MD08G1135300.v1.1

SWIM zinc finger family protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr08
OG0016270
Physical Location & Seq
Reverse (-)
12847615 .. 12852159
4545 bp
Loading structure...
UTR
Exon/CDS
Intron
MD08G1135300.v1.1.491

Sequence Viewer

Length: 2091 bp
ATGAAGGGCCATGAACACAAGATGGCAAGAATGGAGGACATTCTAAACCTTCCGGTACAAGATCCTCCGTGTGCCGAGTTTTCTGCTACTCATATTAAGTGGGTGAAAGTGGAAGGCGGTCGCCAAGGCGGCGATGATATTGCCCTAATCCCATTTGCTAGGGTGGGTGATTTTGTAAAAGGAGAATCTTCAAATGCTGAATGCCCTGCCAGCTTCCGCGTCGAGTCAAGAAGGAAGAGACCTGAGGGGAGCATCAGCAAGCCAAGGGTTGACGGTTATCTTGAATATACACTATACTGGTGTTCATATGGTCCTGAAGACTACCGAGAGAATGAATCTGGTCTGATGGATGGTTCTAGTACAAAGCCCGCATCCGGAAAGGGAAGCAGGCCTGGAAGGCGTCACATGATGAGAGGCTGCCTATGCCATTTCACTGTAAAGCGGTTATATACCCGGCCACTCCTTGCTCTCATCATCTATAACCAGAGAAATCATGTAGATAAGTCAGGATCTCCATGCCATGGTATACTTGATCAGGATGCTATGGGAACGAGAGCCATGTATGCTCCACGAATATCAGAGGAGCAACGCCAGAAAGTGATGTCTATGCTTTATGTTGGAATTCCTTTGGACAATATAATTCAGCATCACATGGAGCTGGTCGAGGGGCATGGTGGACCTCATAACCGTGATGATTTTCTAAGTCGCAACGATGTTCGAAACATGGAAAGGGGGATTCGTAATTCTTCTCCTCAGTTACATCCAAATGATGGATGCAGTATAAAGATGTGGGTTCAACGCCATCGCAAGCATGTTTTCTACTTTCAAGATAGCTCTGTTTCAGAGCCATTTGTTTTAGGGATACAGACAGATTGGCAGCTGCAACAGATGCTCCAGTATGGACATAATAATTACATAGCTGTCCATTCAACATTTGGTTTAAAAAAACTTAAGTATCCGTTGTGTACATTACTTGTTTTCAACCCATCTCGGAATGCCATACCAGTTGCTTGGATCATTACCTCCTCTTTCATCAGTCAAGATATCCACAAGTGGATTGGGCCACTGGCTGAAAGAGTCCGAACGAAGGACCCAGGATGGAGACCTGATTCCTTTTTAGTGGATGATCCTTCCTTTGAGATTTCTATATTAAGGGAGGCTTTCCAATGCCGGGTCTTATTATGTAACTGGCATGCTCGGCATTCTTGGATAAGACGGATTTTAAAGACATGCTGCAACTTTGATGTGCAGCGAGAGGTATTTAAGCAGTTAGGCTGGCTTTTGTATAGCACAAGGAGTGGGTCGAATGCTATGGATGCAGTTGAGGAGTTTATGCAAGTATTTGTTGATCAATGTGCCTTTATGGATTATTTTAAGAGGCGATGGTTACCAAATTTAGAGTTGTGGGTGAATTGCATAAGGTCTCTTCCTGTGGCCAGTCCAGAGCCAAATGCTGCAATTGAGTCCTATCATGCGAGGTTGAAATCCAAGCTTTTCAATGAACAATATGCGAATTCCTGGTTGAGAGTCGACTGGTTGATACACACACTCACAACTGAATTTCACTCTTCGTATTGGTTAGACCAATATAGCATGGAGACTGGGTATTTTGAAAATTTGAGGGACAAGTCTTTTTCAACGAATGCTTGGTATCAGGCATTGCAGATCCTAGATGTTGATGTCATACTAGATGAGCAAAATCTTCAGTATGCAAAGGTCATCTCACAAACAGACAGAAGCCTGGCATACACTATCTGGAACCCTGGTTCGGAATTCTCATTCTGTGATTGCCCTTCGTCAAGGCTGGGAAATCTCTGTAAGCATGTCATCAAGGTAGCGATCTCATGTAAAGATCGGCAGGTTGCAAGACCATTATTGGCTGCTCAAGTTTATCGGCAGACCTTGCTTACTCTTCTTCAAAATATCCCAGATGATCCTCTAGTTCTTGATCATGCCATTTTACATGCGACCCGTTTGCAACAGGACATTAAAGCCTTGGAAGTATTGTCTAATAGTGGTTTGCTCCAGCCTTTAACTTCAGAGATTAATTCACATGTAACAGACAATGTACTTTTTCCTCATCTTGATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
MULE SWIM

Protein Analysis

697

Amino Acids

80.18

Weight (kDa)

7.83

Isoelectric Point (pI)

50.47

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0016270)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g30231 FvH4_2g30231
malus_domestica MD08G1135300.v1.1
prunus_persica Prupe.1G465300_v2.0.a1
pyrus_communis pycom08g11430
rosa_chinensis RchiOBHm_Chr6g0312571 RchiOBHm_Chr6g0312641
rosa_laevigata RLG00000010308
rosa_multiflora Rmu_sc0002859.1_g000006 Rmu_ssc0000412.1_g000004
rosa_roxburghii Rroxscaffold_7G00156620
rosa_rugosa Rorug06G0397900
rosa_samantha Rh6AG515200 Rh6CG530100
rosa_wichuraiana Rw6G044770

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1849
AccB7I CCANNNNNTGG 2 cut(s) 521, 770
AccI GTMKAC 2 cut(s) 526, 1530
AccII CGCG 1 cut(s) 219
AccIII TCCGGA 1 cut(s) 374
AciI CCGC 5 cut(s) 117, 129, 217, 369, 442
AclWI GGATC 6 cut(s) 56, 517, 1022, 1121, 1660, 1928
AcoI YGGCCR 2 cut(s) 455, 1434
AcsI RAATTY 6 cut(s) 621, 1393, 1513, 1559, 1615, 1772
AcuI CTGAAG 3 cut(s) 336, 1688, 2022
AcyI GRCGYC 1 cut(s) 400
AfaI GTAC 4 cut(s) 57, 361, 967, 2070
AfiI CCNNNNNNNGG 6 cut(s) 374, 521, 770, 1087, 1171, 1768
AflII CTTAAG 1 cut(s) 950
AflIII ACRYGT 1 cut(s) 2053
AjnI CCWGG 5 cut(s) 391, 1093, 1517, 1740, 1762
AloI GAACNNNNNNTCC 2 cut(s) 1750, 1782
AluBI AGCT 6 cut(s) 213, 658, 834, 880, 920, 1492
AluI AGCT 6 cut(s) 213, 658, 834, 880, 920, 1492
Alw26I GTCTC 4 cut(s) 232, 1096, 1428, 1592
AlwI GGATC 6 cut(s) 56, 517, 1022, 1121, 1660, 1928
Aor13HI TCCGGA 1 cut(s) 374
AoxI GGCC 5 cut(s) 7, 389, 455, 1061, 1434
ApeKI GCWGC 7 cut(s) 417, 877, 880, 1233, 1249, 1454, 1880
ApoI RAATTY 6 cut(s) 621, 1393, 1513, 1559, 1615, 1772
AseI ATTAAT 1 cut(s) 2046
AspS9I GGNCC 5 cut(s) 7, 311, 677, 1061, 1090
AsuC2I CCSGG 2 cut(s) 454, 1172
AsuHPI GGTGA 3 cut(s) 115, 179, 1420
AsuII TTCGAA 1 cut(s) 718
AvaII GGWCC 3 cut(s) 311, 677, 1090
AxyI CCTNAGG 1 cut(s) 243
BaeI ACNNNNGTAYC 2 cut(s) 938, 971
BalI TGGCCA 1 cut(s) 1436
BbsI GAAGAC 1 cut(s) 324
BbvI GCAGC 7 cut(s) 404, 867, 889, 1220, 1261, 1441, 1867
BccI CCATC 8 cut(s) 16, 340, 344, 764, 810, 994, 1092, 1377
BcgI CGANNNNNNTGC 6 cut(s) 65, 99, 122, 156, 1957, 1991
BciT130I CCWGG 5 cut(s) 393, 1095, 1519, 1742, 1764
BciVI GTATCC 2 cut(s) 855, 966
BclI TGATCA 3 cut(s) 532, 1348, 1948
BcnI CCSGG 2 cut(s) 454, 1172
BcoDI GTCTC 4 cut(s) 232, 1096, 1428, 1592
BfaI CTAG 5 cut(s) 159, 357, 1670, 1688, 1940
BfrI CTTAAG 1 cut(s) 950
BfuAI ACCTGC 1 cut(s) 1849
BfuI GTATCC 2 cut(s) 855, 966
BglI GCCNNNNNGGC 2 cut(s) 129, 397
BisI GCNGC 8 cut(s) 130, 418, 878, 881, 1234, 1250, 1455, 1881
BlsI GCNGC 8 cut(s) 131, 419, 879, 882, 1235, 1251, 1456, 1882
Bme1390I CCNGG 7 cut(s) 393, 454, 1095, 1172, 1519, 1742, 1764
Bme18I GGWCC 3 cut(s) 311, 677, 1090
BmgT120I GGNCC 5 cut(s) 7, 311, 677, 1061, 1090
BmiI GGNNCC 2 cut(s) 1092, 1760
BmrFI CCNGG 7 cut(s) 393, 454, 1095, 1172, 1519, 1742, 1764
BmrI ACTGGG 1 cut(s) 1611
BmsI GCATC 7 cut(s) 261, 380, 529, 655, 764, 879, 1306
BmuI ACTGGG 1 cut(s) 1611
BpiI GAAGAC 1 cut(s) 324
BpmI CTGGAG 2 cut(s) 878, 2009
Bpu14I TTCGAA 1 cut(s) 718
BpuEI CTTGAG 1 cut(s) 1869
BpuMI CCSGG 2 cut(s) 454, 1172
BsaHI GRCGYC 1 cut(s) 400
BsaI GGTCTC 3 cut(s) 232, 1096, 1428
BsaJI CCNNGG 6 cut(s) 124, 263, 520, 1093, 1762, 1995
BsaWI WCCGGW 2 cut(s) 52, 374
BsaXI ACNNNNNCTCC 4 cut(s) 876, 906, 1589, 1619
Bsc4I CCNNNNNNNGG 6 cut(s) 374, 521, 770, 1087, 1171, 1768
Bse1I ACTGG 8 cut(s) 302, 895, 1004, 1071, 1193, 1437, 1538, 1606
Bse21I CCTNAGG 1 cut(s) 243
Bse3DI GCAATG 1 cut(s) 1658
BseAI TCCGGA 1 cut(s) 374
BseBI CCWGG 5 cut(s) 393, 1095, 1519, 1742, 1764
BseDI CCNNGG 6 cut(s) 124, 263, 520, 1093, 1762, 1995
BseGI GGATG 8 cut(s) 355, 371, 544, 760, 779, 1103, 1129, 1321
BseLI CCNNNNNNNGG 6 cut(s) 374, 521, 770, 1087, 1171, 1768
BseMI GCAATG 1 cut(s) 1658
BseMII CTCAG 2 cut(s) 234, 767
BseNI ACTGG 8 cut(s) 302, 895, 1004, 1071, 1193, 1437, 1538, 1606
BseRI GAGGAG 4 cut(s) 596, 741, 1015, 1340
BseXI GCAGC 7 cut(s) 404, 867, 889, 1220, 1261, 1441, 1867
BseYI CCCAGC 1 cut(s) 1804
BsgI GTGCAG 1 cut(s) 1268
Bsh1236I CGCG 1 cut(s) 219
Bsh1285I CGRYCG 1 cut(s) 121
BshFI GGCC 5 cut(s) 9, 391, 457, 1063, 1436
BsiEI CGRYCG 1 cut(s) 121
BsiSI CCGG 4 cut(s) 53, 375, 454, 1171
BslFI GGGAC 1 cut(s) 1637
BslI CCNNNNNNNGG 6 cut(s) 374, 521, 770, 1087, 1171, 1768
BsmAI GTCTC 4 cut(s) 232, 1096, 1428, 1592
BsmFI GGGAC 1 cut(s) 1637
BsmI GAATGC 5 cut(s) 206, 1000, 1201, 1312, 1648
BsnI GGCC 5 cut(s) 9, 391, 457, 1063, 1436
Bso31I GGTCTC 3 cut(s) 232, 1096, 1428
Bsp119I TTCGAA 1 cut(s) 718
Bsp13I TCCGGA 1 cut(s) 374
Bsp1407I TGTACA 1 cut(s) 965
Bsp19I CCATGG 1 cut(s) 520
BspACI CCGC 5 cut(s) 117, 129, 217, 369, 442
BspANI GGCC 5 cut(s) 9, 391, 457, 1063, 1436
BspCNI CTCAG 2 cut(s) 235, 766
BspEI TCCGGA 1 cut(s) 374
BspFNI CGCG 1 cut(s) 219
BspLI GGNNCC 2 cut(s) 1092, 1760
BspMI ACCTGC 1 cut(s) 1849
BspPI GGATC 6 cut(s) 56, 517, 1022, 1121, 1660, 1928
BspT104I TTCGAA 1 cut(s) 718
BspTI CTTAAG 1 cut(s) 950
BspTNI GGTCTC 3 cut(s) 232, 1096, 1428
BsrDI GCAATG 1 cut(s) 1658
BsrGI TGTACA 1 cut(s) 965
BsrI ACTGG 8 cut(s) 302, 895, 1004, 1071, 1193, 1437, 1538, 1606
BssECI CCNNGG 6 cut(s) 124, 263, 520, 1093, 1762, 1995
BssNAI GTATAC 1 cut(s) 527
BssNI GRCGYC 1 cut(s) 400
BssT1I CCWWGG 4 cut(s) 124, 263, 520, 1995
Bst1107I GTATAC 1 cut(s) 527
Bst2UI CCWGG 5 cut(s) 393, 1095, 1519, 1742, 1764
Bst4CI ACNGT 3 cut(s) 275, 436, 689
Bst6I CTCTTC 4 cut(s) 230, 1431, 1573, 1917
BstACI GRCGYC 1 cut(s) 400
BstAFI CTTAAG 1 cut(s) 950
BstAPI GCANNNNNTGC 2 cut(s) 889, 1903
BstAUI TGTACA 1 cut(s) 965
BstBI TTCGAA 1 cut(s) 718
BstC8I GCNNGC 7 cut(s) 211, 260, 369, 389, 809, 1194, 1277
BstDEI CTNAG 3 cut(s) 243, 701, 753
BstDSI CCRYGG 1 cut(s) 520
BstEII GGTNACC 1 cut(s) 1386
BstF5I GGATG 8 cut(s) 355, 371, 544, 760, 779, 1103, 1129, 1321
BstFNI CGCG 1 cut(s) 219
BstMAI GTCTC 4 cut(s) 232, 1096, 1428, 1592
BstMCI CGRYCG 1 cut(s) 121
BstMWI GCNNNNNNNGC 9 cut(s) 129, 210, 397, 423, 563, 889, 1198, 1316, 1903
BstNI CCWGG 5 cut(s) 393, 1095, 1519, 1742, 1764
BstNSI RCATGY 6 cut(s) 815, 1196, 1233, 1826, 1967, 2057
BstPI GGTNACC 1 cut(s) 1386
BstSCI CCNGG 7 cut(s) 391, 452, 1093, 1170, 1517, 1740, 1762
BstUI CGCG 1 cut(s) 219
BstV1I GCAGC 7 cut(s) 404, 867, 889, 1220, 1261, 1441, 1867
BstV2I GAAGAC 1 cut(s) 324
BstX2I RGATCY 3 cut(s) 61, 509, 1665
BstXI CCANNNNNNTGG 1 cut(s) 1011
BstYI RGATCY 3 cut(s) 61, 509, 1665
BstZ17I GTATAC 1 cut(s) 527
Bsu36I CCTNAGG 1 cut(s) 243
BsuI GTATCC 2 cut(s) 855, 966
BsuRI GGCC 5 cut(s) 9, 391, 457, 1063, 1436
BtgI CCRYGG 1 cut(s) 520
BtgZI GCGATG 3 cut(s) 147, 788, 1396
BtsCI GGATG 8 cut(s) 355, 371, 544, 760, 779, 1103, 1129, 1321
BtsIMutI CAGTG 2 cut(s) 432, 1064
BveI ACCTGC 1 cut(s) 1849
Cac8I GCNNGC 7 cut(s) 211, 260, 369, 389, 809, 1194, 1277
Cfr13I GGNCC 5 cut(s) 7, 311, 677, 1061, 1090
CseI GACGC 2 cut(s) 208, 389
Csp6I GTAC 4 cut(s) 56, 360, 966, 2069
CviQI GTAC 4 cut(s) 56, 360, 966, 2069
DdeI CTNAG 3 cut(s) 243, 701, 753
DraI TTTAAA 2 cut(s) 942, 1224
EaeI YGGCCR 2 cut(s) 455, 1434
Eam1104I CTCTTC 4 cut(s) 230, 1431, 1573, 1917
EarI CTCTTC 4 cut(s) 230, 1431, 1573, 1917
Eco130I CCWWGG 4 cut(s) 124, 263, 520, 1995
Eco147I AGGCCT 1 cut(s) 391
Eco31I GGTCTC 3 cut(s) 232, 1096, 1428
Eco32I GATATC 1 cut(s) 1045
Eco47I GGWCC 3 cut(s) 311, 677, 1090
Eco57I CTGAAG 3 cut(s) 336, 1688, 2022
Eco81I CCTNAGG 1 cut(s) 243
Eco91I GGTNACC 1 cut(s) 1386
EcoO109I RGGNCCY 1 cut(s) 1090
EcoO65I GGTNACC 1 cut(s) 1386
EcoRI GAATTC 3 cut(s) 621, 1513, 1772
EcoRII CCWGG 5 cut(s) 391, 1093, 1517, 1740, 1762
EcoRV GATATC 1 cut(s) 1045
EcoT14I CCWWGG 4 cut(s) 124, 263, 520, 1995
ErhI CCWWGG 4 cut(s) 124, 263, 520, 1995
FalI AAGNNNNNCTT 2 cut(s) 1144, 1176
FaqI GGGAC 1 cut(s) 1637
FauI CCCGC 1 cut(s) 376
FauNDI CATATG 1 cut(s) 307
FbaI TGATCA 3 cut(s) 532, 1348, 1948
FblI GTMKAC 2 cut(s) 526, 1530
Fnu4HI GCNGC 8 cut(s) 130, 418, 878, 881, 1234, 1250, 1455, 1881
FokI GGATG 8 cut(s) 358, 362, 551, 747, 786, 1110, 1136, 1328
Fsp4HI GCNGC 8 cut(s) 130, 418, 878, 881, 1234, 1250, 1455, 1881
FspBI CTAG 5 cut(s) 159, 357, 1670, 1688, 1940
GluI GCNGC 8 cut(s) 130, 418, 878, 881, 1234, 1250, 1455, 1881
GsaI CCCAGC 1 cut(s) 1808
GsuI CTGGAG 2 cut(s) 878, 2009
HaeIII GGCC 5 cut(s) 9, 391, 457, 1063, 1436
HapII CCGG 4 cut(s) 53, 375, 454, 1171
HgaI GACGC 2 cut(s) 208, 389
Hin1I GRCGYC 1 cut(s) 400
HincII GTYRAC 2 cut(s) 271, 1531
HindII GTYRAC 2 cut(s) 271, 1531
HindIII AAGCTT 1 cut(s) 1490
HinfI GANTC 8 cut(s) 185, 224, 335, 736, 1077, 1109, 1463, 1527
HpaII CCGG 4 cut(s) 53, 375, 454, 1171
HphI GGTGA 3 cut(s) 115, 179, 1420
Hpy166II GTNNAC 5 cut(s) 271, 527, 677, 966, 1531
Hpy188I TCNGA 7 cut(s) 345, 580, 844, 993, 1082, 1771, 2041
Hpy8I GTNNAC 5 cut(s) 271, 527, 677, 966, 1531
Hpy99I CGWCG 1 cut(s) 224
HpyAV CCTTC 7 cut(s) 59, 107, 225, 390, 1081, 1140, 1803
HpyCH4III ACNGT 3 cut(s) 275, 436, 689
HpyF10VI GCNNNNNNNGC 9 cut(s) 129, 210, 397, 423, 563, 889, 1198, 1316, 1903
HpyF3I CTNAG 3 cut(s) 243, 701, 753
Hsp92I GRCGYC 1 cut(s) 400
Kpn2I TCCGGA 1 cut(s) 374
Ksp22I TGATCA 3 cut(s) 532, 1348, 1948
LmnI GCTCC 6 cut(s) 249, 571, 583, 655, 897, 2028
Lsp1109I GCAGC 7 cut(s) 404, 867, 889, 1220, 1261, 1441, 1867
LweI GCATC 7 cut(s) 261, 380, 529, 655, 764, 879, 1306
MaeI CTAG 5 cut(s) 159, 357, 1670, 1688, 1940
MaeIII GTNAC 5 cut(s) 401, 756, 1184, 1386, 2056
MboII GAAGA 9 cut(s) 180, 247, 329, 738, 1418, 1560, 1694, 1904, 1907
MfeI CAATTG 1 cut(s) 1458
MflI RGATCY 3 cut(s) 61, 509, 1665
MlsI TGGCCA 1 cut(s) 1436
MluNI TGGCCA 1 cut(s) 1436
MlyI GAGTC 4 cut(s) 233, 1086, 1472, 1536
MmeI TCCRAC 1 cut(s) 598
Mox20I TGGCCA 1 cut(s) 1436
MroI TCCGGA 1 cut(s) 374
MscI TGGCCA 1 cut(s) 1436
MslI CAYNNNNRTG 2 cut(s) 687, 765
Msp20I TGGCCA 1 cut(s) 1436
MspA1I CMGCKG 1 cut(s) 880
MspCI CTTAAG 1 cut(s) 950
MspI CCGG 4 cut(s) 53, 375, 454, 1171
MspR9I CCNGG 7 cut(s) 393, 454, 1095, 1172, 1519, 1742, 1764
MunI CAATTG 1 cut(s) 1458
Mva1269I GAATGC 5 cut(s) 206, 1000, 1201, 1312, 1648
MvaI CCWGG 5 cut(s) 393, 1095, 1519, 1742, 1764
MvnI CGCG 1 cut(s) 219
MwoI GCNNNNNNNGC 9 cut(s) 129, 210, 397, 423, 563, 889, 1198, 1316, 1903
NciI CCSGG 2 cut(s) 454, 1172
NcoI CCATGG 1 cut(s) 520
NdeI CATATG 1 cut(s) 307
NlaIV GGNNCC 2 cut(s) 1092, 1760
NmeAIII GCCGAG 2 cut(s) 100, 1177
NmuCI GTSAC 1 cut(s) 401
NspI RCATGY 6 cut(s) 815, 1196, 1233, 1826, 1967, 2057
NspV TTCGAA 1 cut(s) 718
PaeI GCATGC 1 cut(s) 1196
PceI AGGCCT 1 cut(s) 391
PciI ACATGT 1 cut(s) 2053
PctI GAATGC 5 cut(s) 206, 1000, 1201, 1312, 1648
PfeI GAWTC 4 cut(s) 185, 335, 736, 1109
PflMI CCANNNNNTGG 2 cut(s) 521, 770
PkrI GCNGC 8 cut(s) 131, 419, 879, 882, 1235, 1251, 1456, 1882
PleI GAGTC 4 cut(s) 232, 1085, 1471, 1535
PpsI GAGTC 4 cut(s) 232, 1085, 1471, 1535
PpuMI RGGWCCY 1 cut(s) 1090
PscI ACATGT 1 cut(s) 2053
PshBI ATTAAT 1 cut(s) 2046
Psp5II RGGWCCY 1 cut(s) 1090
Psp6I CCWGG 5 cut(s) 391, 1093, 1517, 1740, 1762
PspEI GGTNACC 1 cut(s) 1386
PspFI CCCAGC 1 cut(s) 1804
PspGI CCWGG 5 cut(s) 391, 1093, 1517, 1740, 1762
PspN4I GGNNCC 2 cut(s) 1092, 1760
PspPI GGNCC 5 cut(s) 7, 311, 677, 1061, 1090
PspPPI RGGWCCY 1 cut(s) 1090
PsuI RGATCY 3 cut(s) 61, 509, 1665
PvuII CAGCTG 1 cut(s) 880
RsaI GTAC 4 cut(s) 57, 361, 967, 2070
RsaNI GTAC 4 cut(s) 56, 360, 966, 2069
RseI CAYNNNNRTG 2 cut(s) 687, 765
SalI GTCGAC 1 cut(s) 1529
SatI GCNGC 8 cut(s) 130, 418, 878, 881, 1234, 1250, 1455, 1881
Sau96I GGNCC 5 cut(s) 7, 311, 677, 1061, 1090
SchI GAGTC 4 cut(s) 233, 1086, 1472, 1536
ScrFI CCNGG 7 cut(s) 393, 454, 1095, 1172, 1519, 1742, 1764
SfaNI GCATC 7 cut(s) 261, 380, 529, 655, 764, 879, 1306
SfuI TTCGAA 1 cut(s) 718
SinI GGWCC 3 cut(s) 311, 677, 1090
SmiMI CAYNNNNRTG 2 cut(s) 687, 765
SmlI CTYRAG 2 cut(s) 950, 1884
SmoI CTYRAG 2 cut(s) 950, 1884
SphI GCATGC 1 cut(s) 1196
SseBI AGGCCT 1 cut(s) 391
SsiI CCGC 5 cut(s) 117, 129, 217, 369, 442
SspMI CTAG 5 cut(s) 159, 357, 1670, 1688, 1940
StuI AGGCCT 1 cut(s) 391
StyD4I CCNGG 7 cut(s) 391, 452, 1093, 1170, 1517, 1740, 1762
StyI CCWWGG 4 cut(s) 124, 263, 520, 1995
TaaI ACNGT 3 cut(s) 275, 436, 689
TaqI TCGA 5 cut(s) 222, 663, 718, 1304, 1530
TatI WGTACW 3 cut(s) 359, 965, 2068
TauI GCSGC 1 cut(s) 132
TfiI GAWTC 4 cut(s) 185, 335, 736, 1109
TscAI CASTG 2 cut(s) 439, 1071
TseFI GTSAC 1 cut(s) 401
TseI GCWGC 7 cut(s) 417, 877, 880, 1233, 1249, 1454, 1880
Tsp45I GTSAC 1 cut(s) 401
TspDTI ATGAA 6 cut(s) 17, 27, 294, 348, 1021, 1515
TspGWI ACGGA 3 cut(s) 57, 948, 1231
TspRI CASTG 2 cut(s) 439, 1071
Van91I CCANNNNNTGG 2 cut(s) 521, 770
Vha464I CTTAAG 1 cut(s) 950
VpaK11BI GGWCC 3 cut(s) 311, 677, 1090
VspI ATTAAT 1 cut(s) 2046
XapI RAATTY 6 cut(s) 621, 1393, 1513, 1559, 1615, 1772
XceI RCATGY 6 cut(s) 815, 1196, 1233, 1826, 1967, 2057
XcmI CCANNNNNNNNNTGG 2 cut(s) 932, 1055
XmiI GTMKAC 2 cut(s) 526, 1530
XspI CTAG 5 cut(s) 159, 357, 1670, 1688, 1940
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.