Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr3

Orthogroup ID

OG0007185

Physical Location & Seq

Genomic Coordinates Reverse (-)

10512483 .. 10514477

Gene Structure 1995 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000011556

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1995 bp

ATGGCGCCGAGCACGATCCGGAAGGCGATCGGAGCCGTCAAGGACCAGACGAGCATCGGAATCGCGAAGGTCGCCAGCAACATGGCGCCGGACCTGGAGGTCGCCATCGTGAAGGCCACCAGCCACGAGGACGAGCCGGCCGGCGAGAAGTACATCCGGGAGATCCTCCAGCTGACGTCATACTCCCGGGGATACATCCACGCGTGCGTGTCGGCGGTGTCGAAGCGACTGGGGAAGACGCGCGACTGGATTGTGGCGCTCAAGGCGTTGATGCTGGTGCACCGCCTCATGAACGACGGCGACCCGGTCTTCCAGGACGAGATCCTCTACGCCACGCGCAAGGGCACCAGGCTGCTGAACCTGTCCGATTTCAGGGACGAGGCTCACTCCAGCTCATGGGATCACTCTGCCTTTGTGAGGACTTTTGCTATGTACTTGGACCAGAGGCTTGATTTGATTCTTTTCGAGAGGAAGAATGGTAGTGGTACTACTCCGGCCAGGGACCTGGGGTCTTATTCGAGAGACAGCGGCGGTTCTGGAAATTTCCGGTCTCCGCCGCCGAGGCCGAACTATGAGTATGAGTATGGGGGAGAGGCGAGGGAGTATGAGAATGGAGGAGGGATGAGGCGGTCTAGATCTTATGACTATGATAATGGAGGAGGAATGAGGAGGTCAAGGTCTTATGGAGATGTGAGTGAGTCTGCGAAATCGGAGAAGAGAGTTGTGACTCCGTTGAGGGAAATGAAGCCGGAGAGGATTTTCGGCAAAATGGGGCACTTGCAGAGGCTATTGGATCGGTTTCTGTCGATCCGGCCCACTGGGTTGGCCAAGAACAATAGGATGATTCTGATTGCTTTGTACCCGGTGGTGAGGGAGAGCTTTCAGCTGTATGCCGATATTTGCGAGGTTTTGGCGGTTTTGCTTGATAAGTTTTTTGATATGGAGTATACCGATTGTGTGAAGGCGTTTGAGGCTTATGCCAGTGCGGCTAAGCAGATCGATGAGCTTGTTGCGTTCTATAGTTGGTGCAAGGACACTGGGGTTGCCAGGTCGTCGGAGTATCCAGAGATTCAGAAGATTGGGAGTAAGTTATTGGAGACATTGGAGGAGTTTGTGAGGGACAGAAGTAAGAGAGGCAAGAGTCCTGAAAGGAGGGAGGAGCTTCCGGCTCCGGTGGCTCAGGAGGAGGAGCCCCAACCTGATATGAATGAGATGAAGGCTTTGCCTGCGCCGGAGAATTGGACTCCTCCACCCCCACCTGAGCCGGAGCCTCAGCCAAAGCCTCAACCAGTGGTCCAAGAAGACTTGGTGGATTTGAGAGATAATGGGGTTTCAGCTGATAATCAGGGGAATAACATGGCTTTGGCTTTGTTTGCTGGTCCTGCTGCTAATGGCAATACAAATGGTTCTTGGGAAGCATTCCCTTCAGATGGGCAGCCCCAAGTCACCTCAGCTTGGCAGAATCCAGCTGCAGAACCCGGAAAGGCCGATTGGGAACTTGCTCTGGTCGAGACAGCAAGCAATTTAACCCACCAGAAAGCAGCAATGGGTGGTGGATTGGATCCATTGTTGTTGAATGGTATGTATGATCAGGGCATTGTGAGGCAGCATGTCGGCACTGCCCAATTGAGTGGTGGAAGTGCAAGTAGTGTTGCATTGCCCGGGCCCGGGAAGAGCGCTACACCTGTATTAGCTCTTCCGGCCCCTGACGGCACAGTGATGCCAGTGAATCAGGACCCATTTGCCGCATCATTGACCATTCCACCTCCTTCCTATGTGCAAATGGCTGATATGGAGAAGAAGCAGCATTTACTTGTGCAGGAACAGCAGGTGTGGAATCAATATGCCAAGGAAGGAATGCAGGGCCAGACTAGCTTGGCCAAAATGAACGGGGCCGGGTTCTACGGGGCACCTCCCATGCAGATGATGCCGTATGGAATGCCTCCGGTGAACGGAATGGGGCCACCCGCCGGGTATTACTACGCTCCTTACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005829 GO:0005886 GO:0006810 GO:0006897 GO:0006898 GO:0008150 GO:0016020 GO:0016192 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0051179 GO:0051234 GO:0071944 GO:0072583 GO:0098657

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

ANTH

Protein Analysis

665

Amino Acids

73.04

Weight (kDa)

5.55

Isoelectric Point (pI)

50.88

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ANTH	PF07651	31 - 153	6.7e-37	ANTH domain
ANTH	PF07651	233 - 374	2.3e-37	ANTH domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007185)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G25430 AT4G32285 AT4G32285
fragaria_vesca	FvH4_2g28990 FvH4_2g28990 FvH4_2g28990 FvH4_2g28990
malus_domestica	MD00G1144700.v1.1 MD08G1150700.v1.1
prunus_persica	Prupe.1G481500_v2.0.a1 Prupe.1G481500_v2.0.a1
pyrus_communis	pycom08g12710 pycom15g11360
rosa_chinensis	RchiOBHm_Chr6g0297851
rosa_laevigata	RLG00000011556
rosa_multiflora	Rmu_sc0003137.1_g000015
rosa_roxburghii	Rroxscaffold_7G00170150 Rroxscaffold_7G00179000
rosa_rugosa	Rorug06G0275900 Rorug06G0276000
rosa_samantha	Rh6AG386600 Rh6BG395200 Rh6CG401000 Rh6DG387300
rosa_wichuraiana	Rw6G033690

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1819
AasI	GACNNNNNNGTC	1 cut(s)	98
AatII	GACGTC	1 cut(s)	179
Acc36I	ACCTGC	1 cut(s)	1819
AccB1I	GGYRCC	4 cut(s)	4, 85, 344, 1909
AccB7I	CCANNNNNTGG	1 cut(s)	396
AccI	GTMKAC	1 cut(s)	947
AccII	CGCG	5 cut(s)	65, 203, 241, 243, 337
AccIII	TCCGGA	1 cut(s)	18
AclWI	GGATC	8 cut(s)	10, 157, 316, 408, 801, 802, 1556, 1569
AcoI	YGGCCR	4 cut(s)	138, 495, 825, 1878
AcsI	RAATTY	1 cut(s)	541
AcuI	CTGAAG	1 cut(s)	1410
AcyI	GRCGYC	3 cut(s)	5, 86, 176
AfaI	GTAC	4 cut(s)	152, 434, 487, 860
AfeI	AGCGCT	1 cut(s)	1678
AfiI	CCNNNNNNNGG	9 cut(s)	372, 396, 417, 1430, 1455, 1667, 1668, 1952, 1970
AflIII	ACRYGT	1 cut(s)	201
AgsI	TTSAA	1 cut(s)	1576
AhdI	GACNNNNNGTC	1 cut(s)	508
AjnI	CCWGG	6 cut(s)	93, 312, 347, 497, 504, 1046
AjuI	GAANNNNNNNTTGG	2 cut(s)	1474, 1506
Alw21I	GWGCWC	2 cut(s)	14, 282
Alw26I	GTCTC	4 cut(s)	516, 555, 1091, 1505
Alw44I	GTGCAC	1 cut(s)	278
AlwI	GGATC	8 cut(s)	10, 157, 316, 408, 801, 802, 1556, 1569
Ama87I	CYCGRG	3 cut(s)	186, 1661, 1667
Aor13HI	TCCGGA	1 cut(s)	18
Aor51HI	AGCGCT	1 cut(s)	1678
ApaI	GGGCCC	1 cut(s)	1668
ApaLI	GTGCAC	1 cut(s)	278
ApeKI	GCWGC	7 cut(s)	352, 1385, 1435, 1469, 1541, 1606, 1804
ApoI	RAATTY	1 cut(s)	541
AspLEI	GCGC	7 cut(s)	7, 88, 243, 259, 339, 1231, 1679
AsuHPI	GGTGA	3 cut(s)	880, 1438, 1960
AvaI	CYCGRG	3 cut(s)	186, 1661, 1667
AvaII	GGWCC	7 cut(s)	43, 91, 439, 502, 1294, 1379, 1735
BaeGI	GKGCMC	5 cut(s)	282, 347, 777, 1668, 1912
BalI	TGGCCA	2 cut(s)	827, 1880
BamHI	GGATCC	1 cut(s)	1561
BanI	GGYRCC	4 cut(s)	4, 85, 344, 1909
BanII	GRGCYC	2 cut(s)	1194, 1668
BarI	GAAGNNNNNNTAC	2 cut(s)	1680, 1712
BauI	CACGAG	1 cut(s)	125
BbsI	GAAGAC	3 cut(s)	242, 301, 1308
Bbv12I	GWGCWC	2 cut(s)	14, 282
BbvCI	CCTCAGC	2 cut(s)	1272, 1450
BbvI	GCAGC	7 cut(s)	339, 1372, 1447, 1456, 1553, 1618, 1816
BccI	CCATC	2 cut(s)	113, 1424
BceAI	ACGGC	4 cut(s)	20, 313, 1726, 1915
BcgI	CGANNNNNNTGC	2 cut(s)	43, 77
BciT130I	CCWGG	6 cut(s)	95, 314, 349, 499, 506, 1048
BciVI	GTATCC	2 cut(s)	185, 1071
BclI	TGATCA	1 cut(s)	1588
BcoDI	GTCTC	4 cut(s)	516, 555, 1091, 1505
BfaI	CTAG	2 cut(s)	633, 1872
BfmI	CTRYAG	2 cut(s)	1018, 1470
BfoI	RGCGCY	4 cut(s)	8, 89, 260, 1680
BfuAI	ACCTGC	1 cut(s)	1819
BfuI	GTATCC	2 cut(s)	185, 1071
BglI	GCCNNNNNGGC	2 cut(s)	562, 986
BglII	AGATCT	1 cut(s)	635
BlpI	GCTNAGC	1 cut(s)	990
Bme18I	GGWCC	7 cut(s)	43, 91, 439, 502, 1294, 1379, 1735
BmeRI	GACNNNNNGTC	1 cut(s)	508
BmeT110I	CYCGRG	3 cut(s)	186, 1661, 1667
BmrI	ACTGGG	3 cut(s)	239, 828, 1047
BmsI	GCATC	5 cut(s)	63, 261, 1710, 1757, 1917
BmuI	ACTGGG	3 cut(s)	239, 828, 1047
BpiI	GAAGAC	3 cut(s)	242, 301, 1308
BplI	GAGNNNNNCTC	2 cut(s)	371, 403
BpmI	CTGGAG	3 cut(s)	116, 152, 373
Bpu10I	CCTNAGC	4 cut(s)	1179, 1260, 1272, 1450
Bpu1102I	GCTNAGC	1 cut(s)	990
BpuEI	CTTGAG	1 cut(s)	245
Bsa29I	ATCGAT	1 cut(s)	999
BsaHI	GRCGYC	3 cut(s)	5, 86, 176
BsaI	GGTCTC	1 cut(s)	555
BsaJI	CCNNGG	8 cut(s)	186, 187, 498, 505, 560, 1661, 1667, 1848
BsaWI	WCCGGW	4 cut(s)	18, 546, 1171, 1945
Bsc4I	CCNNNNNNNGG	9 cut(s)	372, 396, 417, 1430, 1455, 1667, 1668, 1952, 1970
Bse118I	RCCGGY	2 cut(s)	136, 140
Bse1I	ACTGG	7 cut(s)	234, 251, 823, 981, 1042, 1289, 1724
Bse3DI	GCAATG	2 cut(s)	1551, 1655
BseAI	TCCGGA	1 cut(s)	18
BseBI	CCWGG	6 cut(s)	95, 314, 349, 499, 506, 1048
BseCI	ATCGAT	1 cut(s)	999
BseDI	CCNNGG	8 cut(s)	186, 187, 498, 505, 560, 1661, 1667, 1848
BseGI	GGATG	4 cut(s)	153, 195, 627, 846
BseLI	CCNNNNNNNGG	9 cut(s)	372, 396, 417, 1430, 1455, 1667, 1668, 1952, 1970
BseMI	GCAATG	2 cut(s)	1551, 1655
BseMII	CTCAG	4 cut(s)	1193, 1251, 1286, 1464
BseNI	ACTGG	7 cut(s)	234, 251, 823, 981, 1042, 1289, 1724
BseRI	GAGGAG	8 cut(s)	630, 672, 682, 1121, 1172, 1199, 1202, 1236
BseSI	GKGCMC	5 cut(s)	282, 347, 777, 1668, 1912
BseX3I	CGGCCG	1 cut(s)	138
BseXI	GCAGC	7 cut(s)	339, 1372, 1447, 1456, 1553, 1618, 1816
BsgI	GTGCAG	1 cut(s)	1838
Bsh1236I	CGCG	5 cut(s)	65, 203, 241, 243, 337
Bsh1285I	CGRYCG	2 cut(s)	30, 141
BshNI	GGYRCC	4 cut(s)	4, 85, 344, 1909
BshVI	ATCGAT	1 cut(s)	999
BsiEI	CGRYCG	2 cut(s)	30, 141
BsiHKAI	GWGCWC	2 cut(s)	14, 282
BsiHKCI	CYCGRG	3 cut(s)	186, 1661, 1667
BslFI	GGGAC	3 cut(s)	389, 515, 1133
BslI	CCNNNNNNNGG	9 cut(s)	372, 396, 417, 1430, 1455, 1667, 1668, 1952, 1970
BsmAI	GTCTC	4 cut(s)	516, 555, 1091, 1505
BsmFI	GGGAC	3 cut(s)	389, 515, 1133
BsmI	GAATGC	3 cut(s)	1418, 1863, 1944
Bso31I	GGTCTC	1 cut(s)	555
BsoBI	CYCGRG	3 cut(s)	186, 1661, 1667
Bsp120I	GGGCCC	1 cut(s)	1664
Bsp1286I	GDGCHC	7 cut(s)	14, 282, 347, 777, 1194, 1668, 1912
Bsp13I	TCCGGA	1 cut(s)	18
Bsp1720I	GCTNAGC	1 cut(s)	990
Bsp68I	TCGCGA	1 cut(s)	65
BspCNI	CTCAG	4 cut(s)	1192, 1252, 1285, 1463
BspDI	ATCGAT	1 cut(s)	999
BspEI	TCCGGA	1 cut(s)	18
BspFNI	CGCG	5 cut(s)	65, 203, 241, 243, 337
BspHI	TCATGA	1 cut(s)	288
BspMAI	CTGCAG	1 cut(s)	1474
BspMI	ACCTGC	1 cut(s)	1819
BspPI	GGATC	8 cut(s)	10, 157, 316, 408, 801, 802, 1556, 1569
BspQI	GCTCTTC	2 cut(s)	1667, 1701
BspT107I	GGYRCC	4 cut(s)	4, 85, 344, 1909
BspTNI	GGTCTC	1 cut(s)	555
BsrDI	GCAATG	2 cut(s)	1551, 1655
BsrFI	RCCGGY	2 cut(s)	136, 140
BsrI	ACTGG	7 cut(s)	234, 251, 823, 981, 1042, 1289, 1724
BssAI	RCCGGY	2 cut(s)	136, 140
BssECI	CCNNGG	8 cut(s)	186, 187, 498, 505, 560, 1661, 1667, 1848
BssNAI	GTATAC	1 cut(s)	948
BssNI	GRCGYC	3 cut(s)	5, 86, 176
BssSI	CACGAG	1 cut(s)	125
BssT1I	CCWWGG	1 cut(s)	1848
Bst1107I	GTATAC	1 cut(s)	948
Bst2BI	CACGAG	1 cut(s)	125
Bst2UI	CCWGG	6 cut(s)	95, 314, 349, 499, 506, 1048
Bst4CI	ACNGT	1 cut(s)	1717
Bst6I	CTCTTC	3 cut(s)	710, 1667, 1701
BstACI	GRCGYC	3 cut(s)	5, 86, 176
BstAPI	GCANNNNNTGC	1 cut(s)	1927
BstC8I	GCNNGC	6 cut(s)	76, 138, 142, 205, 1227, 1519
BstDEI	CTNAG	5 cut(s)	990, 1179, 1260, 1272, 1450
BstENI	CCTNNNNNAGG	1 cut(s)	415
BstF5I	GGATG	4 cut(s)	153, 195, 627, 846
BstFNI	CGCG	5 cut(s)	65, 203, 241, 243, 337
BstH2I	RGCGCY	4 cut(s)	8, 89, 260, 1680
BstHHI	GCGC	7 cut(s)	7, 88, 243, 259, 339, 1231, 1679
BstMAI	GTCTC	4 cut(s)	516, 555, 1091, 1505
BstMCI	CGRYCG	2 cut(s)	30, 141
BstNI	CCWGG	6 cut(s)	95, 314, 349, 499, 506, 1048
BstNSI	RCATGY	1 cut(s)	1613
BstSFI	CTRYAG	2 cut(s)	1018, 1470
BstSLI	GKGCMC	5 cut(s)	282, 347, 777, 1668, 1912
BstUI	CGCG	5 cut(s)	65, 203, 241, 243, 337
BstV1I	GCAGC	7 cut(s)	339, 1372, 1447, 1456, 1553, 1618, 1816
BstV2I	GAAGAC	3 cut(s)	242, 301, 1308
BstX2I	RGATCY	4 cut(s)	162, 321, 635, 1561
BstXI	CCANNNNNNTGG	4 cut(s)	82, 505, 823, 1631
BstYI	RGATCY	4 cut(s)	162, 321, 635, 1561
BstZ17I	GTATAC	1 cut(s)	948
BstZI	CGGCCG	1 cut(s)	138
Bsu15I	ATCGAT	1 cut(s)	999
BsuI	GTATCC	2 cut(s)	185, 1071
BsuTUI	ATCGAT	1 cut(s)	999
BtsCI	GGATG	4 cut(s)	153, 195, 627, 846
BtsI	GCAGTG	1 cut(s)	1617
BtsIMutI	CAGTG	7 cut(s)	816, 988, 1035, 1296, 1617, 1722, 1731
BtuMI	TCGCGA	1 cut(s)	65
BveI	ACCTGC	1 cut(s)	1819
Cac8I	GCNNGC	6 cut(s)	76, 138, 142, 205, 1227, 1519
CciI	TCATGA	1 cut(s)	288
CfoI	GCGC	7 cut(s)	7, 88, 243, 259, 339, 1231, 1679
Cfr10I	RCCGGY	2 cut(s)	136, 140
Cfr9I	CCCGGG	3 cut(s)	186, 1661, 1667
ClaI	ATCGAT	1 cut(s)	999
CseI	GACGC	1 cut(s)	247
Csp6I	GTAC	4 cut(s)	151, 433, 486, 859
CviAII	CATG	6 cut(s)	82, 289, 396, 1357, 1610, 1918
CviQI	GTAC	4 cut(s)	151, 433, 486, 859
DdeI	CTNAG	5 cut(s)	990, 1179, 1260, 1272, 1450
DinI	GGCGCC	2 cut(s)	6, 87
DrdI	GACNNNNNNGTC	1 cut(s)	98
DriI	GACNNNNNGTC	1 cut(s)	508
DseDI	GACNNNNNNGTC	1 cut(s)	98
EaeI	YGGCCR	4 cut(s)	138, 495, 825, 1878
EagI	CGGCCG	1 cut(s)	138
Eam1104I	CTCTTC	3 cut(s)	710, 1667, 1701
Eam1105I	GACNNNNNGTC	1 cut(s)	508
EarI	CTCTTC	3 cut(s)	710, 1667, 1701
EciI	GGCGGA	1 cut(s)	543
EclXI	CGGCCG	1 cut(s)	138
Eco130I	CCWWGG	1 cut(s)	1848
Eco24I	GRGCYC	2 cut(s)	1194, 1668
Eco31I	GGTCTC	1 cut(s)	555
Eco47I	GGWCC	7 cut(s)	43, 91, 439, 502, 1294, 1379, 1735
Eco47III	AGCGCT	1 cut(s)	1678
Eco52I	CGGCCG	1 cut(s)	138
Eco57I	CTGAAG	1 cut(s)	1410
Eco88I	CYCGRG	3 cut(s)	186, 1661, 1667
EcoNI	CCTNNNNNAGG	1 cut(s)	415
EcoO109I	RGGNCCY	2 cut(s)	502, 1735
EcoRII	CCWGG	6 cut(s)	93, 312, 347, 497, 504, 1046
EcoT14I	CCWWGG	1 cut(s)	1848
EcoT38I	GRGCYC	2 cut(s)	1194, 1668
EgeI	GGCGCC	2 cut(s)	6, 87
EheI	GGCGCC	2 cut(s)	6, 87
ErhI	CCWWGG	1 cut(s)	1848
FaeI	CATG	6 cut(s)	85, 292, 399, 1360, 1613, 1921
FaqI	GGGAC	3 cut(s)	389, 515, 1133
FatI	CATG	6 cut(s)	81, 288, 395, 1356, 1609, 1917
FauI	CCCGC	1 cut(s)	1975
FbaI	TGATCA	1 cut(s)	1588
FblI	GTMKAC	1 cut(s)	947
FokI	GGATG	4 cut(s)	140, 182, 634, 853
FriOI	GRGCYC	2 cut(s)	1194, 1668
FspBI	CTAG	2 cut(s)	633, 1872
GlaI	GCGC	7 cut(s)	6, 87, 242, 258, 338, 1230, 1678
GsuI	CTGGAG	3 cut(s)	116, 152, 373
HaeII	RGCGCY	4 cut(s)	8, 89, 260, 1680
HgaI	GACGC	1 cut(s)	247
HhaI	GCGC	7 cut(s)	7, 88, 243, 259, 339, 1231, 1679
Hin1I	GRCGYC	3 cut(s)	5, 86, 176
Hin1II	CATG	6 cut(s)	85, 292, 399, 1360, 1613, 1921
Hin6I	GCGC	7 cut(s)	5, 86, 241, 257, 337, 1229, 1677
HinP1I	GCGC	7 cut(s)	5, 86, 241, 257, 337, 1229, 1677
HphI	GGTGA	3 cut(s)	880, 1438, 1960
Hpy166II	GTNNAC	3 cut(s)	280, 948, 1951
Hpy188I	TCNGA	8 cut(s)	32, 59, 367, 712, 849, 1057, 1074, 1429
Hpy8I	GTNNAC	3 cut(s)	280, 948, 1951
Hpy99I	CGWCG	2 cut(s)	299, 1057
HpyAV	CCTTC	8 cut(s)	16, 61, 106, 955, 1210, 1434, 1779, 1847
HpyCH4III	ACNGT	1 cut(s)	1717
HpyCH4IV	ACGT	1 cut(s)	176
HpyF3I	CTNAG	5 cut(s)	990, 1179, 1260, 1272, 1450
HpySE526I	ACGT	1 cut(s)	176
Hsp92I	GRCGYC	3 cut(s)	5, 86, 176
Hsp92II	CATG	6 cut(s)	85, 292, 399, 1360, 1613, 1921
HspAI	GCGC	7 cut(s)	5, 86, 241, 257, 337, 1229, 1677
KasI	GGCGCC	2 cut(s)	4, 85
Kpn2I	TCCGGA	1 cut(s)	18
KroI	GCCGGC	2 cut(s)	136, 140
KroNI	GCCGGC	2 cut(s)	138, 142
Ksp22I	TGATCA	1 cut(s)	1588
LguI	GCTCTTC	2 cut(s)	1667, 1701
LmnI	GCTCC	6 cut(s)	32, 1159, 1174, 1189, 1267, 1990
Lsp1109I	GCAGC	7 cut(s)	339, 1372, 1447, 1456, 1553, 1618, 1816
LweI	GCATC	5 cut(s)	63, 261, 1710, 1757, 1917
MaeI	CTAG	2 cut(s)	633, 1872
MaeII	ACGT	1 cut(s)	176
MaeIII	GTNAC	2 cut(s)	724, 1444
MboII	GAAGA	9 cut(s)	247, 301, 484, 727, 1087, 1313, 1684, 1688, 1810
MfeI	CAATTG	1 cut(s)	1625
MflI	RGATCY	4 cut(s)	162, 321, 635, 1561
MhlI	GDGCHC	7 cut(s)	14, 282, 347, 777, 1194, 1668, 1912
MlsI	TGGCCA	2 cut(s)	827, 1880
MluCI	AATT	4 cut(s)	541, 1237, 1522, 1625
MluI	ACGCGT	1 cut(s)	201
MluNI	TGGCCA	2 cut(s)	827, 1880
Mly113I	GGCGCC	2 cut(s)	5, 86
MlyI	GAGTC	4 cut(s)	707, 721, 1150, 1237
MmeI	TCCRAC	1 cut(s)	1035
Mox20I	TGGCCA	2 cut(s)	827, 1880
MroI	TCCGGA	1 cut(s)	18
MroNI	GCCGGC	2 cut(s)	136, 140
MscI	TGGCCA	2 cut(s)	827, 1880
MseI	TTAA	1 cut(s)	1526
MslI	CAYNNNNRTG	2 cut(s)	1718, 1922
Msp20I	TGGCCA	2 cut(s)	827, 1880
MspA1I	CMGCKG	5 cut(s)	172, 528, 886, 1337, 1469
MunI	CAATTG	1 cut(s)	1625
Mva1269I	GAATGC	3 cut(s)	1418, 1863, 1944
MvaI	CCWGG	6 cut(s)	95, 314, 349, 499, 506, 1048
MvnI	CGCG	5 cut(s)	65, 203, 241, 243, 337
NaeI	GCCGGC	2 cut(s)	138, 142
NarI	GGCGCC	2 cut(s)	5, 86
NgoMIV	GCCGGC	2 cut(s)	136, 140
NlaIII	CATG	6 cut(s)	85, 292, 399, 1360, 1613, 1921
NmeAIII	GCCGAG	2 cut(s)	33, 585
NmuCI	GTSAC	2 cut(s)	724, 1444
NruI	TCGCGA	1 cut(s)	65
NspI	RCATGY	1 cut(s)	1613
PagI	TCATGA	1 cut(s)	288
PaqCI	CACCTGC	1 cut(s)	1819
PciSI	GCTCTTC	2 cut(s)	1667, 1701
PcsI	WCGNNNNNNNCGW	1 cut(s)	218
PctI	GAATGC	3 cut(s)	1418, 1863, 1944
PdiI	GCCGGC	2 cut(s)	138, 142
PfeI	GAWTC	7 cut(s)	60, 457, 844, 1069, 1462, 1729, 1837
PflFI	GACNNNGTC	1 cut(s)	305
PflMI	CCANNNNNTGG	1 cut(s)	396
PfoI	TCCNGGA	2 cut(s)	156, 312
Ple19I	CGATCG	1 cut(s)	30
PleI	GAGTC	4 cut(s)	706, 721, 1149, 1237
PluTI	GGCGCC	2 cut(s)	8, 89
PpsI	GAGTC	4 cut(s)	706, 721, 1149, 1237
PpuMI	RGGWCCY	2 cut(s)	502, 1735
Psp5II	RGGWCCY	2 cut(s)	502, 1735
Psp6I	CCWGG	6 cut(s)	93, 312, 347, 497, 504, 1046
PspGI	CCWGG	6 cut(s)	93, 312, 347, 497, 504, 1046
PspOMI	GGGCCC	1 cut(s)	1664
PspPPI	RGGWCCY	2 cut(s)	502, 1735
PstI	CTGCAG	1 cut(s)	1474
PsuI	RGATCY	4 cut(s)	162, 321, 635, 1561
PsyI	GACNNNGTC	1 cut(s)	305
PvuI	CGATCG	1 cut(s)	30
PvuII	CAGCTG	4 cut(s)	172, 886, 1337, 1469
RruI	TCGCGA	1 cut(s)	65
RsaI	GTAC	4 cut(s)	152, 434, 487, 860
RsaNI	GTAC	4 cut(s)	151, 433, 486, 859
RseI	CAYNNNNRTG	2 cut(s)	1718, 1922
SapI	GCTCTTC	2 cut(s)	1667, 1701
SaqAI	TTAA	1 cut(s)	1526
SchI	GAGTC	4 cut(s)	707, 721, 1150, 1237
SduI	GDGCHC	7 cut(s)	14, 282, 347, 777, 1194, 1668, 1912
SfaNI	GCATC	5 cut(s)	63, 261, 1710, 1757, 1917
SfcI	CTRYAG	2 cut(s)	1018, 1470
SfoI	GGCGCC	2 cut(s)	6, 87
SinI	GGWCC	7 cut(s)	43, 91, 439, 502, 1294, 1379, 1735
SmaI	CCCGGG	3 cut(s)	188, 1663, 1669
SmiMI	CAYNNNNRTG	2 cut(s)	1718, 1922
SmlI	CTYRAG	1 cut(s)	260
SmoI	CTYRAG	1 cut(s)	260
SrfI	GCCCGGGC	1 cut(s)	1663
Sse9I	AATT	4 cut(s)	541, 1237, 1522, 1625
SspDI	GGCGCC	2 cut(s)	4, 85
SspMI	CTAG	2 cut(s)	633, 1872
StyI	CCWWGG	1 cut(s)	1848
TaaI	ACNGT	1 cut(s)	1717
TaiI	ACGT	1 cut(s)	179
TaqI	TCGA	6 cut(s)	221, 465, 518, 806, 999, 1509
TasI	AATT	4 cut(s)	541, 1237, 1522, 1625
TatI	WGTACW	2 cut(s)	150, 432
TauI	GCSGC	4 cut(s)	531, 559, 989, 1748
TfiI	GAWTC	7 cut(s)	60, 457, 844, 1069, 1462, 1729, 1837
Tru1I	TTAA	1 cut(s)	1526
Tru9I	TTAA	1 cut(s)	1526
TscAI	CASTG	7 cut(s)	823, 988, 1042, 1296, 1624, 1722, 1731
TseFI	GTSAC	2 cut(s)	724, 1444
TseI	GCWGC	7 cut(s)	352, 1385, 1435, 1469, 1541, 1606, 1804
Tsp45I	GTSAC	2 cut(s)	724, 1444
TspDTI	ATGAA	5 cut(s)	305, 758, 1220, 1229, 1901
TspGWI	ACGGA	2 cut(s)	720, 1968
TspMI	CCCGGG	3 cut(s)	186, 1661, 1667
TspRI	CASTG	7 cut(s)	823, 988, 1042, 1296, 1624, 1722, 1731
Tth111I	GACNNNGTC	1 cut(s)	305
Van91I	CCANNNNNTGG	1 cut(s)	396
VneI	GTGCAC	1 cut(s)	278
VpaK11BI	GGWCC	7 cut(s)	43, 91, 439, 502, 1294, 1379, 1735
XagI	CCTNNNNNAGG	1 cut(s)	415
XapI	RAATTY	1 cut(s)	541
XbaI	TCTAGA	1 cut(s)	632
XceI	RCATGY	1 cut(s)	1613
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1631
XmaI	CCCGGG	3 cut(s)	186, 1661, 1667
XmiI	GTMKAC	1 cut(s)	947
XspI	CTAG	2 cut(s)	633, 1872
ZraI	GACGTC	1 cut(s)	177

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.