I	CGCG	2 cut(s)	27, 240
BshFI	GGCC	1 cut(s)	47
BshNI	GGYRCC	1 cut(s)	182
BsiHKAI	GWGCWC	1 cut(s)	132
BsmAI	GTCTC	1 cut(s)	109
BsnI	GGCC	1 cut(s)	47
Bso31I	GGTCTC	1 cut(s)	109
Bsp1286I	GDGCHC	1 cut(s)	132
Bsp143I	GATC	1 cut(s)	264
Bsp1720I	GCTNAGC	1 cut(s)	57
BspACI	CCGC	3 cut(s)	25, 108, 240
BspANI	GGCC	1 cut(s)	47
BspCNI	CTCAG	1 cut(s)	49
BspFNI	CGCG	2 cut(s)	27, 240
BspLI	GGNNCC	1 cut(s)	184
BspT107I	GGYRCC	1 cut(s)	182
BspTNI	GGTCTC	1 cut(s)	109
BssMI	GATC	1 cut(s)	264
Bst2UI	CCWGG	1 cut(s)	199
Bst4CI	ACNGT	1 cut(s)	136
Bst6I	CTCTTC	3 cut(s)	24, 161, 225
BstC8I	GCNNGC	3 cut(s)	54, 63, 187
BstDEI	CTNAG	1 cut(s)	57
BstFNI	CGCG	2 cut(s)	27, 240
BstH2I	RGCGCY	1 cut(s)	73
BstHHI	GCGC	3 cut(s)	72, 147, 204
BstKTI	GATC	1 cut(s)	267
BstMAI	GTCTC	1 cut(s)	109
BstMBI	GATC	1 cut(s)	264
BstMWI	GCNNNNNNNGC	5 cut(s)	53, 58, 62, 67, 191
BstNI	CCWGG	1 cut(s)	199
BstSCI	CCNGG	1 cut(s)	197
BstUI	CGCG	2 cut(s)	27, 240
BsuRI	GGCC	1 cut(s)	47
Cac8I	GCNNGC	3 cut(s)	54, 63, 187
CfoI	GCGC	3 cut(s)	72, 147, 204
CviAII	CATG	1 cut(s)	43
CviJI	RGCY	5 cut(s)	47, 52, 56, 65, 130
CviKI_1	RGCY	5 cut(s)	47, 52, 56, 65, 130
DdeI	CTNAG	1 cut(s)	57
DpnI	GATC	1 cut(s)	266
DpnII	GATC	1 cut(s)	264
EaeI	YGGCCR	1 cut(s)	45
Eam1104I	CTCTTC	3 cut(s)	24, 161, 225
EarI	CTCTTC	3 cut(s)	24, 161, 225
EciI	GGCGGA	1 cut(s)	97
Ecl136II	GAGCTC	1 cut(s)	130
Eco24I	GRGCYC	1 cut(s)	132
Eco31I	GGTCTC	1 cut(s)	109
Eco47III	AGCGCT	1 cut(s)	71
Eco53kI	GAGCTC	1 cut(s)	130
EcoICRI	GAGCTC	1 cut(s)	130
EcoRII	CCWGG	1 cut(s)	197
EcoT38I	GRGCYC	1 cut(s)	132
FaeI	CATG	1 cut(s)	46
FaiI	YATR	2 cut(s)	44, 168
FatI	CATG	1 cut(s)	42
FauI	CCCGC	1 cut(s)	32
FblI	GTMKAC	1 cut(s)	39
Fnu4HI	GCNGC	1 cut(s)	241
FriOI	GRGCYC	1 cut(s)	132
Fsp4HI	GCNGC	1 cut(s)	241
GlaI	GCGC	3 cut(s)	71, 146, 203
GluI	GCNGC	1 cut(s)	241
HaeII	RGCGCY	1 cut(s)	73
HaeIII	GGCC	1 cut(s)	47
HhaI	GCGC	3 cut(s)	72, 147, 204
Hin1II	CATG	1 cut(s)	46
Hin6I	GCGC	3 cut(s)	70, 145, 202
HinP1I	GCGC	3 cut(s)	70, 145, 202
HinfI	GANTC	1 cut(s)	235
HphI	GGTGA	1 cut(s)	124
Hpy166II	GTNNAC	1 cut(s)	40
Hpy188I	TCNGA	1 cut(s)	269
Hpy188III	TCNNGA	1 cut(s)	97
Hpy8I	GTNNAC	1 cut(s)	40
Hpy99I	CGWCG	2 cut(s)	98, 140
HpyAV	CCTTC	2 cut(s)	94, 220
HpyCH4III	ACNGT	1 cut(s)	136
HpyCH4IV	ACGT	2 cut(s)	36, 255
HpyF10VI	GCNNNNNNNGC	5 cut(s)	53, 58, 62, 67, 191
HpyF3I	CTNAG	1 cut(s)	57
HpySE526I	ACGT	2 cut(s)	36, 255
Hsp92II	CATG	1 cut(s)	46
HspAI	GCGC	3 cut(s)	70, 145, 202
Kzo9I	GATC	1 cut(s)	264
LmnI	GCTCC	2 cut(s)	127, 142
LpnPI	CCDG	5 cut(s)	31, 38, 184, 199, 211
LweI	GCATC	1 cut(s)	213
MaeII	ACGT	2 cut(s)	36, 255
MalI	GATC	1 cut(s)	266
MboI	GATC	1 cut(s)	264
MboII	GAAGA	3 cut(s)	41, 148, 242
MhlI	GDGCHC	1 cut(s)	132
MlsI	TGGCCA	1 cut(s)	47
MluNI	TGGCCA	1 cut(s)	47
MlyI	GAGTC	1 cut(s)	244
MnlI	CCTC	8 cut(s)	70, 118, 121, 133, 161, 164, 205, 223
Mox20I	TGGCCA	1 cut(s)	47
MscI	TGGCCA	1 cut(s)	47
Msp20I	TGGCCA	1 cut(s)	47
MspR9I	CCNGG	1 cut(s)	199
MvaI	CCWGG	1 cut(s)	199
MvnI	CGCG	2 cut(s)	27, 240
MwoI	GCNNNNNNNGC	5 cut(s)	53, 58, 62, 67, 191
NdeII	GATC	1 cut(s)	264
NlaIII	CATG	1 cut(s)	46
NlaIV	GGNNCC	1 cut(s)	184
NmeAIII	GCCGAG	1 cut(s)	91
PcsI	WCGNNNNNNNCGW	2 cut(s)	93, 252
PkrI	GCNGC	1 cut(s)	242
PleI	GAGTC	1 cut(s)	243
PpsI	GAGTC	1 cut(s)	243
Psp124BI	GAGCTC	1 cut(s)	132
Psp6I	CCWGG	1 cut(s)	197
PspGI	CCWGG	1 cut(s)	197
PspN4I	GGNNCC	1 cut(s)	184
SacI	GAGCTC	1 cut(s)	132
SatI	GCNGC	1 cut(s)	241
Sau3AI	GATC	1 cut(s)	264
SchI	GAGTC	1 cut(s)	244
ScrFI	CCNGG	1 cut(s)	199
SduI	GDGCHC	1 cut(s)	132
SetI	ASST	6 cut(s)	39, 54, 105, 132, 153, 258
SfaNI	GCATC	1 cut(s)	213
SsiI	CCGC	3 cut(s)	25, 108, 240
SstI	GAGCTC	1 cut(s)	132
StyD4I	CCNGG	1 cut(s)	197
TaaI	ACNGT	1 cut(s)	136
TaiI	ACGT	2 cut(s)	39, 258
TaqI	TCGA	3 cut(s)	87, 96, 138
TauI	GCSGC	1 cut(s)	243
XmiI	GTMKAC	1 cut(s)	39

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.