Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr07

Orthogroup ID

OG0011054

Physical Location & Seq

Genomic Coordinates Reverse (-)

24526182 .. 24529967

Gene Structure 3786 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD07G1170400.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1896 bp

ATGGGTCCAACGGGAGAAGATACGAGCAGGTCAGTAGTGAGTCAACTCGCCGAGTCGGTGAAGGCGATTTCCGAGTTGCCCGAGTGCCGAAACGCGTTCAGGAAGATGTACGGCAACTTCGTGCGGAGAGTCAAGCTTTTGAGTCCTCTGTTCGAGGAATTGAGGGATGGCAATATACCGCTGGGAGAAGGAGAAGTTGTAGCTCTGGAGTCGCTGGGGGAGGCTTTGAATTCGGCAAAGCAGCTCATCAAGTCGGTCAACCAAGGGAGCAAGCTTTATCAGGCTTTGCAGAGGGACGAGATTATTGATAAGTTTCACCAAATGACGGTAAAAATTGAAGCAGCATTGAGCAAAATTCCTTATGAGAAATTTGACACGTCAGAGGAAGTTTGCGAACAGATTGAACTAGTGCATGCTCAATTCAAAAGAGCGAAAGAAAAAAAGGACTGCCTTGACTCACAACTAGAGATGGATTTAGCCGTAGCAGTAAGAGGCACAGATCTTGACCCTGCAGTAATAAAAAGACTTTCGGAGAAGCTGTACCTCAGAACCATCAACGATCTAAAGCAAGAGTCACTTGCTTTCCATGAATGGGTTATCGCAAGTGACGGAGATCTAGGGGACCATTTTGAAAAGATGCAATCTCTGCTTAAGAAGCTAAAGGACCTAGTGCTTATGGAAAACCCAGAAGCCGACAACTCAGAATGTGACAAGAGCACGGTCAAGCATAGATCTCCTGTCATACCAGATGATTTCCGGTGTCCAATATCACTAGAATTAATGAAGGATCCTGTGATTGTCTCAACTGGACAGACATACGAAAGATCGTGTATTCAGAAGTGGTTGGATGCAGGACACAAAACTTGTCCCAAAACACAGCAGACATTGTTGCACACAGCCATAACACCAAACTATGTTTTGAAGAGTCTAATTGCTTTGTGGTGTGAAAGCAATGGTGTTGAGCTGCCCAAAAAGCAAGGGAATGGTAAAAACAGAAAAGCAGGAAGCAGTATTTCAGACTGTGACCGTGCTTCTATTGCTTCATTGTTAGAAAAACTAGCAAAGGGGAACTCGGAAGAACAAAGAGCAGCTGCTGGTGAACTCCGCTTGCTGGCAAAGAGGAATGCAGATAATAGAGTGTGTATTGCTGAGGCAGGAGCCATTCCTCTCCTTGTTGAGCTTTTGTCGTCCGCTGATTCTCGGACCCAAGAGCATGCCGTTACAGCACTTCTCAACCTCTCGATAAATGAGAGCAACAAGGGAGGGATTGTAAATGCTGGAGCTATACCCGATATAGTAGATGTTTTGAAAAATGGCAGCATGGAGGCTAGAGAAAATGCAGCTGCAACTCTTTTCAGTTTGTCTGTTGTAGATGAAAACAAGGTGGCAATTGGAGCTGCTGGAGCTATCCCAGCCCTTATAAAATTGCTGTGCGAGGGGACACCGAGAGGGAAAAAGGATGCAGCTACCGCTATTTTTAATCTTTCAATCTATCAGGGAAACAAGGCCAGGGCTGTAAGGGCAGGTATTGTGGCCCCACTGATGAGATTGCTCAAGGACGCGGGAAGCGGGATGATGGATGAAGCGCTAGCGATCCTGGCCATTCTGGCTAGCCACCAAGAAGGGAAGGCAGCAATTGCTCAAGCTGAGCCAATCCCAGTTTTAGTGGAAGTTATAAGAACTGGTTTCCCACGCAACCGGGAGAATGCTGCTGCTGTGTTATGGTCGTTATGCACAGGTGATTTGCAGCAGTTGAAACTAGCAAGGGAACTCGGTGCGGAAGAGGCAATGAAGGAATTGTCGGAAAATGGCACTGAGAGGGCCAAGAGAAAAGCTGTAAGTGTTTTAGAGCTGCTTCAACGCGTCGACGATGATTTTATTCCCCAACAATGCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004842 GO:0005102 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0006464 GO:0006807 GO:0008150 GO:0008152 GO:0009987 GO:0016567 GO:0016740 GO:0019538 GO:0019787 GO:0032446 GO:0033612 GO:0036211 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0070647 GO:0070696 GO:0071704 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Arm U-box

Protein Analysis

632

Amino Acids

68.9

Weight (kDa)

5.82

Isoelectric Point (pI)

33.08

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PUB2_N	PF25240	21 - 126	7.7e-06	PUB2-like, N-terminal domain
PUB10_N	PF25368	34 - 145	2.5e-33	PUB10-like, N-terminal domain
U-box	PF04564	248 - 318	2.1e-21	U-box domain
ARM_PUB	PF25598	346 - 622	1e-25	Plant U-box protein ARM repeat region
ARM_ARMC5	PF24768	350 - 520	6.6e-10	ARMC5
Arm	PF00514	375 - 414	1.7e-10	Armadillo/beta-catenin-like repeat
ARM_ARMC5	PF24768	412 - 590	1.1e-08	ARMC5
Arm	PF00514	458 - 496	7.2e-07	Armadillo/beta-catenin-like repeat

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0011054)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G54850
fragaria_vesca	FvH4_7g18840 FvH4_7g18840 FvH4_7g18840
malus_domestica	MD01G1103500.v1.1 MD07G1170400.v1.1
prunus_persica	Prupe.2G209300_v2.0.a1
pyrus_communis	pycom01g13000 pycom07g16430
rosa_chinensis	RchiOBHm_Chr1g0362651
rosa_laevigata	RLG00000027631
rosa_multiflora	Rmu_sc0000046.1_g000030
rosa_roxburghii	Rroxscaffold_4G00293880
rosa_rugosa	Rorug01G0300300.1 Rorug01G0300400
rosa_samantha	Rh1AG308900 Rh1BG272700 Rh1CG290000 Rh1DG303200
rosa_wichuraiana	Rw1G027460

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	1421, 1676
Acc36I	ACCTGC	2 cut(s)	18, 1514
AccI	GTMKAC	1 cut(s)	1866
AccII	CGCG	3 cut(s)	95, 1562, 1863
AciI	CCGC	8 cut(s)	124, 179, 1105, 1191, 1470, 1562, 1569, 1778
AclWI	GGATC	3 cut(s)	782, 795, 1588
AcoI	YGGCCR	1 cut(s)	1599
AcsI	RAATTY	3 cut(s)	229, 354, 368
AfaI	GTAC	2 cut(s)	110, 542
AfeI	AGCGCT	1 cut(s)	1587
AfiI	CCNNNNNNNGG	3 cut(s)	325, 592, 1111
AflII	CTTAAG	1 cut(s)	650
AflIII	ACRYGT	3 cut(s)	93, 375, 1861
AhlI	ACTAGT	1 cut(s)	406
AjiI	CACGTC	1 cut(s)	378
AjnI	CCWGG	2 cut(s)	1508, 1596
Alw21I	GWGCWC	1 cut(s)	719
Alw26I	GTCTC	1 cut(s)	805
AlwI	GGATC	3 cut(s)	782, 795, 1588
AlwNI	CAGNNNCTG	1 cut(s)	1094
Ama87I	CYCGRG	1 cut(s)	80
Aor51HI	AGCGCT	1 cut(s)	1587
AoxI	GGCC	4 cut(s)	1506, 1533, 1599, 1821
ApoI	RAATTY	3 cut(s)	229, 354, 368
AseI	ATTAAT	1 cut(s)	779
AspLEI	GCGC	1 cut(s)	1588
AspS9I	GGNCC	6 cut(s)	5, 622, 664, 1203, 1534, 1821
AsuC2I	CCSGG	1 cut(s)	1700
AsuHPI	GGTGA	4 cut(s)	70, 308, 1109, 1751
AsuNHI	GCTAGC	2 cut(s)	1588, 1610
AvaI	CYCGRG	1 cut(s)	80
AvaII	GGWCC	4 cut(s)	5, 622, 664, 1203
BalI	TGGCCA	1 cut(s)	1601
BamHI	GGATCC	1 cut(s)	787
BarI	GAAGNNNNNNTAC	2 cut(s)	101, 133
Bbv12I	GWGCWC	1 cut(s)	719
BbvCI	CCTCAGC	1 cut(s)	1149
BccI	CCATC	4 cut(s)	161, 463, 560, 1570
BceAI	ACGGC	3 cut(s)	127, 464, 1202
BciT130I	CCWGG	2 cut(s)	1510, 1598
BcnI	CCSGG	1 cut(s)	1700
BcoDI	GTCTC	1 cut(s)	805
BcuI	ACTAGT	1 cut(s)	406
BfmI	CTRYAG	1 cut(s)	510
BfoI	RGCGCY	1 cut(s)	1589
BfrI	CTTAAG	1 cut(s)	650
BfuAI	ACCTGC	2 cut(s)	18, 1514
BglI	GCCNNNNNGGC	1 cut(s)	1607
BglII	AGATCT	3 cut(s)	499, 613, 731
BlpI	GCTNAGC	1 cut(s)	1647
Bme1390I	CCNGG	3 cut(s)	1510, 1598, 1700
Bme18I	GGWCC	4 cut(s)	5, 622, 664, 1203
BmeT110I	CYCGRG	1 cut(s)	80
BmgBI	CACGTC	1 cut(s)	378
BmgT120I	GGNCC	6 cut(s)	5, 622, 664, 1203, 1534, 1821
BmiI	GGNNCC	6 cut(s)	6, 623, 789, 1159, 1205, 1536
BmrFI	CCNGG	3 cut(s)	1510, 1598, 1700
BmrI	ACTGGG	1 cut(s)	1652
BmsI	GCATC	3 cut(s)	627, 838, 1450
BmtI	GCTAGC	2 cut(s)	1592, 1614
BmuI	ACTGGG	1 cut(s)	1652
BpmI	CTGGAG	3 cut(s)	227, 1299, 1422
Bpu10I	CCTNAGC	1 cut(s)	1149
Bpu1102I	GCTNAGC	1 cut(s)	1647
BpuEI	CTTGAG	2 cut(s)	1538, 1626
BpuMI	CCSGG	1 cut(s)	1700
BsaJI	CCNNGG	2 cut(s)	262, 1509
BsaWI	WCCGGW	1 cut(s)	756
BsaXI	ACNNNNNCTCC	6 cut(s)	183, 213, 524, 554, 1254, 1284
Bsc4I	CCNNNNNNNGG	3 cut(s)	325, 592, 1111
Bse1I	ACTGG	3 cut(s)	811, 1658, 1687
Bse3DI	GCAATG	2 cut(s)	958, 1794
BseBI	CCWGG	2 cut(s)	1510, 1598
BseDI	CCNNGG	2 cut(s)	262, 1509
BseGI	GGATG	5 cut(s)	172, 853, 1465, 1578, 1585
BseLI	CCNNNNNNNGG	3 cut(s)	325, 592, 1111
BseMI	GCAATG	2 cut(s)	958, 1794
BseMII	CTCAG	5 cut(s)	559, 714, 1140, 1638, 1806
BseNI	ACTGG	3 cut(s)	811, 1658, 1687
BseYI	CCCAGC	3 cut(s)	181, 214, 1411
Bsh1236I	CGCG	3 cut(s)	95, 1562, 1863
BshFI	GGCC	4 cut(s)	1508, 1535, 1601, 1823
BsiHKAI	GWGCWC	1 cut(s)	719
BsiHKCI	CYCGRG	1 cut(s)	80
BsiSI	CCGG	2 cut(s)	757, 1699
BslFI	GGGAC	4 cut(s)	308, 635, 852, 1453
BslI	CCNNNNNNNGG	3 cut(s)	325, 592, 1111
BsmAI	GTCTC	1 cut(s)	805
BsmFI	GGGAC	4 cut(s)	308, 635, 852, 1453
BsmI	GAATGC	2 cut(s)	1129, 1711
BsnI	GGCC	4 cut(s)	1508, 1535, 1601, 1823
BsoBI	CYCGRG	1 cut(s)	80
Bsp1286I	GDGCHC	1 cut(s)	719
Bsp143I	GATC	7 cut(s)	499, 559, 613, 731, 787, 824, 1593
Bsp1720I	GCTNAGC	1 cut(s)	1647
BspACI	CCGC	8 cut(s)	124, 179, 1105, 1191, 1470, 1562, 1569, 1778
BspANI	GGCC	4 cut(s)	1508, 1535, 1601, 1823
BspCNI	CTCAG	5 cut(s)	558, 713, 1141, 1639, 1807
BspFNI	CGCG	3 cut(s)	95, 1562, 1863
BspLI	GGNNCC	6 cut(s)	6, 623, 789, 1159, 1205, 1536
BspMAI	CTGCAG	1 cut(s)	514
BspMI	ACCTGC	2 cut(s)	18, 1514
BspOI	GCTAGC	2 cut(s)	1592, 1614
BspPI	GGATC	3 cut(s)	782, 795, 1588
BspTI	CTTAAG	1 cut(s)	650
BsrDI	GCAATG	2 cut(s)	958, 1794
BsrI	ACTGG	3 cut(s)	811, 1658, 1687
BssECI	CCNNGG	2 cut(s)	262, 1509
BssMI	GATC	7 cut(s)	499, 559, 613, 731, 787, 824, 1593
BssT1I	CCWWGG	1 cut(s)	262
Bst2UI	CCWGG	2 cut(s)	1510, 1598
Bst4CI	ACNGT	4 cut(s)	328, 721, 1022, 1028
Bst6I	CTCTTC	2 cut(s)	917, 1776
BstAFI	CTTAAG	1 cut(s)	650
BstAPI	GCANNNNNTGC	2 cut(s)	646, 1637
BstC8I	GCNNGC	7 cut(s)	272, 414, 1109, 1113, 1215, 1590, 1612
BstDEI	CTNAG	5 cut(s)	545, 700, 1149, 1647, 1815
BstF5I	GGATG	5 cut(s)	172, 853, 1465, 1578, 1585
BstFNI	CGCG	3 cut(s)	95, 1562, 1863
BstH2I	RGCGCY	1 cut(s)	1589
BstHHI	GCGC	1 cut(s)	1588
BstKTI	GATC	7 cut(s)	502, 562, 616, 734, 790, 827, 1596
BstMAI	GTCTC	1 cut(s)	805
BstMBI	GATC	7 cut(s)	499, 559, 613, 731, 787, 824, 1593
BstNI	CCWGG	2 cut(s)	1510, 1598
BstNSI	RCATGY	2 cut(s)	416, 1217
BstSCI	CCNGG	3 cut(s)	1508, 1596, 1698
BstSFI	CTRYAG	1 cut(s)	510
BstUI	CGCG	3 cut(s)	95, 1562, 1863
BstX2I	RGATCY	4 cut(s)	499, 613, 731, 787
BstYI	RGATCY	4 cut(s)	499, 613, 731, 787
BsuRI	GGCC	4 cut(s)	1508, 1535, 1601, 1823
BtrI	CACGTC	1 cut(s)	378
BtsCI	GGATG	5 cut(s)	172, 853, 1465, 1578, 1585
BtsIMutI	CAGTG	2 cut(s)	1538, 1812
BveI	ACCTGC	2 cut(s)	18, 1514
Cac8I	GCNNGC	7 cut(s)	272, 414, 1109, 1113, 1215, 1590, 1612
CaiI	CAGNNNCTG	1 cut(s)	1094
CfoI	GCGC	1 cut(s)	1588
Cfr13I	GGNCC	6 cut(s)	5, 622, 664, 1203, 1534, 1821
CseI	GACGC	2 cut(s)	1568, 1852
Csp6I	GTAC	2 cut(s)	109, 541
CviAII	CATG	4 cut(s)	413, 587, 1214, 1321
CviQI	GTAC	2 cut(s)	109, 541
DdeI	CTNAG	5 cut(s)	545, 700, 1149, 1647, 1815
DpnI	GATC	7 cut(s)	501, 561, 615, 733, 789, 826, 1595
DpnII	GATC	7 cut(s)	499, 559, 613, 731, 787, 824, 1593
EaeI	YGGCCR	1 cut(s)	1599
Eam1104I	CTCTTC	2 cut(s)	917, 1776
EarI	CTCTTC	2 cut(s)	917, 1776
Eco130I	CCWWGG	1 cut(s)	262
Eco47I	GGWCC	4 cut(s)	5, 622, 664, 1203
Eco47III	AGCGCT	1 cut(s)	1587
Eco88I	CYCGRG	1 cut(s)	80
EcoO109I	RGGNCCY	1 cut(s)	664
EcoRI	GAATTC	1 cut(s)	229
EcoRII	CCWGG	2 cut(s)	1508, 1596
EcoT14I	CCWWGG	1 cut(s)	262
ErhI	CCWWGG	1 cut(s)	262
FaeI	CATG	4 cut(s)	416, 590, 1217, 1324
FalI	AAGNNNNNCTT	2 cut(s)	561, 593
FaqI	GGGAC	4 cut(s)	308, 635, 852, 1453
FatI	CATG	4 cut(s)	412, 586, 1213, 1320
FauI	CCCGC	2 cut(s)	1555, 1562
FblI	GTMKAC	1 cut(s)	1866
FokI	GGATG	5 cut(s)	179, 860, 1472, 1585, 1592
GlaI	GCGC	1 cut(s)	1587
GsaI	CCCAGC	3 cut(s)	185, 218, 1415
GsuI	CTGGAG	3 cut(s)	227, 1299, 1422
HaeII	RGCGCY	1 cut(s)	1589
HaeIII	GGCC	4 cut(s)	1508, 1535, 1601, 1823
HapII	CCGG	2 cut(s)	757, 1699
HgaI	GACGC	2 cut(s)	1568, 1852
HhaI	GCGC	1 cut(s)	1588
Hin1II	CATG	4 cut(s)	416, 590, 1217, 1324
Hin6I	GCGC	1 cut(s)	1586
HinP1I	GCGC	1 cut(s)	1586
HincII	GTYRAC	3 cut(s)	44, 259, 1867
HindII	GTYRAC	3 cut(s)	44, 259, 1867
HindIII	AAGCTT	2 cut(s)	134, 272
HinfI	GANTC	9 cut(s)	40, 53, 129, 142, 209, 455, 572, 925, 1196
HpaII	CCGG	2 cut(s)	757, 1699
HphI	GGTGA	4 cut(s)	70, 308, 1109, 1751
Hpy166II	GTNNAC	4 cut(s)	44, 259, 1100, 1867
Hpy188III	TCNNGA	4 cut(s)	100, 206, 503, 1240
Hpy8I	GTNNAC	4 cut(s)	44, 259, 1100, 1867
Hpy99I	CGWCG	2 cut(s)	1868, 1871
HpyAV	CCTTC	6 cut(s)	55, 182, 778, 1616, 1621, 1786
HpyCH4III	ACNGT	4 cut(s)	328, 721, 1022, 1028
HpyCH4IV	ACGT	1 cut(s)	377
HpyF3I	CTNAG	5 cut(s)	545, 700, 1149, 1647, 1815
HpySE526I	ACGT	1 cut(s)	377
Hsp92II	CATG	4 cut(s)	416, 590, 1217, 1324
HspAI	GCGC	1 cut(s)	1586
Kzo9I	GATC	7 cut(s)	499, 559, 613, 731, 787, 824, 1593
LmnI	GCTCC	5 cut(s)	267, 1157, 1280, 1394, 1403
LweI	GCATC	3 cut(s)	627, 838, 1450
MaeII	ACGT	1 cut(s)	377
MaeIII	GTNAC	5 cut(s)	573, 605, 707, 1022, 1219
MalI	GATC	7 cut(s)	501, 561, 615, 733, 789, 826, 1595
MboI	GATC	7 cut(s)	499, 559, 613, 731, 787, 824, 1593
MboII	GAAGA	5 cut(s)	29, 115, 934, 1088, 1793
MfeI	CAATTG	2 cut(s)	1389, 1635
MflI	RGATCY	4 cut(s)	499, 613, 731, 787
MhlI	GDGCHC	1 cut(s)	719
MlsI	TGGCCA	1 cut(s)	1601
MluI	ACGCGT	2 cut(s)	93, 1861
MluNI	TGGCCA	1 cut(s)	1601
MlyI	GAGTC	8 cut(s)	49, 62, 138, 151, 218, 449, 581, 934
MmeI	TCCRAC	3 cut(s)	32, 825, 1782
Mox20I	TGGCCA	1 cut(s)	1601
MscI	TGGCCA	1 cut(s)	1601
MseI	TTAA	3 cut(s)	651, 779, 1479
Msp20I	TGGCCA	1 cut(s)	1601
MspA1I	CMGCKG	4 cut(s)	181, 1091, 1193, 1343
MspCI	CTTAAG	1 cut(s)	650
MspI	CCGG	2 cut(s)	757, 1699
MspR9I	CCNGG	3 cut(s)	1510, 1598, 1700
MunI	CAATTG	2 cut(s)	1389, 1635
Mva1269I	GAATGC	2 cut(s)	1129, 1711
MvaI	CCWGG	2 cut(s)	1510, 1598
MvnI	CGCG	3 cut(s)	95, 1562, 1863
NciI	CCSGG	1 cut(s)	1700
NdeII	GATC	7 cut(s)	499, 559, 613, 731, 787, 824, 1593
NheI	GCTAGC	2 cut(s)	1588, 1610
NlaIII	CATG	4 cut(s)	416, 590, 1217, 1324
NlaIV	GGNNCC	6 cut(s)	6, 623, 789, 1159, 1205, 1536
NmeAIII	GCCGAG	1 cut(s)	76
NmuCI	GTSAC	4 cut(s)	573, 605, 707, 1022
NspI	RCATGY	2 cut(s)	416, 1217
PaeI	GCATGC	2 cut(s)	416, 1217
PcsI	WCGNNNNNNNCGW	2 cut(s)	62, 117
PctI	GAATGC	2 cut(s)	1129, 1711
PfeI	GAWTC	1 cut(s)	1196
PleI	GAGTC	8 cut(s)	48, 61, 137, 150, 217, 449, 580, 933
PpsI	GAGTC	8 cut(s)	48, 61, 137, 150, 217, 449, 580, 933
PpuMI	RGGWCCY	1 cut(s)	664
PshBI	ATTAAT	1 cut(s)	779
PsiI	TTATAA	2 cut(s)	1421, 1676
Psp5II	RGGWCCY	1 cut(s)	664
Psp6I	CCWGG	2 cut(s)	1508, 1596
PspFI	CCCAGC	3 cut(s)	181, 214, 1411
PspGI	CCWGG	2 cut(s)	1508, 1596
PspN4I	GGNNCC	6 cut(s)	6, 623, 789, 1159, 1205, 1536
PspPI	GGNCC	6 cut(s)	5, 622, 664, 1203, 1534, 1821
PspPPI	RGGWCCY	1 cut(s)	664
PstI	CTGCAG	1 cut(s)	514
PstNI	CAGNNNCTG	1 cut(s)	1094
PsuI	RGATCY	4 cut(s)	499, 613, 731, 787
PvuII	CAGCTG	2 cut(s)	1091, 1343
RsaI	GTAC	2 cut(s)	110, 542
RsaNI	GTAC	2 cut(s)	109, 541
SalI	GTCGAC	1 cut(s)	1865
SaqAI	TTAA	3 cut(s)	651, 779, 1479
Sau3AI	GATC	7 cut(s)	499, 559, 613, 731, 787, 824, 1593
Sau96I	GGNCC	6 cut(s)	5, 622, 664, 1203, 1534, 1821
SchI	GAGTC	8 cut(s)	49, 62, 138, 151, 218, 449, 581, 934
ScrFI	CCNGG	3 cut(s)	1510, 1598, 1700
SduI	GDGCHC	1 cut(s)	719
SfaNI	GCATC	3 cut(s)	627, 838, 1450
SfcI	CTRYAG	1 cut(s)	510
SgrDI	CGTCGACG	1 cut(s)	1865
SinI	GGWCC	4 cut(s)	5, 622, 664, 1203
SmlI	CTYRAG	3 cut(s)	650, 1553, 1641
SmoI	CTYRAG	3 cut(s)	650, 1553, 1641
SpeI	ACTAGT	1 cut(s)	406
SphI	GCATGC	2 cut(s)	416, 1217
SsiI	CCGC	8 cut(s)	124, 179, 1105, 1191, 1470, 1562, 1569, 1778
StyD4I	CCNGG	3 cut(s)	1508, 1596, 1698
StyI	CCWWGG	1 cut(s)	262
TaaI	ACNGT	4 cut(s)	328, 721, 1022, 1028
TaiI	ACGT	1 cut(s)	380
TaqI	TCGA	3 cut(s)	153, 1241, 1866
TaqII	GACCGA	1 cut(s)	244
TfiI	GAWTC	1 cut(s)	1196
Tru1I	TTAA	3 cut(s)	651, 779, 1479
Tru9I	TTAA	3 cut(s)	651, 779, 1479
TscAI	CASTG	2 cut(s)	1545, 1819
TseFI	GTSAC	4 cut(s)	573, 605, 707, 1022
Tsp45I	GTSAC	4 cut(s)	573, 605, 707, 1022
TspDTI	ATGAA	6 cut(s)	603, 797, 1032, 1389, 1596, 1805
TspGWI	ACGGA	1 cut(s)	624
TspRI	CASTG	2 cut(s)	1545, 1819
Vha464I	CTTAAG	1 cut(s)	650
VpaK11BI	GGWCC	4 cut(s)	5, 622, 664, 1203
VspI	ATTAAT	1 cut(s)	779
XapI	RAATTY	3 cut(s)	229, 354, 368
XceI	RCATGY	2 cut(s)	416, 1217
XmiI	GTMKAC	1 cut(s)	1866

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.