Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr08

Orthogroup ID

OG0015565

Physical Location & Seq

Genomic Coordinates Reverse (-)

2990042 .. 2993173

Gene Structure 3132 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD08G1040500.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1668 bp

ATGCGTGCAGCGACGGAGGGACTCGAGAACATGGCGTTTATTGCAAATGCTATGAGCCTTGTGACTTATTTCTATGGATATATGAACTTGAGCTTGACAAAGTCTGCCACCACTCTTACCAACTTCATGGGGACTGCATTTATACTAACCCTAGTTGGTGGCTTCATCTCTGATACTTATTGGTCGAGATTCAAAACTTGTGTCGTCTTCATCTGCATTGAATTGGTGGGACTTGGTCTGTTAACAATACAAGCACACTTCCCTCAACTAAGGCCATTCCCTTGCAAAGGTGTTGCACCAAGCCAAATGTACCAGTGTGAGGCTCCAAACACAAGCCAACTTGCAATGCTCTACACCGGACTCTACCTAATGGCTTTAGGCACCAGCGGCGTCAAGGCAGCTTTGCCGGCCCTGGGAGCCGACCAATACGACGAGAAGGACCCTAAGGGAGCAGCACAGTTGTCCAGCTTCTTCAACTGGTTCTTGTTCAGCCTCACCATTGGAGCTATTTTTGGTGTCACTTTTGTGGTTTGGATCAGCACCAACCATGGTTGGGACTTGTCCTTTGTTGTGTGCACCATTGCAGTTCTCTTTGCTCTTCTTTTCGTGTGCATGGGAAAGTCACTCTACAGAAACAATGTTCCCAAGGGAAGTCCCCTCCTGAGTATCCTACAGGTTTGTGTGGTTGCCATCAAAAACCGAAAACTTCAAATTCCTGAGAATACAGAGGAGTTGCATGAGATCCATGACAAAGAAGCAGGTGAACAACATGAAATTCTTCAGAGAACAGATCAATTCAGATGGTTGGACCGCGCAGCGATCTCCAGTGGCACTACGGCTGACGGTGCATCAACACCTACAGTACATGGATCATGGAGCCTATGCACTGTTACACAAGTTGAAGAAACAAAGCTCCTAATCCGCATGCTCCCAATCATATTAAGCACTGTCTTCATGAACACATGCATGGCGCAACTCCAGACCTTCTCAATCCAACAGAGCACAACCATGAACCGTAATCTGCTCGGATTCAAAGTTCCCGGCCCTTCAATCCCAGCAATCCCTTTAACCTTCATGTTCTTTCTTATCCCGATTTACGAAAGAATTTTCGTGCCAATCGCTCGAAAAATCACCGGGATCCCAACCGGGATACGCCACCTCCAGCGCATCGCAGTTGGGCTAGTGCTCTCTGCTATCTCCATGGCGGTGGCCGGACTCGTAGAAACTCGCCGCAAACACGTAGCGGTTCAACACAACATGGTCGACAGCGCAGAGCCACTGCCGATGAGTGTTTTTTGGCTGGGGCTGCAGTATGCAATTTTCGGAGCTGCAGATATGTTTACATTGGTAGGGCTTCTGGAGTTCTTCTATGCTGAGAGTGCGGTCGGAATGAAGTCTCTCAGCACCGCCATATCGTGGTGTTCGATTGCGTTTGGGTATTTCTTGAGCACGGTGGTGGTGGAGGTGGTGAATAAAGTCAGCGGCGGGTGGCTGGCTAGCAATAATTTGAACAGAGATAAGCTGAACTATTTCTATTGGTTGTTGGCAGGGCTCAGTGTGCTTAATTTTGGAGGTTATGTGGTTTGTGCATCTTGGTATAAGTACAAAAAGGTAGAAGTGATTAAGGAAGGTGATTACAGTGGGAAGGTTGAAATGGTTAAAGCCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215 GO:0005319 GO:0005342 GO:0005575 GO:0005623 GO:0005886 GO:0006810 GO:0006811 GO:0006820 GO:0006869 GO:0008028 GO:0008150 GO:0008509 GO:0008514 GO:0009605 GO:0009607 GO:0009624 GO:0010119 GO:0010876 GO:0015075 GO:0015318 GO:0015665 GO:0015711 GO:0015718 GO:0015849 GO:0015850 GO:0016020 GO:0022857 GO:0033036 GO:0034220 GO:0043207 GO:0044464 GO:0046864 GO:0046865 GO:0046942 GO:0046943 GO:0050789 GO:0050794 GO:0050896 GO:0051179 GO:0051234 GO:0051704 GO:0051707 GO:0055085 GO:0065007 GO:0071702 GO:0071944 GO:0080168 GO:0090440 GO:0098656 GO:1901618 GO:1903825 GO:1905039

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PTR2

Protein Analysis

556

Amino Acids

61.3

Weight (kDa)

8.51

Isoelectric Point (pI)

31.9

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
MFS_1	PF07690	16 - 405	6.8e-09	Major Facilitator Superfamily
PTR2	PF00854	64 - 494	1.5e-87	POT family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0015565)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_2g40690 FvH4_2g40690
malus_domestica	MD08G1040500.v1.1
prunus_persica	Prupe.1G389100_v2.0.a1
pyrus_communis	pycom08g03270
rosa_chinensis	RchiOBHm_Chr6g0299911
rosa_laevigata	RLG00000011376
rosa_multiflora	Rmu_co8499763.1_g000001 Rmu_sc0008023.1_g000004
rosa_roxburghii	Rroxscaffold_7G00168280
rosa_rugosa	Rorug06G0293200
rosa_samantha	Rh6AG404500 Rh6BG412800 Rh6CG418900 Rh6DG405700
rosa_wichuraiana	Rw6G035400

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	749
Acc36I	ACCTGC	1 cut(s)	749
AccB1I	GGYRCC	1 cut(s)	380
AccB7I	CCANNNNNTGG	1 cut(s)	1416
AccI	GTMKAC	1 cut(s)	1263
AccII	CGCG	1 cut(s)	813
AclWI	GGATC	5 cut(s)	542, 736, 877, 1132, 1145
AcoI	YGGCCR	1 cut(s)	1209
AcsI	RAATTY	3 cut(s)	711, 774, 1104
AcuI	CTGAAG	1 cut(s)	764
AcyI	GRCGYC	1 cut(s)	390
AfaI	GTAC	3 cut(s)	311, 864, 1604
AfiI	CCNNNNNNNGG	5 cut(s)	287, 319, 413, 553, 1416
AflIII	ACRYGT	1 cut(s)	1237
AjnI	CCWGG	1 cut(s)	411
AleI	CACNNNNGTG	2 cut(s)	524, 1454
AloI	GAACNNNNNNTCC	2 cut(s)	1020, 1052
AluBI	AGCT	7 cut(s)	93, 401, 468, 506, 913, 1328, 1522
AluI	AGCT	7 cut(s)	93, 401, 468, 506, 913, 1328, 1522
Alw21I	GWGCWC	4 cut(s)	578, 1004, 1188, 1451
Alw26I	GTCTC	1 cut(s)	1401
Alw44I	GTGCAC	1 cut(s)	574
AlwI	GGATC	5 cut(s)	542, 736, 877, 1132, 1145
Ama87I	CYCGRG	1 cut(s)	23
AoxI	GGCC	4 cut(s)	272, 408, 1042, 1209
ApaLI	GTGCAC	1 cut(s)	574
ApeKI	GCWGC	6 cut(s)	8, 398, 452, 815, 1306, 1328
ApoI	RAATTY	3 cut(s)	711, 774, 1104
ArsI	GACNNNNNNTTYG	4 cut(s)	186, 218, 548, 580
Asp700I	GAANNNNTTC	2 cut(s)	777, 1529
AspLEI	GCGC	4 cut(s)	815, 973, 1167, 1271
AspS9I	GGNCC	4 cut(s)	409, 439, 808, 1043
AsuC2I	CCSGG	3 cut(s)	1041, 1135, 1147
AsuHPI	GGTGA	5 cut(s)	487, 773, 1123, 1480, 1643
AsuNHI	GCTAGC	1 cut(s)	1496
AvaI	CYCGRG	1 cut(s)	23
AvaII	GGWCC	2 cut(s)	439, 808
AxyI	CCTNAGG	1 cut(s)	444
BaeGI	GKGCMC	1 cut(s)	578
BamHI	GGATCC	1 cut(s)	1137
BanI	GGYRCC	1 cut(s)	380
BanII	GRGCYC	1 cut(s)	1554
BbsI	GAAGAC	2 cut(s)	199, 943
Bbv12I	GWGCWC	4 cut(s)	578, 1004, 1188, 1451
BbvI	GCAGC	6 cut(s)	20, 410, 464, 827, 1293, 1315
BccI	CCATC	2 cut(s)	698, 795
BceAI	ACGGC	1 cut(s)	852
BciT130I	CCWGG	1 cut(s)	413
BciVI	GTATCC	2 cut(s)	677, 1143
BcnI	CCSGG	3 cut(s)	1041, 1135, 1147
BcoDI	GTCTC	1 cut(s)	1401
BfaI	CTAG	4 cut(s)	152, 1181, 1497, 1666
BfmI	CTRYAG	5 cut(s)	628, 671, 858, 1307, 1329
BfuAI	ACCTGC	1 cut(s)	749
BfuI	GTATCC	2 cut(s)	677, 1143
BisI	GCNGC	9 cut(s)	9, 388, 399, 453, 816, 1231, 1307, 1329, 1483
BlsI	GCNGC	9 cut(s)	10, 389, 400, 454, 817, 1232, 1308, 1330, 1484
Bme1390I	CCNGG	4 cut(s)	413, 1041, 1135, 1147
Bme18I	GGWCC	2 cut(s)	439, 808
BmeT110I	CYCGRG	1 cut(s)	23
BmgT120I	GGNCC	4 cut(s)	409, 439, 808, 1043
BmiI	GGNNCC	6 cut(s)	324, 382, 418, 441, 878, 1139
BmrFI	CCNGG	4 cut(s)	413, 1041, 1135, 1147
BmsI	GCATC	3 cut(s)	857, 1176, 1598
BmtI	GCTAGC	1 cut(s)	1500
BpiI	GAAGAC	2 cut(s)	199, 943
BpmI	CTGGAG	4 cut(s)	808, 962, 1145, 1379
BpuEI	CTTGAG	2 cut(s)	109, 1465
BpuMI	CCSGG	3 cut(s)	1041, 1135, 1147
BsaAI	YACGTR	1 cut(s)	1240
BsaHI	GRCGYC	1 cut(s)	390
BsaJI	CCNNGG	5 cut(s)	411, 412, 547, 645, 1200
BsaWI	WCCGGW	1 cut(s)	356
BsaXI	ACNNNNNCTCC	4 cut(s)	1143, 1173, 1563, 1593
Bsc4I	CCNNNNNNNGG	5 cut(s)	287, 319, 413, 553, 1416
Bse118I	RCCGGY	1 cut(s)	406
Bse1I	ACTGG	3 cut(s)	313, 482, 825
Bse21I	CCTNAGG	1 cut(s)	444
Bse3DI	GCAATG	2 cut(s)	351, 579
BseBI	CCWGG	1 cut(s)	413
BseDI	CCNNGG	5 cut(s)	411, 412, 547, 645, 1200
BseLI	CCNNNNNNNGG	5 cut(s)	287, 319, 413, 553, 1416
BseMI	GCAATG	2 cut(s)	351, 579
BseMII	CTCAG	5 cut(s)	653, 708, 1365, 1414, 1567
BseNI	ACTGG	3 cut(s)	313, 482, 825
BseRI	GAGGAG	1 cut(s)	743
BseSI	GKGCMC	1 cut(s)	578
BseXI	GCAGC	6 cut(s)	20, 410, 464, 827, 1293, 1315
BseYI	CCCAGC	2 cut(s)	1054, 1300
BsgI	GTGCAG	1 cut(s)	27
Bsh1236I	CGCG	1 cut(s)	813
Bsh1285I	CGRYCG	1 cut(s)	1386
BshFI	GGCC	4 cut(s)	274, 410, 1044, 1211
BshNI	GGYRCC	1 cut(s)	380
BsiEI	CGRYCG	1 cut(s)	1386
BsiHKAI	GWGCWC	4 cut(s)	578, 1004, 1188, 1451
BsiHKCI	CYCGRG	1 cut(s)	23
BsiSI	CCGG	6 cut(s)	357, 407, 1041, 1134, 1146, 1212
BslFI	GGGAC	5 cut(s)	33, 145, 243, 569, 639
BslI	CCNNNNNNNGG	5 cut(s)	287, 319, 413, 553, 1416
BsmAI	GTCTC	1 cut(s)	1401
BsmFI	GGGAC	5 cut(s)	33, 145, 243, 569, 639
BsnI	GGCC	4 cut(s)	274, 410, 1044, 1211
BsoBI	CYCGRG	1 cut(s)	23
Bsp1286I	GDGCHC	5 cut(s)	578, 1004, 1188, 1451, 1554
Bsp143I	GATC	6 cut(s)	534, 741, 790, 819, 869, 1137
Bsp19I	CCATGG	2 cut(s)	547, 1200
BspANI	GGCC	4 cut(s)	274, 410, 1044, 1211
BspCNI	CTCAG	5 cut(s)	654, 709, 1366, 1413, 1566
BspFNI	CGCG	1 cut(s)	813
BspHI	TCATGA	1 cut(s)	954
BspLI	GGNNCC	6 cut(s)	324, 382, 418, 441, 878, 1139
BspMAI	CTGCAG	2 cut(s)	1311, 1333
BspMI	ACCTGC	1 cut(s)	749
BspOI	GCTAGC	1 cut(s)	1500
BspPI	GGATC	5 cut(s)	542, 736, 877, 1132, 1145
BspQI	GCTCTTC	1 cut(s)	603
BspT107I	GGYRCC	1 cut(s)	380
BsrDI	GCAATG	2 cut(s)	351, 579
BsrFI	RCCGGY	1 cut(s)	406
BsrI	ACTGG	3 cut(s)	313, 482, 825
BssAI	RCCGGY	1 cut(s)	406
BssECI	CCNNGG	5 cut(s)	411, 412, 547, 645, 1200
BssMI	GATC	6 cut(s)	534, 741, 790, 819, 869, 1137
BssNI	GRCGYC	1 cut(s)	390
BssT1I	CCWWGG	3 cut(s)	547, 645, 1200
Bst2UI	CCWGG	1 cut(s)	413
Bst4CI	ACNGT	8 cut(s)	459, 845, 862, 889, 949, 1016, 1453, 1640
Bst6I	CTCTTC	1 cut(s)	603
BstACI	GRCGYC	1 cut(s)	390
BstBAI	YACGTR	1 cut(s)	1240
BstC8I	GCNNGC	5 cut(s)	6, 408, 926, 1494, 1498
BstDEI	CTNAG	7 cut(s)	269, 444, 662, 717, 1374, 1400, 1553
BstDSI	CCRYGG	2 cut(s)	547, 1200
BstENI	CCTNNNNNAGG	1 cut(s)	285
BstFNI	CGCG	1 cut(s)	813
BstHHI	GCGC	4 cut(s)	815, 973, 1167, 1271
BstKTI	GATC	6 cut(s)	537, 744, 793, 822, 872, 1140
BstMAI	GTCTC	1 cut(s)	1401
BstMBI	GATC	6 cut(s)	534, 741, 790, 819, 869, 1137
BstMCI	CGRYCG	1 cut(s)	1386
BstMWI	GCNNNNNNNGC	8 cut(s)	41, 387, 407, 416, 845, 1306, 1379, 1558
BstNI	CCWGG	1 cut(s)	413
BstNSI	RCATGY	2 cut(s)	928, 966
BstSCI	CCNGG	4 cut(s)	411, 1039, 1133, 1145
BstSFI	CTRYAG	5 cut(s)	628, 671, 858, 1307, 1329
BstSLI	GKGCMC	1 cut(s)	578
BstUI	CGCG	1 cut(s)	813
BstV1I	GCAGC	6 cut(s)	20, 410, 464, 827, 1293, 1315
BstV2I	GAAGAC	2 cut(s)	199, 943
BstX2I	RGATCY	2 cut(s)	741, 1137
BstXI	CCANNNNNNTGG	2 cut(s)	127, 1207
BstYI	RGATCY	2 cut(s)	741, 1137
Bsu36I	CCTNAGG	1 cut(s)	444
BsuI	GTATCC	2 cut(s)	677, 1143
BsuRI	GGCC	4 cut(s)	274, 410, 1044, 1211
BtgI	CCRYGG	2 cut(s)	547, 1200
BtgZI	GCGATG	1 cut(s)	1153
BtsI	GCAGTG	1 cut(s)	1277
BtsIMutI	CAGTG	7 cut(s)	320, 832, 885, 945, 1277, 1561, 1645
BveI	ACCTGC	1 cut(s)	749
Cac8I	GCNNGC	5 cut(s)	6, 408, 926, 1494, 1498
CciI	TCATGA	1 cut(s)	954
CfoI	GCGC	4 cut(s)	815, 973, 1167, 1271
Cfr10I	RCCGGY	1 cut(s)	406
Cfr13I	GGNCC	4 cut(s)	409, 439, 808, 1043
CseI	GACGC	1 cut(s)	379
Csp6I	GTAC	3 cut(s)	310, 863, 1603
CviQI	GTAC	3 cut(s)	310, 863, 1603
DdeI	CTNAG	7 cut(s)	269, 444, 662, 717, 1374, 1400, 1553
DpnI	GATC	6 cut(s)	536, 743, 792, 821, 871, 1139
DpnII	GATC	6 cut(s)	534, 741, 790, 819, 869, 1137
EaeI	YGGCCR	1 cut(s)	1209
Eam1104I	CTCTTC	1 cut(s)	603
EarI	CTCTTC	1 cut(s)	603
Eco130I	CCWWGG	3 cut(s)	547, 645, 1200
Eco24I	GRGCYC	1 cut(s)	1554
Eco47I	GGWCC	2 cut(s)	439, 808
Eco57I	CTGAAG	1 cut(s)	764
Eco81I	CCTNAGG	1 cut(s)	444
Eco88I	CYCGRG	1 cut(s)	23
EcoNI	CCTNNNNNAGG	1 cut(s)	285
EcoO109I	RGGNCCY	1 cut(s)	439
EcoRII	CCWGG	1 cut(s)	411
EcoT14I	CCWWGG	3 cut(s)	547, 645, 1200
EcoT22I	ATGCAT	1 cut(s)	968
EcoT38I	GRGCYC	1 cut(s)	1554
ErhI	CCWWGG	3 cut(s)	547, 645, 1200
FaqI	GGGAC	5 cut(s)	33, 145, 243, 569, 639
FauI	CCCGC	1 cut(s)	1478
FblI	GTMKAC	1 cut(s)	1263
Fnu4HI	GCNGC	9 cut(s)	9, 388, 399, 453, 816, 1231, 1307, 1329, 1483
FriOI	GRGCYC	1 cut(s)	1554
Fsp4HI	GCNGC	9 cut(s)	9, 388, 399, 453, 816, 1231, 1307, 1329, 1483
FspBI	CTAG	4 cut(s)	152, 1181, 1497, 1666
GlaI	GCGC	4 cut(s)	814, 972, 1166, 1270
GluI	GCNGC	9 cut(s)	9, 388, 399, 453, 816, 1231, 1307, 1329, 1483
GsaI	CCCAGC	2 cut(s)	1058, 1304
GsuI	CTGGAG	4 cut(s)	808, 962, 1145, 1379
HaeIII	GGCC	4 cut(s)	274, 410, 1044, 1211
HapII	CCGG	6 cut(s)	357, 407, 1041, 1134, 1146, 1212
HgaI	GACGC	1 cut(s)	379
HhaI	GCGC	4 cut(s)	815, 973, 1167, 1271
Hin1I	GRCGYC	1 cut(s)	390
Hin6I	GCGC	4 cut(s)	813, 971, 1165, 1269
HinP1I	GCGC	4 cut(s)	813, 971, 1165, 1269
HincII	GTYRAC	2 cut(s)	243, 1264
HindII	GTYRAC	2 cut(s)	243, 1264
HinfI	GANTC	5 cut(s)	21, 189, 360, 1029, 1215
HpaI	GTTAAC	1 cut(s)	243
HpaII	CCGG	6 cut(s)	357, 407, 1041, 1134, 1146, 1212
HphI	GGTGA	5 cut(s)	487, 773, 1123, 1480, 1643
Hpy166II	GTNNAC	5 cut(s)	243, 576, 764, 1264, 1341
Hpy188I	TCNGA	6 cut(s)	172, 783, 800, 1028, 1325, 1388
Hpy188III	TCNNGA	9 cut(s)	25, 186, 661, 716, 955, 979, 1090, 1358, 1444
Hpy8I	GTNNAC	5 cut(s)	243, 576, 764, 1264, 1341
Hpy99I	CGWCG	2 cut(s)	16, 434
HpyAV	CCTTC	6 cut(s)	430, 994, 1056, 1081, 1622, 1639
HpyCH4III	ACNGT	8 cut(s)	459, 845, 862, 889, 949, 1016, 1453, 1640
HpyCH4IV	ACGT	1 cut(s)	1239
HpyF10VI	GCNNNNNNNGC	8 cut(s)	41, 387, 407, 416, 845, 1306, 1379, 1558
HpyF3I	CTNAG	7 cut(s)	269, 444, 662, 717, 1374, 1400, 1553
HpySE526I	ACGT	1 cut(s)	1239
Hsp92I	GRCGYC	1 cut(s)	390
HspAI	GCGC	4 cut(s)	813, 971, 1165, 1269
KroI	GCCGGC	1 cut(s)	406
KroNI	GCCGGC	1 cut(s)	408
KspAI	GTTAAC	1 cut(s)	243
Kzo9I	GATC	6 cut(s)	534, 741, 790, 819, 869, 1137
LguI	GCTCTTC	1 cut(s)	603
LmnI	GCTCC	8 cut(s)	328, 416, 449, 503, 876, 918, 933, 1325
Lsp1109I	GCAGC	6 cut(s)	20, 410, 464, 827, 1293, 1315
LweI	GCATC	3 cut(s)	857, 1176, 1598
MaeI	CTAG	4 cut(s)	152, 1181, 1497, 1666
MaeII	ACGT	1 cut(s)	1239
MaeIII	GTNAC	4 cut(s)	61, 517, 621, 889
MalI	GATC	6 cut(s)	536, 743, 792, 821, 871, 1139
MboI	GATC	6 cut(s)	534, 741, 790, 819, 869, 1137
MboII	GAAGA	7 cut(s)	199, 463, 590, 770, 914, 943, 1357
MflI	RGATCY	2 cut(s)	741, 1137
MhlI	GDGCHC	5 cut(s)	578, 1004, 1188, 1451, 1554
MluCI	AATT	8 cut(s)	221, 711, 774, 794, 1104, 1317, 1504, 1564
MlyI	GAGTC	3 cut(s)	15, 354, 1209
MmeI	TCCRAC	3 cut(s)	786, 1018, 1366
MnlI	CCTC	9 cut(s)	10, 273, 313, 503, 668, 721, 1169, 1456, 1565
Mph1103I	ATGCAT	1 cut(s)	968
MroNI	GCCGGC	1 cut(s)	406
MroXI	GAANNNNTTC	2 cut(s)	777, 1529
MseI	TTAA	6 cut(s)	242, 941, 1067, 1563, 1623, 1659
MslI	CAYNNNNRTG	5 cut(s)	524, 965, 1007, 1205, 1454
MspA1I	CMGCKG	2 cut(s)	387, 1482
MspI	CCGG	6 cut(s)	357, 407, 1041, 1134, 1146, 1212
MspR9I	CCNGG	4 cut(s)	413, 1041, 1135, 1147
MvaI	CCWGG	1 cut(s)	413
MvnI	CGCG	1 cut(s)	813
MwoI	GCNNNNNNNGC	8 cut(s)	41, 387, 407, 416, 845, 1306, 1379, 1558
NaeI	GCCGGC	1 cut(s)	408
NciI	CCSGG	3 cut(s)	1041, 1135, 1147
NcoI	CCATGG	2 cut(s)	547, 1200
NdeII	GATC	6 cut(s)	534, 741, 790, 819, 869, 1137
NgoMIV	GCCGGC	1 cut(s)	406
NheI	GCTAGC	1 cut(s)	1496
NlaIV	GGNNCC	6 cut(s)	324, 382, 418, 441, 878, 1139
NmuCI	GTSAC	3 cut(s)	61, 517, 621
NsiI	ATGCAT	1 cut(s)	968
NspI	RCATGY	2 cut(s)	928, 966
OliI	CACNNNNGTG	2 cut(s)	524, 1454
PaeI	GCATGC	1 cut(s)	928
PaeR7I	CTCGAG	1 cut(s)	23
PagI	TCATGA	1 cut(s)	954
PaqCI	CACCTGC	1 cut(s)	749
PasI	CCCWGGG	1 cut(s)	412
PciSI	GCTCTTC	1 cut(s)	603
PcsI	WCGNNNNNNNCGW	1 cut(s)	1421
PdiI	GCCGGC	1 cut(s)	408
PdmI	GAANNNNTTC	2 cut(s)	777, 1529
PfeI	GAWTC	2 cut(s)	189, 1029
PflFI	GACNNNGTC	2 cut(s)	100, 234
PflMI	CCANNNNNTGG	1 cut(s)	1416
PkrI	GCNGC	9 cut(s)	10, 389, 400, 454, 817, 1232, 1308, 1330, 1484
PleI	GAGTC	3 cut(s)	15, 354, 1209
PpsI	GAGTC	3 cut(s)	15, 354, 1209
Ppu21I	YACGTR	1 cut(s)	1240
PpuMI	RGGWCCY	1 cut(s)	439
Psp5II	RGGWCCY	1 cut(s)	439
Psp6I	CCWGG	1 cut(s)	411
PspFI	CCCAGC	2 cut(s)	1054, 1300
PspGI	CCWGG	1 cut(s)	411
PspN4I	GGNNCC	6 cut(s)	324, 382, 418, 441, 878, 1139
PspPI	GGNCC	4 cut(s)	409, 439, 808, 1043
PspPPI	RGGWCCY	1 cut(s)	439
PstI	CTGCAG	2 cut(s)	1311, 1333
PsuI	RGATCY	2 cut(s)	741, 1137
PsyI	GACNNNGTC	2 cut(s)	100, 234
RsaI	GTAC	3 cut(s)	311, 864, 1604
RsaNI	GTAC	3 cut(s)	310, 863, 1603
RseI	CAYNNNNRTG	5 cut(s)	524, 965, 1007, 1205, 1454
SalI	GTCGAC	1 cut(s)	1262
SapI	GCTCTTC	1 cut(s)	603
SaqAI	TTAA	6 cut(s)	242, 941, 1067, 1563, 1623, 1659
SatI	GCNGC	9 cut(s)	9, 388, 399, 453, 816, 1231, 1307, 1329, 1483
Sau3AI	GATC	6 cut(s)	534, 741, 790, 819, 869, 1137
Sau96I	GGNCC	4 cut(s)	409, 439, 808, 1043
SchI	GAGTC	3 cut(s)	15, 354, 1209
ScrFI	CCNGG	4 cut(s)	413, 1041, 1135, 1147
SduI	GDGCHC	5 cut(s)	578, 1004, 1188, 1451, 1554
SfaNI	GCATC	3 cut(s)	857, 1176, 1598
SfcI	CTRYAG	5 cut(s)	628, 671, 858, 1307, 1329
Sfr274I	CTCGAG	1 cut(s)	23
SinI	GGWCC	2 cut(s)	439, 808
SlaI	CTCGAG	1 cut(s)	23
SmiMI	CAYNNNNRTG	5 cut(s)	524, 965, 1007, 1205, 1454
SmlI	CTYRAG	3 cut(s)	23, 88, 1444
SmoI	CTYRAG	3 cut(s)	23, 88, 1444
SphI	GCATGC	1 cut(s)	928
Sse9I	AATT	8 cut(s)	221, 711, 774, 794, 1104, 1317, 1504, 1564
SspMI	CTAG	4 cut(s)	152, 1181, 1497, 1666
StyD4I	CCNGG	4 cut(s)	411, 1039, 1133, 1145
StyI	CCWWGG	3 cut(s)	547, 645, 1200
TaaI	ACNGT	8 cut(s)	459, 845, 862, 889, 949, 1016, 1453, 1640
TaiI	ACGT	1 cut(s)	1242
TaqI	TCGA	5 cut(s)	24, 185, 1123, 1263, 1424
TasI	AATT	8 cut(s)	221, 711, 774, 794, 1104, 1317, 1504, 1564
TatI	WGTACW	2 cut(s)	862, 1602
TauI	GCSGC	3 cut(s)	390, 1233, 1485
TfiI	GAWTC	2 cut(s)	189, 1029
Tru1I	TTAA	6 cut(s)	242, 941, 1067, 1563, 1623, 1659
Tru9I	TTAA	6 cut(s)	242, 941, 1067, 1563, 1623, 1659
TscAI	CASTG	7 cut(s)	320, 832, 892, 952, 1284, 1561, 1645
TseFI	GTSAC	3 cut(s)	61, 517, 621
TseI	GCWGC	6 cut(s)	8, 398, 452, 815, 1306, 1328
Tsp45I	GTSAC	3 cut(s)	61, 517, 621
TspGWI	ACGGA	1 cut(s)	29
TspRI	CASTG	7 cut(s)	320, 832, 892, 952, 1284, 1561, 1645
Tth111I	GACNNNGTC	2 cut(s)	100, 234
Van91I	CCANNNNNTGG	1 cut(s)	1416
VneI	GTGCAC	1 cut(s)	574
VpaK11BI	GGWCC	2 cut(s)	439, 808
XagI	CCTNNNNNAGG	1 cut(s)	285
XapI	RAATTY	3 cut(s)	711, 774, 1104
XceI	RCATGY	2 cut(s)	928, 966
XhoI	CTCGAG	1 cut(s)	23
XmiI	GTMKAC	1 cut(s)	1263
XmnI	GAANNNNTTC	2 cut(s)	777, 1529
XspI	CTAG	4 cut(s)	152, 1181, 1497, 1666
Zsp2I	ATGCAT	1 cut(s)	968

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.