Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000007

Orthogroup ID

OG0009812

Physical Location & Seq

Genomic Coordinates Reverse (-)

12469729 .. 12475625

Gene Structure 5897 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_7G00172200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1941 bp

ATGGTTCCCACCTATGTTGTTGGTGCCCTTGTTCCGCTTTTGTTAACTCTTTTACTTCACAAGTCCAAGAAGGAACCCAAACGGGGTTTGCTCGTTGATGTTGGTGGGGAACCTGGCTATGCAGTCCGGAACCATCATTCTGCTTCCCCCGTGGAGTCAGCTTGGGAAGGGATTTCAACTCTTGCTCAACTTTTTGAGCAGTCGTGCAAGCGATTCCAAAATAAATGCTTTCTTGGGACCCGGACATTGGTGGCAAGGGAGCTTGAAGTTACAAAGGATGGGAGATCCTTTGAGAAGCTTCATTTGGGAGACTATCAGTGGCTAACTTATGGGAAGGCATTTGAAGTTGTGTCCAACTTTGCTTCTGGTTTGAGTCAGCTTGGACATAAAAGGGAAGAACGAGTAGCAATCTTTGCTGACACTAGAGAAGAGTGGTTCCTTGCATTGCAGACAGAAGTTACAACTGTGATTTGTGGGCACAAAGAACTGGAGAAACTTGTAGCCATAAGTGGGCAACTTGACACAGTGAACCGCATCATATGTATGGATGATGATATCCCATCTAGTGCTTCGTCTGTTGATAGCAGGTGGAGAATCACTTCATTTGCGGATGTTGAGAAACTTGGACGAGAAAACCCTGTTGACCCTGAATTACCTCTTCCTGCAGATATTGCGGTCATTATGTATACAAGTGGAAGTACAGGATTGCCCAAGGGTGTAATGATGACACATGCTAATGTCCTAGCTGTTACTTCTGCTGTCATGACCATTGTCCCTGGTATTGGAACCGAGGATATCTATATGGCATATCTCCCCCTTGCTCATATCCTGGAATTAGCAGCAGAGAATGTCATGGTTGCTGCTGGAAGTGCTATAGGGTATGGATCTCCTTTGACTCTTACAGATACGTCAAGTAAAATAAAAAAGGGAACAAAGGGGGATGCAACTGTGCTTTTGCCAACTTTATTGACAGCTGTTCCTGCAATTCTTGATCGTGTTCGAGATGGGGTACTCAATAAGGTCCGTGCAATTCTAGGAGGTCGCATCCGTTACATGCTATCTGGTGGTGCTCCTCTTTCTGGTGATACTCAAAGATTCATCAACATTTGCATTGGTACTTCAATTGGTCAAGGGTATGGTCTCACAGAAACTTGCGCTGGTGGAACATTCTCAGAGTTTGGTGATACCTCTGTTGGTCGCGTTGGAGCTCCACTTCCCTGTTCATTTATCAAGTTAATTGATTGGCCTGAGGGAGGATATCTGATTAGTGATTCCCCAATGCCTCGTGGAGAGATAGTCATTGGTGGTCCAAATGTTACAGTCGGTTATTTCAAAAATGAAGAAAAAACGAACGAATCTTACAAGGTTGACGAGAGAGGAATGAGGTGGTTCTATACAGGTGACATAGGGCAAATTCATGCCGATGGTTGCCTTGAGATAATTGACCGTAGGAAAGATATAGTTAAGCTTCAACATGGGGAGTATGTCTCCCTAGGAAAGGTACCAGTTTTCGAAAATGCAACTCTTCATTGCATTCCTTCTTCAGTGACTGATATTTCCTTTTTACAGGTTGAGGCTGCTCTTTCAGTGTGCCGCTATATTGACAATATCATGGTGCATGCTGATCCTTTTCATAGTTACTGTGTGGCTCTCGTGGTCGCTTCTCGAACCACACTGGAAGATTGGGCTGCAAAGCAAGGAATTACTTTTAGTGAGTTTTCAGACTTGTGTGAGAAAGAAGAAACCAGAAAAGAAGTGCAATCATCACTGTTAAAGGAAGCAAAGAAGGCGCGTTTGCAGAAGTTTGAGATCCCTGCAAAAATCAAATTGCTTTTTGAGCCATGGACTCCTGAAAGTGGCCTGGTCACCTCGGCTCTCAAGCTCAAAAGAGATATCATTCGGAAGGCTTTCTCTGAAGACCTCTCCAAGTTATACGCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001676 GO:0003674 GO:0003824 GO:0004467 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006082 GO:0006629 GO:0006631 GO:0008150 GO:0008152 GO:0009507 GO:0009526 GO:0009536 GO:0009941 GO:0009987 GO:0015645 GO:0016020 GO:0016405 GO:0016874 GO:0016877 GO:0016878 GO:0019752 GO:0031967 GO:0031975 GO:0032787 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0044237 GO:0044238 GO:0044255 GO:0044281 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0071704

KEGG Pathways

Metabolic & Signaling

ko00061 ko00071 ko01100 ko01212 ko02024 ko03320 ko04146 ko04216 ko04714 ko04920 map00061 map00071 map01100 map01212 map02024 map03320 map04146 map04216 map04714 map04920

Pfam Domains

Protein Families

AMP-binding

Protein Analysis

646

Amino Acids

70.72

Weight (kDa)

5.99

Isoelectric Point (pI)

36.29

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
AMP-binding	PF00501	101 - 149	6.4e-09	AMP-binding enzyme
AMP-binding	PF00501	150 - 444	2.7e-55	AMP-binding enzyme

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0009812)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G77590 AT1G77590
fragaria_vesca	FvH4_2g26850
malus_domestica	MD08G1163100.v1.1 MD15G1349800.v1.1
prunus_persica	Prupe.1G499000_v2.0.a1 Prupe.1G499000_v2.0.a1
pyrus_communis	pycom08g14100 pycom15g31290
rosa_chinensis	RchiOBHm_Chr6g0295701
rosa_laevigata	RLG00000011774
rosa_multiflora	Rmu_sc0007372.1_g000004 Rmu_sc0007986.1_g000001
rosa_roxburghii	Rroxscaffold_7G00172200
rosa_rugosa	Rorug06G0253400 Rorug06G0253500 Rorug06G0253600
rosa_samantha	Rh6AG367000 Rh6BG374800 Rh6DG367900
rosa_wichuraiana	Rw6G032030

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	576
Acc36I	ACCTGC	1 cut(s)	576
Acc65I	GGTACC	1 cut(s)	1501
AccB1I	GGYRCC	2 cut(s)	23, 1501
AccI	GTMKAC	1 cut(s)	686
AccII	CGCG	2 cut(s)	1200, 1792
AccIII	TCCGGA	1 cut(s)	126
AciI	CCGC	5 cut(s)	35, 532, 608, 674, 1594
AclWI	GGATC	4 cut(s)	279, 892, 1619, 1804
AcsI	RAATTY	1 cut(s)	1413
AcuI	CTGAAG	2 cut(s)	1527, 1935
AfaI	GTAC	4 cut(s)	700, 1011, 1117, 1503
AfiI	CCNNNNNNNGG	8 cut(s)	83, 247, 510, 782, 1079, 1253, 1498, 1856
AgsI	TTSAA	6 cut(s)	177, 266, 344, 1122, 1333, 1472
AjnI	CCWGG	4 cut(s)	112, 775, 828, 1860
AjuI	GAANNNNNNNTTGG	2 cut(s)	287, 319
AluBI	AGCT	9 cut(s)	161, 262, 298, 379, 746, 974, 1208, 1468, 1882
AluI	AGCT	9 cut(s)	161, 262, 298, 379, 746, 974, 1208, 1468, 1882
Alw21I	GWGCWC	2 cut(s)	1072, 1210
Alw26I	GTCTC	3 cut(s)	303, 1145, 1492
AlwI	GGATC	4 cut(s)	279, 892, 1619, 1804
AlwNI	CAGNNNCTG	1 cut(s)	1550
Aor13HI	TCCGGA	1 cut(s)	126
AoxI	GGCC	2 cut(s)	1244, 1858
ApeKI	GCWGC	4 cut(s)	839, 860, 1577, 1688
ApoI	RAATTY	1 cut(s)	1413
Asp700I	GAANNNNTTC	2 cut(s)	598, 1907
Asp718I	GGTACC	1 cut(s)	1501
AspA2I	CCTAGG	1 cut(s)	1492
AspLEI	GCGC	2 cut(s)	1157, 1792
AspS9I	GGNCC	3 cut(s)	237, 1021, 1307
AsuC2I	CCSGG	1 cut(s)	241
AsuHPI	GGTGA	4 cut(s)	1094, 1193, 1412, 1858
AsuII	TTCGAA	1 cut(s)	1512
AvaII	GGWCC	3 cut(s)	237, 1021, 1307
AvrII	CCTAGG	1 cut(s)	1492
AxyI	CCTNAGG	1 cut(s)	1248
BaeGI	GKGCMC	2 cut(s)	28, 480
BaeI	ACNNNNGTAYC	2 cut(s)	1176, 1209
BanI	GGYRCC	2 cut(s)	23, 1501
BanII	GRGCYC	1 cut(s)	1210
BauI	CACGAG	2 cut(s)	1284, 1652
BbsI	GAAGAC	1 cut(s)	1923
Bbv12I	GWGCWC	2 cut(s)	1072, 1210
BbvI	GCAGC	4 cut(s)	847, 851, 1564, 1675
BccI	CCATC	5 cut(s)	141, 272, 568, 998, 1418
BciT130I	CCWGG	4 cut(s)	114, 777, 830, 1862
BcnI	CCSGG	1 cut(s)	241
BcoDI	GTCTC	3 cut(s)	303, 1145, 1492
BfaI	CTAG	5 cut(s)	423, 564, 743, 1034, 1493
BfmI	CTRYAG	2 cut(s)	663, 873
BfuAI	ACCTGC	1 cut(s)	576
BisI	GCNGC	5 cut(s)	840, 861, 1578, 1594, 1689
BlnI	CCTAGG	1 cut(s)	1492
BlsI	GCNGC	5 cut(s)	841, 862, 1579, 1595, 1690
Bme1390I	CCNGG	5 cut(s)	114, 241, 777, 830, 1862
Bme18I	GGWCC	3 cut(s)	237, 1021, 1307
BmgT120I	GGNCC	3 cut(s)	237, 1021, 1307
BmrFI	CCNGG	5 cut(s)	114, 241, 777, 830, 1862
BmsI	GCATC	3 cut(s)	543, 931, 1053
BoxI	GACNNNNGTC	1 cut(s)	770
BpiI	GAAGAC	1 cut(s)	1923
BplI	GAGNNNNNCTC	2 cut(s)	1472, 1504
BpmI	CTGGAG	1 cut(s)	509
Bpu14I	TTCGAA	1 cut(s)	1512
BpuEI	CTTGAG	2 cut(s)	1454, 1862
BpuMI	CCSGG	1 cut(s)	241
BsaI	GGTCTC	1 cut(s)	1145
BsaJI	CCNNGG	7 cut(s)	150, 711, 775, 789, 1492, 1841, 1869
BsaWI	WCCGGW	1 cut(s)	126
BsaXI	ACNNNNNCTCC	2 cut(s)	1281, 1311
Bsc4I	CCNNNNNNNGG	8 cut(s)	83, 247, 510, 782, 1079, 1253, 1498, 1856
Bse1I	ACTGG	3 cut(s)	492, 1505, 1680
Bse21I	CCTNAGG	1 cut(s)	1248
Bse3DI	GCAATG	2 cut(s)	443, 1528
BseAI	TCCGGA	1 cut(s)	126
BseBI	CCWGG	4 cut(s)	114, 777, 830, 1862
BseDI	CCNNGG	7 cut(s)	150, 711, 775, 789, 1492, 1841, 1869
BseGI	GGATG	5 cut(s)	283, 553, 616, 946, 1044
BseLI	CCNNNNNNNGG	8 cut(s)	83, 247, 510, 782, 1079, 1253, 1498, 1856
BseMI	GCAATG	2 cut(s)	443, 1528
BseMII	CTCAG	2 cut(s)	1185, 1239
BseNI	ACTGG	3 cut(s)	492, 1505, 1680
BseRI	GAGGAG	1 cut(s)	1062
BseSI	GKGCMC	2 cut(s)	28, 480
BseXI	GCAGC	4 cut(s)	847, 851, 1564, 1675
Bsh1236I	CGCG	2 cut(s)	1200, 1792
BshFI	GGCC	2 cut(s)	1246, 1860
BshNI	GGYRCC	2 cut(s)	23, 1501
BsiHKAI	GWGCWC	2 cut(s)	1072, 1210
BsiSI	CCGG	2 cut(s)	127, 241
BslFI	GGGAC	2 cut(s)	250, 758
BslI	CCNNNNNNNGG	8 cut(s)	83, 247, 510, 782, 1079, 1253, 1498, 1856
BsmAI	GTCTC	3 cut(s)	303, 1145, 1492
BsmFI	GGGAC	2 cut(s)	250, 758
BsmI	GAATGC	1 cut(s)	1533
BsnI	GGCC	2 cut(s)	1246, 1860
Bso31I	GGTCTC	1 cut(s)	1145
Bsp119I	TTCGAA	1 cut(s)	1512
Bsp1286I	GDGCHC	4 cut(s)	28, 480, 1072, 1210
Bsp13I	TCCGGA	1 cut(s)	126
Bsp143I	GATC	5 cut(s)	284, 884, 991, 1624, 1809
Bsp19I	CCATGG	1 cut(s)	1841
BspACI	CCGC	5 cut(s)	35, 532, 608, 674, 1594
BspANI	GGCC	2 cut(s)	1246, 1860
BspCNI	CTCAG	2 cut(s)	1184, 1240
BspEI	TCCGGA	1 cut(s)	126
BspFNI	CGCG	2 cut(s)	1200, 1792
BspHI	TCATGA	1 cut(s)	762
BspMAI	CTGCAG	1 cut(s)	667
BspMI	ACCTGC	1 cut(s)	576
BspPI	GGATC	4 cut(s)	279, 892, 1619, 1804
BspT104I	TTCGAA	1 cut(s)	1512
BspT107I	GGYRCC	2 cut(s)	23, 1501
BspTNI	GGTCTC	1 cut(s)	1145
BsrDI	GCAATG	2 cut(s)	443, 1528
BsrI	ACTGG	3 cut(s)	492, 1505, 1680
BssECI	CCNNGG	7 cut(s)	150, 711, 775, 789, 1492, 1841, 1869
BssMI	GATC	5 cut(s)	284, 884, 991, 1624, 1809
BssNAI	GTATAC	1 cut(s)	687
BssSI	CACGAG	2 cut(s)	1284, 1652
BssT1I	CCWWGG	3 cut(s)	711, 1492, 1841
Bst1107I	GTATAC	1 cut(s)	687
Bst2BI	CACGAG	2 cut(s)	1284, 1652
Bst2UI	CCWGG	4 cut(s)	114, 777, 830, 1862
Bst4CI	ACNGT	7 cut(s)	466, 526, 949, 1321, 1448, 1643, 1770
Bst6I	CTCTTC	3 cut(s)	423, 663, 1530
BstAPI	GCANNNNNTGC	2 cut(s)	413, 671
BstBI	TTCGAA	1 cut(s)	1512
BstC8I	GCNNGC	2 cut(s)	209, 1620
BstDEI	CTNAG	2 cut(s)	1171, 1248
BstDSI	CCRYGG	2 cut(s)	150, 1841
BstEII	GGTNACC	1 cut(s)	1864
BstENI	CCTNNNNNAGG	2 cut(s)	1251, 1496
BstF5I	GGATG	5 cut(s)	283, 553, 616, 946, 1044
BstFNI	CGCG	2 cut(s)	1200, 1792
BstHHI	GCGC	2 cut(s)	1157, 1792
BstKTI	GATC	5 cut(s)	287, 887, 994, 1627, 1812
BstMAI	GTCTC	3 cut(s)	303, 1145, 1492
BstMBI	GATC	5 cut(s)	284, 884, 991, 1624, 1809
BstMWI	GCNNNNNNNGC	6 cut(s)	413, 671, 869, 980, 1787, 1837
BstNI	CCWGG	4 cut(s)	114, 777, 830, 1862
BstNSI	RCATGY	3 cut(s)	734, 1057, 1622
BstPAI	GACNNNNGTC	1 cut(s)	770
BstPI	GGTNACC	1 cut(s)	1864
BstSCI	CCNGG	5 cut(s)	112, 239, 775, 828, 1860
BstSFI	CTRYAG	2 cut(s)	663, 873
BstSLI	GKGCMC	2 cut(s)	28, 480
BstUI	CGCG	2 cut(s)	1200, 1792
BstV1I	GCAGC	4 cut(s)	847, 851, 1564, 1675
BstV2I	GAAGAC	1 cut(s)	1923
BstX2I	RGATCY	3 cut(s)	284, 884, 1809
BstYI	RGATCY	3 cut(s)	284, 884, 1809
BstZ17I	GTATAC	1 cut(s)	687
Bsu36I	CCTNAGG	1 cut(s)	1248
BsuRI	GGCC	2 cut(s)	1246, 1860
BtgI	CCRYGG	2 cut(s)	150, 1841
BtsCI	GGATG	5 cut(s)	283, 553, 616, 946, 1044
BtsIMutI	CAGTG	6 cut(s)	323, 531, 1551, 1593, 1673, 1766
BveI	ACCTGC	1 cut(s)	576
Cac8I	GCNNGC	2 cut(s)	209, 1620
CaiI	CAGNNNCTG	1 cut(s)	1550
CciI	TCATGA	1 cut(s)	762
CfoI	GCGC	2 cut(s)	1157, 1792
Cfr13I	GGNCC	3 cut(s)	237, 1021, 1307
Csp6I	GTAC	4 cut(s)	699, 1010, 1116, 1502
CspCI	CAANNNNNGTGG	1 cut(s)	33
CviAII	CATG	9 cut(s)	731, 763, 853, 1054, 1418, 1475, 1612, 1619, 1842
CviQI	GTAC	4 cut(s)	699, 1010, 1116, 1502
DdeI	CTNAG	2 cut(s)	1171, 1248
DpnI	GATC	5 cut(s)	286, 886, 993, 1626, 1811
DpnII	GATC	5 cut(s)	284, 884, 991, 1624, 1809
Eam1104I	CTCTTC	3 cut(s)	423, 663, 1530
EarI	CTCTTC	3 cut(s)	423, 663, 1530
Ecl136II	GAGCTC	1 cut(s)	1208
Eco130I	CCWWGG	3 cut(s)	711, 1492, 1841
Eco24I	GRGCYC	1 cut(s)	1210
Eco31I	GGTCTC	1 cut(s)	1145
Eco32I	GATATC	4 cut(s)	556, 796, 1259, 1894
Eco47I	GGWCC	3 cut(s)	237, 1021, 1307
Eco53kI	GAGCTC	1 cut(s)	1208
Eco57I	CTGAAG	2 cut(s)	1527, 1935
Eco81I	CCTNAGG	1 cut(s)	1248
Eco91I	GGTNACC	1 cut(s)	1864
EcoICRI	GAGCTC	1 cut(s)	1208
EcoNI	CCTNNNNNAGG	2 cut(s)	1251, 1496
EcoO109I	RGGNCCY	1 cut(s)	237
EcoO65I	GGTNACC	1 cut(s)	1864
EcoRII	CCWGG	4 cut(s)	112, 775, 828, 1860
EcoRV	GATATC	4 cut(s)	556, 796, 1259, 1894
EcoT14I	CCWWGG	3 cut(s)	711, 1492, 1841
EcoT38I	GRGCYC	1 cut(s)	1210
ErhI	CCWWGG	3 cut(s)	711, 1492, 1841
FaeI	CATG	9 cut(s)	734, 766, 856, 1057, 1421, 1478, 1615, 1622, 1845
FaqI	GGGAC	2 cut(s)	250, 758
FatI	CATG	9 cut(s)	730, 762, 852, 1053, 1417, 1474, 1611, 1618, 1841
FauNDI	CATATG	1 cut(s)	539
FblI	GTMKAC	1 cut(s)	686
Fnu4HI	GCNGC	5 cut(s)	840, 861, 1578, 1594, 1689
FokI	GGATG	5 cut(s)	290, 560, 623, 953, 1031
FriOI	GRGCYC	1 cut(s)	1210
Fsp4HI	GCNGC	5 cut(s)	840, 861, 1578, 1594, 1689
FspBI	CTAG	5 cut(s)	423, 564, 743, 1034, 1493
GlaI	GCGC	2 cut(s)	1156, 1791
GluI	GCNGC	5 cut(s)	840, 861, 1578, 1594, 1689
GsuI	CTGGAG	1 cut(s)	509
HaeIII	GGCC	2 cut(s)	1246, 1860
HapII	CCGG	2 cut(s)	127, 241
HhaI	GCGC	2 cut(s)	1157, 1792
Hin1II	CATG	9 cut(s)	734, 766, 856, 1057, 1421, 1478, 1615, 1622, 1845
Hin6I	GCGC	2 cut(s)	1155, 1790
HinP1I	GCGC	2 cut(s)	1155, 1790
HincII	GTYRAC	3 cut(s)	45, 643, 1369
HindII	GTYRAC	3 cut(s)	45, 643, 1369
HindIII	AAGCTT	2 cut(s)	296, 1466
HinfI	GANTC	9 cut(s)	155, 213, 373, 594, 895, 1095, 1271, 1355, 1846
HpaI	GTTAAC	1 cut(s)	45
HpaII	CCGG	2 cut(s)	127, 241
HphI	GGTGA	4 cut(s)	1094, 1193, 1412, 1858
Hpy166II	GTNNAC	5 cut(s)	45, 529, 643, 687, 1369
Hpy188I	TCNGA	5 cut(s)	1174, 1263, 1723, 1902, 1915
Hpy188III	TCNNGA	6 cut(s)	127, 763, 989, 1001, 1665, 1850
Hpy8I	GTNNAC	5 cut(s)	45, 529, 643, 687, 1369
HpyAV	CCTTC	6 cut(s)	64, 161, 328, 1548, 1780, 1897
HpyCH4III	ACNGT	7 cut(s)	466, 526, 949, 1321, 1448, 1643, 1770
HpyCH4IV	ACGT	1 cut(s)	908
HpyF10VI	GCNNNNNNNGC	6 cut(s)	413, 671, 869, 980, 1787, 1837
HpyF3I	CTNAG	2 cut(s)	1171, 1248
HpySE526I	ACGT	1 cut(s)	908
Hsp92II	CATG	9 cut(s)	734, 766, 856, 1057, 1421, 1478, 1615, 1622, 1845
HspAI	GCGC	2 cut(s)	1155, 1790
KflI	GGGWCCC	1 cut(s)	237
Kpn2I	TCCGGA	1 cut(s)	126
KpnI	GGTACC	1 cut(s)	1505
KspAI	GTTAAC	1 cut(s)	45
Kzo9I	GATC	5 cut(s)	284, 884, 991, 1624, 1809
LmnI	GCTCC	4 cut(s)	259, 1075, 1205, 1213
Lsp1109I	GCAGC	4 cut(s)	847, 851, 1564, 1675
LweI	GCATC	3 cut(s)	543, 931, 1053
MaeI	CTAG	5 cut(s)	423, 564, 743, 1034, 1493
MaeII	ACGT	1 cut(s)	908
MaeIII	GTNAC	9 cut(s)	268, 457, 748, 1049, 1315, 1400, 1546, 1637, 1864
MalI	GATC	5 cut(s)	286, 886, 993, 1626, 1811
MboI	GATC	5 cut(s)	284, 884, 991, 1624, 1809
MboII	GAAGA	9 cut(s)	407, 440, 650, 1352, 1517, 1533, 1691, 1751, 1928
MfeI	CAATTG	1 cut(s)	1122
MflI	RGATCY	3 cut(s)	284, 884, 1809
MhlI	GDGCHC	4 cut(s)	28, 480, 1072, 1210
MlyI	GAGTC	4 cut(s)	164, 382, 889, 1840
MmeI	TCCRAC	2 cut(s)	378, 1183
MroI	TCCGGA	1 cut(s)	126
MroXI	GAANNNNTTC	2 cut(s)	598, 1907
MseI	TTAA	4 cut(s)	44, 1235, 1464, 1772
MslI	CAYNNNNRTG	3 cut(s)	542, 735, 1422
MspA1I	CMGCKG	1 cut(s)	974
MspI	CCGG	2 cut(s)	127, 241
MspR9I	CCNGG	5 cut(s)	114, 241, 777, 830, 1862
MunI	CAATTG	1 cut(s)	1122
Mva1269I	GAATGC	1 cut(s)	1533
MvaI	CCWGG	4 cut(s)	114, 777, 830, 1862
MvnI	CGCG	2 cut(s)	1200, 1792
MwoI	GCNNNNNNNGC	6 cut(s)	413, 671, 869, 980, 1787, 1837
NciI	CCSGG	1 cut(s)	241
NcoI	CCATGG	1 cut(s)	1841
NdeI	CATATG	1 cut(s)	539
NdeII	GATC	5 cut(s)	284, 884, 991, 1624, 1809
NlaIII	CATG	9 cut(s)	734, 766, 856, 1057, 1421, 1478, 1615, 1622, 1845
NmeAIII	GCCGAG	1 cut(s)	1850
NmuCI	GTSAC	3 cut(s)	1400, 1546, 1864
NspI	RCATGY	3 cut(s)	734, 1057, 1622
NspV	TTCGAA	1 cut(s)	1512
PaeI	GCATGC	1 cut(s)	1622
PagI	TCATGA	1 cut(s)	762
PaqCI	CACCTGC	1 cut(s)	576
PctI	GAATGC	1 cut(s)	1533
PdmI	GAANNNNTTC	2 cut(s)	598, 1907
PfeI	GAWTC	5 cut(s)	213, 594, 1095, 1271, 1355
PfoI	TCCNGGA	1 cut(s)	828
PkrI	GCNGC	5 cut(s)	841, 862, 1579, 1595, 1690
PleI	GAGTC	4 cut(s)	163, 381, 889, 1840
PpsI	GAGTC	4 cut(s)	163, 381, 889, 1840
PpuMI	RGGWCCY	1 cut(s)	237
PshAI	GACNNNNGTC	1 cut(s)	770
Psp124BI	GAGCTC	1 cut(s)	1210
Psp5II	RGGWCCY	1 cut(s)	237
Psp6I	CCWGG	4 cut(s)	112, 775, 828, 1860
PspEI	GGTNACC	1 cut(s)	1864
PspGI	CCWGG	4 cut(s)	112, 775, 828, 1860
PspPI	GGNCC	3 cut(s)	237, 1021, 1307
PspPPI	RGGWCCY	1 cut(s)	237
PsrI	GAACNNNNNNTAC	2 cut(s)	1343, 1375
PstI	CTGCAG	1 cut(s)	667
PstNI	CAGNNNCTG	1 cut(s)	1550
PsuI	RGATCY	3 cut(s)	284, 884, 1809
PvuII	CAGCTG	1 cut(s)	974
RsaI	GTAC	4 cut(s)	700, 1011, 1117, 1503
RsaNI	GTAC	4 cut(s)	699, 1010, 1116, 1502
RseI	CAYNNNNRTG	3 cut(s)	542, 735, 1422
SacI	GAGCTC	1 cut(s)	1210
SaqAI	TTAA	4 cut(s)	44, 1235, 1464, 1772
SatI	GCNGC	5 cut(s)	840, 861, 1578, 1594, 1689
Sau3AI	GATC	5 cut(s)	284, 884, 991, 1624, 1809
Sau96I	GGNCC	3 cut(s)	237, 1021, 1307
SchI	GAGTC	4 cut(s)	164, 382, 889, 1840
ScrFI	CCNGG	5 cut(s)	114, 241, 777, 830, 1862
SduI	GDGCHC	4 cut(s)	28, 480, 1072, 1210
SfaNI	GCATC	3 cut(s)	543, 931, 1053
SfcI	CTRYAG	2 cut(s)	663, 873
SfuI	TTCGAA	1 cut(s)	1512
SinI	GGWCC	3 cut(s)	237, 1021, 1307
SmiMI	CAYNNNNRTG	3 cut(s)	542, 735, 1422
SmlI	CTYRAG	2 cut(s)	1433, 1877
SmoI	CTYRAG	2 cut(s)	1433, 1877
SphI	GCATGC	1 cut(s)	1622
SsiI	CCGC	5 cut(s)	35, 532, 608, 674, 1594
SspMI	CTAG	5 cut(s)	423, 564, 743, 1034, 1493
SstI	GAGCTC	1 cut(s)	1210
StyD4I	CCNGG	5 cut(s)	112, 239, 775, 828, 1860
StyI	CCWWGG	3 cut(s)	711, 1492, 1841
TaaI	ACNGT	7 cut(s)	466, 526, 949, 1321, 1448, 1643, 1770
TaiI	ACGT	1 cut(s)	911
TaqI	TCGA	3 cut(s)	1000, 1512, 1666
TatI	WGTACW	1 cut(s)	698
TauI	GCSGC	1 cut(s)	1596
TfiI	GAWTC	5 cut(s)	213, 594, 1095, 1271, 1355
Tru1I	TTAA	4 cut(s)	44, 1235, 1464, 1772
Tru9I	TTAA	4 cut(s)	44, 1235, 1464, 1772
TscAI	CASTG	6 cut(s)	323, 531, 1551, 1593, 1680, 1773
TseFI	GTSAC	3 cut(s)	1400, 1546, 1864
TseI	GCWGC	4 cut(s)	839, 860, 1577, 1688
Tsp45I	GTSAC	3 cut(s)	1400, 1546, 1864
TspDTI	ATGAA	8 cut(s)	290, 591, 1087, 1212, 1353, 1406, 1517, 1622
TspGWI	ACGGA	2 cut(s)	1013, 1037
TspRI	CASTG	6 cut(s)	323, 531, 1551, 1593, 1680, 1773
VpaK11BI	GGWCC	3 cut(s)	237, 1021, 1307
XagI	CCTNNNNNAGG	2 cut(s)	1251, 1496
XapI	RAATTY	1 cut(s)	1413
XceI	RCATGY	3 cut(s)	734, 1057, 1622
XmaJI	CCTAGG	1 cut(s)	1492
XmiI	GTMKAC	1 cut(s)	686
XmnI	GAANNNNTTC	2 cut(s)	598, 1907
XspI	CTAG	5 cut(s)	423, 564, 743, 1034, 1493

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.