MD08G1009300.v1.1

La-related protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr08
OG0013628
Physical Location & Seq
Forward (+)
689585 .. 693896
4312 bp
Loading structure...
UTR
Exon/CDS
Intron
MD08G1009300.v1.1.491

Sequence Viewer

Length: 1686 bp
ATGGCGATGGCTGCGGATTCTTCTGCCAATCACCATTCCCCGCGTGGTACTGAATTTTCCGTTGATGGCGGCGGCGAAGTTGTCAACAAGAGGGCTAGTTTACCATCTCCATGGGCGAAGGTTGTCCGAGGTGGTGAACCAGAGGCTGTCCAATCTCCGCCGTCCTCATCGTCATCGTTGTCCTCGATGGGCAACTCAGCACCGGAGCAAACCCCTTTTTCCAATTGCTCCCAATCCTCCAAAGCTGCTCGTTCTTCACCGCCGCCGCCTCCCCATACGCCAGAGGGCTTTTCAGCTGCCGACAGTCCCAATGGGCATAATAGCAATGCCGGTGGGCCAAAGAAGCTGGCTTGGAACAAGCCCTCCAACGGCGTCGTTGAGGTTAGTCCTGTAACTGTTATGGATGCTTCTTCTTGGCCTGCTTTATCTGAGTCGGCTAGGGCTTCACCTAAACTACCAGCTGATTCCTCTCCAAAGACTGTCTCCGAAGCAATTGTCAACCAAGGATCATTCCCTGTTTCCCAGGGACCTGTTATAGCACATTCACCCAACTCCAAAAGACATCCTGCTAATAGTGCAAATCAGAACTCCACCCCAAATCATGCAACAGCTCGACAAAGATCATTTAAGCGTGGTGGCGGTGGCAACACTGGGGGTGGGCATGCATATAGCGGTTTTGGACACCCTGTCACCCCGCCACCACCACCACCATTCCCTGTTTTTCCTATTCTTCCAAATGGGTATGGCAATCTGGTACCAGCAATGCCAGATCCTTCTCCACGAGATCCTTCTTTCCGGGGCAGCAATTGGGATGCTAGACCAGTTCGTGGCTTTGTGCCTCAATCACACCCAGTAAACGATCATCGCAATTCTCGTAGGGGAAATTTTGGACCTCGCCCACGTGGAGATGGTCACTACCACAACAATCACGGAGGCAAGCGTGACCAGGATCGTGGAAACTATATGAATCCCAGGGATATCCACATGCATCAGCATAGAGCCCCTCCAATGAGCCTTGTAAGGCCATTACCACCAAATACTGCTGCATTTCCCCCTCAACCTGCAAGACCCTTTGCAAATCCCATGGGTTTTCCGGAGTTTATGTATGTCCCTCCATTGCCTTTGGAGCCCATTCGAAGCATGCCACCGTTCATTACTCAAGCACCACATCCTGCAATGTTTTATCCTGTTTCAGAATCTCCCCTACCTTCATTGATAATCAACCAAATAGAATATTACTTCAGTGATGCTAATTTAATAAAAGACGACTTTCTACGGTCAAACATGGATGCCCAGGGATGGGTTCCTATATCTCTAATAGCAAACTTTCCTCGGGTTAAGAGTTTGACAACCAATATCCAATTAATACTTGATTCTTTAAGAGGTTCCGGTATTGTTGAAGTACAGGATGATAAAGTGAGGAGGCGTAATGAATGGACGAAGTGGATATCAACTACTGGTCAGCTTACACCTGAGTCAGGTTCACCATCCACACTATCCTCCAGTGTATTAAGTGACAACATGCTTGCAAATTCTTTCGAAAAGATGACCGTGGAAGGACCTAGCCAAAATAGCATGGGAGGTAAGCCAGATCCAAACTCTGTGGCTATTCCAGAGAGTTGTTCAACCGAGTCAACTAGCCAAGCACAACTTCCTAATGGAGATGTTATTCAAACTGATCATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
La

Protein Analysis

562

Amino Acids

60.04

Weight (kDa)

8.95

Isoelectric Point (pI)

71.98

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
La PF05383 406 - 461 2e-25 La domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0013628)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g38070 FvH4_2g38070
malus_domestica MD08G1009300.v1.1 MD15G1008200.v1.1
prunus_persica Prupe.1G361000_v2.0.a1
pyrus_communis pycom08g00770 pycom15g00660
rosa_chinensis RchiOBHm_Chr6g0303491
rosa_laevigata RLG00000011080
rosa_multiflora Rmu_ssc0000114.1_g000046
rosa_roxburghii Rroxscaffold_7G00164700
rosa_rugosa Rorug06G0321800 Rorug06G0321900
rosa_samantha Rh6AG436200 Rh6BG467300 Rh6CG448200 Rh6DG434800
rosa_wichuraiana Rw6G037750

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1069
Acc65I GGTACC 1 cut(s) 754
AccB1I GGYRCC 1 cut(s) 754
AccB7I CCANNNNNTGG 1 cut(s) 827
AccII CGCG 1 cut(s) 43
AccIII TCCGGA 1 cut(s) 1093
AclWI GGATC 5 cut(s) 514, 764, 779, 957, 1586
AcsI RAATTY 3 cut(s) 53, 883, 1531
AcuI CTGAAG 1 cut(s) 1225
AcvI CACGTG 1 cut(s) 902
AcyI GRCGYC 1 cut(s) 372
AfaI GTAC 3 cut(s) 49, 756, 1404
AfiI CCNNNNNNNGG 5 cut(s) 368, 827, 1299, 1300, 1478
AgsI TTSAA 3 cut(s) 1400, 1626, 1673
AhdI GACNNNNNGTC 1 cut(s) 686
AjnI CCWGG 4 cut(s) 522, 945, 971, 1293
AjuI GAANNNNNNNTTGG 2 cut(s) 1635, 1667
AloI GAACNNNNNNTCC 2 cut(s) 347, 379
AluBI AGCT 6 cut(s) 245, 296, 346, 461, 611, 1465
AluI AGCT 6 cut(s) 245, 296, 346, 461, 611, 1465
Alw26I GTCTC 1 cut(s) 487
AlwI GGATC 5 cut(s) 514, 764, 779, 957, 1586
AlwNI CAGNNNCTG 1 cut(s) 146
Ama87I CYCGRG 1 cut(s) 1332
Aor13HI TCCGGA 1 cut(s) 1093
AoxI GGCC 3 cut(s) 335, 416, 1022
ApeKI GCWGC 5 cut(s) 11, 245, 296, 801, 1043
ApoI RAATTY 3 cut(s) 53, 883, 1531
ArsI GACNNNNNNTTYG 2 cut(s) 480, 512
AseI ATTAAT 1 cut(s) 1364
Asp718I GGTACC 1 cut(s) 754
AspS9I GGNCC 4 cut(s) 335, 527, 890, 1559
AsuC2I CCSGG 1 cut(s) 797
AsuHPI GGTGA 7 cut(s) 23, 146, 249, 438, 537, 682, 1476
AsuII TTCGAA 2 cut(s) 1135, 1539
AvaI CYCGRG 1 cut(s) 1332
AvaII GGWCC 3 cut(s) 527, 890, 1559
BanI GGYRCC 1 cut(s) 754
BanII GRGCYC 2 cut(s) 1003, 1131
BauI CACGAG 1 cut(s) 780
BbrPI CACGTG 1 cut(s) 902
BbvI GCAGC 4 cut(s) 232, 283, 813, 1030
BccI CCATC 6 cut(s) 59, 112, 181, 902, 1293, 1495
BceAI ACGGC 2 cut(s) 145, 385
BciT130I CCWGG 4 cut(s) 524, 947, 973, 1295
BclI TGATCA 1 cut(s) 1678
BcnI CCSGG 1 cut(s) 797
BcoDI GTCTC 1 cut(s) 487
BfaI CTAG 5 cut(s) 96, 438, 816, 1563, 1638
BfuAI ACCTGC 1 cut(s) 1069
BisI GCNGC 9 cut(s) 12, 70, 73, 246, 263, 266, 297, 802, 1044
BlsI GCNGC 9 cut(s) 13, 71, 74, 247, 264, 267, 298, 803, 1045
Bme1390I CCNGG 5 cut(s) 524, 797, 947, 973, 1295
Bme18I GGWCC 3 cut(s) 527, 890, 1559
BmeRI GACNNNNNGTC 1 cut(s) 686
BmeT110I CYCGRG 1 cut(s) 1332
BmgT120I GGNCC 4 cut(s) 335, 527, 890, 1559
BmiI GGNNCC 5 cut(s) 528, 756, 1128, 1305, 1387
BmrFI CCNGG 5 cut(s) 524, 797, 947, 973, 1295
BmrI ACTGGG 2 cut(s) 660, 845
BmsI GCATC 5 cut(s) 394, 802, 997, 1237, 1279
BmuI ACTGGG 2 cut(s) 660, 845
BpmI CTGGAG 1 cut(s) 1486
Bpu14I TTCGAA 2 cut(s) 1135, 1539
BpuEI CTTGAG 1 cut(s) 1143
BpuMI CCSGG 1 cut(s) 797
BsaAI YACGTR 1 cut(s) 902
BsaHI GRCGYC 1 cut(s) 372
BsaWI WCCGGW 3 cut(s) 202, 1093, 1388
BsaXI ACNNNNNCTCC 4 cut(s) 347, 377, 1088, 1118
Bsc4I CCNNNNNNNGG 5 cut(s) 368, 827, 1299, 1300, 1478
Bse118I RCCGGY 1 cut(s) 329
Bse1I ACTGG 5 cut(s) 655, 821, 851, 1462, 1503
Bse3DI GCAATG 4 cut(s) 331, 768, 1115, 1182
BseAI TCCGGA 1 cut(s) 1093
BseBI CCWGG 4 cut(s) 524, 947, 973, 1295
BseGI GGATG 8 cut(s) 409, 562, 817, 1168, 1294, 1304, 1414, 1487
BseLI CCNNNNNNNGG 5 cut(s) 368, 827, 1299, 1300, 1478
BseMI GCAATG 4 cut(s) 331, 768, 1115, 1182
BseMII CTCAG 3 cut(s) 210, 420, 1464
BseNI ACTGG 5 cut(s) 655, 821, 851, 1462, 1503
BseRI GAGGAG 1 cut(s) 1435
BseXI GCAGC 4 cut(s) 232, 283, 813, 1030
Bsh1236I CGCG 1 cut(s) 43
BshFI GGCC 3 cut(s) 337, 418, 1024
BshNI GGYRCC 1 cut(s) 754
BsiHKCI CYCGRG 1 cut(s) 1332
BsiSI CCGG 5 cut(s) 203, 330, 796, 1094, 1389
BslFI GGGAC 3 cut(s) 291, 540, 1094
BslI CCNNNNNNNGG 5 cut(s) 368, 827, 1299, 1300, 1478
BsmAI GTCTC 1 cut(s) 487
BsmFI GGGAC 3 cut(s) 291, 540, 1094
BsnI GGCC 3 cut(s) 337, 418, 1024
BsoBI CYCGRG 1 cut(s) 1332
Bsp119I TTCGAA 2 cut(s) 1135, 1539
Bsp1286I GDGCHC 2 cut(s) 1003, 1131
Bsp13I TCCGGA 1 cut(s) 1093
Bsp143I GATC 8 cut(s) 506, 620, 769, 784, 859, 949, 1591, 1678
Bsp19I CCATGG 2 cut(s) 110, 1083
BspANI GGCC 3 cut(s) 337, 418, 1024
BspCNI CTCAG 3 cut(s) 209, 421, 1465
BspEI TCCGGA 1 cut(s) 1093
BspFNI CGCG 1 cut(s) 43
BspLI GGNNCC 5 cut(s) 528, 756, 1128, 1305, 1387
BspMI ACCTGC 1 cut(s) 1069
BspPI GGATC 5 cut(s) 514, 764, 779, 957, 1586
BspT104I TTCGAA 2 cut(s) 1135, 1539
BspT107I GGYRCC 1 cut(s) 754
BsrDI GCAATG 4 cut(s) 331, 768, 1115, 1182
BsrFI RCCGGY 1 cut(s) 329
BsrI ACTGG 5 cut(s) 655, 821, 851, 1462, 1503
BssAI RCCGGY 1 cut(s) 329
BssMI GATC 8 cut(s) 506, 620, 769, 784, 859, 949, 1591, 1678
BssNI GRCGYC 1 cut(s) 372
BssSI CACGAG 1 cut(s) 780
BssT1I CCWWGG 3 cut(s) 110, 502, 1083
Bst2BI CACGAG 1 cut(s) 780
Bst2UI CCWGG 4 cut(s) 524, 947, 973, 1295
Bst4CI ACNGT 6 cut(s) 305, 397, 481, 1149, 1278, 1552
BstACI GRCGYC 1 cut(s) 372
BstBAI YACGTR 1 cut(s) 902
BstBI TTCGAA 2 cut(s) 1135, 1539
BstC8I GCNNGC 6 cut(s) 348, 420, 663, 938, 1142, 1527
BstDEI CTNAG 3 cut(s) 196, 429, 1473
BstDSI CCRYGG 3 cut(s) 110, 1083, 1551
BstENI CCTNNNNNAGG 1 cut(s) 1476
BstF5I GGATG 8 cut(s) 409, 562, 817, 1168, 1294, 1304, 1414, 1487
BstFNI CGCG 1 cut(s) 43
BstKTI GATC 8 cut(s) 509, 623, 772, 787, 862, 952, 1594, 1681
BstMAI GTCTC 1 cut(s) 487
BstMBI GATC 8 cut(s) 506, 620, 769, 784, 859, 949, 1591, 1678
BstMWI GCNNNNNNNGC 5 cut(s) 11, 343, 575, 1126, 1572
BstNI CCWGG 4 cut(s) 524, 947, 973, 1295
BstNSI RCATGY 4 cut(s) 665, 988, 1144, 1525
BstSCI CCNGG 5 cut(s) 522, 795, 945, 971, 1293
BstUI CGCG 1 cut(s) 43
BstV1I GCAGC 4 cut(s) 232, 283, 813, 1030
BstX2I RGATCY 3 cut(s) 769, 784, 1591
BstXI CCANNNNNNTGG 2 cut(s) 111, 953
BstYI RGATCY 3 cut(s) 769, 784, 1591
BsuRI GGCC 3 cut(s) 337, 418, 1024
BtgI CCRYGG 3 cut(s) 110, 1083, 1551
BtgZI GCGATG 2 cut(s) 20, 848
BtsCI GGATG 8 cut(s) 409, 562, 817, 1168, 1294, 1304, 1414, 1487
BtsIMutI CAGTG 3 cut(s) 648, 1249, 1510
BveI ACCTGC 1 cut(s) 1069
Cac8I GCNNGC 6 cut(s) 348, 420, 663, 938, 1142, 1527
CaiI CAGNNNCTG 1 cut(s) 146
Cfr10I RCCGGY 1 cut(s) 329
Cfr13I GGNCC 4 cut(s) 335, 527, 890, 1559
CseI GACGC 1 cut(s) 361
Csp6I GTAC 3 cut(s) 48, 755, 1403
CspCI CAANNNNNGTGG 4 cut(s) 313, 348, 1584, 1619
CviAII CATG 9 cut(s) 111, 602, 662, 985, 1084, 1141, 1285, 1522, 1576
CviQI GTAC 3 cut(s) 48, 755, 1403
DdeI CTNAG 3 cut(s) 196, 429, 1473
DpnI GATC 8 cut(s) 508, 622, 771, 786, 861, 951, 1593, 1680
DpnII GATC 8 cut(s) 506, 620, 769, 784, 859, 949, 1591, 1678
DriI GACNNNNNGTC 1 cut(s) 686
Eam1105I GACNNNNNGTC 1 cut(s) 686
EciI GGCGGA 1 cut(s) 147
Eco130I CCWWGG 3 cut(s) 110, 502, 1083
Eco24I GRGCYC 2 cut(s) 1003, 1131
Eco32I GATATC 2 cut(s) 979, 1449
Eco47I GGWCC 3 cut(s) 527, 890, 1559
Eco57I CTGAAG 1 cut(s) 1225
Eco72I CACGTG 1 cut(s) 902
Eco88I CYCGRG 1 cut(s) 1332
EcoNI CCTNNNNNAGG 1 cut(s) 1476
EcoO109I RGGNCCY 2 cut(s) 527, 1559
EcoRII CCWGG 4 cut(s) 522, 945, 971, 1293
EcoRV GATATC 2 cut(s) 979, 1449
EcoT14I CCWWGG 3 cut(s) 110, 502, 1083
EcoT22I ATGCAT 2 cut(s) 667, 990
EcoT38I GRGCYC 2 cut(s) 1003, 1131
ErhI CCWWGG 3 cut(s) 110, 502, 1083
FaeI CATG 9 cut(s) 114, 605, 665, 988, 1087, 1144, 1288, 1525, 1579
FalI AAGNNNNNCTT 2 cut(s) 1635, 1667
FaqI GGGAC 3 cut(s) 291, 540, 1094
FatI CATG 9 cut(s) 110, 601, 661, 984, 1083, 1140, 1284, 1521, 1575
FauI CCCGC 2 cut(s) 48, 702
FbaI TGATCA 1 cut(s) 1678
Fnu4HI GCNGC 9 cut(s) 12, 70, 73, 246, 263, 266, 297, 802, 1044
FokI GGATG 8 cut(s) 416, 549, 824, 1155, 1301, 1311, 1421, 1474
FriOI GRGCYC 2 cut(s) 1003, 1131
Fsp4HI GCNGC 9 cut(s) 12, 70, 73, 246, 263, 266, 297, 802, 1044
FspBI CTAG 5 cut(s) 96, 438, 816, 1563, 1638
GluI GCNGC 9 cut(s) 12, 70, 73, 246, 263, 266, 297, 802, 1044
GsuI CTGGAG 1 cut(s) 1486
HaeIII GGCC 3 cut(s) 337, 418, 1024
HapII CCGG 5 cut(s) 203, 330, 796, 1094, 1389
HgaI GACGC 1 cut(s) 361
Hin1I GRCGYC 1 cut(s) 372
Hin1II CATG 9 cut(s) 114, 605, 665, 988, 1087, 1144, 1288, 1525, 1579
HincII GTYRAC 3 cut(s) 85, 499, 1635
HindII GTYRAC 3 cut(s) 85, 499, 1635
HinfI GANTC 8 cut(s) 17, 431, 464, 967, 1196, 1373, 1475, 1631
HpaII CCGG 5 cut(s) 203, 330, 796, 1094, 1389
HphI GGTGA 7 cut(s) 23, 146, 249, 438, 537, 682, 1476
Hpy166II GTNNAC 7 cut(s) 85, 101, 137, 499, 856, 1484, 1635
Hpy188I TCNGA 5 cut(s) 128, 430, 487, 585, 1195
Hpy188III TCNNGA 2 cut(s) 1094, 1613
Hpy8I GTNNAC 7 cut(s) 85, 101, 137, 499, 856, 1484, 1635
Hpy99I CGWCG 1 cut(s) 377
HpyAV CCTTC 5 cut(s) 112, 783, 798, 1218, 1550
HpyCH4III ACNGT 6 cut(s) 305, 397, 481, 1149, 1278, 1552
HpyCH4IV ACGT 1 cut(s) 901
HpyCH4V TGCA 9 cut(s) 578, 605, 665, 988, 1046, 1064, 1076, 1175, 1529
HpyF10VI GCNNNNNNNGC 5 cut(s) 11, 343, 575, 1126, 1572
HpyF3I CTNAG 3 cut(s) 196, 429, 1473
HpySE526I ACGT 1 cut(s) 901
Hsp92I GRCGYC 1 cut(s) 372
Hsp92II CATG 9 cut(s) 114, 605, 665, 988, 1087, 1144, 1288, 1525, 1579
Kpn2I TCCGGA 1 cut(s) 1093
KpnI GGTACC 1 cut(s) 758
Ksp22I TGATCA 1 cut(s) 1678
Kzo9I GATC 8 cut(s) 506, 620, 769, 784, 859, 949, 1591, 1678
LmnI GCTCC 3 cut(s) 205, 233, 1126
Lsp1109I GCAGC 4 cut(s) 232, 283, 813, 1030
LweI GCATC 5 cut(s) 394, 802, 997, 1237, 1279
MaeI CTAG 5 cut(s) 96, 438, 816, 1563, 1638
MaeII ACGT 1 cut(s) 901
MaeIII GTNAC 5 cut(s) 391, 688, 911, 941, 1514
MalI GATC 8 cut(s) 508, 622, 771, 786, 861, 951, 1593, 1680
MboI GATC 8 cut(s) 506, 620, 769, 784, 859, 949, 1591, 1678
MboII GAAGA 4 cut(s) 12, 246, 402, 722
MfeI CAATTG 3 cut(s) 223, 492, 805
MflI RGATCY 3 cut(s) 769, 784, 1591
MhlI GDGCHC 2 cut(s) 1003, 1131
MluCI AATT 9 cut(s) 53, 223, 492, 805, 868, 883, 1252, 1361, 1531
MlyI GAGTC 3 cut(s) 440, 1484, 1640
MmeI TCCRAC 1 cut(s) 390
Mph1103I ATGCAT 2 cut(s) 667, 990
MroI TCCGGA 1 cut(s) 1093
MseI TTAA 6 cut(s) 627, 1256, 1338, 1364, 1379, 1511
MslI CAYNNNNRTG 1 cut(s) 109
MspA1I CMGCKG 2 cut(s) 296, 461
MspI CCGG 5 cut(s) 203, 330, 796, 1094, 1389
MspR9I CCNGG 5 cut(s) 524, 797, 947, 973, 1295
MunI CAATTG 3 cut(s) 223, 492, 805
MvaI CCWGG 4 cut(s) 524, 947, 973, 1295
MvnI CGCG 1 cut(s) 43
MwoI GCNNNNNNNGC 5 cut(s) 11, 343, 575, 1126, 1572
NciI CCSGG 1 cut(s) 797
NcoI CCATGG 2 cut(s) 110, 1083
NdeII GATC 8 cut(s) 506, 620, 769, 784, 859, 949, 1591, 1678
NlaIII CATG 9 cut(s) 114, 605, 665, 988, 1087, 1144, 1288, 1525, 1579
NlaIV GGNNCC 5 cut(s) 528, 756, 1128, 1305, 1387
NmuCI GTSAC 4 cut(s) 688, 911, 941, 1514
NsiI ATGCAT 2 cut(s) 667, 990
NspI RCATGY 4 cut(s) 665, 988, 1144, 1525
NspV TTCGAA 2 cut(s) 1135, 1539
PaeI GCATGC 2 cut(s) 665, 1144
PasI CCCWGGG 3 cut(s) 523, 972, 1294
PcsI WCGNNNNNNNCGW 2 cut(s) 182, 871
PfeI GAWTC 5 cut(s) 17, 464, 967, 1196, 1373
PflMI CCANNNNNTGG 1 cut(s) 827
PkrI GCNGC 9 cut(s) 13, 71, 74, 247, 264, 267, 298, 803, 1045
PleI GAGTC 3 cut(s) 439, 1483, 1639
PmaCI CACGTG 1 cut(s) 902
PmlI CACGTG 1 cut(s) 902
PpsI GAGTC 3 cut(s) 439, 1483, 1639
Ppu21I YACGTR 1 cut(s) 902
PpuMI RGGWCCY 2 cut(s) 527, 1559
PshBI ATTAAT 1 cut(s) 1364
Psp5II RGGWCCY 2 cut(s) 527, 1559
Psp6I CCWGG 4 cut(s) 522, 945, 971, 1293
PspCI CACGTG 1 cut(s) 902
PspGI CCWGG 4 cut(s) 522, 945, 971, 1293
PspN4I GGNNCC 5 cut(s) 528, 756, 1128, 1305, 1387
PspPI GGNCC 4 cut(s) 335, 527, 890, 1559
PspPPI RGGWCCY 2 cut(s) 527, 1559
PstNI CAGNNNCTG 1 cut(s) 146
PsuI RGATCY 3 cut(s) 769, 784, 1591
PvuII CAGCTG 2 cut(s) 296, 461
RsaI GTAC 3 cut(s) 49, 756, 1404
RsaNI GTAC 3 cut(s) 48, 755, 1403
RseI CAYNNNNRTG 1 cut(s) 109
SaqAI TTAA 6 cut(s) 627, 1256, 1338, 1364, 1379, 1511
SatI GCNGC 9 cut(s) 12, 70, 73, 246, 263, 266, 297, 802, 1044
Sau3AI GATC 8 cut(s) 506, 620, 769, 784, 859, 949, 1591, 1678
Sau96I GGNCC 4 cut(s) 335, 527, 890, 1559
SchI GAGTC 3 cut(s) 440, 1484, 1640
ScrFI CCNGG 5 cut(s) 524, 797, 947, 973, 1295
SduI GDGCHC 2 cut(s) 1003, 1131
SfaNI GCATC 5 cut(s) 394, 802, 997, 1237, 1279
SfuI TTCGAA 2 cut(s) 1135, 1539
SinI GGWCC 3 cut(s) 527, 890, 1559
SmiMI CAYNNNNRTG 1 cut(s) 109
SmlI CTYRAG 1 cut(s) 1158
SmoI CTYRAG 1 cut(s) 1158
SphI GCATGC 2 cut(s) 665, 1144
Sse9I AATT 9 cut(s) 53, 223, 492, 805, 868, 883, 1252, 1361, 1531
SspI AATATT 1 cut(s) 1235
SspMI CTAG 5 cut(s) 96, 438, 816, 1563, 1638
StyD4I CCNGG 5 cut(s) 522, 795, 945, 971, 1293
StyI CCWWGG 3 cut(s) 110, 502, 1083
TaaI ACNGT 6 cut(s) 305, 397, 481, 1149, 1278, 1552
TaiI ACGT 1 cut(s) 904
TaqI TCGA 4 cut(s) 185, 613, 1135, 1539
TasI AATT 9 cut(s) 53, 223, 492, 805, 868, 883, 1252, 1361, 1531
TatI WGTACW 1 cut(s) 1402
TauI GCSGC 4 cut(s) 72, 75, 265, 268
TfiI GAWTC 5 cut(s) 17, 464, 967, 1196, 1373
Tru1I TTAA 6 cut(s) 627, 1256, 1338, 1364, 1379, 1511
Tru9I TTAA 6 cut(s) 627, 1256, 1338, 1364, 1379, 1511
TscAI CASTG 3 cut(s) 655, 1249, 1510
TseFI GTSAC 4 cut(s) 688, 911, 941, 1514
TseI GCWGC 5 cut(s) 11, 245, 296, 801, 1043
Tsp45I GTSAC 4 cut(s) 688, 911, 941, 1514
TspDTI ATGAA 4 cut(s) 980, 1141, 1200, 1446
TspGWI ACGGA 2 cut(s) 49, 945
TspRI CASTG 3 cut(s) 655, 1249, 1510
Van91I CCANNNNNTGG 1 cut(s) 827
VpaK11BI GGWCC 3 cut(s) 527, 890, 1559
VspI ATTAAT 1 cut(s) 1364
XagI CCTNNNNNAGG 1 cut(s) 1476
XapI RAATTY 3 cut(s) 53, 883, 1531
XceI RCATGY 4 cut(s) 665, 988, 1144, 1525
XcmI CCANNNNNNNNNTGG 1 cut(s) 41
XspI CTAG 5 cut(s) 96, 438, 816, 1563, 1638
Zsp2I ATGCAT 2 cut(s) 667, 990
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.