RLG00000011080

La-related protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr3
OG0013628
Physical Location & Seq
Forward (+)
6576557 .. 6579887
3331 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000011080

Sequence Viewer

Length: 1656 bp
ATGGCCACGGCTGCCGATTCCTCCGCCAATCACCACTCTCCGAGGCCTGATTTTGACGCCGGCGGCGTCAATAGGCGAACCACTCCCTGGGCCAAGGTTGTACGAGGGGATTTGGAGTCGTCGTCGATATCACCCAATCATCAATCTCCGCCGTCGCCGCCGCCTTCGACCTCTGTACCGGAGCAAAACCCCTCTTCCAATTGCTCCCCATCGGCGGTGGCTCGTTCTTCGCCTTCTCCGCCGCCGCCATCGGATGCTGAGAGCGGCGATGGACACAACGGCAATGCGGCTCGGATGGCAAAGAAGCCAGCTTGGAACAAGCCGACGTCGTTGGAGGTTGGTCCTGGTCCTGTAATGGGTGCGGTTGCTTGGCCTGCTTTGTCTGAGTCCGCTAGGGCTTCACCTAAATTGCCTGCTGATTCCTCTTCCAAGATCGTCACAGATGTGGCAGTTCCAGTGCCTGTATCTCCGGGACCTGTTATAACACCTTCAACCAACTCCAAAAAGCACCATGGTAACCCTGCAAACACTAACCCAGCATCAAATTATGCAATGCCAGCTCGACAAAGACCTACAAAACGTGGTGGCGGGAGTAGCACGGGGGTTACAAGTGCACACGCACATGCACACGCACACAGTGGTTTTGCACACCCTCCCCCACCGCCACCACCACCGCCATTCCCTGTTTTCCCTATACCAAATGGTTATGGTACTCTGGTGCCTGCCATTCCTGATCCTTCTCCAAGAGACCCCTCGTTCCGTGGCAGCAATTGGGATGCTAGACCGATTGGTTTTGGGCCTCAAACGCACCAGGTAAACGATCACAGGAATTCTTCCCGCAGGGGGAATTTTGGTTCCCACCCGCGTGGAGATGGTCCTTACCACAACAATTATGGGAGCAAGCGTGATCACCAAGATCGTGGAAATTTTATGAATGGCAGAGATGTCCAGATGCATCAGCAGCAGAGACCTCCTCCAAGGGGCCTTGTAAGACCAGTATCACCAAGTAGTGCTGCATTTACCCCCCAGCCGGCAAGACCATTTGCCAACCCCATGGGTTTTCCGGAGTTTGTTTACATCCCTACATTGCCTTTGGATCCCATTAGAATGCCATTCATTCCCCATGCACCACATCCTGCAATGTTTATTCCTGTTGCAGAATCTCCTATGCCTTCTCTTCCTTCCTTAATAGTCAACCAAATAGATTATTACTTCAGTGATACTAACCTGATAAGAGATGAATATTTGCGGTCAAACATGGATGCTCAAGGATGGGTTCCCATATCTTTAATAGCAAACTTTCCTCGAGTTAAGAGTCTGACAACCAATGTCCAGTTGATAATGGATTCCTTGAGAGCTTCAAGTATTGTTGAAGTACAGGATGAGAAGGTGAGGAGGCGTAATGATTGGACAAAATGGATATCAACTACTGGTCGGCTTGCATCCGAATCAGGCTCATCGTCCAATGATGTACAAAGTTCTGACATGCTTTCAACTTCTTTTCAAAAGATGACAGTGGATGATGCGTCTACTAGCCAAAGTAGTATGGCAGGTAACCCAGATGCAAACTCTAAGGCTATTCCACAGAACCTTTCTGCTGAGTCAGCTGGAGTTTCACAGCTCCCTAACGGGGACGTCACTCAAAACAATAGTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
La

Protein Analysis

552

Amino Acids

58.77

Weight (kDa)

9.35

Isoelectric Point (pI)

62.03

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
La PF05383 397 - 452 7.2e-24 La domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0013628)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g38070 FvH4_2g38070
malus_domestica MD08G1009300.v1.1 MD15G1008200.v1.1
prunus_persica Prupe.1G361000_v2.0.a1
pyrus_communis pycom08g00770 pycom15g00660
rosa_chinensis RchiOBHm_Chr6g0303491
rosa_laevigata RLG00000011080
rosa_multiflora Rmu_ssc0000114.1_g000046
rosa_roxburghii Rroxscaffold_7G00164700
rosa_rugosa Rorug06G0321800 Rorug06G0321900
rosa_samantha Rh6AG436200 Rh6BG467300 Rh6CG448200 Rh6DG434800
rosa_wichuraiana Rw6G037750

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 482
AatII GACGTC 2 cut(s) 329, 1638
Acc36I ACCTGC 1 cut(s) 1541
AccB1I GGYRCC 1 cut(s) 718
AccB7I CCANNNNNTGG 1 cut(s) 87
AccBSI CCGCTC 1 cut(s) 264
AccI GTMKAC 1 cut(s) 1529
AccII CGCG 1 cut(s) 865
AccIII TCCGGA 1 cut(s) 1063
AclWI GGATC 3 cut(s) 728, 1091, 1104
AcoI YGGCCR 1 cut(s) 3
AcsI RAATTY 3 cut(s) 829, 847, 925
AcuI CTGAAG 1 cut(s) 1198
AcyI GRCGYC 4 cut(s) 57, 66, 326, 1635
AdeI CACNNNGTG 1 cut(s) 638
AfaI GTAC 5 cut(s) 102, 177, 712, 1377, 1473
AfiI CCNNNNNNNGG 7 cut(s) 87, 214, 356, 843, 980, 1030, 1630
AgsI TTSAA 5 cut(s) 492, 1362, 1373, 1494, 1505
AjnI CCWGG 3 cut(s) 86, 343, 810
AleI CACNNNNGTG 2 cut(s) 443, 864
AloI GAACNNNNNNTCC 2 cut(s) 838, 870
AluBI AGCT 5 cut(s) 311, 560, 1358, 1607, 1621
AluI AGCT 5 cut(s) 311, 560, 1358, 1607, 1621
Alw21I GWGCWC 1 cut(s) 616
Alw26I GTCTC 2 cut(s) 741, 961
Alw44I GTGCAC 1 cut(s) 612
AlwI GGATC 3 cut(s) 728, 1091, 1104
AlwNI CAGNNNCTG 1 cut(s) 461
Ama87I CYCGRG 1 cut(s) 1305
Aor13HI TCCGGA 1 cut(s) 1063
AoxI GGCC 6 cut(s) 3, 44, 90, 371, 797, 982
ApaLI GTGCAC 1 cut(s) 612
ApeKI GCWGC 4 cut(s) 11, 765, 961, 1013
ApoI RAATTY 3 cut(s) 829, 847, 925
AspS9I GGNCC 7 cut(s) 90, 341, 347, 473, 797, 875, 982
AsuC2I CCSGG 1 cut(s) 471
AsuHPI GGTGA 6 cut(s) 23, 123, 393, 902, 993, 1402
AvaI CYCGRG 1 cut(s) 1305
AvaII GGWCC 4 cut(s) 341, 347, 473, 875
BaeGI GKGCMC 1 cut(s) 616
BaeI ACNNNNGTAYC 4 cut(s) 159, 192, 702, 735
BalI TGGCCA 1 cut(s) 5
BamHI GGATCC 1 cut(s) 1096
BanI GGYRCC 1 cut(s) 718
Bbv12I GWGCWC 1 cut(s) 616
BbvI GCAGC 3 cut(s) 777, 973, 1000
BccI CCATC 6 cut(s) 217, 256, 263, 289, 866, 1266
BceAI ACGGC 3 cut(s) 24, 136, 295
BciT130I CCWGG 3 cut(s) 88, 345, 812
BclI TGATCA 1 cut(s) 907
BcnI CCSGG 1 cut(s) 471
BcoDI GTCTC 2 cut(s) 741, 961
BfaI CTAG 3 cut(s) 393, 780, 1533
BfuAI ACCTGC 1 cut(s) 1541
Bme1390I CCNGG 4 cut(s) 88, 345, 471, 812
Bme18I GGWCC 4 cut(s) 341, 347, 473, 875
BmeT110I CYCGRG 1 cut(s) 1305
BmgT120I GGNCC 7 cut(s) 90, 341, 347, 473, 797, 875, 982
BmiI GGNNCC 6 cut(s) 474, 720, 856, 983, 1098, 1278
BmrFI CCNGG 4 cut(s) 88, 345, 471, 812
BmsI GCATC 9 cut(s) 244, 548, 766, 942, 964, 1252, 1451, 1513, 1552
BplI GAGNNNNNCTC 2 cut(s) 958, 990
BpmI CTGGAG 1 cut(s) 1629
BpuEI CTTGAG 2 cut(s) 1251, 1372
BpuMI CCSGG 1 cut(s) 471
BsaHI GRCGYC 4 cut(s) 57, 66, 326, 1635
BsaI GGTCTC 2 cut(s) 741, 961
BsaJI CCNNGG 9 cut(s) 6, 41, 86, 87, 93, 511, 760, 977, 1053
BsaWI WCCGGW 2 cut(s) 178, 1063
BsaXI ACNNNNNCTCC 4 cut(s) 107, 137, 889, 919
Bsc4I CCNNNNNNNGG 7 cut(s) 87, 214, 356, 843, 980, 1030, 1630
Bse118I RCCGGY 2 cut(s) 59, 1030
Bse1I ACTGG 4 cut(s) 455, 995, 1333, 1435
Bse3DI GCAATG 4 cut(s) 289, 558, 1085, 1146
BseAI TCCGGA 1 cut(s) 1063
BseBI CCWGG 3 cut(s) 88, 345, 812
BseDI CCNNGG 9 cut(s) 6, 41, 86, 87, 93, 511, 760, 977, 1053
BseLI CCNNNNNNNGG 7 cut(s) 87, 214, 356, 843, 980, 1030, 1630
BseMI GCAATG 4 cut(s) 289, 558, 1085, 1146
BseMII CTCAG 3 cut(s) 249, 375, 1590
BseNI ACTGG 4 cut(s) 455, 995, 1333, 1435
BseRI GAGGAG 2 cut(s) 963, 1408
BseSI GKGCMC 1 cut(s) 616
BseXI GCAGC 3 cut(s) 777, 973, 1000
BseYI CCCAGC 2 cut(s) 535, 1026
Bsh1236I CGCG 1 cut(s) 865
BshFI GGCC 6 cut(s) 5, 46, 92, 373, 799, 984
BshNI GGYRCC 1 cut(s) 718
BsiHKAI GWGCWC 1 cut(s) 616
BsiHKCI CYCGRG 1 cut(s) 1305
BsiSI CCGG 5 cut(s) 60, 179, 470, 1031, 1064
BslFI GGGAC 2 cut(s) 486, 1646
BslI CCNNNNNNNGG 7 cut(s) 87, 214, 356, 843, 980, 1030, 1630
BsmAI GTCTC 2 cut(s) 741, 961
BsmFI GGGAC 2 cut(s) 486, 1646
BsmI GAATGC 1 cut(s) 1113
BsnI GGCC 6 cut(s) 5, 46, 92, 373, 799, 984
Bso31I GGTCTC 2 cut(s) 741, 961
BsoBI CYCGRG 1 cut(s) 1305
Bsp1286I GDGCHC 1 cut(s) 616
Bsp13I TCCGGA 1 cut(s) 1063
Bsp1407I TGTACA 1 cut(s) 1471
Bsp143I GATC 6 cut(s) 432, 733, 820, 907, 916, 1096
Bsp19I CCATGG 2 cut(s) 511, 1053
BspANI GGCC 6 cut(s) 5, 46, 92, 373, 799, 984
BspCNI CTCAG 3 cut(s) 250, 376, 1591
BspEI TCCGGA 1 cut(s) 1063
BspFNI CGCG 1 cut(s) 865
BspLI GGNNCC 6 cut(s) 474, 720, 856, 983, 1098, 1278
BspMI ACCTGC 1 cut(s) 1541
BspPI GGATC 3 cut(s) 728, 1091, 1104
BspT107I GGYRCC 1 cut(s) 718
BspTNI GGTCTC 2 cut(s) 741, 961
BsrBI CCGCTC 1 cut(s) 264
BsrDI GCAATG 4 cut(s) 289, 558, 1085, 1146
BsrFI RCCGGY 2 cut(s) 59, 1030
BsrGI TGTACA 1 cut(s) 1471
BsrI ACTGG 4 cut(s) 455, 995, 1333, 1435
BssAI RCCGGY 2 cut(s) 59, 1030
BssECI CCNNGG 9 cut(s) 6, 41, 86, 87, 93, 511, 760, 977, 1053
BssMI GATC 6 cut(s) 432, 733, 820, 907, 916, 1096
BssNI GRCGYC 4 cut(s) 57, 66, 326, 1635
BssT1I CCWWGG 4 cut(s) 93, 511, 977, 1053
Bst2UI CCWGG 3 cut(s) 88, 345, 812
Bst4CI ACNGT 2 cut(s) 638, 1516
Bst6I CTCTTC 3 cut(s) 199, 430, 1182
BstACI GRCGYC 4 cut(s) 57, 66, 326, 1635
BstAUI TGTACA 1 cut(s) 1471
BstC8I GCNNGC 9 cut(s) 61, 309, 375, 414, 558, 723, 902, 1032, 1440
BstDEI CTNAG 4 cut(s) 258, 384, 1572, 1599
BstDSI CCRYGG 4 cut(s) 6, 511, 760, 1053
BstEII GGTNACC 2 cut(s) 515, 1553
BstFNI CGCG 1 cut(s) 865
BstKTI GATC 6 cut(s) 435, 736, 823, 910, 919, 1099
BstMAI GTCTC 2 cut(s) 741, 961
BstMBI GATC 6 cut(s) 432, 733, 820, 907, 916, 1096
BstNI CCWGG 3 cut(s) 88, 345, 812
BstNSI RCATGY 2 cut(s) 626, 1489
BstPI GGTNACC 2 cut(s) 515, 1553
BstSCI CCNGG 4 cut(s) 86, 343, 469, 810
BstSLI GKGCMC 1 cut(s) 616
BstUI CGCG 1 cut(s) 865
BstV1I GCAGC 3 cut(s) 777, 973, 1000
BstX2I RGATCY 1 cut(s) 1096
BstXI CCANNNNNNTGG 3 cut(s) 866, 920, 1054
BstYI RGATCY 1 cut(s) 1096
BsuRI GGCC 6 cut(s) 5, 46, 92, 373, 799, 984
BtgI CCRYGG 4 cut(s) 6, 511, 760, 1053
BtgZI GCGATG 1 cut(s) 282
BtsIMutI CAGTG 4 cut(s) 462, 643, 1222, 1521
BveI ACCTGC 1 cut(s) 1541
Cac8I GCNNGC 9 cut(s) 61, 309, 375, 414, 558, 723, 902, 1032, 1440
CaiI CAGNNNCTG 1 cut(s) 461
Cfr10I RCCGGY 2 cut(s) 59, 1030
Cfr13I GGNCC 7 cut(s) 90, 341, 347, 473, 797, 875, 982
CseI GACGC 3 cut(s) 55, 65, 1515
CsiI ACCWGGT 1 cut(s) 810
Csp6I GTAC 5 cut(s) 101, 176, 711, 1376, 1472
CviAII CATG 6 cut(s) 512, 623, 1054, 1124, 1258, 1486
CviQI GTAC 5 cut(s) 101, 176, 711, 1376, 1472
DdeI CTNAG 4 cut(s) 258, 384, 1572, 1599
DpnI GATC 6 cut(s) 434, 735, 822, 909, 918, 1098
DpnII GATC 6 cut(s) 432, 733, 820, 907, 916, 1096
DraIII CACNNNGTG 1 cut(s) 638
EaeI YGGCCR 1 cut(s) 3
Eam1104I CTCTTC 3 cut(s) 199, 430, 1182
EarI CTCTTC 3 cut(s) 199, 430, 1182
EciI GGCGGA 3 cut(s) 13, 138, 228
Eco130I CCWWGG 4 cut(s) 93, 511, 977, 1053
Eco147I AGGCCT 1 cut(s) 46
Eco31I GGTCTC 2 cut(s) 741, 961
Eco32I GATATC 2 cut(s) 129, 1422
Eco47I GGWCC 4 cut(s) 341, 347, 473, 875
Eco57I CTGAAG 1 cut(s) 1198
Eco88I CYCGRG 1 cut(s) 1305
Eco91I GGTNACC 2 cut(s) 515, 1553
EcoO109I RGGNCCY 2 cut(s) 473, 982
EcoO65I GGTNACC 2 cut(s) 515, 1553
EcoRI GAATTC 1 cut(s) 829
EcoRII CCWGG 3 cut(s) 86, 343, 810
EcoRV GATATC 2 cut(s) 129, 1422
EcoT14I CCWWGG 4 cut(s) 93, 511, 977, 1053
EcoT22I ATGCAT 1 cut(s) 957
ErhI CCWWGG 4 cut(s) 93, 511, 977, 1053
FaeI CATG 6 cut(s) 515, 626, 1057, 1127, 1261, 1489
FaqI GGGAC 2 cut(s) 486, 1646
FatI CATG 6 cut(s) 511, 622, 1053, 1123, 1257, 1485
FauI CCCGC 3 cut(s) 581, 845, 870
FbaI TGATCA 1 cut(s) 907
FblI GTMKAC 1 cut(s) 1529
FspBI CTAG 3 cut(s) 393, 780, 1533
GsaI CCCAGC 2 cut(s) 539, 1030
GsuI CTGGAG 1 cut(s) 1629
HaeIII GGCC 6 cut(s) 5, 46, 92, 373, 799, 984
HapII CCGG 5 cut(s) 60, 179, 470, 1031, 1064
HgaI GACGC 3 cut(s) 55, 65, 1515
Hin1I GRCGYC 4 cut(s) 57, 66, 326, 1635
Hin1II CATG 6 cut(s) 515, 626, 1057, 1127, 1261, 1489
HincII GTYRAC 1 cut(s) 1195
HindII GTYRAC 1 cut(s) 1195
HinfI GANTC 9 cut(s) 17, 116, 386, 419, 1160, 1315, 1346, 1448, 1601
HpaII CCGG 5 cut(s) 60, 179, 470, 1031, 1064
HphI GGTGA 6 cut(s) 23, 123, 393, 902, 993, 1402
Hpy166II GTNNAC 5 cut(s) 614, 817, 1075, 1195, 1530
Hpy188I TCNGA 7 cut(s) 42, 253, 294, 385, 1320, 1447, 1483
Hpy188III TCNNGA 3 cut(s) 731, 949, 1064
Hpy8I GTNNAC 5 cut(s) 614, 817, 1075, 1195, 1530
Hpy99I CGWCG 5 cut(s) 124, 127, 157, 328, 331
HpyAV CCTTC 7 cut(s) 174, 243, 498, 747, 1182, 1191, 1381
HpyCH4III ACNGT 2 cut(s) 638, 1516
HpyCH4IV ACGT 3 cut(s) 326, 580, 1635
HpyF3I CTNAG 4 cut(s) 258, 384, 1572, 1599
HpySE526I ACGT 3 cut(s) 326, 580, 1635
Hsp92I GRCGYC 4 cut(s) 57, 66, 326, 1635
Hsp92II CATG 6 cut(s) 515, 626, 1057, 1127, 1261, 1489
Kpn2I TCCGGA 1 cut(s) 1063
KroI GCCGGC 2 cut(s) 59, 1030
KroNI GCCGGC 2 cut(s) 61, 1032
Ksp22I TGATCA 1 cut(s) 907
Kzo9I GATC 6 cut(s) 432, 733, 820, 907, 916, 1096
LmnI GCTCC 4 cut(s) 181, 209, 897, 1626
Lsp1109I GCAGC 3 cut(s) 777, 973, 1000
LweI GCATC 9 cut(s) 244, 548, 766, 942, 964, 1252, 1451, 1513, 1552
MabI ACCWGGT 1 cut(s) 810
MaeI CTAG 3 cut(s) 393, 780, 1533
MaeII ACGT 3 cut(s) 326, 580, 1635
MaeIII GTNAC 5 cut(s) 436, 515, 604, 1553, 1636
MalI GATC 6 cut(s) 434, 735, 822, 909, 918, 1098
MbiI CCGCTC 1 cut(s) 264
MboI GATC 6 cut(s) 432, 733, 820, 907, 916, 1096
MboII GAAGA 5 cut(s) 186, 219, 417, 825, 1169
MfeI CAATTG 2 cut(s) 199, 769
MflI RGATCY 1 cut(s) 1096
MhlI GDGCHC 1 cut(s) 616
MlsI TGGCCA 1 cut(s) 5
MluCI AATT 8 cut(s) 199, 407, 544, 769, 829, 847, 889, 925
MluNI TGGCCA 1 cut(s) 5
MlyI GAGTC 4 cut(s) 125, 395, 1324, 1610
MmeI TCCRAC 1 cut(s) 312
Mox20I TGGCCA 1 cut(s) 5
Mph1103I ATGCAT 1 cut(s) 957
MreI CGCCGGCG 1 cut(s) 59
MroI TCCGGA 1 cut(s) 1063
MroNI GCCGGC 2 cut(s) 59, 1030
MscI TGGCCA 1 cut(s) 5
MseI TTAA 3 cut(s) 1187, 1289, 1311
MslI CAYNNNNRTG 4 cut(s) 443, 621, 864, 1106
Msp20I TGGCCA 1 cut(s) 5
MspA1I CMGCKG 1 cut(s) 1607
MspI CCGG 5 cut(s) 60, 179, 470, 1031, 1064
MspR9I CCNGG 4 cut(s) 88, 345, 471, 812
MunI CAATTG 2 cut(s) 199, 769
Mva1269I GAATGC 1 cut(s) 1113
MvaI CCWGG 3 cut(s) 88, 345, 812
MvnI CGCG 1 cut(s) 865
NaeI GCCGGC 2 cut(s) 61, 1032
NciI CCSGG 1 cut(s) 471
NcoI CCATGG 2 cut(s) 511, 1053
NdeII GATC 6 cut(s) 432, 733, 820, 907, 916, 1096
NgoMIV GCCGGC 2 cut(s) 59, 1030
NlaIII CATG 6 cut(s) 515, 626, 1057, 1127, 1261, 1489
NlaIV GGNNCC 6 cut(s) 474, 720, 856, 983, 1098, 1278
NmuCI GTSAC 2 cut(s) 436, 1636
NsiI ATGCAT 1 cut(s) 957
NspI RCATGY 2 cut(s) 626, 1489
OliI CACNNNNGTG 2 cut(s) 443, 864
PaeR7I CTCGAG 1 cut(s) 1305
PasI CCCWGGG 1 cut(s) 87
PceI AGGCCT 1 cut(s) 46
PcsI WCGNNNNNNNCGW 1 cut(s) 63
PctI GAATGC 1 cut(s) 1113
PdiI GCCGGC 2 cut(s) 61, 1032
PfeI GAWTC 5 cut(s) 17, 419, 1160, 1346, 1448
PflMI CCANNNNNTGG 1 cut(s) 87
PfoI TCCNGGA 1 cut(s) 469
PleI GAGTC 4 cut(s) 124, 394, 1323, 1609
PpsI GAGTC 4 cut(s) 124, 394, 1323, 1609
PpuMI RGGWCCY 1 cut(s) 473
PsiI TTATAA 1 cut(s) 482
Psp5II RGGWCCY 1 cut(s) 473
Psp6I CCWGG 3 cut(s) 86, 343, 810
PspEI GGTNACC 2 cut(s) 515, 1553
PspFI CCCAGC 2 cut(s) 535, 1026
PspGI CCWGG 3 cut(s) 86, 343, 810
PspN4I GGNNCC 6 cut(s) 474, 720, 856, 983, 1098, 1278
PspPI GGNCC 7 cut(s) 90, 341, 347, 473, 797, 875, 982
PspPPI RGGWCCY 1 cut(s) 473
PspXI VCTCGAGB 1 cut(s) 1305
PstNI CAGNNNCTG 1 cut(s) 461
PsuI RGATCY 1 cut(s) 1096
PvuII CAGCTG 1 cut(s) 1607
RsaI GTAC 5 cut(s) 102, 177, 712, 1377, 1473
RsaNI GTAC 5 cut(s) 101, 176, 711, 1376, 1472
RseI CAYNNNNRTG 4 cut(s) 443, 621, 864, 1106
SaqAI TTAA 3 cut(s) 1187, 1289, 1311
Sau3AI GATC 6 cut(s) 432, 733, 820, 907, 916, 1096
Sau96I GGNCC 7 cut(s) 90, 341, 347, 473, 797, 875, 982
SchI GAGTC 4 cut(s) 125, 395, 1324, 1610
ScrFI CCNGG 4 cut(s) 88, 345, 471, 812
SduI GDGCHC 1 cut(s) 616
SexAI ACCWGGT 1 cut(s) 810
SfaNI GCATC 9 cut(s) 244, 548, 766, 942, 964, 1252, 1451, 1513, 1552
Sfr274I CTCGAG 1 cut(s) 1305
SgrAI CRCCGGYG 1 cut(s) 59
SinI GGWCC 4 cut(s) 341, 347, 473, 875
SlaI CTCGAG 1 cut(s) 1305
SmiMI CAYNNNNRTG 4 cut(s) 443, 621, 864, 1106
SmlI CTYRAG 3 cut(s) 1266, 1305, 1351
SmoI CTYRAG 3 cut(s) 1266, 1305, 1351
Sse9I AATT 8 cut(s) 199, 407, 544, 769, 829, 847, 889, 925
SseBI AGGCCT 1 cut(s) 46
SspI AATATT 1 cut(s) 1244
SspMI CTAG 3 cut(s) 393, 780, 1533
StuI AGGCCT 1 cut(s) 46
StyD4I CCNGG 4 cut(s) 86, 343, 469, 810
StyI CCWWGG 4 cut(s) 93, 511, 977, 1053
TaaI ACNGT 2 cut(s) 638, 1516
TaiI ACGT 3 cut(s) 329, 583, 1638
TaqI TCGA 4 cut(s) 125, 167, 562, 1306
TaqII GACCGA 1 cut(s) 799
TasI AATT 8 cut(s) 199, 407, 544, 769, 829, 847, 889, 925
TatI WGTACW 2 cut(s) 1375, 1471
TauI GCSGC 7 cut(s) 66, 160, 163, 244, 247, 267, 290
TfiI GAWTC 5 cut(s) 17, 419, 1160, 1346, 1448
Tru1I TTAA 3 cut(s) 1187, 1289, 1311
Tru9I TTAA 3 cut(s) 1187, 1289, 1311
TscAI CASTG 4 cut(s) 462, 643, 1222, 1521
TseFI GTSAC 2 cut(s) 436, 1636
TseI GCWGC 4 cut(s) 11, 765, 961, 1013
Tsp45I GTSAC 2 cut(s) 436, 1636
TspDTI ATGAA 3 cut(s) 947, 1105, 1254
TspGWI ACGGA 1 cut(s) 749
TspRI CASTG 4 cut(s) 462, 643, 1222, 1521
Van91I CCANNNNNTGG 1 cut(s) 87
VneI GTGCAC 1 cut(s) 612
VpaK11BI GGWCC 4 cut(s) 341, 347, 473, 875
XapI RAATTY 3 cut(s) 829, 847, 925
XceI RCATGY 2 cut(s) 626, 1489
XcmI CCANNNNNNNNNTGG 1 cut(s) 890
XhoI CTCGAG 1 cut(s) 1305
XmiI GTMKAC 1 cut(s) 1529
XspI CTAG 3 cut(s) 393, 780, 1533
ZraI GACGTC 2 cut(s) 327, 1636
Zsp2I ATGCAT 1 cut(s) 957
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.