MD08G1150700.v1.1

Clathrin assembly protein

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr08
Physical Location & Seq
Reverse (-)
15349813 .. 15352407
2595 bp
Loading structure...
UTR
Exon/CDS
Intron
MD08G1150700.v1.1.491

Sequence Viewer

Length: 1983 bp
ATGGCGCCGAGCACGATCCGGAAAGCAATCGGAGCCGTCAAGGACCAGACGAGCATCGGCATCGCCAAGGTCGCCAGCAATCTGGCCCCGGACCTCGAGGTCGCTATCGTCAAAGCGACGTCGCACGAGGATGATCCGGCGAGCGAGAAGCACGTCCGTGAGATTCTGACGCTGACGTCATCGTCCCGGGGCTACGTCAACGCTTGCGTGTCGGCGTTGTCGAAGCGTCTGGGGAAGACGCGCGACTGGATCGTGGCGCTCAAGGCGCTGATGCTGGTCCACCGTCTCCTGAACGACGGCGACCCGGTGTTTGGGGACGAGATCGTGTACGCGACCCGAAGGGGTACCCGCCTCCTGAATCTATCGGATTTCAGGGACGAGGCGCACTCGAGCTCGTGGGACCACTCCGCCTTTGTGAGGACTTATGCTCTGTACTTGGATCAGAGGCTTGAGCTGATGCTGTTTGAGAGAAAGAGCAGCGGAGGAGGCAGCGGAACTGGTCTTGGTGCTGAAGATCGGCAGGGCTCTGGCGGCTTCAACGGCGGGTCTTCGAATTTCAGGTCTCCGCCGCCGAGGAATTACGAGTATGAGTACGGAGGAGAGCGAGATCGAGATTATGAATATGGAGGAGGGATGAGGAGGTCCAGGTCGTACGGCGATATGAATGACTCGGTGAGTCGAAACGGGCGAGATGAGAAGAGAATTGTGAGTGTGACCCCATTGAGGGATATGAAGCCGGAGCGGATTTTCGCGAAAATGGGTCATCTGCAGAGGCTGTTGGATCGGTTCTTGGCGACCCGACCCACCGGATTGGCTAAGAACAGTCGGTTGGTTCTGGTGGCTGTGTACCCGTTGGTGAGGGAGAGCTTTCAGCTGTATGCTGATATTTGTGAGGTATTGGCGGTTTTACTTGATAAGTTTTTCGATATGGAGTATCCGGATTGCGTTAAGGCTTTCGATGCTTATGTGAGTGCGGCGAAGCAGATTGATGAGCTGGTTGGGTTTTATGGGTGGTGTAAGGATTCCGGTTTGGCTCGGTCGTCGGAGTATCCGGAGGTGCAGAGGATTGGGAGCAAGTTGCTGGAAACATTGGAGGAGTTTGTGAGGGACAGGTCCAAGGCAACCAAGAGTCCCGAGAGGAAGGTGGAGACTGCTCCTGTGGCTCCAGTGGAGGAGCCCCAACCCGATATGAATGAGATTAAAGCGCTGCCTGCGCCAGAGAGTTTCACTCCCCCCCCACCTCCTGAGGTTGTGGCGAAGGCTGAGGTGAAGCAGGAAGTGGTAGGGGATTTGGTGGATTTGAGGGATAATGGAGTTTCAGCTGATGCACAGGGGAATCAGTTGGCTTTGGCTTTGTTTGCCGGTCCTGGTGGTGGTGGAAGTGCTAATGGATCGTGGGAAGCTTTCCCATCAGACGGGCAGCCCCAAGTCACCTCGGCTTGGCAGACTCCAGCTGCAGAGCCGGGAAAGGCTGATTGGGAACTGGCATTAGTGGAGACAGCGAGTAATTTATCGAGGCAGAAGCAAAATCTTGGTGGTGGGATGGATCCCTTGTTGTTGGATGGCATGTATGATCAGGGCATTGTGAGGCAGCATGTGAGTACTGCCCAATTGACTGGTGGTAGTGCAAGTAGTGTAGCATTGCCCGGGCCGGGCAAGAGCGCAACGCAGGTGTTAGCTCTTCCCGCTCCAGACGGGACAGTCCAGGCGGTGAATCAGGATCCCTTTGCCGCATCATTAACCGTTCCACCACCTTCCTATGTGCAAATGGCGGATCTGGAGAAGAAGCAGCACTTGCTTACGCAGGAGCAGCAGCTGTGGAACCAATATGCCAAGGAAGGAATGCAAGGCCAAGGTAGCTTGCAGAAAATGAGCAGTGCCGGGTACTACGGAGCAGCTCCTATGGCAATGCAACCCTATGGAATGCCTCCGGTGAACGGAATGGGGATGCCGCCACCGGCTGGCTACTACGCTCCTTACTGA

Protein Analysis

661

Amino Acids

71.59

Weight (kDa)

5.48

Isoelectric Point (pI)

46.57

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ANTH PF07651 31 - 153 1.4e-39 ANTH domain
ENTH PF01417 31 - 144 3.6e-06 ENTH domain
ANTH PF07651 214 - 370 1.1e-34 ANTH domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1660
AasI GACNNNNNNGTC 4 cut(s) 98, 175, 181, 1700
AatII GACGTC 2 cut(s) 122, 179
AbsI CCTCGAGG 1 cut(s) 95
Acc36I ACCTGC 1 cut(s) 1660
Acc65I GGTACC 1 cut(s) 344
AccB1I GGYRCC 2 cut(s) 4, 344
AccB7I CCANNNNNTGG 1 cut(s) 1961
AccBSI CCGCTC 2 cut(s) 742, 1688
AccII CGCG 4 cut(s) 241, 243, 332, 752
AccIII TCCGGA 3 cut(s) 18, 937, 1051
AcsI RAATTY 1 cut(s) 553
AcuI CTGAAG 1 cut(s) 531
AcyI GRCGYC 3 cut(s) 5, 119, 176
AfaI GTAC 8 cut(s) 329, 346, 434, 593, 653, 848, 1603, 1886
AfeI AGCGCT 1 cut(s) 1206
AgsI TTSAA 1 cut(s) 538
AjiI CACGTC 1 cut(s) 154
AjnI CCWGG 3 cut(s) 644, 1366, 1704
AjuI GAANNNNNNNTTGG 4 cut(s) 812, 844, 1459, 1491
AleI CACNNNNGTG 1 cut(s) 156
Alw21I GWGCWC 2 cut(s) 14, 395
Alw26I GTCTC 4 cut(s) 290, 567, 1142, 1490
AlwNI CAGNNNCTG 2 cut(s) 775, 1816
Ama87I CYCGRG 5 cut(s) 95, 186, 388, 1133, 1646
Aor13HI TCCGGA 3 cut(s) 18, 937, 1051
Aor51HI AGCGCT 1 cut(s) 1206
AoxI GGCC 3 cut(s) 84, 1649, 1849
ApoI RAATTY 1 cut(s) 553
ArsI GACNNNNNNTTYG 4 cut(s) 293, 325, 545, 577
Asp718I GGTACC 1 cut(s) 344
AspLEI GCGC 8 cut(s) 7, 243, 259, 268, 385, 1207, 1216, 1664
AspS9I GGNCC 9 cut(s) 43, 85, 91, 277, 400, 642, 1113, 1364, 1649
AsuC2I CCSGG 9 cut(s) 89, 187, 188, 305, 1464, 1647, 1648, 1653, 1882
AsuHPI GGTGA 6 cut(s) 685, 868, 1279, 1423, 1723, 1945
AsuII TTCGAA 1 cut(s) 551
AvaI CYCGRG 5 cut(s) 95, 186, 388, 1133, 1646
AvaII GGWCC 7 cut(s) 43, 91, 277, 400, 642, 1113, 1364
AxyI CCTNAGG 1 cut(s) 1245
BamHI GGATCC 2 cut(s) 1546, 1720
BanI GGYRCC 2 cut(s) 4, 344
BanII GRGCYC 3 cut(s) 395, 527, 1179
BauI CACGAG 2 cut(s) 125, 394
BbsI GAAGAC 2 cut(s) 242, 540
Bbv12I GWGCWC 2 cut(s) 14, 395
BbvCI CCTCAGC 1 cut(s) 1263
BccI CCATC 3 cut(s) 1417, 1537, 1556
BceAI ACGGC 4 cut(s) 20, 313, 556, 670
BcgI CGANNNNNNTGC 2 cut(s) 43, 77
BciT130I CCWGG 3 cut(s) 646, 1368, 1706
BciVI GTATCC 2 cut(s) 945, 1059
BclI TGATCA 1 cut(s) 1573
BcnI CCSGG 9 cut(s) 89, 187, 188, 305, 1464, 1647, 1648, 1653, 1882
BcoDI GTCTC 4 cut(s) 290, 567, 1142, 1490
BfmI CTRYAG 2 cut(s) 767, 1455
BfoI RGCGCY 4 cut(s) 8, 260, 269, 1208
BfuAI ACCTGC 1 cut(s) 1660
BfuI GTATCC 2 cut(s) 945, 1059
BmcAI AGTACT 1 cut(s) 1603
Bme18I GGWCC 7 cut(s) 43, 91, 277, 400, 642, 1113, 1364
BmeT110I CYCGRG 5 cut(s) 95, 186, 388, 1133, 1646
BmgBI CACGTC 1 cut(s) 154
BmgT120I GGNCC 9 cut(s) 43, 85, 91, 277, 400, 642, 1113, 1364, 1649
BmsI GCATC 8 cut(s) 63, 69, 261, 447, 949, 1315, 1742, 1938
BpiI GAAGAC 2 cut(s) 242, 540
BplI GAGNNNNNCTC 4 cut(s) 371, 403, 1213, 1245
BpmI CTGGAG 4 cut(s) 1149, 1434, 1674, 1799
Bpu10I CCTNAGC 1 cut(s) 1263
Bpu14I TTCGAA 1 cut(s) 551
BpuEI CTTGAG 2 cut(s) 245, 470
BpuMI CCSGG 9 cut(s) 89, 187, 188, 305, 1464, 1647, 1648, 1653, 1882
BsaHI GRCGYC 3 cut(s) 5, 119, 176
BsaI GGTCTC 1 cut(s) 567
BsaWI WCCGGW 6 cut(s) 18, 806, 937, 1025, 1051, 1930
Bse118I RCCGGY 2 cut(s) 1361, 1957
Bse1I ACTGG 5 cut(s) 251, 502, 1166, 1488, 1621
Bse21I CCTNAGG 1 cut(s) 1245
Bse3DI GCAATG 2 cut(s) 1640, 1914
BseAI TCCGGA 3 cut(s) 18, 937, 1051
BseBI CCWGG 3 cut(s) 646, 1368, 1706
BseGI GGATG 5 cut(s) 136, 639, 1548, 1567, 1953
BseMI GCAATG 2 cut(s) 1640, 1914
BseMII CTCAG 2 cut(s) 1236, 1254
BseNI ACTGG 5 cut(s) 251, 502, 1166, 1488, 1621
BseRI GAGGAG 6 cut(s) 498, 612, 642, 652, 1109, 1187
BsgI GTGCAG 1 cut(s) 1079
Bsh1236I CGCG 4 cut(s) 241, 243, 332, 752
Bsh1285I CGRYCG 1 cut(s) 1040
BshFI GGCC 3 cut(s) 86, 1651, 1851
BshNI GGYRCC 2 cut(s) 4, 344
BsiEI CGRYCG 1 cut(s) 1040
BsiHKAI GWGCWC 2 cut(s) 14, 395
BsiHKCI CYCGRG 5 cut(s) 95, 186, 388, 1133, 1646
BsiWI CGTACG 1 cut(s) 651
BslFI GGGAC 7 cut(s) 169, 329, 389, 413, 1116, 1121, 1711
BsmAI GTCTC 4 cut(s) 290, 567, 1142, 1490
BsmBI CGTCTC 1 cut(s) 290
BsmFI GGGAC 7 cut(s) 169, 329, 389, 413, 1116, 1121, 1711
BsmI GAATGC 2 cut(s) 1848, 1929
BsnI GGCC 3 cut(s) 86, 1651, 1851
Bso31I GGTCTC 1 cut(s) 567
BsoBI CYCGRG 5 cut(s) 95, 186, 388, 1133, 1646
Bsp119I TTCGAA 1 cut(s) 551
Bsp1286I GDGCHC 4 cut(s) 14, 395, 527, 1179
Bsp13I TCCGGA 3 cut(s) 18, 937, 1051
Bsp68I TCGCGA 1 cut(s) 752
BspANI GGCC 3 cut(s) 86, 1651, 1851
BspCNI CTCAG 2 cut(s) 1237, 1255
BspEI TCCGGA 3 cut(s) 18, 937, 1051
BspFNI CGCG 4 cut(s) 241, 243, 332, 752
BspMAI CTGCAG 2 cut(s) 771, 1459
BspMI ACCTGC 1 cut(s) 1660
BspQI GCTCTTC 1 cut(s) 1686
BspT104I TTCGAA 1 cut(s) 551
BspT107I GGYRCC 2 cut(s) 4, 344
BspTNI GGTCTC 1 cut(s) 567
BsrBI CCGCTC 2 cut(s) 742, 1688
BsrDI GCAATG 2 cut(s) 1640, 1914
BsrFI RCCGGY 2 cut(s) 1361, 1957
BsrI ACTGG 5 cut(s) 251, 502, 1166, 1488, 1621
BssAI RCCGGY 2 cut(s) 1361, 1957
BssNI GRCGYC 3 cut(s) 5, 119, 176
BssSI CACGAG 2 cut(s) 125, 394
BssT1I CCWWGG 4 cut(s) 66, 1116, 1833, 1852
Bst2BI CACGAG 2 cut(s) 125, 394
Bst2UI CCWGG 3 cut(s) 646, 1368, 1706
Bst4CI ACNGT 4 cut(s) 284, 824, 1702, 1744
Bst6I CTCTTC 2 cut(s) 692, 1686
BstACI GRCGYC 3 cut(s) 5, 119, 176
BstAPI GCANNNNNTGC 1 cut(s) 1795
BstBI TTCGAA 1 cut(s) 551
BstC8I GCNNGC 6 cut(s) 76, 142, 205, 1212, 1862, 1963
BstDEI CTNAG 3 cut(s) 816, 1245, 1263
BstENI CCTNNNNNAGG 1 cut(s) 415
BstF5I GGATG 5 cut(s) 136, 639, 1548, 1567, 1953
BstFNI CGCG 4 cut(s) 241, 243, 332, 752
BstH2I RGCGCY 4 cut(s) 8, 260, 269, 1208
BstHHI GCGC 8 cut(s) 7, 243, 259, 268, 385, 1207, 1216, 1664
BstMAI GTCTC 4 cut(s) 290, 567, 1142, 1490
BstMCI CGRYCG 1 cut(s) 1040
BstNI CCWGG 3 cut(s) 646, 1368, 1706
BstNSI RCATGY 2 cut(s) 1570, 1598
BstSFI CTRYAG 2 cut(s) 767, 1455
BstUI CGCG 4 cut(s) 241, 243, 332, 752
BstV2I GAAGAC 2 cut(s) 242, 540
BstX2I RGATCY 3 cut(s) 1546, 1720, 1774
BstXI CCANNNNNNTGG 3 cut(s) 82, 811, 1616
BstYI RGATCY 3 cut(s) 1546, 1720, 1774
Bsu36I CCTNAGG 1 cut(s) 1245
BsuI GTATCC 2 cut(s) 945, 1059
BsuRI GGCC 3 cut(s) 86, 1651, 1851
BtgZI GCGATG 1 cut(s) 46
BtrI CACGTC 1 cut(s) 154
BtsCI GGATG 5 cut(s) 136, 639, 1548, 1567, 1953
BtsI GCAGTG 1 cut(s) 1882
BtsIMutI CAGTG 2 cut(s) 1173, 1882
BtuMI TCGCGA 1 cut(s) 752
BveI ACCTGC 1 cut(s) 1660
Cac8I GCNNGC 6 cut(s) 76, 142, 205, 1212, 1862, 1963
CaiI CAGNNNCTG 2 cut(s) 775, 1816
CfoI GCGC 8 cut(s) 7, 243, 259, 268, 385, 1207, 1216, 1664
Cfr10I RCCGGY 2 cut(s) 1361, 1957
Cfr13I GGNCC 9 cut(s) 43, 85, 91, 277, 400, 642, 1113, 1364, 1649
Cfr9I CCCGGG 2 cut(s) 186, 1646
CseI GACGC 3 cut(s) 178, 215, 247
Csp6I GTAC 8 cut(s) 328, 345, 433, 592, 652, 847, 1602, 1885
CviAII CATG 2 cut(s) 1567, 1595
CviQI GTAC 8 cut(s) 328, 345, 433, 592, 652, 847, 1602, 1885
DdeI CTNAG 3 cut(s) 816, 1245, 1263
DinI GGCGCC 1 cut(s) 6
DrdI GACNNNNNNGTC 4 cut(s) 98, 175, 181, 1700
DseDI GACNNNNNNGTC 4 cut(s) 98, 175, 181, 1700
Eam1104I CTCTTC 2 cut(s) 692, 1686
EarI CTCTTC 2 cut(s) 692, 1686
EciI GGCGGA 3 cut(s) 397, 555, 1787
Ecl136II GAGCTC 1 cut(s) 393
Eco130I CCWWGG 4 cut(s) 66, 1116, 1833, 1852
Eco24I GRGCYC 3 cut(s) 395, 527, 1179
Eco31I GGTCTC 1 cut(s) 567
Eco47I GGWCC 7 cut(s) 43, 91, 277, 400, 642, 1113, 1364
Eco47III AGCGCT 1 cut(s) 1206
Eco53kI GAGCTC 1 cut(s) 393
Eco57I CTGAAG 1 cut(s) 531
Eco81I CCTNAGG 1 cut(s) 1245
Eco88I CYCGRG 5 cut(s) 95, 186, 388, 1133, 1646
EcoICRI GAGCTC 1 cut(s) 393
EcoNI CCTNNNNNAGG 1 cut(s) 415
EcoRII CCWGG 3 cut(s) 644, 1366, 1704
EcoT14I CCWWGG 4 cut(s) 66, 1116, 1833, 1852
EcoT38I GRGCYC 3 cut(s) 395, 527, 1179
EgeI GGCGCC 1 cut(s) 6
EheI GGCGCC 1 cut(s) 6
ErhI CCWWGG 4 cut(s) 66, 1116, 1833, 1852
Esp3I CGTCTC 1 cut(s) 290
FaeI CATG 2 cut(s) 1570, 1598
FalI AAGNNNNNCTT 2 cut(s) 1778, 1810
FaqI GGGAC 7 cut(s) 169, 329, 389, 413, 1116, 1121, 1711
FatI CATG 2 cut(s) 1566, 1594
FauI CCCGC 3 cut(s) 356, 536, 1693
FbaI TGATCA 1 cut(s) 1573
FokI GGATG 5 cut(s) 143, 646, 1555, 1574, 1960
FriOI GRGCYC 3 cut(s) 395, 527, 1179
GlaI GCGC 8 cut(s) 6, 242, 258, 267, 384, 1206, 1215, 1663
GsuI CTGGAG 4 cut(s) 1149, 1434, 1674, 1799
HaeII RGCGCY 4 cut(s) 8, 260, 269, 1208
HaeIII GGCC 3 cut(s) 86, 1651, 1851
HgaI GACGC 3 cut(s) 178, 215, 247
HhaI GCGC 8 cut(s) 7, 243, 259, 268, 385, 1207, 1216, 1664
Hin1I GRCGYC 3 cut(s) 5, 119, 176
Hin1II CATG 2 cut(s) 1570, 1598
Hin6I GCGC 8 cut(s) 5, 241, 257, 266, 383, 1205, 1214, 1662
HinP1I GCGC 8 cut(s) 5, 241, 257, 266, 383, 1205, 1214, 1662
HincII GTYRAC 1 cut(s) 199
HindII GTYRAC 1 cut(s) 199
HindIII AAGCTT 1 cut(s) 1401
HinfI GANTC 9 cut(s) 163, 358, 668, 676, 1022, 1129, 1336, 1447, 1714
HphI GGTGA 6 cut(s) 685, 868, 1279, 1423, 1723, 1945
Hpy166II GTNNAC 5 cut(s) 199, 280, 328, 847, 1936
Hpy188I TCNGA 6 cut(s) 32, 168, 367, 444, 1045, 1414
Hpy8I GTNNAC 5 cut(s) 199, 280, 328, 847, 1936
Hpy99I CGWCG 4 cut(s) 121, 124, 299, 1045
HpyAV CCTTC 5 cut(s) 333, 1135, 1252, 1764, 1832
HpyCH4III ACNGT 4 cut(s) 284, 824, 1702, 1744
HpyCH4IV ACGT 4 cut(s) 119, 153, 176, 195
HpyCH4V TGCA 9 cut(s) 769, 1060, 1328, 1457, 1628, 1765, 1846, 1864, 1912
HpyF3I CTNAG 3 cut(s) 816, 1245, 1263
HpySE526I ACGT 4 cut(s) 119, 153, 176, 195
Hsp92I GRCGYC 3 cut(s) 5, 119, 176
Hsp92II CATG 2 cut(s) 1570, 1598
HspAI GCGC 8 cut(s) 5, 241, 257, 266, 383, 1205, 1214, 1662
KasI GGCGCC 1 cut(s) 4
Kpn2I TCCGGA 3 cut(s) 18, 937, 1051
KpnI GGTACC 1 cut(s) 348
Ksp22I TGATCA 1 cut(s) 1573
LguI GCTCTTC 1 cut(s) 1686
LweI GCATC 8 cut(s) 63, 69, 261, 447, 949, 1315, 1742, 1938
MaeII ACGT 4 cut(s) 119, 153, 176, 195
MaeIII GTNAC 2 cut(s) 712, 1429
MbiI CCGCTC 2 cut(s) 742, 1688
MboII GAAGA 6 cut(s) 247, 524, 540, 709, 1673, 1795
MfeI CAATTG 1 cut(s) 1610
MflI RGATCY 3 cut(s) 1546, 1720, 1774
MhlI GDGCHC 4 cut(s) 14, 395, 527, 1179
MluCI AATT 5 cut(s) 553, 577, 702, 1507, 1610
Mly113I GGCGCC 1 cut(s) 5
MlyI GAGTC 4 cut(s) 662, 685, 1138, 1441
MmeI TCCRAC 3 cut(s) 759, 1023, 1539
MroI TCCGGA 3 cut(s) 18, 937, 1051
MseI TTAA 3 cut(s) 948, 1200, 1739
MslI CAYNNNNRTG 2 cut(s) 129, 156
MspA1I CMGCKG 6 cut(s) 480, 492, 874, 1322, 1454, 1816
MunI CAATTG 1 cut(s) 1610
Mva1269I GAATGC 2 cut(s) 1848, 1929
MvaI CCWGG 3 cut(s) 646, 1368, 1706
MvnI CGCG 4 cut(s) 241, 243, 332, 752
NarI GGCGCC 1 cut(s) 5
NciI CCSGG 9 cut(s) 89, 187, 188, 305, 1464, 1647, 1648, 1653, 1882
NlaIII CATG 2 cut(s) 1570, 1598
NmeAIII GCCGAG 3 cut(s) 33, 597, 1415
NmuCI GTSAC 2 cut(s) 712, 1429
NruI TCGCGA 1 cut(s) 752
NspI RCATGY 2 cut(s) 1570, 1598
NspV TTCGAA 1 cut(s) 551
OliI CACNNNNGTG 1 cut(s) 156
PaeR7I CTCGAG 2 cut(s) 95, 388
PaqCI CACCTGC 1 cut(s) 1660
PciSI GCTCTTC 1 cut(s) 1686
PcsI WCGNNNNNNNCGW 2 cut(s) 218, 685
PctI GAATGC 2 cut(s) 1848, 1929
PfeI GAWTC 5 cut(s) 163, 358, 1022, 1336, 1714
Pfl23II CGTACG 1 cut(s) 651
PflMI CCANNNNNTGG 1 cut(s) 1961
PleI GAGTC 4 cut(s) 662, 684, 1137, 1441
PluTI GGCGCC 1 cut(s) 8
PpsI GAGTC 4 cut(s) 662, 684, 1137, 1441
Psp124BI GAGCTC 1 cut(s) 395
Psp6I CCWGG 3 cut(s) 644, 1366, 1704
PspGI CCWGG 3 cut(s) 644, 1366, 1704
PspLI CGTACG 1 cut(s) 651
PspPI GGNCC 9 cut(s) 43, 85, 91, 277, 400, 642, 1113, 1364, 1649
PspXI VCTCGAGB 2 cut(s) 95, 388
PstI CTGCAG 2 cut(s) 771, 1459
PstNI CAGNNNCTG 2 cut(s) 775, 1816
PsuI RGATCY 3 cut(s) 1546, 1720, 1774
PvuII CAGCTG 4 cut(s) 874, 1322, 1454, 1816
RruI TCGCGA 1 cut(s) 752
RsaI GTAC 8 cut(s) 329, 346, 434, 593, 653, 848, 1603, 1886
RsaNI GTAC 8 cut(s) 328, 345, 433, 592, 652, 847, 1602, 1885
RseI CAYNNNNRTG 2 cut(s) 129, 156
SacI GAGCTC 1 cut(s) 395
SapI GCTCTTC 1 cut(s) 1686
SaqAI TTAA 3 cut(s) 948, 1200, 1739
Sau96I GGNCC 9 cut(s) 43, 85, 91, 277, 400, 642, 1113, 1364, 1649
ScaI AGTACT 1 cut(s) 1603
SchI GAGTC 4 cut(s) 662, 685, 1138, 1441
SduI GDGCHC 4 cut(s) 14, 395, 527, 1179
SfaNI GCATC 8 cut(s) 63, 69, 261, 447, 949, 1315, 1742, 1938
SfcI CTRYAG 2 cut(s) 767, 1455
SfoI GGCGCC 1 cut(s) 6
Sfr274I CTCGAG 2 cut(s) 95, 388
SfuI TTCGAA 1 cut(s) 551
SinI GGWCC 7 cut(s) 43, 91, 277, 400, 642, 1113, 1364
SlaI CTCGAG 2 cut(s) 95, 388
SmaI CCCGGG 2 cut(s) 188, 1648
SmiMI CAYNNNNRTG 2 cut(s) 129, 156
SmlI CTYRAG 4 cut(s) 95, 260, 388, 449
SmoI CTYRAG 4 cut(s) 95, 260, 388, 449
SrfI GCCCGGGC 1 cut(s) 1648
Sse9I AATT 5 cut(s) 553, 577, 702, 1507, 1610
SspDI GGCGCC 1 cut(s) 4
SstI GAGCTC 1 cut(s) 395
StyI CCWWGG 4 cut(s) 66, 1116, 1833, 1852
TaaI ACNGT 4 cut(s) 284, 824, 1702, 1744
TaiI ACGT 4 cut(s) 122, 156, 179, 198
TaqI TCGA 9 cut(s) 96, 221, 389, 551, 610, 679, 924, 957, 1514
TaqII GACCGA 1 cut(s) 1026
TasI AATT 5 cut(s) 553, 577, 702, 1507, 1610
TatI WGTACW 2 cut(s) 432, 1601
TauI GCSGC 5 cut(s) 534, 571, 977, 1733, 1954
TfiI GAWTC 5 cut(s) 163, 358, 1022, 1336, 1714
Tru1I TTAA 3 cut(s) 948, 1200, 1739
Tru9I TTAA 3 cut(s) 948, 1200, 1739
TscAI CASTG 2 cut(s) 1173, 1882
TseFI GTSAC 2 cut(s) 712, 1429
Tsp45I GTSAC 2 cut(s) 712, 1429
TspDTI ATGAA 4 cut(s) 633, 677, 746, 1205
TspGWI ACGGA 4 cut(s) 146, 609, 1905, 1953
TspMI CCCGGG 2 cut(s) 186, 1646
TspRI CASTG 2 cut(s) 1173, 1882
Van91I CCANNNNNTGG 1 cut(s) 1961
VpaK11BI GGWCC 7 cut(s) 43, 91, 277, 400, 642, 1113, 1364
XagI CCTNNNNNAGG 1 cut(s) 415
XapI RAATTY 1 cut(s) 553
XceI RCATGY 2 cut(s) 1570, 1598
XcmI CCANNNNNNNNNTGG 1 cut(s) 1616
XhoI CTCGAG 2 cut(s) 95, 388
XmaI CCCGGG 2 cut(s) 186, 1646
ZraI GACGTC 2 cut(s) 120, 177
ZrmI AGTACT 1 cut(s) 1603
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.