RchiOBHm_Chr6g0297851

Clathrin assembly protein

Basic Information

Type: gene
Biological Identity
rosa_chinensis
6
Physical Location & Seq
Forward (+)
59479758 .. 59482643
2886 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ26735

Sequence Viewer

Length: 2034 bp
ATGGCGCCGAGCACGATCCGGAAGGCGATCGGAGCCGTCAAGGACCAGACGAGCATCGGAATCGCGAAGGTCGCCAGCAACATGGCGCCGGACCTGGAGGTCGCCATCGTGAAGGCCACCAGCCACGAGGACGAGCCGGCCGGCGAGAAGTACATCCGGGAGATCCTCCAGCTGACGTCATACTCCCGGGGATACGTCCACGCGTGCGTGTCGGCGGTGTCCAAGCGACTGGGGAAGACGCGCGACTGGATCGTGGCGCTGAAGGCGTTGATGCTGGTGCACCGCCTCATGAACGACGGCGACCCGGTCTTCCAGGACGAGATCCTCTACGCCACGCGCAAGGGCACCAGGCTGCTGAACCTGTCCGATTTCAGGGACGAGGCTCACTCCAGCTCCTGGGATCACTCAGCCTTTGTGAGGACTTTTGCTATGTACTTGGACCAGAGGCTTGATTTGATTCTTTTCGAGAGGAAGGGTGGTAGTGGTACTACTCCGGCCAGGGACCTGGGGTCTAATTCCAGAGACAGCGGCGGTTCTGGAAATTTCCGGTCTCCGCCGCCGAGGCCGAACTATGAGTATGAGTATGGGGGAGAGGCCAGGGAGTATGAGAATGGAGGAGGGATGAGGCGGTCCAGATCTTATGACTATGATAATGGAGGAGGAATGAGGAGGTCAAGGTCTTATGGAGATGTGAGTGAGTCTGCGAAATCGGAGAAGAGAGTTGTGACTCCGTTGAGGGAAATGAAGCCGGAGAGGATTTTCGGCAAAATGGGGCACTTGCAGAGGCTGTTGGATCGGTTTCTGTCGATCCGGCCCACCGGGTTGGCCAAGAACAATAGGATGATTCTGATTGCTTTGTACCCGGTGGTGAGGGAGAGCTTTCAGCTGTATGCCGACATTTGCGAGGTTTTGGCGGTTTTGCTTGATAAGTTTTTCGATATGGAGTATACCGATTGTGTGAAGGCGTTTGAGGCTTATGCCAGTGCGGCTAAGCAGATTGATGAGCTTGTTGCGTTCTATAGTTGGTGCAAGGACACTGGGGTTGCCAGGTCGTCAGAGTATCCAGAGATTCAGAAGATTGGGAGTAAGTTATTGGAGACATTGGAGGAGTTTGTGAGGGACAGAAGTAAGAGAGGCAAGAGTCCTGAGAGGAGAGAGGAGCTTCCGGCTCCGGTGGCTCAGGAGGAGGAGCCCCAACCTGATATGAATGAGATGAAGGCTTTGCCTGCGCCGGAGAATTGGACTCCTCCACCCCCACCTGAGCCGGAGCCTCAGCCAAAGCCTCAACCAGTGGTCCAAGAAGACTTGGTGGATTTGAGAGATAATGGGGTTTCAGCTGATAATCAGGGGAATAACATGGCTTTGGCTTTGTTTGCTGGTCCTGCCGCTAATGGCAATACAAATGGTTCTTGGGAAGCATTCCCTTCAGATGGGCAACCCCAAGTCACCTCAGCTTGGCAGAATCCGGCTGCAGAACCCGGAAAGGCCGATTGGGAACTTGCTCTGGTCGAGACAGCAAGCAATTTAACCCACCAGAAAGCAGCAATGGGTGGTGGATTGGATCCATTGTTGTTGAATGGTATGTATGATCAGGGCATTGTGAGGCAGCATGTCGGCACTGCCGAATTGAGTGGTGGAAGTGCAAGTAGTGTTGCATTGCCCGGGCCCGGGAAGAGCGCTACACCCGTATTAGCTCTTCCTGCCCCTGACGGCACAGTGATGCCAGTGAATCAGGACCCGTTTGCCGCATCATTGACCATTCCACCTCCTTCCTATGTGCAAATGGCTGATATGGAGAAGAAGCAGCATTTACTTGTGCAGGAACAGCAGGTGTGGAATCAATATGCCAAGGAAGGAATGCAGGGCCAGACTAGCTTGGCCAAAATGAACGGGGCCGGGTTCTACGGGGCACCTCCCATGCAGATGATGCCGTATGGAATGCCTCCGGTGAACGGAATGGGGCCACCCGCCGGCCTGTATTCTTGCTGCTACTTGTGCATGAAAATGGTGGGGGAAGAGGGGAATCGAAAATGA

Protein Analysis

677

Amino Acids

74.31

Weight (kDa)

5.56

Isoelectric Point (pI)

50.88

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ANTH PF07651 31 - 153 7.4e-37 ANTH domain
ANTH PF07651 233 - 374 2.3e-37 ANTH domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1819
AasI GACNNNNNNGTC 1 cut(s) 98
AatII GACGTC 1 cut(s) 179
Acc36I ACCTGC 1 cut(s) 1819
AccB1I GGYRCC 4 cut(s) 4, 85, 344, 1909
AccB7I CCANNNNNTGG 1 cut(s) 396
AccI GTMKAC 1 cut(s) 947
AccII CGCG 5 cut(s) 65, 203, 241, 243, 337
AccIII TCCGGA 1 cut(s) 18
AclWI GGATC 9 cut(s) 10, 157, 257, 316, 408, 801, 802, 1556, 1569
AcoI YGGCCR 4 cut(s) 138, 495, 825, 1878
AcsI RAATTY 1 cut(s) 541
AcuI CTGAAG 2 cut(s) 281, 1410
AcyI GRCGYC 3 cut(s) 5, 86, 176
AfaI GTAC 4 cut(s) 152, 434, 487, 860
AfeI AGCGCT 1 cut(s) 1678
AfiI CCNNNNNNNGG 9 cut(s) 372, 396, 417, 1430, 1455, 1667, 1668, 1952, 1970
AflIII ACRYGT 1 cut(s) 201
AgsI TTSAA 1 cut(s) 1576
AhdI GACNNNNNGTC 1 cut(s) 508
AjnI CCWGG 8 cut(s) 93, 312, 347, 395, 497, 504, 596, 1046
AjuI GAANNNNNNNTTGG 2 cut(s) 1474, 1506
Alw21I GWGCWC 2 cut(s) 14, 282
Alw26I GTCTC 4 cut(s) 516, 555, 1091, 1505
Alw44I GTGCAC 1 cut(s) 278
AlwI GGATC 9 cut(s) 10, 157, 257, 316, 408, 801, 802, 1556, 1569
AlwNI CAGNNNCTG 2 cut(s) 396, 787
Ama87I CYCGRG 3 cut(s) 186, 1661, 1667
Aor13HI TCCGGA 1 cut(s) 18
Aor51HI AGCGCT 1 cut(s) 1678
ApaI GGGCCC 1 cut(s) 1668
ApaLI GTGCAC 1 cut(s) 278
ApeKI GCWGC 6 cut(s) 352, 1469, 1541, 1606, 1804, 1986
ApoI RAATTY 1 cut(s) 541
AspLEI GCGC 7 cut(s) 7, 88, 243, 259, 339, 1231, 1679
AsuHPI GGTGA 3 cut(s) 880, 1438, 1960
AvaI CYCGRG 3 cut(s) 186, 1661, 1667
AvaII GGWCC 8 cut(s) 43, 91, 439, 502, 630, 1294, 1379, 1735
BaeGI GKGCMC 5 cut(s) 282, 347, 777, 1668, 1912
BalI TGGCCA 2 cut(s) 827, 1880
BamHI GGATCC 1 cut(s) 1561
BanI GGYRCC 4 cut(s) 4, 85, 344, 1909
BanII GRGCYC 2 cut(s) 1194, 1668
BarI GAAGNNNNNNTAC 2 cut(s) 1680, 1712
BauI CACGAG 1 cut(s) 125
BbsI GAAGAC 3 cut(s) 242, 301, 1308
Bbv12I GWGCWC 2 cut(s) 14, 282
BbvCI CCTCAGC 2 cut(s) 1272, 1450
BbvI GCAGC 6 cut(s) 339, 1456, 1553, 1618, 1816, 1973
BccI CCATC 2 cut(s) 113, 1424
BceAI ACGGC 4 cut(s) 20, 313, 1726, 1915
BcgI CGANNNNNNTGC 2 cut(s) 43, 77
BciT130I CCWGG 8 cut(s) 95, 314, 349, 397, 499, 506, 598, 1048
BciVI GTATCC 2 cut(s) 185, 1071
BclI TGATCA 1 cut(s) 1588
BcoDI GTCTC 4 cut(s) 516, 555, 1091, 1505
BfaI CTAG 1 cut(s) 1872
BfmI CTRYAG 2 cut(s) 1018, 1470
BfoI RGCGCY 4 cut(s) 8, 89, 260, 1680
BfuAI ACCTGC 1 cut(s) 1819
BfuI GTATCC 2 cut(s) 185, 1071
BglI GCCNNNNNGGC 2 cut(s) 562, 986
BglII AGATCT 1 cut(s) 635
BlpI GCTNAGC 1 cut(s) 990
Bme18I GGWCC 8 cut(s) 43, 91, 439, 502, 630, 1294, 1379, 1735
BmeRI GACNNNNNGTC 1 cut(s) 508
BmeT110I CYCGRG 3 cut(s) 186, 1661, 1667
BmrI ACTGGG 2 cut(s) 239, 1047
BmsI GCATC 5 cut(s) 63, 261, 1710, 1757, 1917
BmuI ACTGGG 2 cut(s) 239, 1047
BpiI GAAGAC 3 cut(s) 242, 301, 1308
BplI GAGNNNNNCTC 2 cut(s) 371, 403
BpmI CTGGAG 3 cut(s) 116, 152, 373
Bpu10I CCTNAGC 4 cut(s) 1179, 1260, 1272, 1450
Bpu1102I GCTNAGC 1 cut(s) 990
BsaHI GRCGYC 3 cut(s) 5, 86, 176
BsaI GGTCTC 1 cut(s) 555
BsaWI WCCGGW 4 cut(s) 18, 546, 1171, 1945
BsaXI ACNNNNNCTCC 2 cut(s) 377, 407
Bsc4I CCNNNNNNNGG 9 cut(s) 372, 396, 417, 1430, 1455, 1667, 1668, 1952, 1970
Bse118I RCCGGY 3 cut(s) 136, 140, 1970
Bse1I ACTGG 6 cut(s) 234, 251, 981, 1042, 1289, 1724
Bse3DI GCAATG 2 cut(s) 1551, 1655
BseAI TCCGGA 1 cut(s) 18
BseBI CCWGG 8 cut(s) 95, 314, 349, 397, 499, 506, 598, 1048
BseGI GGATG 3 cut(s) 153, 627, 846
BseLI CCNNNNNNNGG 9 cut(s) 372, 396, 417, 1430, 1455, 1667, 1668, 1952, 1970
BseMI GCAATG 2 cut(s) 1551, 1655
BseMII CTCAG 6 cut(s) 420, 1137, 1193, 1251, 1286, 1464
BseNI ACTGG 6 cut(s) 234, 251, 981, 1042, 1289, 1724
BseRI GAGGAG 9 cut(s) 630, 672, 682, 1121, 1165, 1172, 1199, 1202, 1236
BseSI GKGCMC 5 cut(s) 282, 347, 777, 1668, 1912
BseX3I CGGCCG 1 cut(s) 138
BseXI GCAGC 6 cut(s) 339, 1456, 1553, 1618, 1816, 1973
BsgI GTGCAG 1 cut(s) 1838
Bsh1236I CGCG 5 cut(s) 65, 203, 241, 243, 337
Bsh1285I CGRYCG 2 cut(s) 30, 141
BshNI GGYRCC 4 cut(s) 4, 85, 344, 1909
BsiEI CGRYCG 2 cut(s) 30, 141
BsiHKAI GWGCWC 2 cut(s) 14, 282
BsiHKCI CYCGRG 3 cut(s) 186, 1661, 1667
BslFI GGGAC 3 cut(s) 389, 515, 1133
BslI CCNNNNNNNGG 9 cut(s) 372, 396, 417, 1430, 1455, 1667, 1668, 1952, 1970
BsmAI GTCTC 4 cut(s) 516, 555, 1091, 1505
BsmFI GGGAC 3 cut(s) 389, 515, 1133
BsmI GAATGC 3 cut(s) 1418, 1863, 1944
Bso31I GGTCTC 1 cut(s) 555
BsoBI CYCGRG 3 cut(s) 186, 1661, 1667
Bsp120I GGGCCC 1 cut(s) 1664
Bsp1286I GDGCHC 7 cut(s) 14, 282, 347, 777, 1194, 1668, 1912
Bsp13I TCCGGA 1 cut(s) 18
Bsp1720I GCTNAGC 1 cut(s) 990
Bsp68I TCGCGA 1 cut(s) 65
BspCNI CTCAG 6 cut(s) 419, 1138, 1192, 1252, 1285, 1463
BspEI TCCGGA 1 cut(s) 18
BspFNI CGCG 5 cut(s) 65, 203, 241, 243, 337
BspHI TCATGA 1 cut(s) 288
BspMAI CTGCAG 1 cut(s) 1474
BspMI ACCTGC 1 cut(s) 1819
BspPI GGATC 9 cut(s) 10, 157, 257, 316, 408, 801, 802, 1556, 1569
BspQI GCTCTTC 2 cut(s) 1667, 1701
BspT107I GGYRCC 4 cut(s) 4, 85, 344, 1909
BspTNI GGTCTC 1 cut(s) 555
BsrDI GCAATG 2 cut(s) 1551, 1655
BsrFI RCCGGY 3 cut(s) 136, 140, 1970
BsrI ACTGG 6 cut(s) 234, 251, 981, 1042, 1289, 1724
BssAI RCCGGY 3 cut(s) 136, 140, 1970
BssNAI GTATAC 1 cut(s) 948
BssNI GRCGYC 3 cut(s) 5, 86, 176
BssSI CACGAG 1 cut(s) 125
BssT1I CCWWGG 1 cut(s) 1848
Bst1107I GTATAC 1 cut(s) 948
Bst2BI CACGAG 1 cut(s) 125
Bst2UI CCWGG 8 cut(s) 95, 314, 349, 397, 499, 506, 598, 1048
Bst4CI ACNGT 1 cut(s) 1717
Bst6I CTCTTC 4 cut(s) 710, 1667, 1701, 2010
BstACI GRCGYC 3 cut(s) 5, 86, 176
BstAPI GCANNNNNTGC 1 cut(s) 1927
BstC8I GCNNGC 7 cut(s) 76, 138, 142, 205, 1227, 1519, 1972
BstDEI CTNAG 7 cut(s) 406, 990, 1146, 1179, 1260, 1272, 1450
BstENI CCTNNNNNAGG 1 cut(s) 415
BstF5I GGATG 3 cut(s) 153, 627, 846
BstFNI CGCG 5 cut(s) 65, 203, 241, 243, 337
BstH2I RGCGCY 4 cut(s) 8, 89, 260, 1680
BstHHI GCGC 7 cut(s) 7, 88, 243, 259, 339, 1231, 1679
BstMAI GTCTC 4 cut(s) 516, 555, 1091, 1505
BstMCI CGRYCG 2 cut(s) 30, 141
BstNI CCWGG 8 cut(s) 95, 314, 349, 397, 499, 506, 598, 1048
BstNSI RCATGY 1 cut(s) 1613
BstSFI CTRYAG 2 cut(s) 1018, 1470
BstSLI GKGCMC 5 cut(s) 282, 347, 777, 1668, 1912
BstUI CGCG 5 cut(s) 65, 203, 241, 243, 337
BstV1I GCAGC 6 cut(s) 339, 1456, 1553, 1618, 1816, 1973
BstV2I GAAGAC 3 cut(s) 242, 301, 1308
BstX2I RGATCY 4 cut(s) 162, 321, 635, 1561
BstXI CCANNNNNNTGG 4 cut(s) 82, 229, 505, 823
BstYI RGATCY 4 cut(s) 162, 321, 635, 1561
BstZ17I GTATAC 1 cut(s) 948
BstZI CGGCCG 1 cut(s) 138
BsuI GTATCC 2 cut(s) 185, 1071
BtsCI GGATG 3 cut(s) 153, 627, 846
BtsI GCAGTG 1 cut(s) 1617
BtsIMutI CAGTG 6 cut(s) 988, 1035, 1296, 1617, 1722, 1731
BtuMI TCGCGA 1 cut(s) 65
BveI ACCTGC 1 cut(s) 1819
Cac8I GCNNGC 7 cut(s) 76, 138, 142, 205, 1227, 1519, 1972
CaiI CAGNNNCTG 2 cut(s) 396, 787
CciI TCATGA 1 cut(s) 288
CfoI GCGC 7 cut(s) 7, 88, 243, 259, 339, 1231, 1679
Cfr10I RCCGGY 3 cut(s) 136, 140, 1970
Cfr9I CCCGGG 3 cut(s) 186, 1661, 1667
CseI GACGC 1 cut(s) 247
Csp6I GTAC 4 cut(s) 151, 433, 486, 859
CviAII CATG 6 cut(s) 82, 289, 1357, 1610, 1918, 1999
CviQI GTAC 4 cut(s) 151, 433, 486, 859
DdeI CTNAG 7 cut(s) 406, 990, 1146, 1179, 1260, 1272, 1450
DinI GGCGCC 2 cut(s) 6, 87
DrdI GACNNNNNNGTC 1 cut(s) 98
DriI GACNNNNNGTC 1 cut(s) 508
DseDI GACNNNNNNGTC 1 cut(s) 98
EaeI YGGCCR 4 cut(s) 138, 495, 825, 1878
EagI CGGCCG 1 cut(s) 138
Eam1104I CTCTTC 4 cut(s) 710, 1667, 1701, 2010
Eam1105I GACNNNNNGTC 1 cut(s) 508
EarI CTCTTC 4 cut(s) 710, 1667, 1701, 2010
EciI GGCGGA 1 cut(s) 543
EclXI CGGCCG 1 cut(s) 138
Eco130I CCWWGG 1 cut(s) 1848
Eco24I GRGCYC 2 cut(s) 1194, 1668
Eco31I GGTCTC 1 cut(s) 555
Eco47I GGWCC 8 cut(s) 43, 91, 439, 502, 630, 1294, 1379, 1735
Eco47III AGCGCT 1 cut(s) 1678
Eco52I CGGCCG 1 cut(s) 138
Eco57I CTGAAG 2 cut(s) 281, 1410
Eco88I CYCGRG 3 cut(s) 186, 1661, 1667
EcoNI CCTNNNNNAGG 1 cut(s) 415
EcoO109I RGGNCCY 2 cut(s) 502, 1735
EcoRII CCWGG 8 cut(s) 93, 312, 347, 395, 497, 504, 596, 1046
EcoT14I CCWWGG 1 cut(s) 1848
EcoT38I GRGCYC 2 cut(s) 1194, 1668
EgeI GGCGCC 2 cut(s) 6, 87
EheI GGCGCC 2 cut(s) 6, 87
ErhI CCWWGG 1 cut(s) 1848
FaeI CATG 6 cut(s) 85, 292, 1360, 1613, 1921, 2002
FaqI GGGAC 3 cut(s) 389, 515, 1133
FatI CATG 6 cut(s) 81, 288, 1356, 1609, 1917, 1998
FauI CCCGC 1 cut(s) 1975
FbaI TGATCA 1 cut(s) 1588
FblI GTMKAC 1 cut(s) 947
FokI GGATG 3 cut(s) 140, 634, 853
FriOI GRGCYC 2 cut(s) 1194, 1668
FspBI CTAG 1 cut(s) 1872
GlaI GCGC 7 cut(s) 6, 87, 242, 258, 338, 1230, 1678
GsuI CTGGAG 3 cut(s) 116, 152, 373
HaeII RGCGCY 4 cut(s) 8, 89, 260, 1680
HgaI GACGC 1 cut(s) 247
HhaI GCGC 7 cut(s) 7, 88, 243, 259, 339, 1231, 1679
Hin1I GRCGYC 3 cut(s) 5, 86, 176
Hin1II CATG 6 cut(s) 85, 292, 1360, 1613, 1921, 2002
Hin6I GCGC 7 cut(s) 5, 86, 241, 257, 337, 1229, 1677
HinP1I GCGC 7 cut(s) 5, 86, 241, 257, 337, 1229, 1677
HphI GGTGA 3 cut(s) 880, 1438, 1960
Hpy166II GTNNAC 4 cut(s) 199, 280, 948, 1951
Hpy188I TCNGA 8 cut(s) 32, 59, 367, 712, 849, 1057, 1074, 1429
Hpy8I GTNNAC 4 cut(s) 199, 280, 948, 1951
Hpy99I CGWCG 1 cut(s) 299
HpyCH4III ACNGT 1 cut(s) 1717
HpyCH4IV ACGT 2 cut(s) 176, 195
HpyF3I CTNAG 7 cut(s) 406, 990, 1146, 1179, 1260, 1272, 1450
HpySE526I ACGT 2 cut(s) 176, 195
Hsp92I GRCGYC 3 cut(s) 5, 86, 176
Hsp92II CATG 6 cut(s) 85, 292, 1360, 1613, 1921, 2002
HspAI GCGC 7 cut(s) 5, 86, 241, 257, 337, 1229, 1677
KasI GGCGCC 2 cut(s) 4, 85
Kpn2I TCCGGA 1 cut(s) 18
KroI GCCGGC 3 cut(s) 136, 140, 1970
KroNI GCCGGC 3 cut(s) 138, 142, 1972
Ksp22I TGATCA 1 cut(s) 1588
LguI GCTCTTC 2 cut(s) 1667, 1701
LmnI GCTCC 6 cut(s) 32, 398, 1159, 1174, 1189, 1267
Lsp1109I GCAGC 6 cut(s) 339, 1456, 1553, 1618, 1816, 1973
LweI GCATC 5 cut(s) 63, 261, 1710, 1757, 1917
MaeI CTAG 1 cut(s) 1872
MaeII ACGT 2 cut(s) 176, 195
MaeIII GTNAC 2 cut(s) 724, 1444
MboII GAAGA 9 cut(s) 247, 301, 727, 1087, 1313, 1684, 1688, 1810, 2027
MflI RGATCY 4 cut(s) 162, 321, 635, 1561
MhlI GDGCHC 7 cut(s) 14, 282, 347, 777, 1194, 1668, 1912
MlsI TGGCCA 2 cut(s) 827, 1880
MluCI AATT 5 cut(s) 514, 541, 1237, 1522, 1625
MluI ACGCGT 1 cut(s) 201
MluNI TGGCCA 2 cut(s) 827, 1880
Mly113I GGCGCC 2 cut(s) 5, 86
MlyI GAGTC 4 cut(s) 707, 721, 1150, 1237
MmeI TCCRAC 1 cut(s) 771
Mox20I TGGCCA 2 cut(s) 827, 1880
MroI TCCGGA 1 cut(s) 18
MroNI GCCGGC 3 cut(s) 136, 140, 1970
MscI TGGCCA 2 cut(s) 827, 1880
MseI TTAA 1 cut(s) 1526
MslI CAYNNNNRTG 3 cut(s) 1718, 1922, 2003
Msp20I TGGCCA 2 cut(s) 827, 1880
MspA1I CMGCKG 4 cut(s) 172, 528, 886, 1337
Mva1269I GAATGC 3 cut(s) 1418, 1863, 1944
MvaI CCWGG 8 cut(s) 95, 314, 349, 397, 499, 506, 598, 1048
MvnI CGCG 5 cut(s) 65, 203, 241, 243, 337
NaeI GCCGGC 3 cut(s) 138, 142, 1972
NarI GGCGCC 2 cut(s) 5, 86
NgoMIV GCCGGC 3 cut(s) 136, 140, 1970
NlaIII CATG 6 cut(s) 85, 292, 1360, 1613, 1921, 2002
NmeAIII GCCGAG 2 cut(s) 33, 585
NmuCI GTSAC 2 cut(s) 724, 1444
NruI TCGCGA 1 cut(s) 65
NspI RCATGY 1 cut(s) 1613
PagI TCATGA 1 cut(s) 288
PaqCI CACCTGC 1 cut(s) 1819
PciSI GCTCTTC 2 cut(s) 1667, 1701
PcsI WCGNNNNNNNCGW 1 cut(s) 1620
PctI GAATGC 3 cut(s) 1418, 1863, 1944
PdiI GCCGGC 3 cut(s) 138, 142, 1972
PfeI GAWTC 8 cut(s) 60, 457, 844, 1069, 1462, 1729, 1837, 2023
PflFI GACNNNGTC 1 cut(s) 305
PflMI CCANNNNNTGG 1 cut(s) 396
PfoI TCCNGGA 2 cut(s) 156, 312
Ple19I CGATCG 1 cut(s) 30
PleI GAGTC 4 cut(s) 706, 721, 1149, 1237
PluTI GGCGCC 2 cut(s) 8, 89
PpsI GAGTC 4 cut(s) 706, 721, 1149, 1237
PpuMI RGGWCCY 2 cut(s) 502, 1735
Psp5II RGGWCCY 2 cut(s) 502, 1735
Psp6I CCWGG 8 cut(s) 93, 312, 347, 395, 497, 504, 596, 1046
PspGI CCWGG 8 cut(s) 93, 312, 347, 395, 497, 504, 596, 1046
PspOMI GGGCCC 1 cut(s) 1664
PspPPI RGGWCCY 2 cut(s) 502, 1735
PstI CTGCAG 1 cut(s) 1474
PstNI CAGNNNCTG 2 cut(s) 396, 787
PsuI RGATCY 4 cut(s) 162, 321, 635, 1561
PsyI GACNNNGTC 1 cut(s) 305
PvuI CGATCG 1 cut(s) 30
PvuII CAGCTG 3 cut(s) 172, 886, 1337
RruI TCGCGA 1 cut(s) 65
RsaI GTAC 4 cut(s) 152, 434, 487, 860
RsaNI GTAC 4 cut(s) 151, 433, 486, 859
RseI CAYNNNNRTG 3 cut(s) 1718, 1922, 2003
SapI GCTCTTC 2 cut(s) 1667, 1701
SaqAI TTAA 1 cut(s) 1526
SchI GAGTC 4 cut(s) 707, 721, 1150, 1237
SduI GDGCHC 7 cut(s) 14, 282, 347, 777, 1194, 1668, 1912
SfaNI GCATC 5 cut(s) 63, 261, 1710, 1757, 1917
SfcI CTRYAG 2 cut(s) 1018, 1470
SfoI GGCGCC 2 cut(s) 6, 87
SinI GGWCC 8 cut(s) 43, 91, 439, 502, 630, 1294, 1379, 1735
SmaI CCCGGG 3 cut(s) 188, 1663, 1669
SmiMI CAYNNNNRTG 3 cut(s) 1718, 1922, 2003
SrfI GCCCGGGC 1 cut(s) 1663
Sse9I AATT 5 cut(s) 514, 541, 1237, 1522, 1625
SspDI GGCGCC 2 cut(s) 4, 85
SspMI CTAG 1 cut(s) 1872
StyI CCWWGG 1 cut(s) 1848
TaaI ACNGT 1 cut(s) 1717
TaiI ACGT 2 cut(s) 179, 198
TaqI TCGA 5 cut(s) 465, 806, 936, 1509, 2026
TasI AATT 5 cut(s) 514, 541, 1237, 1522, 1625
TatI WGTACW 2 cut(s) 150, 432
TauI GCSGC 5 cut(s) 531, 559, 989, 1388, 1748
TfiI GAWTC 8 cut(s) 60, 457, 844, 1069, 1462, 1729, 1837, 2023
Tru1I TTAA 1 cut(s) 1526
Tru9I TTAA 1 cut(s) 1526
TscAI CASTG 6 cut(s) 988, 1042, 1296, 1624, 1722, 1731
TseFI GTSAC 2 cut(s) 724, 1444
TseI GCWGC 6 cut(s) 352, 1469, 1541, 1606, 1804, 1986
Tsp45I GTSAC 2 cut(s) 724, 1444
TspDTI ATGAA 6 cut(s) 305, 758, 1220, 1229, 1901, 2015
TspGWI ACGGA 2 cut(s) 720, 1968
TspMI CCCGGG 3 cut(s) 186, 1661, 1667
TspRI CASTG 6 cut(s) 988, 1042, 1296, 1624, 1722, 1731
Tth111I GACNNNGTC 1 cut(s) 305
Van91I CCANNNNNTGG 1 cut(s) 396
VneI GTGCAC 1 cut(s) 278
VpaK11BI GGWCC 8 cut(s) 43, 91, 439, 502, 630, 1294, 1379, 1735
XagI CCTNNNNNAGG 1 cut(s) 415
XapI RAATTY 1 cut(s) 541
XceI RCATGY 1 cut(s) 1613
XmaI CCCGGG 3 cut(s) 186, 1661, 1667
XmiI GTMKAC 1 cut(s) 947
XspI CTAG 1 cut(s) 1872
ZraI GACGTC 1 cut(s) 177
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.