Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr6

Orthogroup ID

OG0011054

Physical Location & Seq

Genomic Coordinates Forward (+)

13329585 .. 13332860

Gene Structure 3276 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000027631

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1884 bp

ATGGTTCTGACGGAGGACGATCCGGGGAGGTCGGTGCTGAGTCAACTCGTTGACTCGGTGAAGGCGATTGCCGAGTTGCCGGAGTGCCGGAACATGTTTAGGAAGATGTATGGGAATTTCGTGAGGAGGGTTAAGCTGTTGAGTCCTTTGTTTGAGGAGTTGAGGGATAGTGATAAGAAGCTTGGGGAAGAAGAAGTTGAGGCTTTTGAATCGCTGGGAGAGGCTTTGTGTTCGGCTATGGAGCTCATCAAGTCGGTGAACCAAGGCAGCAAGCTTTATCAGGCTTTGGAAAGAGACAAGGTTATTGCTAAGTTTCACCAAATGACGGTTAAAATTGAAGCAGCATTGAGTAAAATTCCTTATGGAAACTTTGATATGTCAGAGGAGGTCTGCGAACAGATTGAACTAGTACATGCTCAATTTAAAAGAGCAAAGGAAAAAATGGACACTCTTGACTCACAACTAGAGATGGATTTAGTCATAGCAGTGCGAGATAAGGATCCTGATACTGCAATAATTAAGAGACTTTCGGAGAAGCTGCACCTCAGAACCATCAACGATCTGAAACAAGAGTCACTTGCTTTCCATGAATTGGTTATAGCAAGTGGCGGAGATCTAGGGGACCAGTTTGAACAGATGCAAGCTCTTTTTAAGAAGCTAAATGACTATGTGGTGACAGAAAACCCAGAAATTGACAGCTCTGAACGTGACAAGGGCACAATCAAGCACAGATCTCCAGTTATCCCAGATGATTTCCGGTGTCCAATATCTCTAGAATTGATGAAAGATCCTGTCATTGTATCTACTGGACAGACGTATGAAAGATCCTGTATTCAGAAGTGGTTGGATGCTGGACACAAAACCTGTCCCAAAACACAGCAGACATTATTGCACACGGCCATAACCCCAAACTATGTTCTGAAGAGTCTAATTGCTTTGTGGTGCGAGAGCAATGGCGTTGAGCTACCCAAAAAGCAAGGGAATAAAAGCAAAAAACCAGGATGCAGTGTTTCAGACTGTGATCGTGCTTCTATTGATTCTTTATTAGAAAAATTGGCAAAGGGGAGTTCAGATGAACAAAGAGCAGCTGCTGGAGAGCTCCGCTTGCTGGCAAAAAGGAATGCAGATAATAGAGTGTGTATTGCTGATGCAGGAGCCATCCCACTCCTTGTTGAGCTTCTATCCTCCCCAGATCCTCGGACCCAAGAGCACGCCGTTACAGCACTCCTTAACCTTTCAATAAATGAGAGTAACAAGGGAGCAATTGTCATTGCAGGAGCTATACCTGATATAGTAGAAGTTTTGAAAAATGGTAGCATGGAGGCTAGAGAAAATGCAGCTGCAACCCTTTTCAGCTTGTCTGTAGTAGATGAGAACAAGGTGCAAATTGGAGCTGCTGGGGCTATCCCAGCCCTTATAAAATTGCTCTGCGAGGGGACTCCAAGAGGAAAAAAGGATGCTGCTACAGCTATATTCAATCTTTCGATCTACCAGGGAAACAAGGCCAGGGCTGTAAGGGCTGGTATTGTGACCCCGCTGATGAGATTGCTCAAGGATGCGGGAAGTGGGATGGTGGATGAAGCTCTTGCAATCCTGGCCATTCTGGCGAGTCATCACGAAGGAAAGGTGGCAATTGCTCAAGCTGAGGCAATCCCAGTTTTGGTGGAAGTTATACGAACTGGTTTCCCACGGAACCGGGAGAATGCTGCTGCTGTGTTATGGTCATTATGCACAGGTGATTTGCAGCAGTTGAAACTAGCAAGGGAACTTGGTGCAGAAGAAGCATTGCAAGAACTTTCAGAAAATGGCACTGATAGGGCCAAGCGAAAAGCTGGAAATGTTTTAGAGCTCCTTCAACGAATCGATGACCCTGCTAGTCCATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004842 GO:0005102 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0006464 GO:0006807 GO:0008150 GO:0008152 GO:0009987 GO:0016567 GO:0016740 GO:0019538 GO:0019787 GO:0032446 GO:0033612 GO:0036211 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0070647 GO:0070696 GO:0071704 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Arm U-box

Protein Analysis

628

Amino Acids

68.7

Weight (kDa)

5.57

Isoelectric Point (pI)

32.04

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PUB2_N	PF25240	11 - 120	2.1e-06	PUB2-like, N-terminal domain
PUB10_N	PF25368	34 - 145	2.7e-34	PUB10-like, N-terminal domain
U-box	PF04564	248 - 318	2.1e-21	U-box domain
ARM_ARMC5	PF24768	327 - 480	3.4e-09	ARMC5
ARM_PUB	PF25598	345 - 619	6.7e-24	Plant U-box protein ARM repeat region
Arm	PF00514	374 - 413	2e-11	Armadillo/beta-catenin-like repeat
ARM_ARMC5	PF24768	411 - 578	3.9e-09	ARMC5
Arm	PF00514	457 - 495	1.7e-06	Armadillo/beta-catenin-like repeat

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0011054)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G54850
fragaria_vesca	FvH4_7g18840 FvH4_7g18840 FvH4_7g18840
malus_domestica	MD01G1103500.v1.1 MD07G1170400.v1.1
prunus_persica	Prupe.2G209300_v2.0.a1
pyrus_communis	pycom01g13000 pycom07g16430
rosa_chinensis	RchiOBHm_Chr1g0362651
rosa_laevigata	RLG00000027631
rosa_multiflora	Rmu_sc0000046.1_g000030
rosa_roxburghii	Rroxscaffold_4G00293880
rosa_rugosa	Rorug01G0300300.1 Rorug01G0300400
rosa_samantha	Rh1AG308900 Rh1BG272700 Rh1CG290000 Rh1DG303200
rosa_wichuraiana	Rw1G027460

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1418
AccB7I	CCANNNNNTGG	1 cut(s)	592
AciI	CCGC	4 cut(s)	609, 1102, 1535, 1559
AclWI	GGATC	6 cut(s)	14, 494, 507, 782, 819, 1187
AcoI	YGGCCR	2 cut(s)	897, 1596
AcsI	RAATTY	2 cut(s)	115, 354
AcuI	CTGAAG	1 cut(s)	941
AfaI	GTAC	1 cut(s)	411
AfiI	CCNNNNNNNGG	4 cut(s)	325, 592, 1108, 1660
AflIII	ACRYGT	1 cut(s)	93
AgsI	TTSAA	9 cut(s)	209, 338, 404, 632, 1239, 1306, 1477, 1753, 1856
AhlI	ACTAGT	1 cut(s)	406
AjnI	CCWGG	4 cut(s)	997, 1491, 1505, 1593
Alw21I	GWGCWC	4 cut(s)	246, 1101, 1212, 1851
Alw26I	GTCTC	2 cut(s)	288, 517
AlwI	GGATC	6 cut(s)	14, 494, 507, 782, 819, 1187
AlwNI	CAGNNNCTG	1 cut(s)	1091
AoxI	GGCC	4 cut(s)	897, 1503, 1596, 1818
ApoI	RAATTY	2 cut(s)	115, 354
AspS9I	GGNCC	3 cut(s)	622, 1200, 1818
AsuC2I	CCSGG	2 cut(s)	24, 1697
AsuHPI	GGTGA	5 cut(s)	70, 268, 308, 685, 1748
AvaII	GGWCC	2 cut(s)	622, 1200
BaeGI	GKGCMC	1 cut(s)	719
BalI	TGGCCA	1 cut(s)	1598
BamHI	GGATCC	1 cut(s)	499
BanII	GRGCYC	3 cut(s)	246, 1101, 1851
Bbv12I	GWGCWC	4 cut(s)	246, 1101, 1212, 1851
BbvCI	CCTCAGC	1 cut(s)	1644
BccI	CCATC	4 cut(s)	463, 560, 1166, 1564
BceAI	ACGGC	2 cut(s)	912, 1199
BcgI	CGANNNNNNTGC	1 cut(s)	1853
BciT130I	CCWGG	4 cut(s)	999, 1493, 1507, 1595
BcnI	CCSGG	2 cut(s)	24, 1697
BcoDI	GTCTC	2 cut(s)	288, 517
BcuI	ACTAGT	1 cut(s)	406
BfaI	CTAG	7 cut(s)	407, 464, 617, 773, 1326, 1757, 1875
BfmI	CTRYAG	2 cut(s)	1362, 1464
BglI	GCCNNNNNGGC	1 cut(s)	1604
BglII	AGATCT	2 cut(s)	613, 731
Bme1390I	CCNGG	6 cut(s)	24, 999, 1493, 1507, 1595, 1697
Bme18I	GGWCC	2 cut(s)	622, 1200
BmgT120I	GGNCC	3 cut(s)	622, 1200, 1818
BmiI	GGNNCC	5 cut(s)	501, 623, 1156, 1202, 1694
BmrFI	CCNGG	6 cut(s)	24, 999, 1493, 1507, 1595, 1697
BmrI	ACTGGG	1 cut(s)	1649
BmsI	GCATC	6 cut(s)	627, 838, 992, 1138, 1447, 1546
BmuI	ACTGGG	1 cut(s)	1649
BpmI	CTGGAG	2 cut(s)	720, 1113
Bpu10I	CCTNAGC	1 cut(s)	1644
BpuEI	CTTGAG	2 cut(s)	1535, 1623
BpuMI	CCSGG	2 cut(s)	24, 1697
Bsa29I	ATCGAT	1 cut(s)	1863
BsaBI	GATNNNNATC	1 cut(s)	498
BsaJI	CCNNGG	6 cut(s)	23, 262, 1196, 1492, 1506, 1688
BsaWI	WCCGGW	1 cut(s)	756
BsaXI	ACNNNNNCTCC	2 cut(s)	1251, 1281
Bsc4I	CCNNNNNNNGG	4 cut(s)	325, 592, 1108, 1660
Bse1I	ACTGG	5 cut(s)	625, 737, 811, 1655, 1684
Bse3DI	GCAATG	3 cut(s)	958, 1269, 1784
Bse8I	GATNNNNATC	1 cut(s)	498
BseBI	CCWGG	4 cut(s)	999, 1493, 1507, 1595
BseCI	ATCGAT	1 cut(s)	1863
BseDI	CCNNGG	6 cut(s)	23, 262, 1196, 1492, 1506, 1688
BseGI	GGATG	7 cut(s)	853, 1007, 1158, 1462, 1561, 1575, 1582
BseJI	GATNNNNATC	1 cut(s)	498
BseLI	CCNNNNNNNGG	4 cut(s)	325, 592, 1108, 1660
BseMI	GCAATG	3 cut(s)	958, 1269, 1784
BseMII	CTCAG	3 cut(s)	29, 559, 1635
BseNI	ACTGG	5 cut(s)	625, 737, 811, 1655, 1684
BseRI	GAGGAG	3 cut(s)	139, 170, 398
BseSI	GKGCMC	1 cut(s)	719
BseYI	CCCAGC	3 cut(s)	214, 1397, 1408
BsgI	GTGCAG	2 cut(s)	524, 1794
BshFI	GGCC	4 cut(s)	899, 1505, 1598, 1820
BshVI	ATCGAT	1 cut(s)	1863
BsiHKAI	GWGCWC	4 cut(s)	246, 1101, 1212, 1851
BsiSI	CCGG	5 cut(s)	23, 80, 88, 757, 1696
BslFI	GGGAC	3 cut(s)	635, 852, 1450
BslI	CCNNNNNNNGG	4 cut(s)	325, 592, 1108, 1660
BsmAI	GTCTC	2 cut(s)	288, 517
BsmFI	GGGAC	3 cut(s)	635, 852, 1450
BsmI	GAATGC	2 cut(s)	1126, 1708
BsnI	GGCC	4 cut(s)	899, 1505, 1598, 1820
Bsp1286I	GDGCHC	5 cut(s)	246, 719, 1101, 1212, 1851
BspACI	CCGC	4 cut(s)	609, 1102, 1535, 1559
BspANI	GGCC	4 cut(s)	899, 1505, 1598, 1820
BspCNI	CTCAG	3 cut(s)	30, 558, 1636
BspDI	ATCGAT	1 cut(s)	1863
BspLI	GGNNCC	5 cut(s)	501, 623, 1156, 1202, 1694
BspPI	GGATC	6 cut(s)	14, 494, 507, 782, 819, 1187
BsrDI	GCAATG	3 cut(s)	958, 1269, 1784
BsrI	ACTGG	5 cut(s)	625, 737, 811, 1655, 1684
BssECI	CCNNGG	6 cut(s)	23, 262, 1196, 1492, 1506, 1688
BssT1I	CCWWGG	1 cut(s)	262
Bst2UI	CCWGG	4 cut(s)	999, 1493, 1507, 1595
Bst4CI	ACNGT	2 cut(s)	328, 1019
Bst6I	CTCTTC	1 cut(s)	917
BstC8I	GCNNGC	5 cut(s)	272, 642, 1106, 1110, 1212
BstDEI	CTNAG	4 cut(s)	38, 309, 545, 1644
BstDSI	CCRYGG	1 cut(s)	1688
BstF5I	GGATG	7 cut(s)	853, 1007, 1158, 1462, 1561, 1575, 1582
BstMAI	GTCTC	2 cut(s)	288, 517
BstMWI	GCNNNNNNNGC	9 cut(s)	1105, 1220, 1400, 1409, 1466, 1517, 1595, 1604, 1781
BstNI	CCWGG	4 cut(s)	999, 1493, 1507, 1595
BstNSI	RCATGY	2 cut(s)	97, 416
BstSCI	CCNGG	6 cut(s)	22, 997, 1491, 1505, 1593, 1695
BstSFI	CTRYAG	2 cut(s)	1362, 1464
BstSLI	GKGCMC	1 cut(s)	719
BstX2I	RGATCY	6 cut(s)	499, 613, 731, 787, 824, 1192
BstYI	RGATCY	6 cut(s)	499, 613, 731, 787, 824, 1192
Bsu15I	ATCGAT	1 cut(s)	1863
BsuRI	GGCC	4 cut(s)	899, 1505, 1598, 1820
BsuTUI	ATCGAT	1 cut(s)	1863
BtgI	CCRYGG	1 cut(s)	1688
BtsCI	GGATG	7 cut(s)	853, 1007, 1158, 1462, 1561, 1575, 1582
BtsI	GCAGTG	2 cut(s)	492, 1012
BtsIMutI	CAGTG	3 cut(s)	492, 1012, 1809
Cac8I	GCNNGC	5 cut(s)	272, 642, 1106, 1110, 1212
CaiI	CAGNNNCTG	1 cut(s)	1091
Cfr13I	GGNCC	3 cut(s)	622, 1200, 1818
ClaI	ATCGAT	1 cut(s)	1863
Csp6I	GTAC	1 cut(s)	410
CviAII	CATG	4 cut(s)	94, 413, 587, 1318
CviQI	GTAC	1 cut(s)	410
DdeI	CTNAG	4 cut(s)	38, 309, 545, 1644
DraI	TTTAAA	1 cut(s)	424
EaeI	YGGCCR	2 cut(s)	897, 1596
Eam1104I	CTCTTC	1 cut(s)	917
EarI	CTCTTC	1 cut(s)	917
EciI	GGCGGA	1 cut(s)	624
Ecl136II	GAGCTC	3 cut(s)	244, 1099, 1849
Eco130I	CCWWGG	1 cut(s)	262
Eco24I	GRGCYC	3 cut(s)	246, 1101, 1851
Eco47I	GGWCC	2 cut(s)	622, 1200
Eco53kI	GAGCTC	3 cut(s)	244, 1099, 1849
Eco57I	CTGAAG	1 cut(s)	941
EcoICRI	GAGCTC	3 cut(s)	244, 1099, 1849
EcoRII	CCWGG	4 cut(s)	997, 1491, 1505, 1593
EcoT14I	CCWWGG	1 cut(s)	262
EcoT38I	GRGCYC	3 cut(s)	246, 1101, 1851
ErhI	CCWWGG	1 cut(s)	262
FaeI	CATG	4 cut(s)	97, 416, 590, 1321
FalI	AAGNNNNNCTT	2 cut(s)	561, 593
FaqI	GGGAC	3 cut(s)	635, 852, 1450
FatI	CATG	4 cut(s)	93, 412, 586, 1317
FauI	CCCGC	2 cut(s)	1542, 1552
FokI	GGATG	7 cut(s)	860, 1014, 1145, 1469, 1568, 1582, 1589
FriOI	GRGCYC	3 cut(s)	246, 1101, 1851
FspBI	CTAG	7 cut(s)	407, 464, 617, 773, 1326, 1757, 1875
GsaI	CCCAGC	3 cut(s)	218, 1401, 1412
GsuI	CTGGAG	2 cut(s)	720, 1113
HaeIII	GGCC	4 cut(s)	899, 1505, 1598, 1820
HapII	CCGG	5 cut(s)	23, 80, 88, 757, 1696
Hin1II	CATG	4 cut(s)	97, 416, 590, 1321
HincII	GTYRAC	2 cut(s)	44, 52
HindII	GTYRAC	2 cut(s)	44, 52
HindIII	AAGCTT	2 cut(s)	179, 272
HpaII	CCGG	5 cut(s)	23, 80, 88, 757, 1696
HphI	GGTGA	5 cut(s)	70, 268, 308, 685, 1748
Hpy166II	GTNNAC	3 cut(s)	44, 52, 259
Hpy188III	TCNNGA	5 cut(s)	121, 452, 503, 773, 1616
Hpy8I	GTNNAC	3 cut(s)	44, 52, 259
HpyAV	CCTTC	3 cut(s)	55, 1613, 1862
HpyCH4III	ACNGT	2 cut(s)	328, 1019
HpyCH4IV	ACGT	2 cut(s)	706, 815
HpyF10VI	GCNNNNNNNGC	9 cut(s)	1105, 1220, 1400, 1409, 1466, 1517, 1595, 1604, 1781
HpyF3I	CTNAG	4 cut(s)	38, 309, 545, 1644
HpySE526I	ACGT	2 cut(s)	706, 815
Hsp92II	CATG	4 cut(s)	97, 416, 590, 1321
LmnI	GCTCC	7 cut(s)	241, 1104, 1154, 1259, 1277, 1391, 1854
LweI	GCATC	6 cut(s)	627, 838, 992, 1138, 1447, 1546
MaeI	CTAG	7 cut(s)	407, 464, 617, 773, 1326, 1757, 1875
MaeII	ACGT	2 cut(s)	706, 815
MaeIII	GTNAC	6 cut(s)	573, 673, 707, 1216, 1250, 1528
MboII	GAAGA	5 cut(s)	115, 200, 203, 934, 1790
MfeI	CAATTG	2 cut(s)	1263, 1632
MflI	RGATCY	6 cut(s)	499, 613, 731, 787, 824, 1192
MhlI	GDGCHC	5 cut(s)	246, 719, 1101, 1212, 1851
MlsI	TGGCCA	1 cut(s)	1598
MluNI	TGGCCA	1 cut(s)	1598
MlyI	GAGTC	8 cut(s)	47, 49, 151, 449, 581, 934, 1432, 1618
MmeI	TCCRAC	1 cut(s)	825
Mox20I	TGGCCA	1 cut(s)	1598
MscI	TGGCCA	1 cut(s)	1598
MseI	TTAA	6 cut(s)	132, 330, 423, 519, 651, 1230
MslI	CAYNNNNRTG	1 cut(s)	485
Msp20I	TGGCCA	1 cut(s)	1598
MspA1I	CMGCKG	3 cut(s)	1088, 1340, 1537
MspI	CCGG	5 cut(s)	23, 80, 88, 757, 1696
MspR9I	CCNGG	6 cut(s)	24, 999, 1493, 1507, 1595, 1697
MunI	CAATTG	2 cut(s)	1263, 1632
Mva1269I	GAATGC	2 cut(s)	1126, 1708
MvaI	CCWGG	4 cut(s)	999, 1493, 1507, 1595
MwoI	GCNNNNNNNGC	9 cut(s)	1105, 1220, 1400, 1409, 1466, 1517, 1595, 1604, 1781
NciI	CCSGG	2 cut(s)	24, 1697
NlaIII	CATG	4 cut(s)	97, 416, 590, 1321
NlaIV	GGNNCC	5 cut(s)	501, 623, 1156, 1202, 1694
NmeAIII	GCCGAG	1 cut(s)	97
NmuCI	GTSAC	4 cut(s)	573, 673, 707, 1528
NspI	RCATGY	2 cut(s)	97, 416
PciI	ACATGT	1 cut(s)	93
PcsI	WCGNNNNNNNCGW	1 cut(s)	62
PctI	GAATGC	2 cut(s)	1126, 1708
PfeI	GAWTC	3 cut(s)	209, 1037, 1860
PflMI	CCANNNNNTGG	1 cut(s)	592
PleI	GAGTC	8 cut(s)	47, 48, 150, 449, 580, 933, 1432, 1617
PpsI	GAGTC	8 cut(s)	47, 48, 150, 449, 580, 933, 1432, 1617
PscI	ACATGT	1 cut(s)	93
PsiI	TTATAA	1 cut(s)	1418
Psp124BI	GAGCTC	3 cut(s)	246, 1101, 1851
Psp6I	CCWGG	4 cut(s)	997, 1491, 1505, 1593
PspFI	CCCAGC	3 cut(s)	214, 1397, 1408
PspGI	CCWGG	4 cut(s)	997, 1491, 1505, 1593
PspN4I	GGNNCC	5 cut(s)	501, 623, 1156, 1202, 1694
PspPI	GGNCC	3 cut(s)	622, 1200, 1818
PstNI	CAGNNNCTG	1 cut(s)	1091
PsuI	RGATCY	6 cut(s)	499, 613, 731, 787, 824, 1192
PvuII	CAGCTG	2 cut(s)	1088, 1340
RsaI	GTAC	1 cut(s)	411
RsaNI	GTAC	1 cut(s)	410
RseI	CAYNNNNRTG	1 cut(s)	485
SacI	GAGCTC	3 cut(s)	246, 1101, 1851
SaqAI	TTAA	6 cut(s)	132, 330, 423, 519, 651, 1230
Sau96I	GGNCC	3 cut(s)	622, 1200, 1818
SchI	GAGTC	8 cut(s)	47, 49, 151, 449, 581, 934, 1432, 1618
ScrFI	CCNGG	6 cut(s)	24, 999, 1493, 1507, 1595, 1697
SduI	GDGCHC	5 cut(s)	246, 719, 1101, 1212, 1851
SfaNI	GCATC	6 cut(s)	627, 838, 992, 1138, 1447, 1546
SfcI	CTRYAG	2 cut(s)	1362, 1464
SinI	GGWCC	2 cut(s)	622, 1200
SmiMI	CAYNNNNRTG	1 cut(s)	485
SmlI	CTYRAG	2 cut(s)	1550, 1638
SmoI	CTYRAG	2 cut(s)	1550, 1638
SpeI	ACTAGT	1 cut(s)	406
SsiI	CCGC	4 cut(s)	609, 1102, 1535, 1559
SspMI	CTAG	7 cut(s)	407, 464, 617, 773, 1326, 1757, 1875
SstI	GAGCTC	3 cut(s)	246, 1101, 1851
StyD4I	CCNGG	6 cut(s)	22, 997, 1491, 1505, 1593, 1695
StyI	CCWWGG	1 cut(s)	262
TaaI	ACNGT	2 cut(s)	328, 1019
TaiI	ACGT	2 cut(s)	709, 818
TaqI	TCGA	2 cut(s)	1484, 1863
TatI	WGTACW	1 cut(s)	409
TfiI	GAWTC	3 cut(s)	209, 1037, 1860
Tru1I	TTAA	6 cut(s)	132, 330, 423, 519, 651, 1230
Tru9I	TTAA	6 cut(s)	132, 330, 423, 519, 651, 1230
TscAI	CASTG	3 cut(s)	492, 1012, 1816
TseFI	GTSAC	4 cut(s)	573, 673, 707, 1528
Tsp45I	GTSAC	4 cut(s)	573, 673, 707, 1528
TspDTI	ATGAA	5 cut(s)	603, 797, 834, 1089, 1593
TspGWI	ACGGA	2 cut(s)	26, 1705
TspRI	CASTG	3 cut(s)	492, 1012, 1816
Van91I	CCANNNNNTGG	1 cut(s)	592
VpaK11BI	GGWCC	2 cut(s)	622, 1200
XapI	RAATTY	2 cut(s)	115, 354
XbaI	TCTAGA	1 cut(s)	772
XceI	RCATGY	2 cut(s)	97, 416
XspI	CTAG	7 cut(s)	407, 464, 617, 773, 1326, 1757, 1875

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.