Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000007

Orthogroup ID

OG0015565

Physical Location & Seq

Genomic Coordinates Reverse (-)

9177362 .. 9180028

Gene Structure 2667 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_7G00168280.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1524 bp

ATGGCTGCGCTGCGGTTGCCGGACAAACCCTCTGAACATCCCGGACCACTTTCCAGTAGGGTGGACTCGCCGGGATATGTCCTTTTAACTGTGCAAGCACACTATCCCCAACTGAGACCAACTCCGTGCAAATTAGATGCTGCAGAACCTCACTGCGAGGCAGCAGACAGAGGCCAACTTGCACTCCTCTACACTGGACTCTATCTAATTGCATTTGGCACCAGCGGGGTTAAATCTGCTTTACCGGCCTTGGGGGCTGATCAGTTCGATGACAAGGACCCTAAGCAGGCGGGCCAATTGTCAAGCTTCTTCAACTGGTTCTTTTTAAGCCTCACCATTGGTGCTATATTTGGCGTCACTTTCGTGGTCTGGATTAGTGCCAACCATGGCTGGGACTTGGCCTTTGGGGTCAGCACATTGGCAGTCTTTTTTGCAGTGCTCTCTCTATGTATGGGCAAATCACTCTACCGCAACAATAAAATTAATCCAAAGGGAAGCCCCCTCCTAAGTATACTACAGGTTCTTGTGGCCTCAATCCGAAACCGAAAACTTCCAATTCCAGAGAAAGCAGAGGACTTGCATGAGATCCATGACAAAGAAGCAGGGGAGGGACATGAATATCTTCAGAGAACAGAGCAATTCAAATTCTTGGACCGGGCAGCGGTCAATTATTGCCCTACTATAGAGGGTTCATCAAAATCTACAAACCCAGGAGGAGCCTGGAGCCTCTGCACAGTCACACAAGTTGAAGAAGTAAAGCTTCTAATCCGAATGCTCCCAATCATACTCAGCACTATCTTCATGAACACATGCTTGGCACAACTCCAAACTTTCTCCATCCAACAAAGCCTGACCTTGGACAGACATTTCATTGGCTTCGAAATCCCCGGCCCATCAATGCCAGTCATCCCTCTGCTCTGCATGTTTTTCCTCATCCCAATCTACGACCGAGTCTTCGTCCCACTCGTCCGAAAACTCACCGGAATTCCCACCGGCATTCGCCACCTACAGCGTATTGCAGTTGGGCTCGTGCTCTCCGTGATTTCAATGGCCATTTCAGGAATGGTAGAGACTCGCCGCAAATCCGTGGCCGTGAAACACAACATGGTCGACTCTAGTGAGCCTCTGCCAATGAGTGTGTTTTGGCTTGGTTTCCAATTTGCCATATTTGGGGCCGCAGACATGTTCACAGTAGTTGGTCTTTTGGAGTTCTTCTATGCTGAGAGCGCGGCAGGGATGAAGTCCCTGGGCACAGCCATCTCTTGGTGTTCGATTGCGTTTGGGTATTTCTTGAGCTCGGTGGTGGTCGAGACGGTGAACAAAGTGAGCGGAGGGTGGTTGGAAAGTAATAATCTTAACAGAGACAAGTTGAACTACTTCTATTGGTTGCTGTCAGGGATGAGTGTGATGAACTTTGGGGCATATTTGCTCTGTGCGTATTGGTACAAGTACAAAAAGGTTGATGTAGTGGTGCTGGAGAAGCAAGGCGATTCCGATGGCAGTGTTGAAATGATCAAAGCCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215 GO:0005319 GO:0005342 GO:0005575 GO:0005623 GO:0005886 GO:0006810 GO:0006811 GO:0006820 GO:0006869 GO:0008028 GO:0008150 GO:0008509 GO:0008514 GO:0009605 GO:0009607 GO:0009624 GO:0010119 GO:0010876 GO:0015075 GO:0015318 GO:0015665 GO:0015711 GO:0015718 GO:0015849 GO:0015850 GO:0016020 GO:0022857 GO:0033036 GO:0034220 GO:0043207 GO:0044464 GO:0046864 GO:0046865 GO:0046942 GO:0046943 GO:0050789 GO:0050794 GO:0050896 GO:0051179 GO:0051234 GO:0051704 GO:0051707 GO:0055085 GO:0065007 GO:0071702 GO:0071944 GO:0080168 GO:0090440 GO:0098656 GO:1901618 GO:1903825 GO:1905039

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PTR2

Protein Analysis

507

Amino Acids

56.02

Weight (kDa)

7.58

Isoelectric Point (pI)

34.72

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PTR2	PF00854	24 - 443	3.7e-89	POT family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0015565)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_2g40690 FvH4_2g40690
malus_domestica	MD08G1040500.v1.1
prunus_persica	Prupe.1G389100_v2.0.a1
pyrus_communis	pycom08g03270
rosa_chinensis	RchiOBHm_Chr6g0299911
rosa_laevigata	RLG00000011376
rosa_multiflora	Rmu_co8499763.1_g000001 Rmu_sc0008023.1_g000004
rosa_roxburghii	Rroxscaffold_7G00168280
rosa_rugosa	Rorug06G0293200
rosa_samantha	Rh6AG404500 Rh6BG412800 Rh6CG418900 Rh6DG405700
rosa_wichuraiana	Rw6G035400

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	218
AccB7I	CCANNNNNTGG	1 cut(s)	1263
AccBSI	CCGCTC	1 cut(s)	1329
AccI	GTMKAC	2 cut(s)	511, 1110
AccII	CGCG	1 cut(s)	1229
AciI	CCGC	9 cut(s)	13, 225, 290, 469, 662, 1078, 1176, 1229, 1329
AclWI	GGATC	1 cut(s)	580
AcoI	YGGCCR	2 cut(s)	1050, 1089
AcsI	RAATTY	2 cut(s)	644, 984
AcuI	CTGAAG	1 cut(s)	608
AcyI	GRCGYC	1 cut(s)	354
AfaI	GTAC	2 cut(s)	1445, 1451
AfiI	CCNNNNNNNGG	7 cut(s)	251, 286, 391, 661, 856, 1170, 1263
AflIII	ACRYGT	1 cut(s)	1182
AgsI	TTSAA	6 cut(s)	313, 643, 749, 1047, 1372, 1508
AjnI	CCWGG	3 cut(s)	709, 719, 1245
AjuI	GAANNNNNNNTTGG	2 cut(s)	797, 829
AleI	CACNNNNGTG	1 cut(s)	362
AluBI	AGCT	3 cut(s)	306, 760, 1296
AluI	AGCT	3 cut(s)	306, 760, 1296
Alw21I	GWGCWC	3 cut(s)	441, 1035, 1298
Alw26I	GTCTC	4 cut(s)	109, 1064, 1304, 1356
AlwI	GGATC	1 cut(s)	580
AoxI	GGCC	9 cut(s)	172, 246, 292, 399, 528, 889, 1050, 1089, 1173
ApeKI	GCWGC	5 cut(s)	5, 10, 140, 161, 659
ApoI	RAATTY	2 cut(s)	644, 984
ArsI	GACNNNNNNTTYG	4 cut(s)	386, 418, 938, 970
AseI	ATTAAT	1 cut(s)	483
Asp700I	GAANNNNTTC	2 cut(s)	621, 1376
AspLEI	GCGC	2 cut(s)	10, 1229
AspS9I	GGNCC	6 cut(s)	44, 277, 292, 652, 890, 1173
AsuC2I	CCSGG	4 cut(s)	42, 72, 656, 888
AsuHPI	GGTGA	3 cut(s)	325, 970, 1327
AsuII	TTCGAA	1 cut(s)	879
AvaII	GGWCC	3 cut(s)	44, 277, 652
BaeGI	GKGCMC	1 cut(s)	1253
BalI	TGGCCA	1 cut(s)	1052
BanI	GGYRCC	1 cut(s)	218
BanII	GRGCYC	2 cut(s)	1029, 1298
BauI	CACGAG	1 cut(s)	1028
BbsI	GAAGAC	1 cut(s)	946
Bbv12I	GWGCWC	3 cut(s)	441, 1035, 1298
BbvI	GCAGC	3 cut(s)	127, 173, 671
BccI	CCATC	4 cut(s)	845, 901, 1265, 1490
BceAI	ACGGC	1 cut(s)	1076
BciT130I	CCWGG	3 cut(s)	711, 721, 1247
BclI	TGATCA	2 cut(s)	259, 1512
BcnI	CCSGG	4 cut(s)	42, 72, 656, 888
BcoDI	GTCTC	4 cut(s)	109, 1064, 1304, 1356
BfaI	CTAG	1 cut(s)	1116
BfmI	CTRYAG	4 cut(s)	141, 515, 681, 1007
BglI	GCCNNNNNGGC	1 cut(s)	254
BisI	GCNGC	8 cut(s)	6, 11, 141, 162, 660, 1078, 1176, 1230
BlsI	GCNGC	8 cut(s)	7, 12, 142, 163, 661, 1079, 1177, 1231
Bme1390I	CCNGG	7 cut(s)	42, 72, 656, 711, 721, 888, 1247
Bme18I	GGWCC	3 cut(s)	44, 277, 652
BmgT120I	GGNCC	6 cut(s)	44, 277, 292, 652, 890, 1173
BmiI	GGNNCC	5 cut(s)	220, 279, 718, 725, 1174
BmrFI	CCNGG	7 cut(s)	42, 72, 656, 711, 721, 888, 1247
BmsI	GCATC	1 cut(s)	127
BpiI	GAAGAC	1 cut(s)	946
BplI	GAGNNNNNCTC	2 cut(s)	106, 138
BpmI	CTGGAG	2 cut(s)	742, 1496
Bpu10I	CCTNAGC	1 cut(s)	282
Bpu14I	TTCGAA	1 cut(s)	879
BpuEI	CTTGAG	1 cut(s)	1312
BpuMI	CCSGG	4 cut(s)	42, 72, 656, 888
BsaHI	GRCGYC	1 cut(s)	354
BsaI	GGTCTC	1 cut(s)	109
BsaJI	CCNNGG	8 cut(s)	249, 385, 709, 855, 886, 1086, 1245, 1246
BsaWI	WCCGGW	1 cut(s)	980
BsaXI	ACNNNNNCTCC	2 cut(s)	168, 198
Bsc4I	CCNNNNNNNGG	7 cut(s)	251, 286, 391, 661, 856, 1170, 1263
Bse118I	RCCGGY	2 cut(s)	244, 992
Bse1I	ACTGG	4 cut(s)	54, 199, 320, 902
BseBI	CCWGG	3 cut(s)	711, 721, 1247
BseDI	CCNNGG	8 cut(s)	249, 385, 709, 855, 886, 1086, 1245, 1246
BseGI	GGATG	6 cut(s)	37, 837, 906, 933, 1242, 1404
BseLI	CCNNNNNNNGG	7 cut(s)	251, 286, 391, 661, 856, 1170, 1263
BseMII	CTCAG	3 cut(s)	104, 802, 1212
BseNI	ACTGG	4 cut(s)	54, 199, 320, 902
BseRI	GAGGAG	2 cut(s)	176, 729
BseSI	GKGCMC	1 cut(s)	1253
BseXI	GCAGC	3 cut(s)	127, 173, 671
BseYI	CCCAGC	1 cut(s)	390
BsgI	GTGCAG	1 cut(s)	715
Bsh1236I	CGCG	1 cut(s)	1229
Bsh1285I	CGRYCG	1 cut(s)	949
BshFI	GGCC	9 cut(s)	174, 248, 294, 401, 530, 891, 1052, 1091, 1175
BshNI	GGYRCC	1 cut(s)	218
BsiEI	CGRYCG	1 cut(s)	949
BsiHKAI	GWGCWC	3 cut(s)	441, 1035, 1298
BsiSI	CCGG	8 cut(s)	20, 42, 71, 245, 655, 888, 981, 993
BslFI	GGGAC	4 cut(s)	407, 624, 944, 1228
BslI	CCNNNNNNNGG	7 cut(s)	251, 286, 391, 661, 856, 1170, 1263
BsmAI	GTCTC	4 cut(s)	109, 1064, 1304, 1356
BsmBI	CGTCTC	1 cut(s)	1304
BsmFI	GGGAC	4 cut(s)	407, 624, 944, 1228
BsmI	GAATGC	2 cut(s)	777, 996
BsnI	GGCC	9 cut(s)	174, 248, 294, 401, 530, 891, 1052, 1091, 1175
Bso31I	GGTCTC	1 cut(s)	109
Bsp119I	TTCGAA	1 cut(s)	879
Bsp1286I	GDGCHC	5 cut(s)	441, 1029, 1035, 1253, 1298
Bsp143I	GATC	3 cut(s)	259, 585, 1512
Bsp19I	CCATGG	1 cut(s)	385
BspACI	CCGC	9 cut(s)	13, 225, 290, 469, 662, 1078, 1176, 1229, 1329
BspANI	GGCC	9 cut(s)	174, 248, 294, 401, 530, 891, 1052, 1091, 1175
BspCNI	CTCAG	3 cut(s)	105, 801, 1213
BspFNI	CGCG	1 cut(s)	1229
BspHI	TCATGA	1 cut(s)	801
BspLI	GGNNCC	5 cut(s)	220, 279, 718, 725, 1174
BspMAI	CTGCAG	1 cut(s)	145
BspPI	GGATC	1 cut(s)	580
BspT104I	TTCGAA	1 cut(s)	879
BspT107I	GGYRCC	1 cut(s)	218
BspTNI	GGTCTC	1 cut(s)	109
BsrBI	CCGCTC	1 cut(s)	1329
BsrFI	RCCGGY	2 cut(s)	244, 992
BsrI	ACTGG	4 cut(s)	54, 199, 320, 902
BssAI	RCCGGY	2 cut(s)	244, 992
BssECI	CCNNGG	8 cut(s)	249, 385, 709, 855, 886, 1086, 1245, 1246
BssMI	GATC	3 cut(s)	259, 585, 1512
BssNAI	GTATAC	1 cut(s)	512
BssNI	GRCGYC	1 cut(s)	354
BssSI	CACGAG	1 cut(s)	1028
BssT1I	CCWWGG	3 cut(s)	249, 385, 855
Bst1107I	GTATAC	1 cut(s)	512
Bst2BI	CACGAG	1 cut(s)	1028
Bst2UI	CCWGG	3 cut(s)	711, 721, 1247
Bst4CI	ACNGT	4 cut(s)	91, 736, 1192, 1315
BstACI	GRCGYC	1 cut(s)	354
BstBI	TTCGAA	1 cut(s)	879
BstC8I	GCNNGC	3 cut(s)	96, 288, 292
BstDEI	CTNAG	5 cut(s)	113, 282, 506, 788, 1221
BstDSI	CCRYGG	2 cut(s)	385, 1086
BstF5I	GGATG	6 cut(s)	37, 837, 906, 933, 1242, 1404
BstFNI	CGCG	1 cut(s)	1229
BstHHI	GCGC	2 cut(s)	10, 1229
BstKTI	GATC	3 cut(s)	262, 588, 1515
BstMAI	GTCTC	4 cut(s)	109, 1064, 1304, 1356
BstMBI	GATC	3 cut(s)	259, 585, 1512
BstMCI	CGRYCG	1 cut(s)	949
BstMWI	GCNNNNNNNGC	5 cut(s)	16, 245, 254, 1226, 1480
BstNI	CCWGG	3 cut(s)	711, 721, 1247
BstNSI	RCATGY	3 cut(s)	813, 925, 1186
BstSCI	CCNGG	7 cut(s)	40, 70, 654, 709, 719, 886, 1245
BstSFI	CTRYAG	4 cut(s)	141, 515, 681, 1007
BstSLI	GKGCMC	1 cut(s)	1253
BstUI	CGCG	1 cut(s)	1229
BstV1I	GCAGC	3 cut(s)	127, 173, 671
BstV2I	GAAGAC	1 cut(s)	946
BstX2I	RGATCY	1 cut(s)	585
BstXI	CCANNNNNNTGG	1 cut(s)	61
BstYI	RGATCY	1 cut(s)	585
BstZ17I	GTATAC	1 cut(s)	512
BsuRI	GGCC	9 cut(s)	174, 248, 294, 401, 530, 891, 1052, 1091, 1175
BtgI	CCRYGG	2 cut(s)	385, 1086
BtsCI	GGATG	6 cut(s)	37, 837, 906, 933, 1242, 1404
BtsI	GCAGTG	3 cut(s)	151, 441, 1507
BtsIMutI	CAGTG	4 cut(s)	151, 192, 441, 1507
Cac8I	GCNNGC	3 cut(s)	96, 288, 292
CciI	TCATGA	1 cut(s)	801
CfoI	GCGC	2 cut(s)	10, 1229
Cfr10I	RCCGGY	2 cut(s)	244, 992
Cfr13I	GGNCC	6 cut(s)	44, 277, 292, 652, 890, 1173
CseI	GACGC	1 cut(s)	343
Csp6I	GTAC	2 cut(s)	1444, 1450
CviAII	CATG	9 cut(s)	386, 581, 590, 614, 802, 810, 922, 1105, 1183
CviQI	GTAC	2 cut(s)	1444, 1450
DdeI	CTNAG	5 cut(s)	113, 282, 506, 788, 1221
DpnI	GATC	3 cut(s)	261, 587, 1514
DpnII	GATC	3 cut(s)	259, 585, 1512
EaeI	YGGCCR	2 cut(s)	1050, 1089
Ecl136II	GAGCTC	1 cut(s)	1296
Eco130I	CCWWGG	3 cut(s)	249, 385, 855
Eco24I	GRGCYC	2 cut(s)	1029, 1298
Eco31I	GGTCTC	1 cut(s)	109
Eco47I	GGWCC	3 cut(s)	44, 277, 652
Eco53kI	GAGCTC	1 cut(s)	1296
Eco57I	CTGAAG	1 cut(s)	608
EcoICRI	GAGCTC	1 cut(s)	1296
EcoO109I	RGGNCCY	1 cut(s)	277
EcoRI	GAATTC	1 cut(s)	984
EcoRII	CCWGG	3 cut(s)	709, 719, 1245
EcoT14I	CCWWGG	3 cut(s)	249, 385, 855
EcoT38I	GRGCYC	2 cut(s)	1029, 1298
ErhI	CCWWGG	3 cut(s)	249, 385, 855
Esp3I	CGTCTC	1 cut(s)	1304
FaeI	CATG	9 cut(s)	389, 584, 593, 617, 805, 813, 925, 1108, 1186
FalI	AAGNNNNNCTT	2 cut(s)	744, 776
FaqI	GGGAC	4 cut(s)	407, 624, 944, 1228
FatI	CATG	9 cut(s)	385, 580, 589, 613, 801, 809, 921, 1104, 1182
FauI	CCCGC	2 cut(s)	218, 283
FbaI	TGATCA	2 cut(s)	259, 1512
FblI	GTMKAC	2 cut(s)	511, 1110
Fnu4HI	GCNGC	8 cut(s)	6, 11, 141, 162, 660, 1078, 1176, 1230
FokI	GGATG	6 cut(s)	24, 824, 893, 920, 1249, 1411
FriOI	GRGCYC	2 cut(s)	1029, 1298
Fsp4HI	GCNGC	8 cut(s)	6, 11, 141, 162, 660, 1078, 1176, 1230
FspBI	CTAG	1 cut(s)	1116
GlaI	GCGC	2 cut(s)	9, 1228
GluI	GCNGC	8 cut(s)	6, 11, 141, 162, 660, 1078, 1176, 1230
GsaI	CCCAGC	1 cut(s)	394
GsuI	CTGGAG	2 cut(s)	742, 1496
HaeIII	GGCC	9 cut(s)	174, 248, 294, 401, 530, 891, 1052, 1091, 1175
HapII	CCGG	8 cut(s)	20, 42, 71, 245, 655, 888, 981, 993
HgaI	GACGC	1 cut(s)	343
HhaI	GCGC	2 cut(s)	10, 1229
Hin1I	GRCGYC	1 cut(s)	354
Hin1II	CATG	9 cut(s)	389, 584, 593, 617, 805, 813, 925, 1108, 1186
Hin6I	GCGC	2 cut(s)	8, 1227
HinP1I	GCGC	2 cut(s)	8, 1227
HincII	GTYRAC	1 cut(s)	1111
HindII	GTYRAC	1 cut(s)	1111
HindIII	AAGCTT	2 cut(s)	304, 758
HinfI	GANTC	6 cut(s)	65, 198, 951, 1072, 1112, 1490
HpaII	CCGG	8 cut(s)	20, 42, 71, 245, 655, 888, 981, 993
HphI	GGTGA	3 cut(s)	325, 970, 1327
Hpy166II	GTNNAC	5 cut(s)	64, 512, 1111, 1188, 1318
Hpy188I	TCNGA	6 cut(s)	34, 539, 627, 770, 971, 1495
Hpy188III	TCNNGA	6 cut(s)	370, 560, 802, 1059, 1291, 1309
Hpy8I	GTNNAC	5 cut(s)	64, 512, 1111, 1188, 1318
HpyCH4III	ACNGT	4 cut(s)	91, 736, 1192, 1315
HpyF10VI	GCNNNNNNNGC	5 cut(s)	16, 245, 254, 1226, 1480
HpyF3I	CTNAG	5 cut(s)	113, 282, 506, 788, 1221
Hsp92I	GRCGYC	1 cut(s)	354
Hsp92II	CATG	9 cut(s)	389, 584, 593, 617, 805, 813, 925, 1108, 1186
HspAI	GCGC	2 cut(s)	8, 1227
Ksp22I	TGATCA	2 cut(s)	259, 1512
Kzo9I	GATC	3 cut(s)	259, 585, 1512
LmnI	GCTCC	3 cut(s)	716, 723, 780
Lsp1109I	GCAGC	3 cut(s)	127, 173, 671
LweI	GCATC	1 cut(s)	127
MaeI	CTAG	1 cut(s)	1116
MaeIII	GTNAC	2 cut(s)	355, 736
MalI	GATC	3 cut(s)	261, 587, 1514
MbiI	CCGCTC	1 cut(s)	1329
MboI	GATC	3 cut(s)	259, 585, 1512
MboII	GAAGA	6 cut(s)	301, 614, 761, 790, 946, 1204
MfeI	CAATTG	1 cut(s)	296
MflI	RGATCY	1 cut(s)	585
MhlI	GDGCHC	5 cut(s)	441, 1029, 1035, 1253, 1298
MlsI	TGGCCA	1 cut(s)	1052
MluNI	TGGCCA	1 cut(s)	1052
MlyI	GAGTC	5 cut(s)	59, 192, 960, 1066, 1106
MmeI	TCCRAC	2 cut(s)	865, 1320
Mox20I	TGGCCA	1 cut(s)	1052
MroXI	GAANNNNTTC	2 cut(s)	621, 1376
MscI	TGGCCA	1 cut(s)	1052
MseI	TTAA	5 cut(s)	86, 231, 326, 483, 1356
MslI	CAYNNNNRTG	1 cut(s)	362
Msp20I	TGGCCA	1 cut(s)	1052
MspA1I	CMGCKG	2 cut(s)	225, 662
MspI	CCGG	8 cut(s)	20, 42, 71, 245, 655, 888, 981, 993
MspR9I	CCNGG	7 cut(s)	42, 72, 656, 711, 721, 888, 1247
MunI	CAATTG	1 cut(s)	296
Mva1269I	GAATGC	2 cut(s)	777, 996
MvaI	CCWGG	3 cut(s)	711, 721, 1247
MvnI	CGCG	1 cut(s)	1229
MwoI	GCNNNNNNNGC	5 cut(s)	16, 245, 254, 1226, 1480
NciI	CCSGG	4 cut(s)	42, 72, 656, 888
NcoI	CCATGG	1 cut(s)	385
NdeII	GATC	3 cut(s)	259, 585, 1512
NlaIII	CATG	9 cut(s)	389, 584, 593, 617, 805, 813, 925, 1108, 1186
NlaIV	GGNNCC	5 cut(s)	220, 279, 718, 725, 1174
NmuCI	GTSAC	2 cut(s)	355, 736
NspI	RCATGY	3 cut(s)	813, 925, 1186
NspV	TTCGAA	1 cut(s)	879
OliI	CACNNNNGTG	1 cut(s)	362
PagI	TCATGA	1 cut(s)	801
PasI	CCCWGGG	1 cut(s)	1246
PciI	ACATGT	1 cut(s)	1182
PcsI	WCGNNNNNNNCGW	2 cut(s)	963, 1035
PctI	GAATGC	2 cut(s)	777, 996
PdmI	GAANNNNTTC	2 cut(s)	621, 1376
PfeI	GAWTC	1 cut(s)	1490
PflFI	GACNNNGTC	1 cut(s)	950
PflMI	CCANNNNNTGG	1 cut(s)	1263
PfoI	TCCNGGA	1 cut(s)	40
PkrI	GCNGC	8 cut(s)	7, 12, 142, 163, 661, 1079, 1177, 1231
PleI	GAGTC	5 cut(s)	59, 192, 959, 1066, 1106
PpsI	GAGTC	5 cut(s)	59, 192, 959, 1066, 1106
PpuMI	RGGWCCY	1 cut(s)	277
PscI	ACATGT	1 cut(s)	1182
PshBI	ATTAAT	1 cut(s)	483
Psp124BI	GAGCTC	1 cut(s)	1298
Psp5II	RGGWCCY	1 cut(s)	277
Psp6I	CCWGG	3 cut(s)	709, 719, 1245
PspFI	CCCAGC	1 cut(s)	390
PspGI	CCWGG	3 cut(s)	709, 719, 1245
PspN4I	GGNNCC	5 cut(s)	220, 279, 718, 725, 1174
PspPI	GGNCC	6 cut(s)	44, 277, 292, 652, 890, 1173
PspPPI	RGGWCCY	1 cut(s)	277
PstI	CTGCAG	1 cut(s)	145
PsuI	RGATCY	1 cut(s)	585
PsyI	GACNNNGTC	1 cut(s)	950
RsaI	GTAC	2 cut(s)	1445, 1451
RsaNI	GTAC	2 cut(s)	1444, 1450
RseI	CAYNNNNRTG	1 cut(s)	362
SacI	GAGCTC	1 cut(s)	1298
SalI	GTCGAC	1 cut(s)	1109
SaqAI	TTAA	5 cut(s)	86, 231, 326, 483, 1356
SatI	GCNGC	8 cut(s)	6, 11, 141, 162, 660, 1078, 1176, 1230
Sau3AI	GATC	3 cut(s)	259, 585, 1512
Sau96I	GGNCC	6 cut(s)	44, 277, 292, 652, 890, 1173
SchI	GAGTC	5 cut(s)	59, 192, 960, 1066, 1106
ScrFI	CCNGG	7 cut(s)	42, 72, 656, 711, 721, 888, 1247
SduI	GDGCHC	5 cut(s)	441, 1029, 1035, 1253, 1298
SetI	ASST	8 cut(s)	151, 308, 522, 762, 857, 1008, 1298, 1461
SfaNI	GCATC	1 cut(s)	127
SfcI	CTRYAG	4 cut(s)	141, 515, 681, 1007
SfuI	TTCGAA	1 cut(s)	879
SinI	GGWCC	3 cut(s)	44, 277, 652
SmiMI	CAYNNNNRTG	1 cut(s)	362
SmlI	CTYRAG	1 cut(s)	1291
SmoI	CTYRAG	1 cut(s)	1291
SsiI	CCGC	9 cut(s)	13, 225, 290, 469, 662, 1078, 1176, 1229, 1329
SspMI	CTAG	1 cut(s)	1116
SstI	GAGCTC	1 cut(s)	1298
StyD4I	CCNGG	7 cut(s)	40, 70, 654, 709, 719, 886, 1245
StyI	CCWWGG	3 cut(s)	249, 385, 855
TaaI	ACNGT	4 cut(s)	91, 736, 1192, 1315
TaqI	TCGA	5 cut(s)	267, 879, 1110, 1271, 1308
TaqII	GACCGA	1 cut(s)	963
TatI	WGTACW	1 cut(s)	1449
TauI	GCSGC	3 cut(s)	1080, 1178, 1232
TfiI	GAWTC	1 cut(s)	1490
Tru1I	TTAA	5 cut(s)	86, 231, 326, 483, 1356
Tru9I	TTAA	5 cut(s)	86, 231, 326, 483, 1356
TscAI	CASTG	4 cut(s)	158, 199, 441, 1507
TseFI	GTSAC	2 cut(s)	355, 736
TseI	GCWGC	5 cut(s)	5, 10, 140, 161, 659
Tsp45I	GTSAC	2 cut(s)	355, 736
TspDTI	ATGAA	7 cut(s)	630, 681, 790, 818, 859, 1253, 1424
TspGWI	ACGGA	3 cut(s)	114, 1027, 1075
TspRI	CASTG	4 cut(s)	158, 199, 441, 1507
Tth111I	GACNNNGTC	1 cut(s)	950
Van91I	CCANNNNNTGG	1 cut(s)	1263
VpaK11BI	GGWCC	3 cut(s)	44, 277, 652
VspI	ATTAAT	1 cut(s)	483
XapI	RAATTY	2 cut(s)	644, 984
XceI	RCATGY	3 cut(s)	813, 925, 1186
XcmI	CCANNNNNNNNNTGG	2 cut(s)	717, 1060
XmiI	GTMKAC	2 cut(s)	511, 1110
XmnI	GAANNNNTTC	2 cut(s)	621, 1376
XspI	CTAG	1 cut(s)	1116

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.