Rroxscaffold_7G00164700

La-related protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000007
OG0013628
Physical Location & Seq
Forward (+)
6642683 .. 6646813
4131 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_7G00164700.1

Sequence Viewer

Length: 1653 bp
ATGGCCACGGCTGCCGATTCCTCCGCCAATCACCACTCTCCGAGGCCTGATTTTGACGCCGGCGGCGGCGGCGTCAATAGGCGAACCACTCCCTGGGCCAAGGTTGTACGAGGGGATTCGGAGTCGTCGTCGATATCACCCAATCATCAATCTCCGCCGTCCCCGCCGCCTTCGACCTCTGTACCGGAGCAAAACCCCTCTTCCAATTGCTCCGCATCGGCGGTGGCTCGTTCTTCGCCTTCTCCGCCGCCGCCAGCGGATGCTGAGAGCGGCGATGGACACAACGGCAATGCGGCTCGGATGGCAAAGAAGCCAGCTTGGAACAAGCCGACGTCGTTGGAGGTTGGTCCTGGTCCTGTAATGGGTGCGGTTGCTTGGCCTGCTTTGTCCGAGTCCGCTAGGGCTTCTTCGCCTAAATTGCCTGCTGATTCCTCTTCCAAGACCGTCACAGATGTGGCAGTTCCAGTGCCTGTATCTCCGGGACCTGTTATAACACCTTCACCCAACTCCAAAAAGCACCATGGTAACCCTGCAAACACTAACCCAGCGTCAAATCATGCAATGCCAGCTCGACAAAGACCTACAAAACGTGGTGGCGGGAGTAGCACGGGGGTTACAAGTGCACACGCACACAGTGGTTTTGCACACCCTCCCCCACCGCCACCACCACCGCCATTCCCTGTTTTCCCTATACCAAATGGTTATGGTACTCTGGTGCCTGCCATGCCTGATCCTTCTCCAAGAGACCCCTCGTTCCGTGGCAGCAATTGGGATGCTAGACCGATTGGTTTTGGGCCTCAAACACACCAAGTAAACGATCACAGGAATTCTTCCCGCAGGGGGAATTTTGGTTCCCATCCGCGTGGGGATGGTCCTTACCACAACAATTATGGGAGCAAGCGTGATCACCAAGATCGTGGAAATTTTATGAATGGCAGAGATGTCCAGATGCATCAGCAGCAGAGACCTCCTCCAAGGGGCCTTGTAAGACCAGTACCACCAAGTAGTGCTGCATTTACCCCCCAGCCGGCAAGACCATTTGCCAATCCCATGGGTTTTCCGGAGTTTGTTTACATCCCTACATTGCCTTTGGATCCCATTAGAATGCCATTCATTCCCCATGCACCACATCCTGCAATGTTTATTCCTGTTGCAGAATCTCCTATGCCTTCTCTTCCTTCCTTAATAGTCAACCAAATAGATTATTACTTCAGTGATACTAACCTGATAAGAGATGAATATTTGCGGTCAAACATGGATGCTCAAGGATGGGTTCCCATATCTTTGATAGCAAACTTTCCTCGAGTTAAGAGTTTGACAACCAATGTCCAGTTGATAATGGATTCCTTGAGAGCTTCAAGTATTGTTGAAATACAGGATGAGAAGGTGAGGAGGCGTAATGATTGGATGAAATGGATATCAACTACTGGTCGGCTTGCATCCGAATCAGGCTCATCGTCCAATGATGTACAAAGTTCTGACATGCTTTCAACTTCTTTTCAAAAGATGACAGTGGATGATGCGTCTACAAGCCAAAGTAGTATGGCAGGTAACCCAGATGCAAACTCTAAGGCTATTCCACAGAACTTTTCTACTGAGTCAGATGGAGTTTCACAGCTTCCTAACGGGGACGTCACTCAAAACAATAGTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
La

Protein Analysis

550

Amino Acids

58.63

Weight (kDa)

9.25

Isoelectric Point (pI)

65.47

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
La PF05383 396 - 451 7.2e-24 La domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0013628)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g38070 FvH4_2g38070
malus_domestica MD08G1009300.v1.1 MD15G1008200.v1.1
prunus_persica Prupe.1G361000_v2.0.a1
pyrus_communis pycom08g00770 pycom15g00660
rosa_chinensis RchiOBHm_Chr6g0303491
rosa_laevigata RLG00000011080
rosa_multiflora Rmu_ssc0000114.1_g000046
rosa_roxburghii Rroxscaffold_7G00164700
rosa_rugosa Rorug06G0321800 Rorug06G0321900
rosa_samantha Rh6AG436200 Rh6BG467300 Rh6CG448200 Rh6DG434800
rosa_wichuraiana Rw6G037750

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 491
AatII GACGTC 2 cut(s) 335, 1635
Acc36I ACCTGC 1 cut(s) 1538
AccB1I GGYRCC 1 cut(s) 715
AccB7I CCANNNNNTGG 1 cut(s) 93
AccBSI CCGCTC 1 cut(s) 270
AccI GTMKAC 1 cut(s) 1526
AccII CGCG 1 cut(s) 862
AccIII TCCGGA 1 cut(s) 1060
AclWI GGATC 3 cut(s) 725, 1088, 1101
AcoI YGGCCR 1 cut(s) 3
AcsI RAATTY 3 cut(s) 826, 844, 922
AcuI CTGAAG 1 cut(s) 1195
AcyI GRCGYC 4 cut(s) 57, 72, 332, 1632
AdeI CACNNNGTG 1 cut(s) 635
AfaI GTAC 5 cut(s) 108, 183, 709, 996, 1470
AfiI CCNNNNNNNGG 5 cut(s) 93, 362, 840, 977, 1027
AgsI TTSAA 4 cut(s) 1359, 1370, 1491, 1502
AjnI CCWGG 2 cut(s) 92, 349
AleI CACNNNNGTG 1 cut(s) 452
AloI GAACNNNNNNTCC 2 cut(s) 835, 867
AluBI AGCT 4 cut(s) 317, 569, 1355, 1618
AluI AGCT 4 cut(s) 317, 569, 1355, 1618
Alw21I GWGCWC 1 cut(s) 625
Alw26I GTCTC 2 cut(s) 738, 958
Alw44I GTGCAC 1 cut(s) 621
AlwI GGATC 3 cut(s) 725, 1088, 1101
AlwNI CAGNNNCTG 1 cut(s) 470
Ama87I CYCGRG 1 cut(s) 1302
Aor13HI TCCGGA 1 cut(s) 1060
AoxI GGCC 6 cut(s) 3, 44, 96, 377, 794, 979
ApaLI GTGCAC 1 cut(s) 621
ApeKI GCWGC 4 cut(s) 11, 762, 958, 1010
ApoI RAATTY 3 cut(s) 826, 844, 922
AspS9I GGNCC 7 cut(s) 96, 347, 353, 482, 794, 872, 979
AsuC2I CCSGG 1 cut(s) 480
AsuHPI GGTGA 5 cut(s) 23, 129, 492, 899, 1399
AvaI CYCGRG 1 cut(s) 1302
AvaII GGWCC 4 cut(s) 347, 353, 482, 872
BaeGI GKGCMC 1 cut(s) 625
BaeI ACNNNNGTAYC 4 cut(s) 165, 198, 699, 732
BalI TGGCCA 1 cut(s) 5
BamHI GGATCC 1 cut(s) 1093
BanI GGYRCC 1 cut(s) 715
Bbv12I GWGCWC 1 cut(s) 625
BbvI GCAGC 3 cut(s) 774, 970, 997
BccI CCATC 6 cut(s) 269, 295, 863, 864, 1263, 1598
BceAI ACGGC 3 cut(s) 24, 142, 301
BciT130I CCWGG 2 cut(s) 94, 351
BclI TGATCA 1 cut(s) 904
BcnI CCSGG 1 cut(s) 480
BcoDI GTCTC 2 cut(s) 738, 958
BfaI CTAG 2 cut(s) 399, 777
BfuAI ACCTGC 1 cut(s) 1538
Bme1390I CCNGG 3 cut(s) 94, 351, 480
Bme18I GGWCC 4 cut(s) 347, 353, 482, 872
BmeT110I CYCGRG 1 cut(s) 1302
BmgT120I GGNCC 7 cut(s) 96, 347, 353, 482, 794, 872, 979
BmiI GGNNCC 6 cut(s) 483, 717, 853, 980, 1095, 1275
BmrFI CCNGG 3 cut(s) 94, 351, 480
BmsI GCATC 9 cut(s) 224, 250, 763, 939, 961, 1249, 1448, 1510, 1549
BplI GAGNNNNNCTC 2 cut(s) 955, 987
BpuEI CTTGAG 2 cut(s) 1248, 1369
BpuMI CCSGG 1 cut(s) 480
BsaHI GRCGYC 4 cut(s) 57, 72, 332, 1632
BsaI GGTCTC 2 cut(s) 738, 958
BsaJI CCNNGG 9 cut(s) 6, 41, 92, 93, 99, 520, 757, 974, 1050
BsaWI WCCGGW 2 cut(s) 184, 1060
BsaXI ACNNNNNCTCC 4 cut(s) 113, 143, 886, 916
Bsc4I CCNNNNNNNGG 5 cut(s) 93, 362, 840, 977, 1027
Bse118I RCCGGY 2 cut(s) 59, 1027
Bse1I ACTGG 4 cut(s) 464, 992, 1330, 1432
Bse3DI GCAATG 4 cut(s) 295, 567, 1082, 1143
BseAI TCCGGA 1 cut(s) 1060
BseBI CCWGG 2 cut(s) 94, 351
BseDI CCNNGG 9 cut(s) 6, 41, 92, 93, 99, 520, 757, 974, 1050
BseLI CCNNNNNNNGG 5 cut(s) 93, 362, 840, 977, 1027
BseMI GCAATG 4 cut(s) 295, 567, 1082, 1143
BseMII CTCAG 2 cut(s) 255, 1587
BseNI ACTGG 4 cut(s) 464, 992, 1330, 1432
BseRI GAGGAG 2 cut(s) 960, 1405
BseSI GKGCMC 1 cut(s) 625
BseXI GCAGC 3 cut(s) 774, 970, 997
BseYI CCCAGC 2 cut(s) 544, 1023
Bsh1236I CGCG 1 cut(s) 862
BshFI GGCC 6 cut(s) 5, 46, 98, 379, 796, 981
BshNI GGYRCC 1 cut(s) 715
BsiHKAI GWGCWC 1 cut(s) 625
BsiHKCI CYCGRG 1 cut(s) 1302
BsiSI CCGG 5 cut(s) 60, 185, 479, 1028, 1061
BslFI GGGAC 3 cut(s) 145, 495, 1643
BslI CCNNNNNNNGG 5 cut(s) 93, 362, 840, 977, 1027
BsmAI GTCTC 2 cut(s) 738, 958
BsmFI GGGAC 3 cut(s) 145, 495, 1643
BsmI GAATGC 1 cut(s) 1110
BsnI GGCC 6 cut(s) 5, 46, 98, 379, 796, 981
Bso31I GGTCTC 2 cut(s) 738, 958
BsoBI CYCGRG 1 cut(s) 1302
Bsp1286I GDGCHC 1 cut(s) 625
Bsp13I TCCGGA 1 cut(s) 1060
Bsp1407I TGTACA 1 cut(s) 1468
Bsp143I GATC 5 cut(s) 730, 817, 904, 913, 1093
Bsp19I CCATGG 2 cut(s) 520, 1050
BspANI GGCC 6 cut(s) 5, 46, 98, 379, 796, 981
BspCNI CTCAG 2 cut(s) 256, 1588
BspEI TCCGGA 1 cut(s) 1060
BspFNI CGCG 1 cut(s) 862
BspLI GGNNCC 6 cut(s) 483, 717, 853, 980, 1095, 1275
BspMI ACCTGC 1 cut(s) 1538
BspPI GGATC 3 cut(s) 725, 1088, 1101
BspT107I GGYRCC 1 cut(s) 715
BspTNI GGTCTC 2 cut(s) 738, 958
BsrBI CCGCTC 1 cut(s) 270
BsrDI GCAATG 4 cut(s) 295, 567, 1082, 1143
BsrFI RCCGGY 2 cut(s) 59, 1027
BsrGI TGTACA 1 cut(s) 1468
BsrI ACTGG 4 cut(s) 464, 992, 1330, 1432
BssAI RCCGGY 2 cut(s) 59, 1027
BssECI CCNNGG 9 cut(s) 6, 41, 92, 93, 99, 520, 757, 974, 1050
BssMI GATC 5 cut(s) 730, 817, 904, 913, 1093
BssNI GRCGYC 4 cut(s) 57, 72, 332, 1632
BssT1I CCWWGG 4 cut(s) 99, 520, 974, 1050
Bst2UI CCWGG 2 cut(s) 94, 351
Bst4CI ACNGT 3 cut(s) 445, 635, 1513
Bst6I CTCTTC 3 cut(s) 205, 439, 1179
BstACI GRCGYC 4 cut(s) 57, 72, 332, 1632
BstAUI TGTACA 1 cut(s) 1468
BstDEI CTNAG 3 cut(s) 264, 1569, 1596
BstDSI CCRYGG 4 cut(s) 6, 520, 757, 1050
BstEII GGTNACC 2 cut(s) 524, 1550
BstFNI CGCG 1 cut(s) 862
BstKTI GATC 5 cut(s) 733, 820, 907, 916, 1096
BstMAI GTCTC 2 cut(s) 738, 958
BstMBI GATC 5 cut(s) 730, 817, 904, 913, 1093
BstNI CCWGG 2 cut(s) 94, 351
BstNSI RCATGY 1 cut(s) 1486
BstPI GGTNACC 2 cut(s) 524, 1550
BstSCI CCNGG 3 cut(s) 92, 349, 478
BstSLI GKGCMC 1 cut(s) 625
BstUI CGCG 1 cut(s) 862
BstV1I GCAGC 3 cut(s) 774, 970, 997
BstX2I RGATCY 1 cut(s) 1093
BstXI CCANNNNNNTGG 3 cut(s) 863, 917, 1051
BstYI RGATCY 1 cut(s) 1093
BsuRI GGCC 6 cut(s) 5, 46, 98, 379, 796, 981
BtgI CCRYGG 4 cut(s) 6, 520, 757, 1050
BtgZI GCGATG 1 cut(s) 288
BtsIMutI CAGTG 4 cut(s) 471, 640, 1219, 1518
BveI ACCTGC 1 cut(s) 1538
CaiI CAGNNNCTG 1 cut(s) 470
Cfr10I RCCGGY 2 cut(s) 59, 1027
Cfr13I GGNCC 7 cut(s) 96, 347, 353, 482, 794, 872, 979
CseI GACGC 4 cut(s) 61, 65, 537, 1512
Csp6I GTAC 5 cut(s) 107, 182, 708, 995, 1469
CviAII CATG 7 cut(s) 521, 557, 724, 1051, 1121, 1255, 1483
CviQI GTAC 5 cut(s) 107, 182, 708, 995, 1469
DdeI CTNAG 3 cut(s) 264, 1569, 1596
DpnI GATC 5 cut(s) 732, 819, 906, 915, 1095
DpnII GATC 5 cut(s) 730, 817, 904, 913, 1093
DraIII CACNNNGTG 1 cut(s) 635
EaeI YGGCCR 1 cut(s) 3
Eam1104I CTCTTC 3 cut(s) 205, 439, 1179
EarI CTCTTC 3 cut(s) 205, 439, 1179
EciI GGCGGA 3 cut(s) 13, 144, 234
Eco130I CCWWGG 4 cut(s) 99, 520, 974, 1050
Eco147I AGGCCT 1 cut(s) 46
Eco31I GGTCTC 2 cut(s) 738, 958
Eco32I GATATC 2 cut(s) 135, 1419
Eco47I GGWCC 4 cut(s) 347, 353, 482, 872
Eco57I CTGAAG 1 cut(s) 1195
Eco88I CYCGRG 1 cut(s) 1302
Eco91I GGTNACC 2 cut(s) 524, 1550
EcoO109I RGGNCCY 2 cut(s) 482, 979
EcoO65I GGTNACC 2 cut(s) 524, 1550
EcoRI GAATTC 1 cut(s) 826
EcoRII CCWGG 2 cut(s) 92, 349
EcoRV GATATC 2 cut(s) 135, 1419
EcoT14I CCWWGG 4 cut(s) 99, 520, 974, 1050
EcoT22I ATGCAT 1 cut(s) 954
ErhI CCWWGG 4 cut(s) 99, 520, 974, 1050
FaeI CATG 7 cut(s) 524, 560, 727, 1054, 1124, 1258, 1486
FaqI GGGAC 3 cut(s) 145, 495, 1643
FatI CATG 7 cut(s) 520, 556, 723, 1050, 1120, 1254, 1482
FauI CCCGC 3 cut(s) 171, 590, 842
FbaI TGATCA 1 cut(s) 904
FblI GTMKAC 1 cut(s) 1526
FspBI CTAG 2 cut(s) 399, 777
GsaI CCCAGC 2 cut(s) 548, 1027
HaeIII GGCC 6 cut(s) 5, 46, 98, 379, 796, 981
HapII CCGG 5 cut(s) 60, 185, 479, 1028, 1061
HgaI GACGC 4 cut(s) 61, 65, 537, 1512
Hin1I GRCGYC 4 cut(s) 57, 72, 332, 1632
Hin1II CATG 7 cut(s) 524, 560, 727, 1054, 1124, 1258, 1486
HincII GTYRAC 1 cut(s) 1192
HindII GTYRAC 1 cut(s) 1192
HinfI GANTC 9 cut(s) 17, 116, 122, 392, 428, 1157, 1343, 1445, 1598
HpaII CCGG 5 cut(s) 60, 185, 479, 1028, 1061
HphI GGTGA 5 cut(s) 23, 129, 492, 899, 1399
Hpy166II GTNNAC 5 cut(s) 623, 814, 1072, 1192, 1527
Hpy188I TCNGA 7 cut(s) 42, 121, 300, 391, 1444, 1480, 1603
Hpy188III TCNNGA 2 cut(s) 946, 1061
Hpy8I GTNNAC 5 cut(s) 623, 814, 1072, 1192, 1527
Hpy99I CGWCG 4 cut(s) 130, 133, 334, 337
HpyAV CCTTC 7 cut(s) 180, 249, 507, 744, 1179, 1188, 1378
HpyCH4III ACNGT 3 cut(s) 445, 635, 1513
HpyCH4IV ACGT 3 cut(s) 332, 589, 1632
HpyF3I CTNAG 3 cut(s) 264, 1569, 1596
HpySE526I ACGT 3 cut(s) 332, 589, 1632
Hsp92I GRCGYC 4 cut(s) 57, 72, 332, 1632
Hsp92II CATG 7 cut(s) 524, 560, 727, 1054, 1124, 1258, 1486
Kpn2I TCCGGA 1 cut(s) 1060
KroI GCCGGC 2 cut(s) 59, 1027
KroNI GCCGGC 2 cut(s) 61, 1029
Ksp22I TGATCA 1 cut(s) 904
Kzo9I GATC 5 cut(s) 730, 817, 904, 913, 1093
LmnI GCTCC 3 cut(s) 187, 215, 894
Lsp1109I GCAGC 3 cut(s) 774, 970, 997
LweI GCATC 9 cut(s) 224, 250, 763, 939, 961, 1249, 1448, 1510, 1549
MaeI CTAG 2 cut(s) 399, 777
MaeII ACGT 3 cut(s) 332, 589, 1632
MaeIII GTNAC 5 cut(s) 445, 524, 613, 1550, 1633
MalI GATC 5 cut(s) 732, 819, 906, 915, 1095
MbiI CCGCTC 1 cut(s) 270
MboI GATC 5 cut(s) 730, 817, 904, 913, 1093
MboII GAAGA 6 cut(s) 192, 225, 399, 426, 822, 1166
MfeI CAATTG 2 cut(s) 205, 766
MflI RGATCY 1 cut(s) 1093
MhlI GDGCHC 1 cut(s) 625
MlsI TGGCCA 1 cut(s) 5
MluCI AATT 7 cut(s) 205, 416, 766, 826, 844, 886, 922
MluNI TGGCCA 1 cut(s) 5
MlyI GAGTC 3 cut(s) 131, 401, 1607
MmeI TCCRAC 1 cut(s) 318
Mox20I TGGCCA 1 cut(s) 5
Mph1103I ATGCAT 1 cut(s) 954
MreI CGCCGGCG 1 cut(s) 59
MroI TCCGGA 1 cut(s) 1060
MroNI GCCGGC 2 cut(s) 59, 1027
MscI TGGCCA 1 cut(s) 5
MseI TTAA 2 cut(s) 1184, 1308
MslI CAYNNNNRTG 3 cut(s) 452, 861, 1103
Msp20I TGGCCA 1 cut(s) 5
MspA1I CMGCKG 1 cut(s) 257
MspI CCGG 5 cut(s) 60, 185, 479, 1028, 1061
MspR9I CCNGG 3 cut(s) 94, 351, 480
MunI CAATTG 2 cut(s) 205, 766
Mva1269I GAATGC 1 cut(s) 1110
MvaI CCWGG 2 cut(s) 94, 351
MvnI CGCG 1 cut(s) 862
NaeI GCCGGC 2 cut(s) 61, 1029
NciI CCSGG 1 cut(s) 480
NcoI CCATGG 2 cut(s) 520, 1050
NdeII GATC 5 cut(s) 730, 817, 904, 913, 1093
NgoMIV GCCGGC 2 cut(s) 59, 1027
NlaIII CATG 7 cut(s) 524, 560, 727, 1054, 1124, 1258, 1486
NlaIV GGNNCC 6 cut(s) 483, 717, 853, 980, 1095, 1275
NmuCI GTSAC 2 cut(s) 445, 1633
NsiI ATGCAT 1 cut(s) 954
NspI RCATGY 1 cut(s) 1486
OliI CACNNNNGTG 1 cut(s) 452
PaeR7I CTCGAG 1 cut(s) 1302
PasI CCCWGGG 1 cut(s) 93
PceI AGGCCT 1 cut(s) 46
PcsI WCGNNNNNNNCGW 1 cut(s) 125
PctI GAATGC 1 cut(s) 1110
PdiI GCCGGC 2 cut(s) 61, 1029
PfeI GAWTC 6 cut(s) 17, 116, 428, 1157, 1343, 1445
PflMI CCANNNNNTGG 1 cut(s) 93
PfoI TCCNGGA 1 cut(s) 478
PleI GAGTC 3 cut(s) 130, 400, 1606
PpsI GAGTC 3 cut(s) 130, 400, 1606
PpuMI RGGWCCY 1 cut(s) 482
PsiI TTATAA 1 cut(s) 491
Psp5II RGGWCCY 1 cut(s) 482
Psp6I CCWGG 2 cut(s) 92, 349
PspEI GGTNACC 2 cut(s) 524, 1550
PspFI CCCAGC 2 cut(s) 544, 1023
PspGI CCWGG 2 cut(s) 92, 349
PspN4I GGNNCC 6 cut(s) 483, 717, 853, 980, 1095, 1275
PspPI GGNCC 7 cut(s) 96, 347, 353, 482, 794, 872, 979
PspPPI RGGWCCY 1 cut(s) 482
PspXI VCTCGAGB 1 cut(s) 1302
PstNI CAGNNNCTG 1 cut(s) 470
PsuI RGATCY 1 cut(s) 1093
RsaI GTAC 5 cut(s) 108, 183, 709, 996, 1470
RsaNI GTAC 5 cut(s) 107, 182, 708, 995, 1469
RseI CAYNNNNRTG 3 cut(s) 452, 861, 1103
SaqAI TTAA 2 cut(s) 1184, 1308
Sau3AI GATC 5 cut(s) 730, 817, 904, 913, 1093
Sau96I GGNCC 7 cut(s) 96, 347, 353, 482, 794, 872, 979
SchI GAGTC 3 cut(s) 131, 401, 1607
ScrFI CCNGG 3 cut(s) 94, 351, 480
SduI GDGCHC 1 cut(s) 625
SfaNI GCATC 9 cut(s) 224, 250, 763, 939, 961, 1249, 1448, 1510, 1549
Sfr274I CTCGAG 1 cut(s) 1302
SgrAI CRCCGGYG 1 cut(s) 59
SinI GGWCC 4 cut(s) 347, 353, 482, 872
SlaI CTCGAG 1 cut(s) 1302
SmiMI CAYNNNNRTG 3 cut(s) 452, 861, 1103
SmlI CTYRAG 3 cut(s) 1263, 1302, 1348
SmoI CTYRAG 3 cut(s) 1263, 1302, 1348
Sse9I AATT 7 cut(s) 205, 416, 766, 826, 844, 886, 922
SseBI AGGCCT 1 cut(s) 46
SspI AATATT 1 cut(s) 1241
SspMI CTAG 2 cut(s) 399, 777
StuI AGGCCT 1 cut(s) 46
StyD4I CCNGG 3 cut(s) 92, 349, 478
StyI CCWWGG 4 cut(s) 99, 520, 974, 1050
TaaI ACNGT 3 cut(s) 445, 635, 1513
TaiI ACGT 3 cut(s) 335, 592, 1635
TaqI TCGA 4 cut(s) 131, 173, 571, 1303
TaqII GACCGA 1 cut(s) 796
TasI AATT 7 cut(s) 205, 416, 766, 826, 844, 886, 922
TatI WGTACW 1 cut(s) 1468
TauI GCSGC 8 cut(s) 66, 69, 72, 169, 250, 253, 273, 296
TfiI GAWTC 6 cut(s) 17, 116, 428, 1157, 1343, 1445
Tru1I TTAA 2 cut(s) 1184, 1308
Tru9I TTAA 2 cut(s) 1184, 1308
TscAI CASTG 4 cut(s) 471, 640, 1219, 1518
TseFI GTSAC 2 cut(s) 445, 1633
TseI GCWGC 4 cut(s) 11, 762, 958, 1010
Tsp45I GTSAC 2 cut(s) 445, 1633
TspDTI ATGAA 4 cut(s) 944, 1102, 1251, 1424
TspGWI ACGGA 1 cut(s) 746
TspRI CASTG 4 cut(s) 471, 640, 1219, 1518
Van91I CCANNNNNTGG 1 cut(s) 93
VneI GTGCAC 1 cut(s) 621
VpaK11BI GGWCC 4 cut(s) 347, 353, 482, 872
XapI RAATTY 3 cut(s) 826, 844, 922
XceI RCATGY 1 cut(s) 1486
XcmI CCANNNNNNNNNTGG 1 cut(s) 887
XhoI CTCGAG 1 cut(s) 1302
XmiI GTMKAC 1 cut(s) 1526
XspI CTAG 2 cut(s) 399, 777
ZraI GACGTC 2 cut(s) 333, 1633
Zsp2I ATGCAT 1 cut(s) 954
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.