Rorug06G0321900

La-related protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000006
OG0013628
Physical Location & Seq
Reverse (-)
47339376 .. 47343399
4024 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug06G0321900.1

Sequence Viewer

Length: 1776 bp
ATGGATCAGTATGAAATTCTGGAGCAGATTGGGAAAGGTTCTTTTGGTTCTGCTCTTCTCGTGCGGCATAAGCACGAAAAAAAGAAGTATGTGCTGAAGAAGATCCGTCTTGCTCGTCAAACTGATAGAACCCGCAGATCTGCTCACCAGGAGATGGAGCTTATTTCCACAGTGCAGAATCCTTTTATTGTGGAGTACAAAGATTCCTGGGTTGAAAGGGGTTGCTTTGTCTGCATTGTGATAGGCTACTGTGAAGGAGGAGACATGGCAGAAGCTATAAAAAGGGCCAAGAACGTTTATTTTACTGAAGAGAAAATCTGTAAATGGTTAGTTCAACTCTTAATGGCGCTTGATTATTTGCATGCCAACCATATTCTTCATCGTGATGTCAAGTGTTCAAACATATTTTTGACCAAGGATCAAGACATACGTCTAGGTGATTTTGGTCTTGCTAAAATGTTGACTTCTGATGATCTAGCTTCCTCTGTTGTGGGAACTCCGAGTTATATGTGCCCTGAGCTTCTTGCCGATATACCATATGGTTCTAAATCAGATCTTTGGTCTCTAGGGTGCTGTATATATGAAATGGCCGCTCACAAGCCAGCATTTAAAGCCTTTGATATACAATCTCTGATCAACAAAATCAACAAGTCAATAGTGGCTCCACTTCCAACGGTTTACTGCGGTGCATTTCGAGGTCTTGTTAAAAGCATGCTGCGCAAAAATCCAGAACTTAGACCAAGTGCTGCAGATTTGCTTGGCCATCCCCTGCTTCAACCGTATGTTATTAAGATCCATCTAAAATTAAATAGTCCTCGAAGAAATACGCTCTCAGGTGACTGGTTTCACTCCAGCTATGAAAAGAAAACAAGATTCACAGAGCCTGAAGCTATCCCCATTAACTATATCAGAGAGAAAAGGCGGTCATACAGCAATGACAGGAACTTAAATCCAAGTATTTCTGGAACCGAACAAGATTCTCCGGGTTCTAGCGTGAGAGATTATGACATCATAAAGTCAGTGGCGACAAAGTTGACTGTTGCCAATACTCCAAGATTTACACCAGCAAAAGTTTCTGCTACCCCCAGGAGACAAATAACACAATCAAAAATTTCTCACATCAGCTCAAAACGTGATTCACTTCCAGTGTCGCATTCTCCGGCAAGGAAATCTTCCCTGTCAACACGAAGACAATCTCTTCCGTTGTCAACAAGAGCTACACCTTTCCAAACCCCATATAGATCCAATGCTGGTCGACTGGGGAGTGTGGAGTCACCTGACGTTTCTGTCAATGCCCCTCGAATGGACAAGATGGCTGAATTCCCCCTAGCCTCTTCTGAAGACCCATTCATTCGCATGCGTGGAACTTCATCCACATCAGCACAATGCTCTTCTACGACCCCAGACAGCATCAACCGCTCTATCACAAAGGACAAGTGCATGGTCCAGGTTGTTCACAGAACCTTCTCCAAGTCCAATGTGATCGATGGCAACCATGAAGCTGCTCGAAATGGCAGCGAGTGCTCTGAGCAGAATCCTGCAACCGCTGTTTCAAGCCATTCTTCTTCTGAATCACGTCCAAATCGGTTCGACACCTCGTCGTTCCAGCAACGTGCAGAAGCATTAGAAGGGTTGCTCGAGTTCAGTGCACGCCTTCTACAACAAGAAAGGTTTGATGAGCTTGGTGTGCTTCTGAAGCCCTTTGGACCTGAGAAGGTTTCGCCCAGGGAAACTGCCATTTGGTTGACCAAGAGCTTCAAGGAGACGACGGTCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
La

Protein Analysis

591

Amino Acids

66.33

Weight (kDa)

9.4

Isoelectric Point (pI)

51.01

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 4 - 257 1.6e-62 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 6 - 252 3.1e-36 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0013628)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g38070 FvH4_2g38070
malus_domestica MD08G1009300.v1.1 MD15G1008200.v1.1
prunus_persica Prupe.1G361000_v2.0.a1
pyrus_communis pycom08g00770 pycom15g00660
rosa_chinensis RchiOBHm_Chr6g0303491
rosa_laevigata RLG00000011080
rosa_multiflora Rmu_ssc0000114.1_g000046
rosa_roxburghii Rroxscaffold_7G00164700
rosa_rugosa Rorug06G0321800 Rorug06G0321900
rosa_samantha Rh6AG436200 Rh6BG467300 Rh6CG448200 Rh6DG434800
rosa_wichuraiana Rw6G037750

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1286
Acc16I TGCGCA 1 cut(s) 719
AccB7I CCANNNNNTGG 1 cut(s) 154
AccBSI CCGCTC 2 cut(s) 593, 1419
AccI GTMKAC 1 cut(s) 1255
AciI CCGC 7 cut(s) 64, 133, 591, 684, 922, 1417, 1545
AclI AACGTT 1 cut(s) 294
AclWI GGATC 5 cut(s) 12, 97, 426, 787, 1236
AcoI YGGCCR 2 cut(s) 588, 760
AcsI RAATTY 3 cut(s) 15, 1110, 1319
AcuI CTGAAG 5 cut(s) 116, 327, 906, 1359, 1715
AfaI GTAC 1 cut(s) 197
AfiI CCNNNNNNNGG 2 cut(s) 154, 1303
AgsI TTSAA 6 cut(s) 215, 335, 399, 776, 1554, 1759
AhdI GACNNNNNGTC 1 cut(s) 1597
AjiI CACGTC 1 cut(s) 1577
AjnI CCWGG 5 cut(s) 147, 206, 1085, 1446, 1724
Alw21I GWGCWC 2 cut(s) 1526, 1651
Alw26I GTCTC 4 cut(s) 255, 567, 1084, 1757
Alw44I GTGCAC 1 cut(s) 1647
AlwI GGATC 5 cut(s) 12, 97, 426, 787, 1236
AlwNI CAGNNNCTG 1 cut(s) 884
Ama87I CYCGRG 1 cut(s) 1637
AoxI GGCC 3 cut(s) 285, 588, 760
ApaLI GTGCAC 1 cut(s) 1647
ApeKI GCWGC 4 cut(s) 715, 746, 1502, 1515
ApoI RAATTY 3 cut(s) 15, 1110, 1319
AspLEI GCGC 2 cut(s) 349, 720
AspS9I GGNCC 3 cut(s) 285, 1444, 1706
AsuC2I CCSGG 1 cut(s) 984
AsuHPI GGTGA 4 cut(s) 137, 449, 848, 1266
AvaI CYCGRG 1 cut(s) 1637
AvaII GGWCC 2 cut(s) 1444, 1706
BaeGI GKGCMC 2 cut(s) 515, 1651
BalI TGGCCA 1 cut(s) 762
BauI CACGAG 1 cut(s) 59
BbsI GAAGAC 2 cut(s) 1195, 1347
Bbv12I GWGCWC 2 cut(s) 1526, 1651
BbvI GCAGC 4 cut(s) 702, 733, 1489, 1527
BccI CCATC 5 cut(s) 148, 771, 804, 1306, 1481
BcgI CGANNNNNNTGC 2 cut(s) 1628, 1662
BciT130I CCWGG 5 cut(s) 149, 208, 1087, 1448, 1726
BclI TGATCA 1 cut(s) 633
BcnI CCSGG 1 cut(s) 984
BcoDI GTCTC 4 cut(s) 255, 567, 1084, 1757
BfaI CTAG 6 cut(s) 434, 476, 566, 990, 1328, 1774
BfmI CTRYAG 1 cut(s) 747
BfoI RGCGCY 1 cut(s) 350
BglII AGATCT 2 cut(s) 137, 553
BisI GCNGC 6 cut(s) 65, 591, 716, 747, 1503, 1516
BlsI GCNGC 6 cut(s) 66, 592, 717, 748, 1504, 1517
Bme1390I CCNGG 6 cut(s) 149, 208, 984, 1087, 1448, 1726
Bme18I GGWCC 2 cut(s) 1444, 1706
BmeRI GACNNNNNGTC 1 cut(s) 1597
BmeT110I CYCGRG 1 cut(s) 1637
BmgBI CACGTC 1 cut(s) 1577
BmgT120I GGNCC 3 cut(s) 285, 1444, 1706
BmiI GGNNCC 2 cut(s) 663, 967
BmrFI CCNGG 6 cut(s) 149, 208, 984, 1087, 1448, 1726
BmrI ACTGGG 1 cut(s) 1268
BmsI GCATC 1 cut(s) 1419
BmuI ACTGGG 1 cut(s) 1268
BoxI GACNNNNGTC 2 cut(s) 429, 1769
BpiI GAAGAC 2 cut(s) 1195, 1347
BpmI CTGGAG 2 cut(s) 41, 835
Bpu10I CCTNAGC 1 cut(s) 516
BpuMI CCSGG 1 cut(s) 984
Bsa29I ATCGAT 1 cut(s) 1485
BsaI GGTCTC 1 cut(s) 567
BsaJI CCNNGG 5 cut(s) 207, 414, 1085, 1724, 1725
Bsc4I CCNNNNNNNGG 2 cut(s) 154, 1303
Bse1I ACTGG 3 cut(s) 845, 1145, 1263
Bse3DI GCAATG 1 cut(s) 940
BseBI CCWGG 5 cut(s) 149, 208, 1087, 1448, 1726
BseCI ATCGAT 1 cut(s) 1485
BseDI CCNNGG 5 cut(s) 207, 414, 1085, 1724, 1725
BseGI GGATG 2 cut(s) 763, 1370
BseLI CCNNNNNNNGG 2 cut(s) 154, 1303
BseMI GCAATG 1 cut(s) 940
BseMII CTCAG 4 cut(s) 507, 846, 1518, 1701
BseNI ACTGG 3 cut(s) 845, 1145, 1263
BseRI GAGGAG 1 cut(s) 273
BseSI GKGCMC 2 cut(s) 515, 1651
BseXI GCAGC 4 cut(s) 702, 733, 1489, 1527
BsgI GTGCAG 2 cut(s) 194, 1635
BshFI GGCC 3 cut(s) 287, 590, 762
BshVI ATCGAT 1 cut(s) 1485
BsiHKAI GWGCWC 2 cut(s) 1526, 1651
BsiHKCI CYCGRG 1 cut(s) 1637
BsiSI CCGG 2 cut(s) 983, 1160
BslI CCNNNNNNNGG 2 cut(s) 154, 1303
BsmAI GTCTC 4 cut(s) 255, 567, 1084, 1757
BsmBI CGTCTC 1 cut(s) 1757
BsmI GAATGC 1 cut(s) 1153
BsnI GGCC 3 cut(s) 287, 590, 762
Bso31I GGTCTC 1 cut(s) 567
BsoBI CYCGRG 1 cut(s) 1637
Bsp1286I GDGCHC 3 cut(s) 515, 1526, 1651
BspACI CCGC 7 cut(s) 64, 133, 591, 684, 922, 1417, 1545
BspANI GGCC 3 cut(s) 287, 590, 762
BspCNI CTCAG 4 cut(s) 508, 845, 1519, 1702
BspDI ATCGAT 1 cut(s) 1485
BspLI GGNNCC 2 cut(s) 663, 967
BspMAI CTGCAG 1 cut(s) 751
BspPI GGATC 5 cut(s) 12, 97, 426, 787, 1236
BspQI GCTCTTC 2 cut(s) 60, 1396
BspTNI GGTCTC 1 cut(s) 567
BsrBI CCGCTC 2 cut(s) 593, 1419
BsrDI GCAATG 1 cut(s) 940
BsrI ACTGG 3 cut(s) 845, 1145, 1263
BssECI CCNNGG 5 cut(s) 207, 414, 1085, 1724, 1725
BssSI CACGAG 1 cut(s) 59
BssT1I CCWWGG 1 cut(s) 414
Bst2BI CACGAG 1 cut(s) 59
Bst2UI CCWGG 5 cut(s) 149, 208, 1087, 1448, 1726
Bst4CI ACNGT 6 cut(s) 172, 251, 676, 780, 1039, 1771
Bst6I CTCTTC 5 cut(s) 60, 303, 1203, 1339, 1396
BstAPI GCANNNNNTGC 1 cut(s) 1521
BstC8I GCNNGC 5 cut(s) 363, 603, 713, 1358, 1651
BstDEI CTNAG 5 cut(s) 516, 734, 832, 1527, 1710
BstF5I GGATG 2 cut(s) 763, 1370
BstH2I RGCGCY 1 cut(s) 350
BstHHI GCGC 2 cut(s) 349, 720
BstMAI GTCTC 4 cut(s) 255, 567, 1084, 1757
BstMWI GCNNNNNNNGC 8 cut(s) 70, 231, 611, 717, 1416, 1521, 1687, 1696
BstNI CCWGG 5 cut(s) 149, 208, 1087, 1448, 1726
BstNSI RCATGY 3 cut(s) 365, 715, 1360
BstPAI GACNNNNGTC 2 cut(s) 429, 1769
BstSCI CCNGG 6 cut(s) 147, 206, 982, 1085, 1446, 1724
BstSFI CTRYAG 1 cut(s) 747
BstSLI GKGCMC 2 cut(s) 515, 1651
BstV1I GCAGC 4 cut(s) 702, 733, 1489, 1527
BstV2I GAAGAC 2 cut(s) 1195, 1347
BstX2I RGATCY 5 cut(s) 102, 137, 553, 792, 1241
BstYI RGATCY 5 cut(s) 102, 137, 553, 792, 1241
Bsu15I ATCGAT 1 cut(s) 1485
BsuRI GGCC 3 cut(s) 287, 590, 762
BsuTUI ATCGAT 1 cut(s) 1485
BtrI CACGTC 1 cut(s) 1577
BtsCI GGATG 2 cut(s) 763, 1370
BtsIMutI CAGTG 4 cut(s) 177, 1026, 1152, 1651
Cac8I GCNNGC 5 cut(s) 363, 603, 713, 1358, 1651
CaiI CAGNNNCTG 1 cut(s) 884
CfoI GCGC 2 cut(s) 349, 720
Cfr13I GGNCC 3 cut(s) 285, 1444, 1706
ClaI ATCGAT 1 cut(s) 1485
Csp6I GTAC 1 cut(s) 196
CviAII CATG 6 cut(s) 265, 362, 712, 1357, 1441, 1496
CviQI GTAC 1 cut(s) 196
DdeI CTNAG 5 cut(s) 516, 734, 832, 1527, 1710
DraI TTTAAA 1 cut(s) 610
DrdI GACNNNNNNGTC 1 cut(s) 1286
DriI GACNNNNNGTC 1 cut(s) 1597
DseDI GACNNNNNNGTC 1 cut(s) 1286
EaeI YGGCCR 2 cut(s) 588, 760
Eam1104I CTCTTC 5 cut(s) 60, 303, 1203, 1339, 1396
Eam1105I GACNNNNNGTC 1 cut(s) 1597
EarI CTCTTC 5 cut(s) 60, 303, 1203, 1339, 1396
Eco130I CCWWGG 1 cut(s) 414
Eco31I GGTCTC 1 cut(s) 567
Eco47I GGWCC 2 cut(s) 1444, 1706
Eco57I CTGAAG 5 cut(s) 116, 327, 906, 1359, 1715
Eco88I CYCGRG 1 cut(s) 1637
EcoRI GAATTC 1 cut(s) 1319
EcoRII CCWGG 5 cut(s) 147, 206, 1085, 1446, 1724
EcoT14I CCWWGG 1 cut(s) 414
ErhI CCWWGG 1 cut(s) 414
Esp3I CGTCTC 1 cut(s) 1757
FaeI CATG 6 cut(s) 268, 365, 715, 1360, 1444, 1499
FalI AAGNNNNNCTT 4 cut(s) 1156, 1188, 1546, 1578
FatI CATG 6 cut(s) 264, 361, 711, 1356, 1440, 1495
FauI CCCGC 1 cut(s) 140
FauNDI CATATG 1 cut(s) 538
FbaI TGATCA 1 cut(s) 633
FblI GTMKAC 1 cut(s) 1255
Fnu4HI GCNGC 6 cut(s) 65, 591, 716, 747, 1503, 1516
FokI GGATG 2 cut(s) 750, 1357
Fsp4HI GCNGC 6 cut(s) 65, 591, 716, 747, 1503, 1516
FspBI CTAG 6 cut(s) 434, 476, 566, 990, 1328, 1774
FspI TGCGCA 1 cut(s) 719
GlaI GCGC 2 cut(s) 348, 719
GluI GCNGC 6 cut(s) 65, 591, 716, 747, 1503, 1516
GsuI CTGGAG 2 cut(s) 41, 835
HaeII RGCGCY 1 cut(s) 350
HaeIII GGCC 3 cut(s) 287, 590, 762
HapII CCGG 2 cut(s) 983, 1160
HhaI GCGC 2 cut(s) 349, 720
Hin1II CATG 6 cut(s) 268, 365, 715, 1360, 1444, 1499
Hin6I GCGC 2 cut(s) 347, 718
HinP1I GCGC 2 cut(s) 347, 718
HincII GTYRAC 6 cut(s) 462, 1035, 1182, 1209, 1256, 1746
HindII GTYRAC 6 cut(s) 462, 1035, 1182, 1209, 1256, 1746
HinfI GANTC 8 cut(s) 178, 203, 873, 977, 1136, 1271, 1534, 1571
HpaII CCGG 2 cut(s) 983, 1160
HphI GGTGA 4 cut(s) 137, 449, 848, 1266
Hpy166II GTNNAC 9 cut(s) 462, 679, 1035, 1182, 1209, 1256, 1456, 1649, 1746
Hpy188I TCNGA 9 cut(s) 469, 501, 553, 633, 911, 1339, 1528, 1570, 1695
Hpy188III TCNNGA 5 cut(s) 20, 383, 422, 728, 963
Hpy8I GTNNAC 9 cut(s) 462, 679, 1035, 1182, 1209, 1256, 1456, 1649, 1746
Hpy99I CGWCG 2 cut(s) 1603, 1771
HpyAV CCTTC 5 cut(s) 248, 1474, 1622, 1664, 1708
HpyCH4III ACNGT 6 cut(s) 172, 251, 676, 780, 1039, 1771
HpyCH4IV ACGT 6 cut(s) 294, 430, 1132, 1281, 1576, 1612
HpyCH4V TGCA 9 cut(s) 175, 234, 361, 689, 749, 1440, 1541, 1616, 1649
HpyF10VI GCNNNNNNNGC 8 cut(s) 70, 231, 611, 717, 1416, 1521, 1687, 1696
HpyF3I CTNAG 5 cut(s) 516, 734, 832, 1527, 1710
HpySE526I ACGT 6 cut(s) 294, 430, 1132, 1281, 1576, 1612
Hsp92II CATG 6 cut(s) 268, 365, 715, 1360, 1444, 1499
HspAI GCGC 2 cut(s) 347, 718
Ksp22I TGATCA 1 cut(s) 633
LguI GCTCTTC 2 cut(s) 60, 1396
LmnI GCTCC 3 cut(s) 22, 157, 667
Lsp1109I GCAGC 4 cut(s) 702, 733, 1489, 1527
LweI GCATC 1 cut(s) 1419
MaeI CTAG 6 cut(s) 434, 476, 566, 990, 1328, 1774
MaeII ACGT 6 cut(s) 294, 430, 1132, 1281, 1576, 1612
MaeIII GTNAC 2 cut(s) 836, 1272
MbiI CCGCTC 2 cut(s) 593, 1419
MflI RGATCY 5 cut(s) 102, 137, 553, 792, 1241
MhlI GDGCHC 3 cut(s) 515, 1526, 1651
MlsI TGGCCA 1 cut(s) 762
MluCI AATT 4 cut(s) 15, 803, 1110, 1319
MluNI TGGCCA 1 cut(s) 762
MlyI GAGTC 1 cut(s) 1280
MmeI TCCRAC 1 cut(s) 695
MnlI CCTC 7 cut(s) 251, 493, 689, 825, 1308, 1342, 1606
Mox20I TGGCCA 1 cut(s) 762
MscI TGGCCA 1 cut(s) 762
MseI TTAA 7 cut(s) 341, 609, 705, 789, 806, 900, 947
MslI CAYNNNNRTG 2 cut(s) 384, 1355
Msp20I TGGCCA 1 cut(s) 762
MspA1I CMGCKG 1 cut(s) 1547
MspI CCGG 2 cut(s) 983, 1160
MspR9I CCNGG 6 cut(s) 149, 208, 984, 1087, 1448, 1726
Mva1269I GAATGC 1 cut(s) 1153
MvaI CCWGG 5 cut(s) 149, 208, 1087, 1448, 1726
MwoI GCNNNNNNNGC 8 cut(s) 70, 231, 611, 717, 1416, 1521, 1687, 1696
NciI CCSGG 1 cut(s) 984
NdeI CATATG 1 cut(s) 538
NlaIII CATG 6 cut(s) 268, 365, 715, 1360, 1444, 1499
NlaIV GGNNCC 2 cut(s) 663, 967
NmuCI GTSAC 2 cut(s) 836, 1272
NsbI TGCGCA 1 cut(s) 719
NspI RCATGY 3 cut(s) 365, 715, 1360
PaeI GCATGC 3 cut(s) 365, 715, 1360
PaeR7I CTCGAG 1 cut(s) 1637
PasI CCCWGGG 1 cut(s) 1725
PciSI GCTCTTC 2 cut(s) 60, 1396
PctI GAATGC 1 cut(s) 1153
PfeI GAWTC 7 cut(s) 178, 203, 873, 977, 1136, 1534, 1571
PflMI CCANNNNNTGG 1 cut(s) 154
PkrI GCNGC 6 cut(s) 66, 592, 717, 748, 1504, 1517
PleI GAGTC 1 cut(s) 1279
PpsI GAGTC 1 cut(s) 1279
PshAI GACNNNNGTC 2 cut(s) 429, 1769
Psp1406I AACGTT 1 cut(s) 294
Psp6I CCWGG 5 cut(s) 147, 206, 1085, 1446, 1724
PspGI CCWGG 5 cut(s) 147, 206, 1085, 1446, 1724
PspN4I GGNNCC 2 cut(s) 663, 967
PspPI GGNCC 3 cut(s) 285, 1444, 1706
PspXI VCTCGAGB 1 cut(s) 1637
PstI CTGCAG 1 cut(s) 751
PstNI CAGNNNCTG 1 cut(s) 884
PsuI RGATCY 5 cut(s) 102, 137, 553, 792, 1241
RsaI GTAC 1 cut(s) 197
RsaNI GTAC 1 cut(s) 196
RseI CAYNNNNRTG 2 cut(s) 384, 1355
SalI GTCGAC 1 cut(s) 1254
SapI GCTCTTC 2 cut(s) 60, 1396
SaqAI TTAA 7 cut(s) 341, 609, 705, 789, 806, 900, 947
SatI GCNGC 6 cut(s) 65, 591, 716, 747, 1503, 1516
Sau96I GGNCC 3 cut(s) 285, 1444, 1706
SchI GAGTC 1 cut(s) 1280
ScrFI CCNGG 6 cut(s) 149, 208, 984, 1087, 1448, 1726
SduI GDGCHC 3 cut(s) 515, 1526, 1651
SfaNI GCATC 1 cut(s) 1419
SfcI CTRYAG 1 cut(s) 747
Sfr274I CTCGAG 1 cut(s) 1637
SinI GGWCC 2 cut(s) 1444, 1706
SlaI CTCGAG 1 cut(s) 1637
SmiMI CAYNNNNRTG 2 cut(s) 384, 1355
SmlI CTYRAG 1 cut(s) 1637
SmoI CTYRAG 1 cut(s) 1637
SphI GCATGC 3 cut(s) 365, 715, 1360
Sse9I AATT 4 cut(s) 15, 803, 1110, 1319
SsiI CCGC 7 cut(s) 64, 133, 591, 684, 922, 1417, 1545
SspMI CTAG 6 cut(s) 434, 476, 566, 990, 1328, 1774
StyD4I CCNGG 6 cut(s) 147, 206, 982, 1085, 1446, 1724
StyI CCWWGG 1 cut(s) 414
TaaI ACNGT 6 cut(s) 172, 251, 676, 780, 1039, 1771
TaiI ACGT 6 cut(s) 297, 433, 1135, 1284, 1579, 1615
TaqI TCGA 8 cut(s) 694, 817, 1255, 1300, 1485, 1507, 1590, 1638
TasI AATT 4 cut(s) 15, 803, 1110, 1319
TatI WGTACW 1 cut(s) 195
TauI GCSGC 2 cut(s) 67, 593
TfiI GAWTC 7 cut(s) 178, 203, 873, 977, 1136, 1534, 1571
Tru1I TTAA 7 cut(s) 341, 609, 705, 789, 806, 900, 947
Tru9I TTAA 7 cut(s) 341, 609, 705, 789, 806, 900, 947
TscAI CASTG 4 cut(s) 177, 1026, 1152, 1651
TseFI GTSAC 2 cut(s) 836, 1272
TseI GCWGC 4 cut(s) 715, 746, 1502, 1515
Tsp45I GTSAC 2 cut(s) 836, 1272
TspDTI ATGAA 7 cut(s) 27, 368, 597, 873, 1339, 1359, 1512
TspGWI ACGGA 2 cut(s) 95, 1191
TspRI CASTG 4 cut(s) 177, 1026, 1152, 1651
Van91I CCANNNNNTGG 1 cut(s) 154
VneI GTGCAC 1 cut(s) 1647
VpaK11BI GGWCC 2 cut(s) 1444, 1706
XapI RAATTY 3 cut(s) 15, 1110, 1319
XceI RCATGY 3 cut(s) 365, 715, 1360
XhoI CTCGAG 1 cut(s) 1637
XmiI GTMKAC 1 cut(s) 1255
XspI CTAG 6 cut(s) 434, 476, 566, 990, 1328, 1774
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.