Rh6AG515200

SWIM zinc finger family protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6A
OG0016270
Physical Location & Seq
Reverse (-)
68510724 .. 68518677
7954 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6AG515200.1

Sequence Viewer

Length: 2073 bp
ATGGCTAGAATGGAGGACATTCTTAATCTTCCGGTGCAAGATCCTGCGTGTCCCGACTTTTCTGCTGCTCATATCAAATGGGTAAAAGTAGAAGGCGGTCGCCAGGGTGGAGATGATATTGCCCTCATCCCATTTGCTCGAGTGGATGATTTTGTGAAAGGAGAATCTTCAAATGCTGATTGCCCTGCCAGCTTCCGCATTGAGTCCAAAAGGAAGAGAGCTGAAGGCAGCGTAAGCAAGCCGAGGGTCGATGGCTATCTTGAATATACACTATACTGGTGTTCTTATGGCCCTGAAGACTACAGAGATAGTGAATCCGGTATGGTGGATGGTTCTAGTATGATGAAGCCTGCATCAGGAAAGGGGAGCAGGCCTGGGCGGCGTCACATGATGAGAGGCTGCCTCTGCCATTTTACTGTAAAACGCTTATATACACGGCCACTCATTGCTCTTATTATCTATAACCAGAGAACGCATGTAGATAAATCAGGAGCCCCTTGTCATGGCATACTTGATCGGGATTCTATGGGAACAAGAGCTATGTATGCTCCACGAATTTCGGAGGAGCAACGCCTGAAAGTGATGTCTATGCTTTATGCTGGAATACCTTTGGACAATATAATTCAGCATCACATGGAGGTAGTCCAGGAGCATGGAGGACCCCTTAACCGTGATGATTTTCTGAGTCGTAGTGATGTTCGTAACATGGAAAGGCTGATTCGTAATTCTTCTCATGAGCTACATGCAGATGATGGATGCAGTGTAAAGATTTGGGTTCAACGCCATCGTAAGCATGTTTTCTACTTTGAAGACAGCTCTAATTCAGAACCATTTGTCTTAGGGATACAGACAGATTGGCAGCTGCAGCAGATGCTCCAATATGGACATAATAGTTATGTAGCTTTCCATTCAAGATTTGGCTTCAAGAAATTGAAGTATCCCTTGTCGACATTACTTGTTTTCGACCCATCCCATAATGCAATACCAGTTGCTTGGATCATTACATCTTCTCTCGGCAGTCAAGATATCCACAAGTGGATTGGGTTACTGGCTGAAAGAATTCGAACCAAGGATCCAAGATGGAGACTTGATGCCTTTTTTGTAGATGATCCTTCCGTTGAGATTTCTATAATAAGAGAGGCTTTTCAATGCCGGGTTTTATTATGCATCTGGCATGTTCGGCGTGCTTGGATAAGAAGCCTTTTAAAGACATGCAGAAACCTTGATGTGCAGCGAGAGATGTTTAAGTACTTAGGTTGGCTGTTGTATTGTACAAGAAGTGGGCCAAATGCTATGGATGCAGTTGAAGAGTTTCTGCAAGTATTTGTTGATCAATGTGCTTTTATGGATTACTTTAAGAGGCGATGGTTACCAAATATAGAGTTGTGGGTCAATGGTATAAGGTCTCTTCCTGTGGCCAGTCCAGAGCCGAATGCTGCAGTTGAGTCCTATCATTTAAGGTTGAAATCCAAGCTTTTCAATGAGCAATATTCTAGCTTCTGGTCAAGAGTTGACTGGTTAATCCACACACTTACAACTGAATTCCAATCATCCTATTGGTTGGACCAATATAGCGTAGAGACTGGGTGTTTTGAAAATCTGAGGGACAGGTCTTTCTTAACCAATTCTTGGTATCAGGCTTTGCAGATCCTAGATGTTGATGTCATAATTGATGAGCAAAATCTACAGTATGCAAAAGTCATCTCACAATCAGACAGAAGCGTGGCGTACACGATCTGGAACCCTGGTTCAGAATTCTCTTTGTGTGATTGCCCTTCGTCGATGCTGGGGAATCTCTGTAAGCATATCATCAAGGTGGCAATCTTGTGTAAAAGTCGGCAGGTTGCGAGACCTTTATTGGCTGCCCAAGTTTATAGGCAGGCTTTGCTTACCCTTCTACAAAATCCCCCAGATGATCCTGTAGTTCTTGATCATGCTATTTTACATGCAACTCGCTTGCAACAGGACATCAAAGGCTTGGAAGATTTATCCAATAGTGGGTTGCTCCAGTCGTTACCTTCAGAGATTAACTCTCATGTAGCAGACAGTATAGTTTTCCCTCATCTCCCTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
MULE SWIM

Protein Analysis

690

Amino Acids

79.32

Weight (kDa)

7.09

Isoelectric Point (pI)

52.61

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0016270)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g30231 FvH4_2g30231
malus_domestica MD08G1135300.v1.1
prunus_persica Prupe.1G465300_v2.0.a1
pyrus_communis pycom08g11430
rosa_chinensis RchiOBHm_Chr6g0312571 RchiOBHm_Chr6g0312641
rosa_laevigata RLG00000010308
rosa_multiflora Rmu_sc0002859.1_g000006 Rmu_ssc0000412.1_g000004
rosa_roxburghii Rroxscaffold_7G00156620
rosa_rugosa Rorug06G0397900
rosa_samantha Rh6AG515200 Rh6CG530100
rosa_wichuraiana Rw6G044770

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1831
AccB7I CCANNNNNTGG 1 cut(s) 1629
AccI GTMKAC 1 cut(s) 947
AciI CCGC 3 cut(s) 96, 196, 379
AclWI GGATC 7 cut(s) 35, 1004, 1067, 1080, 1103, 1642, 1910
AcoI YGGCCR 2 cut(s) 437, 1416
AcsI RAATTY 4 cut(s) 555, 1059, 1541, 1754
AcuI CTGAAG 3 cut(s) 243, 315, 2004
AcyI GRCGYC 1 cut(s) 382
AfaI GTAC 3 cut(s) 1250, 1273, 1730
AfiI CCNNNNNNNGG 4 cut(s) 356, 503, 1629, 1998
AjnI CCWGG 4 cut(s) 102, 373, 645, 1744
AloI GAACNNNNNNTCC 4 cut(s) 1057, 1089, 1732, 1764
AluBI AGCT 9 cut(s) 192, 221, 539, 739, 816, 862, 902, 1474, 1497
AluI AGCT 9 cut(s) 192, 221, 539, 739, 816, 862, 902, 1474, 1497
Alw26I GTCTC 4 cut(s) 1078, 1410, 1574, 1843
AlwI GGATC 7 cut(s) 35, 1004, 1067, 1080, 1103, 1642, 1910
Ama87I CYCGRG 1 cut(s) 138
AoxI GGCC 5 cut(s) 289, 371, 437, 1283, 1416
ApeKI GCWGC 9 cut(s) 65, 228, 399, 859, 862, 865, 1231, 1436, 1862
ApoI RAATTY 4 cut(s) 555, 1059, 1541, 1754
Asp700I GAANNNNTTC 2 cut(s) 1059, 1311
AspS9I GGNCC 4 cut(s) 290, 659, 1283, 1564
AsuC2I CCSGG 1 cut(s) 1154
AsuII TTCGAA 1 cut(s) 1063
AvaI CYCGRG 1 cut(s) 138
AvaII GGWCC 2 cut(s) 659, 1564
BalI TGGCCA 1 cut(s) 1418
BamHI GGATCC 1 cut(s) 1072
BanII GRGCYC 1 cut(s) 496
BbsI GAAGAC 2 cut(s) 303, 816
BbvI GCAGC 9 cut(s) 52, 240, 386, 849, 871, 877, 1243, 1423, 1849
BccI CCATC 7 cut(s) 245, 323, 746, 792, 976, 1074, 1359
BceAI ACGGC 1 cut(s) 452
BcgI CGANNNNNNTGC 2 cut(s) 44, 78
BciT130I CCWGG 4 cut(s) 104, 375, 647, 1746
BciVI GTATCC 2 cut(s) 837, 948
BclI TGATCA 2 cut(s) 1330, 1930
BcnI CCSGG 1 cut(s) 1154
BcoDI GTCTC 4 cut(s) 1078, 1410, 1574, 1843
BfaI CTAG 4 cut(s) 6, 336, 1494, 1652
BfmI CTRYAG 5 cut(s) 301, 863, 1437, 1685, 1920
BfuAI ACCTGC 1 cut(s) 1831
BfuI GTATCC 2 cut(s) 837, 948
BglI GCCNNNNNGGC 1 cut(s) 379
BmcAI AGTACT 1 cut(s) 1250
Bme1390I CCNGG 5 cut(s) 104, 375, 647, 1154, 1746
Bme18I GGWCC 2 cut(s) 659, 1564
BmeT110I CYCGRG 1 cut(s) 138
BmgT120I GGNCC 4 cut(s) 290, 659, 1283, 1564
BmiI GGNNCC 4 cut(s) 493, 661, 1074, 1742
BmrFI CCNGG 5 cut(s) 104, 375, 647, 1154, 1746
BmrI ACTGGG 1 cut(s) 1593
BmsI GCATC 8 cut(s) 362, 637, 746, 861, 1081, 1176, 1288, 1773
BmuI ACTGGG 1 cut(s) 1593
BpiI GAAGAC 2 cut(s) 303, 816
BplI GAGNNNNNCTC 4 cut(s) 387, 419, 2015, 2047
BpmI CTGGAG 1 cut(s) 1991
Bpu14I TTCGAA 1 cut(s) 1063
BpuMI CCSGG 1 cut(s) 1154
BsaBI GATNNNNATC 1 cut(s) 255
BsaHI GRCGYC 1 cut(s) 382
BsaI GGTCTC 2 cut(s) 1410, 1843
BsaJI CCNNGG 5 cut(s) 103, 242, 374, 1068, 1744
BsaWI WCCGGW 2 cut(s) 31, 317
Bsc4I CCNNNNNNNGG 4 cut(s) 356, 503, 1629, 1998
Bse1I ACTGG 7 cut(s) 281, 986, 1053, 1419, 1520, 1588, 2008
Bse3DI GCAATG 1 cut(s) 444
Bse8I GATNNNNATC 1 cut(s) 255
BseBI CCWGG 4 cut(s) 104, 375, 647, 1746
BseDI CCNNGG 5 cut(s) 103, 242, 374, 1068, 1744
BseGI GGATG 7 cut(s) 126, 151, 334, 761, 968, 1303, 1550
BseJI GATNNNNATC 1 cut(s) 255
BseLI CCNNNNNNNGG 4 cut(s) 356, 503, 1629, 1998
BseMI GCAATG 1 cut(s) 444
BseMII CTCAG 2 cut(s) 674, 1592
BseNI ACTGG 7 cut(s) 281, 986, 1053, 1419, 1520, 1588, 2008
BseRI GAGGAG 1 cut(s) 578
BseXI GCAGC 9 cut(s) 52, 240, 386, 849, 871, 877, 1243, 1423, 1849
BseYI CCCAGC 1 cut(s) 1786
BsgI GTGCAG 1 cut(s) 1250
Bsh1285I CGRYCG 1 cut(s) 100
BshFI GGCC 5 cut(s) 291, 373, 439, 1285, 1418
BsiEI CGRYCG 1 cut(s) 100
BsiHKCI CYCGRG 1 cut(s) 138
BsiSI CCGG 3 cut(s) 32, 318, 1153
BslFI GGGAC 2 cut(s) 36, 1619
BslI CCNNNNNNNGG 4 cut(s) 356, 503, 1629, 1998
BsmAI GTCTC 4 cut(s) 1078, 1410, 1574, 1843
BsmFI GGGAC 2 cut(s) 36, 1619
BsmI GAATGC 1 cut(s) 1438
BsnI GGCC 5 cut(s) 291, 373, 439, 1285, 1418
Bso31I GGTCTC 2 cut(s) 1410, 1843
BsoBI CYCGRG 1 cut(s) 138
Bsp119I TTCGAA 1 cut(s) 1063
Bsp1286I GDGCHC 1 cut(s) 496
Bsp1407I TGTACA 1 cut(s) 1271
BspACI CCGC 3 cut(s) 96, 196, 379
BspANI GGCC 5 cut(s) 291, 373, 439, 1285, 1418
BspCNI CTCAG 2 cut(s) 675, 1593
BspHI TCATGA 1 cut(s) 733
BspLI GGNNCC 4 cut(s) 493, 661, 1074, 1742
BspMAI CTGCAG 2 cut(s) 867, 1441
BspMI ACCTGC 1 cut(s) 1831
BspPI GGATC 7 cut(s) 35, 1004, 1067, 1080, 1103, 1642, 1910
BspT104I TTCGAA 1 cut(s) 1063
BspTNI GGTCTC 2 cut(s) 1410, 1843
BsrDI GCAATG 1 cut(s) 444
BsrGI TGTACA 1 cut(s) 1271
BsrI ACTGG 7 cut(s) 281, 986, 1053, 1419, 1520, 1588, 2008
BssECI CCNNGG 5 cut(s) 103, 242, 374, 1068, 1744
BssNI GRCGYC 1 cut(s) 382
BssT1I CCWWGG 1 cut(s) 1068
Bst2UI CCWGG 4 cut(s) 104, 375, 647, 1746
Bst4CI ACNGT 4 cut(s) 418, 671, 1689, 2048
Bst6I CTCTTC 3 cut(s) 209, 1302, 1413
BstACI GRCGYC 1 cut(s) 382
BstAPI GCANNNNNTGC 2 cut(s) 871, 1885
BstAUI TGTACA 1 cut(s) 1271
BstBI TTCGAA 1 cut(s) 1063
BstC8I GCNNGC 7 cut(s) 190, 239, 351, 371, 1185, 1881, 1958
BstDEI CTNAG 4 cut(s) 683, 838, 1252, 1601
BstEII GGTNACC 1 cut(s) 1368
BstENI CCTNNNNNAGG 1 cut(s) 354
BstF5I GGATG 7 cut(s) 126, 151, 334, 761, 968, 1303, 1550
BstMAI GTCTC 4 cut(s) 1078, 1410, 1574, 1843
BstMCI CGRYCG 1 cut(s) 100
BstNI CCWGG 4 cut(s) 104, 375, 647, 1746
BstNSI RCATGY 6 cut(s) 479, 746, 797, 1178, 1215, 1949
BstPI GGTNACC 1 cut(s) 1368
BstSCI CCNGG 5 cut(s) 102, 373, 645, 1152, 1744
BstSFI CTRYAG 5 cut(s) 301, 863, 1437, 1685, 1920
BstV1I GCAGC 9 cut(s) 52, 240, 386, 849, 871, 877, 1243, 1423, 1849
BstV2I GAAGAC 2 cut(s) 303, 816
BstX2I RGATCY 3 cut(s) 40, 1072, 1647
BstXI CCANNNNNNTGG 2 cut(s) 653, 993
BstYI RGATCY 3 cut(s) 40, 1072, 1647
BsuI GTATCC 2 cut(s) 837, 948
BsuRI GGCC 5 cut(s) 291, 373, 439, 1285, 1418
BtgZI GCGATG 1 cut(s) 1378
BtsCI GGATG 7 cut(s) 126, 151, 334, 761, 968, 1303, 1550
BtsI GCAGTG 1 cut(s) 766
BtsIMutI CAGTG 1 cut(s) 766
BveI ACCTGC 1 cut(s) 1831
Cac8I GCNNGC 7 cut(s) 190, 239, 351, 371, 1185, 1881, 1958
CciI TCATGA 1 cut(s) 733
Cfr13I GGNCC 4 cut(s) 290, 659, 1283, 1564
CseI GACGC 1 cut(s) 371
Csp6I GTAC 3 cut(s) 1249, 1272, 1729
CviQI GTAC 3 cut(s) 1249, 1272, 1729
DdeI CTNAG 4 cut(s) 683, 838, 1252, 1601
DraI TTTAAA 1 cut(s) 1206
EaeI YGGCCR 2 cut(s) 437, 1416
Eam1104I CTCTTC 3 cut(s) 209, 1302, 1413
EarI CTCTTC 3 cut(s) 209, 1302, 1413
Eco130I CCWWGG 1 cut(s) 1068
Eco147I AGGCCT 1 cut(s) 373
Eco24I GRGCYC 1 cut(s) 496
Eco31I GGTCTC 2 cut(s) 1410, 1843
Eco32I GATATC 1 cut(s) 1027
Eco47I GGWCC 2 cut(s) 659, 1564
Eco57I CTGAAG 3 cut(s) 243, 315, 2004
Eco88I CYCGRG 1 cut(s) 138
Eco91I GGTNACC 1 cut(s) 1368
EcoNI CCTNNNNNAGG 1 cut(s) 354
EcoO109I RGGNCCY 1 cut(s) 659
EcoO65I GGTNACC 1 cut(s) 1368
EcoRI GAATTC 3 cut(s) 1059, 1541, 1754
EcoRII CCWGG 4 cut(s) 102, 373, 645, 1744
EcoRV GATATC 1 cut(s) 1027
EcoT14I CCWWGG 1 cut(s) 1068
EcoT22I ATGCAT 1 cut(s) 1169
EcoT38I GRGCYC 1 cut(s) 496
ErhI CCWWGG 1 cut(s) 1068
FalI AAGNNNNNCTT 4 cut(s) 926, 958, 1126, 1158
FaqI GGGAC 2 cut(s) 36, 1619
FbaI TGATCA 2 cut(s) 1330, 1930
FblI GTMKAC 1 cut(s) 947
FokI GGATG 7 cut(s) 113, 158, 341, 768, 955, 1310, 1537
FriOI GRGCYC 1 cut(s) 496
FspBI CTAG 4 cut(s) 6, 336, 1494, 1652
GsaI CCCAGC 1 cut(s) 1790
GsuI CTGGAG 1 cut(s) 1991
HaeIII GGCC 5 cut(s) 291, 373, 439, 1285, 1418
HapII CCGG 3 cut(s) 32, 318, 1153
HgaI GACGC 1 cut(s) 371
Hin1I GRCGYC 1 cut(s) 382
HincII GTYRAC 2 cut(s) 948, 1513
HindII GTYRAC 2 cut(s) 948, 1513
HindIII AAGCTT 1 cut(s) 1472
HinfI GANTC 8 cut(s) 164, 203, 314, 521, 685, 718, 1445, 1792
HpaII CCGG 3 cut(s) 32, 318, 1153
Hpy166II GTNNAC 3 cut(s) 948, 1513, 1731
Hpy188I TCNGA 7 cut(s) 562, 684, 826, 1602, 1714, 1753, 2023
Hpy8I GTNNAC 3 cut(s) 948, 1513, 1731
Hpy99I CGWCG 1 cut(s) 1783
HpyAV CCTTC 6 cut(s) 86, 218, 1122, 1785, 1904, 2028
HpyCH4III ACNGT 4 cut(s) 418, 671, 1689, 2048
HpyF3I CTNAG 4 cut(s) 683, 838, 1252, 1601
Hsp92I GRCGYC 1 cut(s) 382
Ksp22I TGATCA 2 cut(s) 1330, 1930
LmnI GCTCC 7 cut(s) 366, 491, 553, 565, 649, 879, 2010
Lsp1109I GCAGC 9 cut(s) 52, 240, 386, 849, 871, 877, 1243, 1423, 1849
LweI GCATC 8 cut(s) 362, 637, 746, 861, 1081, 1176, 1288, 1773
MaeI CTAG 4 cut(s) 6, 336, 1494, 1652
MaeIII GTNAC 5 cut(s) 383, 701, 1044, 1368, 2013
MflI RGATCY 3 cut(s) 40, 1072, 1647
MhlI GDGCHC 1 cut(s) 496
MlsI TGGCCA 1 cut(s) 1418
MluNI TGGCCA 1 cut(s) 1418
MlyI GAGTC 3 cut(s) 212, 694, 1454
MmeI TCCRAC 1 cut(s) 1542
Mox20I TGGCCA 1 cut(s) 1418
Mph1103I ATGCAT 1 cut(s) 1169
MroXI GAANNNNTTC 2 cut(s) 1059, 1311
MscI TGGCCA 1 cut(s) 1418
MseI TTAA 9 cut(s) 24, 666, 1205, 1245, 1356, 1457, 1520, 1619, 2028
MslI CAYNNNNRTG 2 cut(s) 747, 1814
Msp20I TGGCCA 1 cut(s) 1418
MspA1I CMGCKG 1 cut(s) 862
MspI CCGG 3 cut(s) 32, 318, 1153
MspR9I CCNGG 5 cut(s) 104, 375, 647, 1154, 1746
Mva1269I GAATGC 1 cut(s) 1438
MvaI CCWGG 4 cut(s) 104, 375, 647, 1746
NciI CCSGG 1 cut(s) 1154
NlaIV GGNNCC 4 cut(s) 493, 661, 1074, 1742
NmeAIII GCCGAG 2 cut(s) 267, 993
NmuCI GTSAC 1 cut(s) 383
NsiI ATGCAT 1 cut(s) 1169
NspI RCATGY 6 cut(s) 479, 746, 797, 1178, 1215, 1949
NspV TTCGAA 1 cut(s) 1063
PaeR7I CTCGAG 1 cut(s) 138
PagI TCATGA 1 cut(s) 733
PceI AGGCCT 1 cut(s) 373
PctI GAATGC 1 cut(s) 1438
PdmI GAANNNNTTC 2 cut(s) 1059, 1311
PfeI GAWTC 5 cut(s) 164, 314, 521, 718, 1792
PflMI CCANNNNNTGG 1 cut(s) 1629
PfoI TCCNGGA 1 cut(s) 645
PleI GAGTC 3 cut(s) 211, 693, 1453
PpsI GAGTC 3 cut(s) 211, 693, 1453
PpuMI RGGWCCY 1 cut(s) 659
Psp5II RGGWCCY 1 cut(s) 659
Psp6I CCWGG 4 cut(s) 102, 373, 645, 1744
PspEI GGTNACC 1 cut(s) 1368
PspFI CCCAGC 1 cut(s) 1786
PspGI CCWGG 4 cut(s) 102, 373, 645, 1744
PspN4I GGNNCC 4 cut(s) 493, 661, 1074, 1742
PspPI GGNCC 4 cut(s) 290, 659, 1283, 1564
PspPPI RGGWCCY 1 cut(s) 659
PspXI VCTCGAGB 1 cut(s) 138
PstI CTGCAG 2 cut(s) 867, 1441
PsuI RGATCY 3 cut(s) 40, 1072, 1647
PvuII CAGCTG 1 cut(s) 862
RsaI GTAC 3 cut(s) 1250, 1273, 1730
RsaNI GTAC 3 cut(s) 1249, 1272, 1729
RseI CAYNNNNRTG 2 cut(s) 747, 1814
SalI GTCGAC 1 cut(s) 946
SaqAI TTAA 9 cut(s) 24, 666, 1205, 1245, 1356, 1457, 1520, 1619, 2028
Sau96I GGNCC 4 cut(s) 290, 659, 1283, 1564
ScaI AGTACT 1 cut(s) 1250
SchI GAGTC 3 cut(s) 212, 694, 1454
ScrFI CCNGG 5 cut(s) 104, 375, 647, 1154, 1746
SduI GDGCHC 1 cut(s) 496
SfaNI GCATC 8 cut(s) 362, 637, 746, 861, 1081, 1176, 1288, 1773
SfcI CTRYAG 5 cut(s) 301, 863, 1437, 1685, 1920
Sfr274I CTCGAG 1 cut(s) 138
SfuI TTCGAA 1 cut(s) 1063
SinI GGWCC 2 cut(s) 659, 1564
SlaI CTCGAG 1 cut(s) 138
SmiMI CAYNNNNRTG 2 cut(s) 747, 1814
SmlI CTYRAG 1 cut(s) 138
SmoI CTYRAG 1 cut(s) 138
SseBI AGGCCT 1 cut(s) 373
SsiI CCGC 3 cut(s) 96, 196, 379
SspI AATATT 1 cut(s) 1490
SspMI CTAG 4 cut(s) 6, 336, 1494, 1652
StuI AGGCCT 1 cut(s) 373
StyD4I CCNGG 5 cut(s) 102, 373, 645, 1152, 1744
StyI CCWWGG 1 cut(s) 1068
TaaI ACNGT 4 cut(s) 418, 671, 1689, 2048
TaqI TCGA 6 cut(s) 139, 249, 947, 963, 1063, 1781
TatI WGTACW 2 cut(s) 1248, 1271
TauI GCSGC 1 cut(s) 382
TfiI GAWTC 5 cut(s) 164, 314, 521, 718, 1792
Tru1I TTAA 9 cut(s) 24, 666, 1205, 1245, 1356, 1457, 1520, 1619, 2028
Tru9I TTAA 9 cut(s) 24, 666, 1205, 1245, 1356, 1457, 1520, 1619, 2028
TscAI CASTG 1 cut(s) 766
TseFI GTSAC 1 cut(s) 383
TseI GCWGC 9 cut(s) 65, 228, 399, 859, 862, 865, 1231, 1436, 1862
Tsp45I GTSAC 1 cut(s) 383
TspDTI ATGAA 1 cut(s) 359
TspGWI ACGGA 1 cut(s) 1105
TspRI CASTG 1 cut(s) 766
Van91I CCANNNNNTGG 1 cut(s) 1629
VpaK11BI GGWCC 2 cut(s) 659, 1564
XagI CCTNNNNNAGG 1 cut(s) 354
XapI RAATTY 4 cut(s) 555, 1059, 1541, 1754
XceI RCATGY 6 cut(s) 479, 746, 797, 1178, 1215, 1949
XcmI CCANNNNNNNNNTGG 2 cut(s) 914, 1037
XhoI CTCGAG 1 cut(s) 138
XmiI GTMKAC 1 cut(s) 947
XmnI GAANNNNTTC 2 cut(s) 1059, 1311
XspI CTAG 4 cut(s) 6, 336, 1494, 1652
ZrmI AGTACT 1 cut(s) 1250
Zsp2I ATGCAT 1 cut(s) 1169
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.