Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr08

Orthogroup ID

OG0009812

Physical Location & Seq

Genomic Coordinates Reverse (-)

19206120 .. 19212779

Gene Structure 6660 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD08G1163100.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2088 bp

ATGGGTCCTTACATTGTTGGTGCGTTTATTCCTCTGTTAGTAACTATAATAGTTCAGAAATCGAAGAAAGCGAAGCAACGGGGTGTGGCCGTTGATGTTGGTGGGGAACCCGGGTATGCAATCCGAAACCATCGGTATACTGCCCCAGTTCAAACACTATGGGAAACTGTTACAACTCTTGCAGAGCTTTTCGAGCAGTCATCCAAGCGGTTCCAGGATAAATGCCTTCTTGGAACCCGAGCATTGATTGCAAGGGAGGTTGAAGTATCAAAGGACGGAAGATCCTTCGAGAAGCTTCATTTGGGGGACTACGAATGGCTAACATATGGAAAGGCATTTGAAGTTGTATGCAACTTTGCTTCCGGTTTAGCTCAACTAGGGCATCAAAGGGAGGAGAGAGTGGCAATCTTTGCTGACACTAGAGAAGAGTGGTTTATTGCATTGCAGGGTTGTTTTAGGCGCAATGTCACTGTTGTTACCATATACGCATCTCTTGGGGAGGAGGCTCTATGTCACTCACTAAATGAGACAGAAGTTACAACTGTGATTTGTGGGCAAAAAGAACTGAAAAAACTTCTACACATAAGTGGACAACTAGACACGGTAAAGCGAATCATATGTCTGGATGACGAGATTCCGTCTAGTGCCTCATCTGTTGAAAGTCGATGGCAAATCACTTCATTTGAGGATGTCGAGAAACTTGGCCGAGAAAACCCTGTTGATGCTGATTTACCTCTTCCAGCAGATATTGCCGTCATTATGTATACAAGTGGAAGCACTGGATTACCCAAGGGTGTAATGATGACACATGCTAATGTGCTAGCTGTAGTTTCTGCCGTCATGACTATTGTTCCTGGCCTTGGAAGCAAGGATGTTTATCTGGCATATCTTCCCCTCGCTCATATCCTTGAATTAGCAGCGGAGAACGTCATGGTTGCTGTTGGAAGTTCCATAGGGTATGGATCTCCATTGACCCTTATTGATACATCAAGTAAAATAAAAAGGGGAACAAGGGGGGATGCAACTGCGCTTGCACCAACTGTATTGACAGCTGTCCCTGCAATTCTTGACCGTGTTCGAGATGGAGTGCTCAATAAGGTAAATGCAAAGGGTGGACTAGCCAAGAGATTGTTTCACTTGGCATATGCTCGTAGGTTGTCTTCTGTGAATGGCAGTTGGTTTGGGGCTTGGGGCCTGGAAAAGTTTCTGTGGGACCTTCTTGTGTTTAGAAAGGTCCGTGCTGTTCTAGGAGGTCATGTTCGTTTTATCCTTTCTGGTGGTGCCCCACTCTCGGGTGATACTCAAAGATTCATCAACATTTGCATTGGTTCTCCAATTGGCCAAGGGTATGGCCTCACTGAAACTTGCGCCGGCGGGACATTCTCAGAGTTCGATGATACTTCTGTAGGTCGAGTTGGAGCTCCCCTTCCTTGCTCATTTATAAAGTTAATTGATTGGGCTGAAGGAGGATATCTGAAAATCGATACCCCAATGCCTCGTGGAGAGATAGTCATTGGTGGCCCAAATGTTACACTTGGTTATTTCAAAAATGAAGAAAAAACAAGAGAGTCATACAAGGTTGATGAGAAGGGAATGAGGTGGTTCTATACGGGTGACATAGGGCGATTTCATGCTGATGGTTGTCTTGAGATAATTGACCGTAAGAAGGATATAGTCAAACTTCAGCATGGGGAGTATGTCTCCTTAGGAAAGGTTGAGGCTGCTCTTTCAGTTTGCCCCTTCGTCGACAACATCATGTTGCACGCTGATCCTTTTCATAGTTACTGTGTGGCTCTGGTGGTGGCTTCTCGAGTCACAGTGGAAGATTGGGCTTCAAAGCAAGGAATCGCTTTTACTGATTTTGCAGACTTGTGTTCGAAATCAGAAGCCATAAAAGAAGTGCAAGCATCACTTGTAAAGGAAGCAAAGAATGCGCGTTTGGAGAAGTTTGAGATCCCTGCCAAAATCAAGTTGCTTTCGGAACCATGGACTCCAGAAACCGGCCTGGTCACTGCAGCCCTGAAGCTCAAGAGAGATGTCATTAGGAAGGCGTTCTCAGAAGACCTCTCCAAGTTATACGCTTCGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001676 GO:0003674 GO:0003824 GO:0004467 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006082 GO:0006629 GO:0006631 GO:0008150 GO:0008152 GO:0009507 GO:0009526 GO:0009536 GO:0009941 GO:0009987 GO:0015645 GO:0016020 GO:0016405 GO:0016874 GO:0016877 GO:0016878 GO:0019752 GO:0031967 GO:0031975 GO:0032787 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0044237 GO:0044238 GO:0044255 GO:0044281 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0071704

KEGG Pathways

Metabolic & Signaling

ko00061 ko00071 ko01100 ko01212 ko02024 ko03320 ko04146 ko04216 ko04714 ko04920 map00061 map00071 map01100 map01212 map02024 map03320 map04146 map04216 map04714 map04920

Pfam Domains

Protein Families

AMP-binding

Protein Analysis

696

Amino Acids

76.09

Weight (kDa)

7.18

Isoelectric Point (pI)

29.39

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
AMP-binding	PF00501	100 - 515	1.3e-84	AMP-binding enzyme

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0009812)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G77590 AT1G77590
fragaria_vesca	FvH4_2g26850
malus_domestica	MD08G1163100.v1.1 MD15G1349800.v1.1
prunus_persica	Prupe.1G499000_v2.0.a1 Prupe.1G499000_v2.0.a1
pyrus_communis	pycom08g14100 pycom15g31290
rosa_chinensis	RchiOBHm_Chr6g0295701
rosa_laevigata	RLG00000011774
rosa_multiflora	Rmu_sc0007372.1_g000004 Rmu_sc0007986.1_g000001
rosa_roxburghii	Rroxscaffold_7G00172200
rosa_rugosa	Rorug06G0253400 Rorug06G0253500 Rorug06G0253600
rosa_samantha	Rh6AG367000 Rh6BG374800 Rh6DG367900
rosa_wichuraiana	Rw6G032030

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1442
AccB1I	GGYRCC	1 cut(s)	1280
AccI	GTMKAC	3 cut(s)	137, 764, 1746
AccII	CGCG	1 cut(s)	1936
AciI	CCGC	3 cut(s)	208, 920, 1374
AclWI	GGATC	4 cut(s)	276, 970, 1763, 1948
AcoI	YGGCCR	3 cut(s)	87, 703, 1339
AcuI	CTGAAG	3 cut(s)	1482, 1667, 2042
AfiI	CCNNNNNNNGG	5 cut(s)	860, 1291, 1292, 1666, 2000
AgsI	TTSAA	7 cut(s)	152, 263, 341, 659, 911, 1546, 1836
AjnI	CCWGG	4 cut(s)	213, 853, 1194, 2004
AjuI	GAANNNNNNNTTGG	4 cut(s)	284, 316, 1922, 1954
AleI	CACNNNNGTG	1 cut(s)	585
AloI	GAACNNNNNNTCC	2 cut(s)	1242, 1274
AluBI	AGCT	7 cut(s)	187, 295, 371, 824, 1052, 1421, 2026
AluI	AGCT	7 cut(s)	187, 295, 371, 824, 1052, 1421, 2026
Alw21I	GWGCWC	2 cut(s)	1092, 1423
Alw26I	GTCTC	2 cut(s)	521, 1705
AlwI	GGATC	4 cut(s)	276, 970, 1763, 1948
Ama87I	CYCGRG	4 cut(s)	110, 237, 1291, 1809
AoxI	GGCC	8 cut(s)	87, 703, 856, 1192, 1339, 1351, 1519, 2002
ApeKI	GCWGC	3 cut(s)	917, 1721, 2015
ArsI	GACNNNNNNTTYG	2 cut(s)	604, 636
Asp700I	GAANNNNTTC	2 cut(s)	1203, 2051
AspLEI	GCGC	4 cut(s)	462, 1030, 1370, 1936
AspS9I	GGNCC	5 cut(s)	5, 1192, 1213, 1234, 1520
AsuC2I	CCSGG	2 cut(s)	111, 112
AsuHPI	GGTGA	2 cut(s)	1307, 1625
AsuII	TTCGAA	1 cut(s)	1877
AsuNHI	GCTAGC	1 cut(s)	820
AvaI	CYCGRG	4 cut(s)	110, 237, 1291, 1809
AvaII	GGWCC	3 cut(s)	5, 1213, 1234
AxyI	CCTNAGG	1 cut(s)	1705
BaeGI	GKGCMC	1 cut(s)	1285
BaeI	ACNNNNGTAYC	2 cut(s)	1389, 1422
BalI	TGGCCA	1 cut(s)	1341
BanI	GGYRCC	1 cut(s)	1280
BanII	GRGCYC	1 cut(s)	1423
BarI	GAAGNNNNNNTAC	2 cut(s)	1144, 1176
BauI	CACGAG	1 cut(s)	1497
BbsI	GAAGAC	2 cut(s)	1152, 2067
Bbv12I	GWGCWC	2 cut(s)	1092, 1423
BbvI	GCAGC	3 cut(s)	929, 1708, 2027
BccI	CCATC	4 cut(s)	138, 660, 1076, 1631
BceAI	ACGGC	3 cut(s)	74, 737, 821
BciT130I	CCWGG	4 cut(s)	215, 855, 1196, 2006
BcnI	CCSGG	2 cut(s)	111, 112
BcoDI	GTCTC	2 cut(s)	521, 1705
BfaI	CTAG	7 cut(s)	377, 420, 596, 642, 821, 1118, 1247
BfmI	CTRYAG	3 cut(s)	825, 1404, 2013
BisI	GCNGC	3 cut(s)	918, 1722, 2016
BlsI	GCNGC	3 cut(s)	919, 1723, 2017
Bme1390I	CCNGG	6 cut(s)	111, 112, 215, 855, 1196, 2006
Bme18I	GGWCC	3 cut(s)	5, 1213, 1234
BmeT110I	CYCGRG	4 cut(s)	110, 237, 1291, 1809
BmgT120I	GGNCC	5 cut(s)	5, 1192, 1213, 1234, 1520
BmiI	GGNNCC	8 cut(s)	6, 108, 212, 235, 1193, 1214, 1282, 1983
BmrFI	CCNGG	6 cut(s)	111, 112, 215, 855, 1196, 2006
BmrI	ACTGGG	1 cut(s)	140
BmsI	GCATC	5 cut(s)	391, 497, 712, 1009, 1916
BmtI	GCTAGC	1 cut(s)	824
BmuI	ACTGGG	1 cut(s)	140
BoxI	GACNNNNGTC	1 cut(s)	1052
BpiI	GAAGAC	2 cut(s)	1152, 2067
BplI	GAGNNNNNCTC	2 cut(s)	1685, 1717
BpmI	CTGGAG	1 cut(s)	1977
Bpu14I	TTCGAA	1 cut(s)	1877
BpuEI	CTTGAG	2 cut(s)	1667, 2012
BpuMI	CCSGG	2 cut(s)	111, 112
Bsa29I	ATCGAT	1 cut(s)	1482
BsaBI	GATNNNNATC	1 cut(s)	876
BsaJI	CCNNGG	5 cut(s)	110, 789, 859, 1342, 1985
BsaWI	WCCGGW	1 cut(s)	362
BsaXI	ACNNNNNCTCC	4 cut(s)	1242, 1272, 1494, 1524
Bsc4I	CCNNNNNNNGG	5 cut(s)	860, 1291, 1292, 1666, 2000
Bse118I	RCCGGY	2 cut(s)	1370, 2000
Bse1I	ACTGG	2 cut(s)	146, 784
Bse21I	CCTNAGG	1 cut(s)	1705
Bse3DI	GCAATG	2 cut(s)	440, 469
Bse8I	GATNNNNATC	1 cut(s)	876
BseBI	CCWGG	4 cut(s)	215, 855, 1196, 2006
BseCI	ATCGAT	1 cut(s)	1482
BseDI	CCNNGG	5 cut(s)	110, 789, 859, 1342, 1985
BseGI	GGATG	5 cut(s)	200, 631, 694, 877, 1024
BseJI	GATNNNNATC	1 cut(s)	876
BseLI	CCNNNNNNNGG	5 cut(s)	860, 1291, 1292, 1666, 2000
BseMI	GCAATG	2 cut(s)	440, 469
BseMII	CTCAG	2 cut(s)	1398, 2070
BseNI	ACTGG	2 cut(s)	146, 784
BseRI	GAGGAG	2 cut(s)	407, 515
BseSI	GKGCMC	1 cut(s)	1285
BseXI	GCAGC	3 cut(s)	929, 1708, 2027
Bsh1236I	CGCG	1 cut(s)	1936
BshFI	GGCC	8 cut(s)	89, 705, 858, 1194, 1341, 1353, 1521, 2004
BshNI	GGYRCC	1 cut(s)	1280
BshVI	ATCGAT	1 cut(s)	1482
BsiHKAI	GWGCWC	2 cut(s)	1092, 1423
BsiHKCI	CYCGRG	4 cut(s)	110, 237, 1291, 1809
BsiSI	CCGG	4 cut(s)	111, 363, 1371, 2001
BslFI	GGGAC	4 cut(s)	320, 1040, 1226, 1390
BslI	CCNNNNNNNGG	5 cut(s)	860, 1291, 1292, 1666, 2000
BsmAI	GTCTC	2 cut(s)	521, 1705
BsmFI	GGGAC	4 cut(s)	320, 1040, 1226, 1390
BsmI	GAATGC	1 cut(s)	1936
BsnI	GGCC	8 cut(s)	89, 705, 858, 1194, 1341, 1353, 1521, 2004
BsoBI	CYCGRG	4 cut(s)	110, 237, 1291, 1809
Bsp119I	TTCGAA	1 cut(s)	1877
Bsp1286I	GDGCHC	3 cut(s)	1092, 1285, 1423
Bsp143I	GATC	4 cut(s)	281, 962, 1768, 1953
Bsp19I	CCATGG	1 cut(s)	1985
BspACI	CCGC	3 cut(s)	208, 920, 1374
BspANI	GGCC	8 cut(s)	89, 705, 858, 1194, 1341, 1353, 1521, 2004
BspCNI	CTCAG	2 cut(s)	1397, 2069
BspDI	ATCGAT	1 cut(s)	1482
BspFNI	CGCG	1 cut(s)	1936
BspHI	TCATGA	1 cut(s)	840
BspLI	GGNNCC	8 cut(s)	6, 108, 212, 235, 1193, 1214, 1282, 1983
BspMAI	CTGCAG	1 cut(s)	2017
BspOI	GCTAGC	1 cut(s)	824
BspPI	GGATC	4 cut(s)	276, 970, 1763, 1948
BspT104I	TTCGAA	1 cut(s)	1877
BspT107I	GGYRCC	1 cut(s)	1280
BsrDI	GCAATG	2 cut(s)	440, 469
BsrFI	RCCGGY	2 cut(s)	1370, 2000
BsrI	ACTGG	2 cut(s)	146, 784
BssAI	RCCGGY	2 cut(s)	1370, 2000
BssECI	CCNNGG	5 cut(s)	110, 789, 859, 1342, 1985
BssMI	GATC	4 cut(s)	281, 962, 1768, 1953
BssNAI	GTATAC	2 cut(s)	138, 765
BssSI	CACGAG	1 cut(s)	1497
BssT1I	CCWWGG	4 cut(s)	789, 859, 1342, 1985
Bst1107I	GTATAC	2 cut(s)	138, 765
Bst2BI	CACGAG	1 cut(s)	1497
Bst2UI	CCWGG	4 cut(s)	215, 855, 1196, 2006
Bst4CI	ACNGT	9 cut(s)	169, 472, 544, 604, 1042, 1073, 1661, 1787, 1819
Bst6I	CTCTTC	2 cut(s)	420, 741
BstAPI	GCANNNNNTGC	4 cut(s)	248, 410, 749, 1931
BstBI	TTCGAA	1 cut(s)	1877
BstC8I	GCNNGC	5 cut(s)	822, 1032, 1372, 1764, 1905
BstDEI	CTNAG	3 cut(s)	1384, 1705, 2056
BstDSI	CCRYGG	1 cut(s)	1985
BstF5I	GGATG	5 cut(s)	200, 631, 694, 877, 1024
BstFNI	CGCG	1 cut(s)	1936
BstHHI	GCGC	4 cut(s)	462, 1030, 1370, 1936
BstKTI	GATC	4 cut(s)	284, 965, 1771, 1956
BstMAI	GTCTC	2 cut(s)	521, 1705
BstMBI	GATC	4 cut(s)	281, 962, 1768, 1953
BstMWI	GCNNNNNNNGC	7 cut(s)	193, 248, 410, 749, 864, 1058, 1931
BstNI	CCWGG	4 cut(s)	215, 855, 1196, 2006
BstNSI	RCATGY	1 cut(s)	812
BstPAI	GACNNNNGTC	1 cut(s)	1052
BstSCI	CCNGG	6 cut(s)	109, 110, 213, 853, 1194, 2004
BstSFI	CTRYAG	3 cut(s)	825, 1404, 2013
BstSLI	GKGCMC	1 cut(s)	1285
BstUI	CGCG	1 cut(s)	1936
BstV1I	GCAGC	3 cut(s)	929, 1708, 2027
BstV2I	GAAGAC	2 cut(s)	1152, 2067
BstX2I	RGATCY	3 cut(s)	281, 962, 1953
BstXI	CCANNNNNNTGG	1 cut(s)	1349
BstYI	RGATCY	3 cut(s)	281, 962, 1953
BstZ17I	GTATAC	2 cut(s)	138, 765
Bsu15I	ATCGAT	1 cut(s)	1482
Bsu36I	CCTNAGG	1 cut(s)	1705
BsuRI	GGCC	8 cut(s)	89, 705, 858, 1194, 1341, 1353, 1521, 2004
BsuTUI	ATCGAT	1 cut(s)	1482
BtgI	CCRYGG	1 cut(s)	1985
BtsCI	GGATG	5 cut(s)	200, 631, 694, 877, 1024
BtsI	GCAGTG	1 cut(s)	2010
BtsIMutI	CAGTG	5 cut(s)	468, 777, 1356, 1824, 2010
Cac8I	GCNNGC	5 cut(s)	822, 1032, 1372, 1764, 1905
CciI	TCATGA	1 cut(s)	840
CfoI	GCGC	4 cut(s)	462, 1030, 1370, 1936
Cfr10I	RCCGGY	2 cut(s)	1370, 2000
Cfr13I	GGNCC	5 cut(s)	5, 1192, 1213, 1234, 1520
Cfr9I	CCCGGG	1 cut(s)	110
ClaI	ATCGAT	1 cut(s)	1482
CviAII	CATG	8 cut(s)	809, 841, 931, 1256, 1631, 1688, 1756, 1986
DdeI	CTNAG	3 cut(s)	1384, 1705, 2056
DpnI	GATC	4 cut(s)	283, 964, 1770, 1955
DpnII	GATC	4 cut(s)	281, 962, 1768, 1953
EaeI	YGGCCR	3 cut(s)	87, 703, 1339
Eam1104I	CTCTTC	2 cut(s)	420, 741
EarI	CTCTTC	2 cut(s)	420, 741
Ecl136II	GAGCTC	1 cut(s)	1421
Eco130I	CCWWGG	4 cut(s)	789, 859, 1342, 1985
Eco24I	GRGCYC	1 cut(s)	1423
Eco32I	GATATC	1 cut(s)	1472
Eco47I	GGWCC	3 cut(s)	5, 1213, 1234
Eco53kI	GAGCTC	1 cut(s)	1421
Eco57I	CTGAAG	3 cut(s)	1482, 1667, 2042
Eco81I	CCTNAGG	1 cut(s)	1705
Eco88I	CYCGRG	4 cut(s)	110, 237, 1291, 1809
EcoICRI	GAGCTC	1 cut(s)	1421
EcoO109I	RGGNCCY	3 cut(s)	5, 1192, 1213
EcoRII	CCWGG	4 cut(s)	213, 853, 1194, 2004
EcoRV	GATATC	1 cut(s)	1472
EcoT14I	CCWWGG	4 cut(s)	789, 859, 1342, 1985
EcoT38I	GRGCYC	1 cut(s)	1423
ErhI	CCWWGG	4 cut(s)	789, 859, 1342, 1985
FaeI	CATG	8 cut(s)	812, 844, 934, 1259, 1634, 1691, 1759, 1989
FalI	AAGNNNNNCTT	2 cut(s)	1896, 1928
FaqI	GGGAC	4 cut(s)	320, 1040, 1226, 1390
FatI	CATG	8 cut(s)	808, 840, 930, 1255, 1630, 1687, 1755, 1985
FauI	CCCGC	1 cut(s)	1367
FauNDI	CATATG	3 cut(s)	325, 617, 1144
FblI	GTMKAC	3 cut(s)	137, 764, 1746
Fnu4HI	GCNGC	3 cut(s)	918, 1722, 2016
FokI	GGATG	5 cut(s)	187, 638, 701, 884, 1031
FriOI	GRGCYC	1 cut(s)	1423
Fsp4HI	GCNGC	3 cut(s)	918, 1722, 2016
FspBI	CTAG	7 cut(s)	377, 420, 596, 642, 821, 1118, 1247
GlaI	GCGC	4 cut(s)	461, 1029, 1369, 1935
GluI	GCNGC	3 cut(s)	918, 1722, 2016
GsuI	CTGGAG	1 cut(s)	1977
HaeIII	GGCC	8 cut(s)	89, 705, 858, 1194, 1341, 1353, 1521, 2004
HapII	CCGG	4 cut(s)	111, 363, 1371, 2001
HhaI	GCGC	4 cut(s)	462, 1030, 1370, 1936
Hin1II	CATG	8 cut(s)	812, 844, 934, 1259, 1634, 1691, 1759, 1989
Hin6I	GCGC	4 cut(s)	460, 1028, 1368, 1934
HinP1I	GCGC	4 cut(s)	460, 1028, 1368, 1934
HincII	GTYRAC	1 cut(s)	1747
HindII	GTYRAC	1 cut(s)	1747
HindIII	AAGCTT	1 cut(s)	293
HinfI	GANTC	7 cut(s)	612, 634, 1308, 1568, 1812, 1845, 1990
HpaII	CCGG	4 cut(s)	111, 363, 1371, 2001
HphI	GGTGA	2 cut(s)	1307, 1625
Hpy166II	GTNNAC	5 cut(s)	138, 590, 765, 1115, 1747
Hpy188I	TCNGA	7 cut(s)	57, 125, 1387, 1476, 1885, 1981, 2059
Hpy8I	GTNNAC	5 cut(s)	138, 590, 765, 1115, 1747
Hpy99I	CGWCG	1 cut(s)	1748
HpyAV	CCTTC	9 cut(s)	236, 295, 1226, 1436, 1457, 1582, 1660, 1750, 2041
HpyCH4III	ACNGT	9 cut(s)	169, 472, 544, 604, 1042, 1073, 1661, 1787, 1819
HpyCH4IV	ACGT	1 cut(s)	927
HpyF10VI	GCNNNNNNNGC	7 cut(s)	193, 248, 410, 749, 864, 1058, 1931
HpyF3I	CTNAG	3 cut(s)	1384, 1705, 2056
HpySE526I	ACGT	1 cut(s)	927
Hsp92II	CATG	8 cut(s)	812, 844, 934, 1259, 1634, 1691, 1759, 1989
HspAI	GCGC	4 cut(s)	460, 1028, 1368, 1934
KroI	GCCGGC	1 cut(s)	1370
KroNI	GCCGGC	1 cut(s)	1372
Kzo9I	GATC	4 cut(s)	281, 962, 1768, 1953
LmnI	GCTCC	2 cut(s)	1418, 1426
Lsp1109I	GCAGC	3 cut(s)	929, 1708, 2027
LweI	GCATC	5 cut(s)	391, 497, 712, 1009, 1916
MaeI	CTAG	7 cut(s)	377, 420, 596, 642, 821, 1118, 1247
MaeII	ACGT	1 cut(s)	927
MalI	GATC	4 cut(s)	283, 964, 1770, 1955
MboI	GATC	4 cut(s)	281, 962, 1768, 1953
MboII	GAAGA	9 cut(s)	76, 291, 437, 728, 881, 1152, 1565, 1835, 2072
MfeI	CAATTG	1 cut(s)	1335
MflI	RGATCY	3 cut(s)	281, 962, 1953
MhlI	GDGCHC	3 cut(s)	1092, 1285, 1423
MlsI	TGGCCA	1 cut(s)	1341
MluCI	AATT	5 cut(s)	911, 1062, 1335, 1449, 1653
MluNI	TGGCCA	1 cut(s)	1341
MlyI	GAGTC	3 cut(s)	1577, 1821, 1984
MmeI	TCCRAC	2 cut(s)	922, 1396
Mox20I	TGGCCA	1 cut(s)	1341
MreI	CGCCGGCG	1 cut(s)	1370
MroNI	GCCGGC	1 cut(s)	1370
MroXI	GAANNNNTTC	2 cut(s)	1203, 2051
MscI	TGGCCA	1 cut(s)	1341
MseI	TTAA	1 cut(s)	1448
MslI	CAYNNNNRTG	3 cut(s)	585, 813, 1635
Msp20I	TGGCCA	1 cut(s)	1341
MspA1I	CMGCKG	2 cut(s)	920, 1052
MspI	CCGG	4 cut(s)	111, 363, 1371, 2001
MspR9I	CCNGG	6 cut(s)	111, 112, 215, 855, 1196, 2006
MunI	CAATTG	1 cut(s)	1335
Mva1269I	GAATGC	1 cut(s)	1936
MvaI	CCWGG	4 cut(s)	215, 855, 1196, 2006
MvnI	CGCG	1 cut(s)	1936
MwoI	GCNNNNNNNGC	7 cut(s)	193, 248, 410, 749, 864, 1058, 1931
NaeI	GCCGGC	1 cut(s)	1372
NciI	CCSGG	2 cut(s)	111, 112
NcoI	CCATGG	1 cut(s)	1985
NdeI	CATATG	3 cut(s)	325, 617, 1144
NdeII	GATC	4 cut(s)	281, 962, 1768, 1953
NgoMIV	GCCGGC	1 cut(s)	1370
NheI	GCTAGC	1 cut(s)	820
NlaIII	CATG	8 cut(s)	812, 844, 934, 1259, 1634, 1691, 1759, 1989
NlaIV	GGNNCC	8 cut(s)	6, 108, 212, 235, 1193, 1214, 1282, 1983
NmeAIII	GCCGAG	1 cut(s)	731
NmuCI	GTSAC	5 cut(s)	466, 512, 1613, 1813, 2008
NspI	RCATGY	1 cut(s)	812
NspV	TTCGAA	1 cut(s)	1877
OliI	CACNNNNGTG	1 cut(s)	585
PaeR7I	CTCGAG	1 cut(s)	1809
PagI	TCATGA	1 cut(s)	840
PcsI	WCGNNNNNNNCGW	1 cut(s)	68
PctI	GAATGC	1 cut(s)	1936
PdiI	GCCGGC	1 cut(s)	1372
PdmI	GAANNNNTTC	2 cut(s)	1203, 2051
PfeI	GAWTC	4 cut(s)	612, 634, 1308, 1845
PfoI	TCCNGGA	1 cut(s)	213
PkrI	GCNGC	3 cut(s)	919, 1723, 2017
PleI	GAGTC	3 cut(s)	1576, 1820, 1984
PpsI	GAGTC	3 cut(s)	1576, 1820, 1984
PpuMI	RGGWCCY	2 cut(s)	5, 1213
PshAI	GACNNNNGTC	1 cut(s)	1052
PsiI	TTATAA	1 cut(s)	1442
Psp124BI	GAGCTC	1 cut(s)	1423
Psp5II	RGGWCCY	2 cut(s)	5, 1213
Psp6I	CCWGG	4 cut(s)	213, 853, 1194, 2004
PspGI	CCWGG	4 cut(s)	213, 853, 1194, 2004
PspN4I	GGNNCC	8 cut(s)	6, 108, 212, 235, 1193, 1214, 1282, 1983
PspPI	GGNCC	5 cut(s)	5, 1192, 1213, 1234, 1520
PspPPI	RGGWCCY	2 cut(s)	5, 1213
PstI	CTGCAG	1 cut(s)	2017
PsuI	RGATCY	3 cut(s)	281, 962, 1953
PvuII	CAGCTG	1 cut(s)	1052
RseI	CAYNNNNRTG	3 cut(s)	585, 813, 1635
SacI	GAGCTC	1 cut(s)	1423
SalI	GTCGAC	1 cut(s)	1745
SaqAI	TTAA	1 cut(s)	1448
SatI	GCNGC	3 cut(s)	918, 1722, 2016
Sau3AI	GATC	4 cut(s)	281, 962, 1768, 1953
Sau96I	GGNCC	5 cut(s)	5, 1192, 1213, 1234, 1520
SchI	GAGTC	3 cut(s)	1577, 1821, 1984
ScrFI	CCNGG	6 cut(s)	111, 112, 215, 855, 1196, 2006
SduI	GDGCHC	3 cut(s)	1092, 1285, 1423
SfaNI	GCATC	5 cut(s)	391, 497, 712, 1009, 1916
SfcI	CTRYAG	3 cut(s)	825, 1404, 2013
Sfr274I	CTCGAG	1 cut(s)	1809
SfuI	TTCGAA	1 cut(s)	1877
SgrAI	CRCCGGYG	1 cut(s)	1370
SinI	GGWCC	3 cut(s)	5, 1213, 1234
SlaI	CTCGAG	1 cut(s)	1809
SmaI	CCCGGG	1 cut(s)	112
SmiMI	CAYNNNNRTG	3 cut(s)	585, 813, 1635
SmlI	CTYRAG	3 cut(s)	1646, 1809, 2027
SmoI	CTYRAG	3 cut(s)	1646, 1809, 2027
Sse9I	AATT	5 cut(s)	911, 1062, 1335, 1449, 1653
SsiI	CCGC	3 cut(s)	208, 920, 1374
SspMI	CTAG	7 cut(s)	377, 420, 596, 642, 821, 1118, 1247
SstI	GAGCTC	1 cut(s)	1423
StyD4I	CCNGG	6 cut(s)	109, 110, 213, 853, 1194, 2004
StyI	CCWWGG	4 cut(s)	789, 859, 1342, 1985
TaaI	ACNGT	9 cut(s)	169, 472, 544, 604, 1042, 1073, 1661, 1787, 1819
TaiI	ACGT	1 cut(s)	930
TasI	AATT	5 cut(s)	911, 1062, 1335, 1449, 1653
TfiI	GAWTC	4 cut(s)	612, 634, 1308, 1845
Tru1I	TTAA	1 cut(s)	1448
Tru9I	TTAA	1 cut(s)	1448
TscAI	CASTG	5 cut(s)	475, 784, 1363, 1824, 2017
TseFI	GTSAC	5 cut(s)	466, 512, 1613, 1813, 2008
TseI	GCWGC	3 cut(s)	917, 1721, 2015
Tsp45I	GTSAC	5 cut(s)	466, 512, 1613, 1813, 2008
TspDTI	ATGAA	6 cut(s)	287, 669, 1300, 1566, 1619, 1766
TspGWI	ACGGA	3 cut(s)	291, 627, 1226
TspMI	CCCGGG	1 cut(s)	110
TspRI	CASTG	5 cut(s)	475, 784, 1363, 1824, 2017
VpaK11BI	GGWCC	3 cut(s)	5, 1213, 1234
XceI	RCATGY	1 cut(s)	812
XhoI	CTCGAG	1 cut(s)	1809
XmaI	CCCGGG	1 cut(s)	110
XmiI	GTMKAC	3 cut(s)	137, 764, 1746
XmnI	GAANNNNTTC	2 cut(s)	1203, 2051
XspI	CTAG	7 cut(s)	377, 420, 596, 642, 821, 1118, 1247

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.