Rorug02G0315700

Belongs to the 14-3-3 family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000002
OG0019733
Physical Location & Seq
Forward (+)
38411499 .. 38411705
207 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug02G0315700.1

Sequence Viewer

Length: 207 bp
ATGGTTATTATCTTGTTGATGGAATATATCCGAGGTTGTCCACTTTTGTCAAAACAATATCAAACCCCAGAACAGAAGAGGAGAAACACTTTTGTAAACAATAAGAGGCTTATCGCAAAGATGTGGAGAGGTGTTTCGATATCCTCCAATCTCGATGGGTCATACTACGTCAAGGTTGCTAAGTTGTTTAAACTGGAGGATCTTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000075 GO:0000077 GO:0000166 GO:0001505 GO:0001932 GO:0001933 GO:0003674 GO:0003676 GO:0003677 GO:0003824 GO:0004620 GO:0004623 GO:0004857 GO:0004860 GO:0005488 GO:0005524 GO:0005575 GO:0005618 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005739 GO:0005794 GO:0005829 GO:0005886 GO:0005911 GO:0006082 GO:0006469 GO:0006520 GO:0006568 GO:0006576 GO:0006586 GO:0006587 GO:0006588 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0008144 GO:0008150 GO:0008152 GO:0008426 GO:0009058 GO:0009072 GO:0009308 GO:0009506 GO:0009507 GO:0009536 GO:0009892 GO:0009893 GO:0009987 GO:0010035 GO:0010038 GO:0010468 GO:0010563 GO:0010605 GO:0012505 GO:0016020 GO:0016298 GO:0016787 GO:0016788 GO:0017076 GO:0018130 GO:0018958 GO:0019207 GO:0019210 GO:0019220 GO:0019222 GO:0019438 GO:0019752 GO:0019887 GO:0030054 GO:0030234 GO:0030291 GO:0030312 GO:0030554 GO:0031323 GO:0031324 GO:0031399 GO:0031400 GO:0031570 GO:0032268 GO:0032269 GO:0032553 GO:0032555 GO:0032559 GO:0032768 GO:0032770 GO:0033554 GO:0033673 GO:0034641 GO:0035639 GO:0036094 GO:0042133 GO:0042136 GO:0042221 GO:0042325 GO:0042326 GO:0042427 GO:0042428 GO:0042430 GO:0042435 GO:0043085 GO:0043086 GO:0043167 GO:0043168 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0043549 GO:0044092 GO:0044093 GO:0044106 GO:0044237 GO:0044238 GO:0044249 GO:0044271 GO:0044281 GO:0044424 GO:0044444 GO:0044464 GO:0044877 GO:0045786 GO:0045859 GO:0045936 GO:0046189 GO:0046483 GO:0046686 GO:0048518 GO:0048519 GO:0048523 GO:0050789 GO:0050790 GO:0050794 GO:0050896 GO:0051171 GO:0051172 GO:0051174 GO:0051246 GO:0051248 GO:0051338 GO:0051341 GO:0051348 GO:0051353 GO:0051716 GO:0051726 GO:0052689 GO:0055044 GO:0060255 GO:0065007 GO:0065008 GO:0065009 GO:0071704 GO:0071900 GO:0071901 GO:0071944 GO:0080090 GO:0097159 GO:0097164 GO:0097367 GO:0098772 GO:1901160 GO:1901162 GO:1901265 GO:1901360 GO:1901362 GO:1901363 GO:1901564 GO:1901566 GO:1901576 GO:1901605 GO:1901615 GO:1901617
KEGG Pathways
Metabolic & Signaling
ko04011 ko04110 ko04114 ko04142 ko04151 ko04390 ko04391 ko04722 ko05169 ko05203 map04011 map04110 map04114 map04142 map04151 map04390 map04391 map04722 map05169 map05203
Pfam Domains
Protein Families
14-3-3

Protein Analysis

68

Amino Acids

8.01

Weight (kDa)

9.93

Isoelectric Point (pI)

50.55

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0019733)

Species Orthologous Gene IDs
malus_domestica MD07G1164300.v1.1 MD10G1023000.v1.1
prunus_persica Prupe.1G302200_v2.0.a1
rosa_rugosa Rorug02G0315400.1 Rorug02G0315500 Rorug02G0315600 Rorug02G0315700

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
BccI CCATC 2 cut(s) 13, 149
BsaJI CCNNGG 1 cut(s) 31
Bse1I ACTGG 1 cut(s) 198
BseDI CCNNGG 1 cut(s) 31
BseNI ACTGG 1 cut(s) 198
BseRI GAGGAG 1 cut(s) 94
Bsp143I GATC 1 cut(s) 199
BsrI ACTGG 1 cut(s) 198
BssECI CCNNGG 1 cut(s) 31
BssMI GATC 1 cut(s) 199
Bst6I CTCTTC 1 cut(s) 71
BstDEI CTNAG 1 cut(s) 180
BstKTI GATC 1 cut(s) 202
BstMBI GATC 1 cut(s) 199
BstX2I RGATCY 1 cut(s) 199
BstYI RGATCY 1 cut(s) 199
CviJI RGCY 1 cut(s) 109
CviKI_1 RGCY 1 cut(s) 109
DdeI CTNAG 1 cut(s) 180
DpnI GATC 1 cut(s) 201
DpnII GATC 1 cut(s) 199
DraI TTTAAA 1 cut(s) 190
Eam1104I CTCTTC 1 cut(s) 71
EarI CTCTTC 1 cut(s) 71
Eco32I GATATC 1 cut(s) 141
EcoRV GATATC 1 cut(s) 141
FaiI YATR 2 cut(s) 27, 163
Hpy166II GTNNAC 2 cut(s) 41, 97
Hpy188I TCNGA 1 cut(s) 32
Hpy188III TCNNGA 1 cut(s) 152
Hpy8I GTNNAC 2 cut(s) 41, 97
HpyCH4IV ACGT 1 cut(s) 168
HpyF3I CTNAG 1 cut(s) 180
HpySE526I ACGT 1 cut(s) 168
Kzo9I GATC 1 cut(s) 199
LpnPI CCDG 2 cut(s) 81, 179
MaeII ACGT 1 cut(s) 168
MalI GATC 1 cut(s) 201
MboI GATC 1 cut(s) 199
MboII GAAGA 1 cut(s) 88
MflI RGATCY 1 cut(s) 199
MnlI CCTC 6 cut(s) 26, 72, 99, 122, 154, 190
MseI TTAA 1 cut(s) 189
MssI GTTTAAAC 1 cut(s) 190
NdeII GATC 1 cut(s) 199
PmeI GTTTAAAC 1 cut(s) 190
PsuI RGATCY 1 cut(s) 199
SaqAI TTAA 1 cut(s) 189
Sau3AI GATC 1 cut(s) 199
SetI ASST 4 cut(s) 37, 133, 171, 177
SgeI CNNG 5 cut(s) 25, 44, 80, 164, 184
TaiI ACGT 1 cut(s) 171
TaqI TCGA 2 cut(s) 137, 153
Tru1I TTAA 1 cut(s) 189
Tru9I TTAA 1 cut(s) 189
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.