Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr6B

Orthogroup ID

OG0009812

Physical Location & Seq

Genomic Coordinates Forward (+)

60390308 .. 60395350

Gene Structure 5043 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh6BG374800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2088 bp

ATGGTTCCTACCTATGTTGTTGGTGCCCTTGTTCCGCTTTTGTTAACTCTTTTACTTCACAAGTCCAAGAAGGAAACCAAACGGGGTTTGCTCGTCGATGTTGGTGGGGAACCTGGCTATGCAATCCGGAACCATCATTCTGCTTCCCCGGTGGAGTCAGCTTGGGAAGGGATTTCAACTCTTGCTCAACTTTTTGACCAGTCCTGCAACCGATTCCAAAATAAGTGCTTTCTTGGAAGCCGGGCATTGGTGTCAAGGGAGCTCGAAGTTACAAAGGATGGGAAATCCTTTGAGAAGCTTCATTTGGGAGACTACAAGTGGCTAACTTATGGGAAGGCATTTGAAGTTGTGTGCAACTTTGCTTCTGGTTTGAGTCAGCTTGGACATAAAAGGGAAGAACGAGTAGCAATCTTTGCTGACACTAGAGAAGAGTGGTTCCTTGCATTGCAGGGTTGTTTTAGGCGCAATGTCACTGTTGTTACCATATATGCATCTCTTGGGGAGGAGGCTTTATGTCACTCATTAAATGAGACAGAAGTTACAACTGTGATTTGTGGGCACAAAGAACTGGAGAAACTTGCAGCCATAAGTGGACAACTTGACACAGTGAACCGCATCATATGTATGGATGATGATATCCCATCTAGTGCTTCGTCTGTTGATAGCAGGTGGAGAATCACTTCATTTGCGGATGTTGAGAAACTTGGACGAGAAAACCCTGTTGATCCTGAATTACCTCTTCCTGCAGATATTGCGGTCATTATGTATACAAGTGGAAGTACAGGATTGCCCAAGGGTGTAATGATGACACATGCTAATGTCCTAGCTGTTACTTCTGCTGTCATGACCATTGTCCCTGGTATTGGAACCAAGGATATCTATATGGCATATCTGCCCCTTGCTCATATCCTGGAATTAGCAGCAGAGAATGTCATGGTTGCTGCTGGAAGTGCTATAGGGTATGGATCTCCTTTGACTCTTACAGATACGTCAAGTAAAATAAAAAAGGGAACAAAGGGGGATGCAACTGCGCTTTTGCCAACTTTATTGACAGCTGTTCCTGCAATTCTTGATCGTGTTCGAGATGGGGTGCTCAATAAGGTAAATGCAAAAGGTGGGCTATCCAAGAAATTGTTTGAGTTGGCGTATGCTCGTAGGTTGTCTGCTGTGAATGGCAGCTGGTTTGGGGCCTGGGGCCTGGAAAGGATTCTGTGGGACTTTCTTGTGTTTAGAAAGGTCCGTGCAATTCTAGGAGGTCGCATCCGTTACATGCTATCTGGTGGTGCTCCTCTTTCTGGTGATACTCAAAGATTCATCAACATTTGCATTGGTACTTCAATTGGTCAAGGGTATGGTCTCACAGAAACTTGCGCTGGCGGAACATTCTCAGAGTTTGGTGATACCTCTGTTGGTCGCGTTGGAGCTCCACTTCCCTGTTCATTTATCAAGTTAATTGATTGGCCTGAAGGAGGATATCTGATTAGTGATTCCCCAATGCCTCGTGGAGAGATAGTCATTGGTGGTCCAAATGTTACAGTCGGTTATTTCAAAAATGAAGAAAAAACGAACGAATCTTACAAGGTTGACGAGAGAGGAATGAGGTGGTTCTATACAGGTGACATTGGGCAAATTCATGCCGATGGTTGCCTTGAGATAATTGACCGTAGGAAAGATATAGTTAAGCTTCAACATGGGGAGTATGTCTCCTTAGGAAAGGTTGAGGCTGCTCTTTCAGTGTGCCGCTATATTGACAATATCATGGTGCATGCTGATCCTTTTCATAGTTACTGTGTGGCTCTCGTGGTCGCTTCTCGAACCACAGTGGAAGATTGGGCTGCAAAGCAAGGAATTACTTTTATTGAGTTTTCAGACTTGTGTGAGAAAGAAGAAACCAGAAAAGAAGTGCAAGCATCACTGTTAAAGGAAGCAAAGAAGGCGCGTTTGCAGAAGTTTGAGATCCCTGCAAAAATCAAATTGCTTTTTGAGCCATGGACTCCTGAAAGTGGCCTGGTCACCTCAGCTCTCAAGCTCAAAAGAGATATCATTCGGAAGGCTTTCTCTGAAGACCTCTCCAAGTTATACGCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001676 GO:0003674 GO:0003824 GO:0004467 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006082 GO:0006629 GO:0006631 GO:0008150 GO:0008152 GO:0009507 GO:0009526 GO:0009536 GO:0009941 GO:0009987 GO:0015645 GO:0016020 GO:0016405 GO:0016874 GO:0016877 GO:0016878 GO:0019752 GO:0031967 GO:0031975 GO:0032787 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0044237 GO:0044238 GO:0044255 GO:0044281 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0071704

KEGG Pathways

Metabolic & Signaling

ko00061 ko00071 ko01100 ko01212 ko02024 ko03320 ko04146 ko04216 ko04714 ko04920 map00061 map00071 map01100 map01212 map02024 map03320 map04146 map04216 map04714 map04920

Pfam Domains

Protein Families

AMP-binding

Protein Analysis

695

Amino Acids

76.23

Weight (kDa)

7.17

Isoelectric Point (pI)

34.02

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
AMP-binding	PF00501	101 - 516	9.1e-81	AMP-binding enzyme

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009812)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G77590 AT1G77590
fragaria_vesca	FvH4_2g26850
malus_domestica	MD08G1163100.v1.1 MD15G1349800.v1.1
prunus_persica	Prupe.1G499000_v2.0.a1 Prupe.1G499000_v2.0.a1
pyrus_communis	pycom08g14100 pycom15g31290
rosa_chinensis	RchiOBHm_Chr6g0295701
rosa_laevigata	RLG00000011774
rosa_multiflora	Rmu_sc0007372.1_g000004 Rmu_sc0007986.1_g000001
rosa_roxburghii	Rroxscaffold_7G00172200
rosa_rugosa	Rorug06G0253400 Rorug06G0253500 Rorug06G0253600
rosa_samantha	Rh6AG367000 Rh6BG374800 Rh6DG367900
rosa_wichuraiana	Rw6G032030

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	657
Acc36I	ACCTGC	1 cut(s)	657
AccB1I	GGYRCC	1 cut(s)	23
AccI	GTMKAC	1 cut(s)	767
AccII	CGCG	2 cut(s)	1416, 1939
AccIII	TCCGGA	1 cut(s)	126
AciI	CCGC	6 cut(s)	35, 613, 689, 755, 1377, 1741
AclWI	GGATC	4 cut(s)	719, 973, 1766, 1951
AcsI	RAATTY	1 cut(s)	1629
AcuI	CTGAAG	2 cut(s)	1485, 2082
AfaI	GTAC	2 cut(s)	781, 1333
AfiI	CCNNNNNNNGG	5 cut(s)	247, 863, 1295, 1469, 2003
AgsI	TTSAA	5 cut(s)	177, 344, 1338, 1549, 1688
AjnI	CCWGG	6 cut(s)	112, 856, 909, 1190, 1197, 2007
AjuI	GAANNNNNNNTTGG	2 cut(s)	287, 319
Alw21I	GWGCWC	4 cut(s)	264, 1095, 1288, 1426
Alw26I	GTCTC	4 cut(s)	303, 524, 1361, 1708
AlwI	GGATC	4 cut(s)	719, 973, 1766, 1951
Aor13HI	TCCGGA	1 cut(s)	126
AoxI	GGCC	4 cut(s)	1188, 1195, 1460, 2005
ApeKI	GCWGC	6 cut(s)	581, 920, 941, 1176, 1724, 1835
ApoI	RAATTY	1 cut(s)	1629
Asp700I	GAANNNNTTC	3 cut(s)	679, 1206, 2054
AspLEI	GCGC	4 cut(s)	465, 1033, 1373, 1939
AspS9I	GGNCC	4 cut(s)	1188, 1195, 1237, 1523
AsuC2I	CCSGG	2 cut(s)	149, 242
AsuHPI	GGTGA	4 cut(s)	1310, 1409, 1628, 2005
AvaII	GGWCC	2 cut(s)	1237, 1523
AxyI	CCTNAGG	1 cut(s)	1708
BaeGI	GKGCMC	2 cut(s)	28, 561
BaeI	ACNNNNGTAYC	2 cut(s)	1392, 1425
BanI	GGYRCC	1 cut(s)	23
BanII	GRGCYC	2 cut(s)	264, 1426
BauI	CACGAG	2 cut(s)	1500, 1799
BbsI	GAAGAC	1 cut(s)	2070
Bbv12I	GWGCWC	4 cut(s)	264, 1095, 1288, 1426
BbvCI	CCTCAGC	1 cut(s)	2017
BbvI	GCAGC	6 cut(s)	593, 928, 932, 1188, 1711, 1822
BccI	CCATC	5 cut(s)	141, 272, 649, 1079, 1634
BciT130I	CCWGG	6 cut(s)	114, 858, 911, 1192, 1199, 2009
BcnI	CCSGG	2 cut(s)	149, 242
BcoDI	GTCTC	4 cut(s)	303, 524, 1361, 1708
BfaI	CTAG	4 cut(s)	423, 645, 824, 1250
BfmI	CTRYAG	2 cut(s)	744, 954
BfuAI	ACCTGC	1 cut(s)	657
BisI	GCNGC	7 cut(s)	582, 921, 942, 1177, 1725, 1741, 1836
BlsI	GCNGC	7 cut(s)	583, 922, 943, 1178, 1726, 1742, 1837
Bme1390I	CCNGG	8 cut(s)	114, 149, 242, 858, 911, 1192, 1199, 2009
Bme18I	GGWCC	2 cut(s)	1237, 1523
BmgT120I	GGNCC	4 cut(s)	1188, 1195, 1237, 1523
BmiI	GGNNCC	8 cut(s)	6, 25, 111, 131, 437, 868, 1189, 1196
BmrFI	CCNGG	8 cut(s)	114, 149, 242, 858, 911, 1192, 1199, 2009
BmsI	GCATC	5 cut(s)	500, 624, 1012, 1269, 1919
BoxI	GACNNNNGTC	1 cut(s)	851
BpiI	GAAGAC	1 cut(s)	2070
BplI	GAGNNNNNCTC	2 cut(s)	1688, 1720
BpmI	CTGGAG	1 cut(s)	590
Bpu10I	CCTNAGC	1 cut(s)	2017
BpuEI	CTTGAG	2 cut(s)	1670, 2009
BpuMI	CCSGG	2 cut(s)	149, 242
BsaI	GGTCTC	1 cut(s)	1361
BsaJI	CCNNGG	6 cut(s)	147, 792, 856, 870, 1191, 1988
BsaWI	WCCGGW	1 cut(s)	126
BsaXI	ACNNNNNCTCC	2 cut(s)	1497, 1527
Bsc4I	CCNNNNNNNGG	5 cut(s)	247, 863, 1295, 1469, 2003
Bse1I	ACTGG	2 cut(s)	199, 573
Bse21I	CCTNAGG	1 cut(s)	1708
Bse3DI	GCAATG	2 cut(s)	443, 472
BseAI	TCCGGA	1 cut(s)	126
BseBI	CCWGG	6 cut(s)	114, 858, 911, 1192, 1199, 2009
BseDI	CCNNGG	6 cut(s)	147, 792, 856, 870, 1191, 1988
BseGI	GGATG	5 cut(s)	283, 634, 697, 1027, 1260
BseLI	CCNNNNNNNGG	5 cut(s)	247, 863, 1295, 1469, 2003
BseMI	GCAATG	2 cut(s)	443, 472
BseMII	CTCAG	2 cut(s)	1401, 2031
BseNI	ACTGG	2 cut(s)	199, 573
BseRI	GAGGAG	2 cut(s)	518, 1278
BseSI	GKGCMC	2 cut(s)	28, 561
BseXI	GCAGC	6 cut(s)	593, 928, 932, 1188, 1711, 1822
Bsh1236I	CGCG	2 cut(s)	1416, 1939
BshFI	GGCC	4 cut(s)	1190, 1197, 1462, 2007
BshNI	GGYRCC	1 cut(s)	23
BsiHKAI	GWGCWC	4 cut(s)	264, 1095, 1288, 1426
BsiSI	CCGG	3 cut(s)	127, 149, 241
BslFI	GGGAC	2 cut(s)	839, 1229
BslI	CCNNNNNNNGG	5 cut(s)	247, 863, 1295, 1469, 2003
BsmAI	GTCTC	4 cut(s)	303, 524, 1361, 1708
BsmFI	GGGAC	2 cut(s)	839, 1229
BsnI	GGCC	4 cut(s)	1190, 1197, 1462, 2007
Bso31I	GGTCTC	1 cut(s)	1361
Bsp1286I	GDGCHC	6 cut(s)	28, 264, 561, 1095, 1288, 1426
Bsp13I	TCCGGA	1 cut(s)	126
Bsp143I	GATC	5 cut(s)	724, 965, 1072, 1771, 1956
Bsp19I	CCATGG	1 cut(s)	1988
BspACI	CCGC	6 cut(s)	35, 613, 689, 755, 1377, 1741
BspANI	GGCC	4 cut(s)	1190, 1197, 1462, 2007
BspCNI	CTCAG	2 cut(s)	1400, 2030
BspEI	TCCGGA	1 cut(s)	126
BspFNI	CGCG	2 cut(s)	1416, 1939
BspHI	TCATGA	1 cut(s)	843
BspLI	GGNNCC	8 cut(s)	6, 25, 111, 131, 437, 868, 1189, 1196
BspMAI	CTGCAG	1 cut(s)	748
BspMI	ACCTGC	1 cut(s)	657
BspPI	GGATC	4 cut(s)	719, 973, 1766, 1951
BspT107I	GGYRCC	1 cut(s)	23
BspTNI	GGTCTC	1 cut(s)	1361
BsrDI	GCAATG	2 cut(s)	443, 472
BsrI	ACTGG	2 cut(s)	199, 573
BssECI	CCNNGG	6 cut(s)	147, 792, 856, 870, 1191, 1988
BssMI	GATC	5 cut(s)	724, 965, 1072, 1771, 1956
BssNAI	GTATAC	1 cut(s)	768
BssSI	CACGAG	2 cut(s)	1500, 1799
BssT1I	CCWWGG	3 cut(s)	792, 870, 1988
Bst1107I	GTATAC	1 cut(s)	768
Bst2BI	CACGAG	2 cut(s)	1500, 1799
Bst2UI	CCWGG	6 cut(s)	114, 858, 911, 1192, 1199, 2009
Bst4CI	ACNGT	8 cut(s)	475, 547, 607, 1537, 1664, 1790, 1822, 1917
Bst6I	CTCTTC	2 cut(s)	423, 744
BstAPI	GCANNNNNTGC	2 cut(s)	413, 752
BstC8I	GCNNGC	3 cut(s)	1375, 1767, 1908
BstDEI	CTNAG	3 cut(s)	1387, 1708, 2017
BstDSI	CCRYGG	1 cut(s)	1988
BstEII	GGTNACC	1 cut(s)	2011
BstENI	CCTNNNNNAGG	1 cut(s)	1467
BstF5I	GGATG	5 cut(s)	283, 634, 697, 1027, 1260
BstFNI	CGCG	2 cut(s)	1416, 1939
BstHHI	GCGC	4 cut(s)	465, 1033, 1373, 1939
BstKTI	GATC	5 cut(s)	727, 968, 1075, 1774, 1959
BstMAI	GTCTC	4 cut(s)	303, 524, 1361, 1708
BstMBI	GATC	5 cut(s)	724, 965, 1072, 1771, 1956
BstMWI	GCNNNNNNNGC	6 cut(s)	413, 752, 950, 1061, 1934, 1984
BstNI	CCWGG	6 cut(s)	114, 858, 911, 1192, 1199, 2009
BstNSI	RCATGY	3 cut(s)	815, 1273, 1769
BstPAI	GACNNNNGTC	1 cut(s)	851
BstPI	GGTNACC	1 cut(s)	2011
BstSCI	CCNGG	8 cut(s)	112, 147, 240, 856, 909, 1190, 1197, 2007
BstSFI	CTRYAG	2 cut(s)	744, 954
BstSLI	GKGCMC	2 cut(s)	28, 561
BstUI	CGCG	2 cut(s)	1416, 1939
BstV1I	GCAGC	6 cut(s)	593, 928, 932, 1188, 1711, 1822
BstV2I	GAAGAC	1 cut(s)	2070
BstX2I	RGATCY	2 cut(s)	965, 1956
BstYI	RGATCY	2 cut(s)	965, 1956
BstZ17I	GTATAC	1 cut(s)	768
Bsu36I	CCTNAGG	1 cut(s)	1708
BsuRI	GGCC	4 cut(s)	1190, 1197, 1462, 2007
BtgI	CCRYGG	1 cut(s)	1988
BtsCI	GGATG	5 cut(s)	283, 634, 697, 1027, 1260
BtsIMutI	CAGTG	5 cut(s)	471, 612, 1740, 1827, 1913
BveI	ACCTGC	1 cut(s)	657
Cac8I	GCNNGC	3 cut(s)	1375, 1767, 1908
CciI	TCATGA	1 cut(s)	843
CfoI	GCGC	4 cut(s)	465, 1033, 1373, 1939
Cfr13I	GGNCC	4 cut(s)	1188, 1195, 1237, 1523
Csp6I	GTAC	2 cut(s)	780, 1332
CviAII	CATG	9 cut(s)	812, 844, 934, 1270, 1634, 1691, 1759, 1766, 1989
CviQI	GTAC	2 cut(s)	780, 1332
DdeI	CTNAG	3 cut(s)	1387, 1708, 2017
DpnI	GATC	5 cut(s)	726, 967, 1074, 1773, 1958
DpnII	GATC	5 cut(s)	724, 965, 1072, 1771, 1956
Eam1104I	CTCTTC	2 cut(s)	423, 744
EarI	CTCTTC	2 cut(s)	423, 744
EciI	GGCGGA	1 cut(s)	1392
Ecl136II	GAGCTC	2 cut(s)	262, 1424
Eco130I	CCWWGG	3 cut(s)	792, 870, 1988
Eco24I	GRGCYC	2 cut(s)	264, 1426
Eco31I	GGTCTC	1 cut(s)	1361
Eco32I	GATATC	4 cut(s)	637, 877, 1475, 2041
Eco47I	GGWCC	2 cut(s)	1237, 1523
Eco53kI	GAGCTC	2 cut(s)	262, 1424
Eco57I	CTGAAG	2 cut(s)	1485, 2082
Eco81I	CCTNAGG	1 cut(s)	1708
Eco91I	GGTNACC	1 cut(s)	2011
EcoICRI	GAGCTC	2 cut(s)	262, 1424
EcoNI	CCTNNNNNAGG	1 cut(s)	1467
EcoO109I	RGGNCCY	2 cut(s)	1188, 1195
EcoO65I	GGTNACC	1 cut(s)	2011
EcoRII	CCWGG	6 cut(s)	112, 856, 909, 1190, 1197, 2007
EcoRV	GATATC	4 cut(s)	637, 877, 1475, 2041
EcoT14I	CCWWGG	3 cut(s)	792, 870, 1988
EcoT22I	ATGCAT	1 cut(s)	493
EcoT38I	GRGCYC	2 cut(s)	264, 1426
ErhI	CCWWGG	3 cut(s)	792, 870, 1988
FaeI	CATG	9 cut(s)	815, 847, 937, 1273, 1637, 1694, 1762, 1769, 1992
FaqI	GGGAC	2 cut(s)	839, 1229
FatI	CATG	9 cut(s)	811, 843, 933, 1269, 1633, 1690, 1758, 1765, 1988
FauNDI	CATATG	1 cut(s)	620
FblI	GTMKAC	1 cut(s)	767
Fnu4HI	GCNGC	7 cut(s)	582, 921, 942, 1177, 1725, 1741, 1836
FokI	GGATG	5 cut(s)	290, 641, 704, 1034, 1247
FriOI	GRGCYC	2 cut(s)	264, 1426
Fsp4HI	GCNGC	7 cut(s)	582, 921, 942, 1177, 1725, 1741, 1836
FspBI	CTAG	4 cut(s)	423, 645, 824, 1250
GlaI	GCGC	4 cut(s)	464, 1032, 1372, 1938
GluI	GCNGC	7 cut(s)	582, 921, 942, 1177, 1725, 1741, 1836
GsuI	CTGGAG	1 cut(s)	590
HaeIII	GGCC	4 cut(s)	1190, 1197, 1462, 2007
HapII	CCGG	3 cut(s)	127, 149, 241
HhaI	GCGC	4 cut(s)	465, 1033, 1373, 1939
Hin1II	CATG	9 cut(s)	815, 847, 937, 1273, 1637, 1694, 1762, 1769, 1992
Hin6I	GCGC	4 cut(s)	463, 1031, 1371, 1937
HinP1I	GCGC	4 cut(s)	463, 1031, 1371, 1937
HincII	GTYRAC	2 cut(s)	45, 1585
HindII	GTYRAC	2 cut(s)	45, 1585
HindIII	AAGCTT	2 cut(s)	296, 1682
HpaI	GTTAAC	1 cut(s)	45
HpaII	CCGG	3 cut(s)	127, 149, 241
HphI	GGTGA	4 cut(s)	1310, 1409, 1628, 2005
Hpy166II	GTNNAC	5 cut(s)	45, 593, 610, 768, 1585
Hpy188I	TCNGA	5 cut(s)	1390, 1479, 1870, 2049, 2062
Hpy188III	TCNNGA	7 cut(s)	127, 728, 844, 1070, 1082, 1812, 1997
Hpy8I	GTNNAC	5 cut(s)	45, 593, 610, 768, 1585
Hpy99I	CGWCG	1 cut(s)	98
HpyAV	CCTTC	6 cut(s)	64, 161, 328, 1460, 1927, 2044
HpyCH4III	ACNGT	8 cut(s)	475, 547, 607, 1537, 1664, 1790, 1822, 1917
HpyCH4IV	ACGT	1 cut(s)	989
HpyF10VI	GCNNNNNNNGC	6 cut(s)	413, 752, 950, 1061, 1934, 1984
HpyF3I	CTNAG	3 cut(s)	1387, 1708, 2017
HpySE526I	ACGT	1 cut(s)	989
Hsp92II	CATG	9 cut(s)	815, 847, 937, 1273, 1637, 1694, 1762, 1769, 1992
HspAI	GCGC	4 cut(s)	463, 1031, 1371, 1937
Kpn2I	TCCGGA	1 cut(s)	126
KspAI	GTTAAC	1 cut(s)	45
Kzo9I	GATC	5 cut(s)	724, 965, 1072, 1771, 1956
LmnI	GCTCC	4 cut(s)	259, 1291, 1421, 1429
Lsp1109I	GCAGC	6 cut(s)	593, 928, 932, 1188, 1711, 1822
LweI	GCATC	5 cut(s)	500, 624, 1012, 1269, 1919
MaeI	CTAG	4 cut(s)	423, 645, 824, 1250
MaeII	ACGT	1 cut(s)	989
MalI	GATC	5 cut(s)	726, 967, 1074, 1773, 1958
MboI	GATC	5 cut(s)	724, 965, 1072, 1771, 1956
MboII	GAAGA	7 cut(s)	407, 440, 731, 1568, 1838, 1898, 2075
MfeI	CAATTG	1 cut(s)	1338
MflI	RGATCY	2 cut(s)	965, 1956
MhlI	GDGCHC	6 cut(s)	28, 264, 561, 1095, 1288, 1426
MlyI	GAGTC	4 cut(s)	164, 382, 970, 1987
MmeI	TCCRAC	1 cut(s)	1399
Mph1103I	ATGCAT	1 cut(s)	493
MroI	TCCGGA	1 cut(s)	126
MroXI	GAANNNNTTC	3 cut(s)	679, 1206, 2054
MseI	TTAA	5 cut(s)	44, 524, 1451, 1680, 1919
MslI	CAYNNNNRTG	3 cut(s)	623, 816, 1638
MspA1I	CMGCKG	2 cut(s)	1055, 1179
MspI	CCGG	3 cut(s)	127, 149, 241
MspR9I	CCNGG	8 cut(s)	114, 149, 242, 858, 911, 1192, 1199, 2009
MunI	CAATTG	1 cut(s)	1338
MvaI	CCWGG	6 cut(s)	114, 858, 911, 1192, 1199, 2009
MvnI	CGCG	2 cut(s)	1416, 1939
MwoI	GCNNNNNNNGC	6 cut(s)	413, 752, 950, 1061, 1934, 1984
NciI	CCSGG	2 cut(s)	149, 242
NcoI	CCATGG	1 cut(s)	1988
NdeI	CATATG	1 cut(s)	620
NdeII	GATC	5 cut(s)	724, 965, 1072, 1771, 1956
NlaIII	CATG	9 cut(s)	815, 847, 937, 1273, 1637, 1694, 1762, 1769, 1992
NlaIV	GGNNCC	8 cut(s)	6, 25, 111, 131, 437, 868, 1189, 1196
NmuCI	GTSAC	4 cut(s)	469, 515, 1616, 2011
NsiI	ATGCAT	1 cut(s)	493
NspI	RCATGY	3 cut(s)	815, 1273, 1769
PaeI	GCATGC	1 cut(s)	1769
PagI	TCATGA	1 cut(s)	843
PaqCI	CACCTGC	1 cut(s)	657
PdmI	GAANNNNTTC	3 cut(s)	679, 1206, 2054
PfeI	GAWTC	6 cut(s)	213, 675, 1207, 1311, 1487, 1571
PfoI	TCCNGGA	1 cut(s)	909
PkrI	GCNGC	7 cut(s)	583, 922, 943, 1178, 1726, 1742, 1837
PleI	GAGTC	4 cut(s)	163, 381, 970, 1987
PpsI	GAGTC	4 cut(s)	163, 381, 970, 1987
PshAI	GACNNNNGTC	1 cut(s)	851
Psp124BI	GAGCTC	2 cut(s)	264, 1426
Psp6I	CCWGG	6 cut(s)	112, 856, 909, 1190, 1197, 2007
PspEI	GGTNACC	1 cut(s)	2011
PspGI	CCWGG	6 cut(s)	112, 856, 909, 1190, 1197, 2007
PspN4I	GGNNCC	8 cut(s)	6, 25, 111, 131, 437, 868, 1189, 1196
PspPI	GGNCC	4 cut(s)	1188, 1195, 1237, 1523
PsrI	GAACNNNNNNTAC	2 cut(s)	1559, 1591
PstI	CTGCAG	1 cut(s)	748
PsuI	RGATCY	2 cut(s)	965, 1956
PvuII	CAGCTG	2 cut(s)	1055, 1179
RsaI	GTAC	2 cut(s)	781, 1333
RsaNI	GTAC	2 cut(s)	780, 1332
RseI	CAYNNNNRTG	3 cut(s)	623, 816, 1638
SacI	GAGCTC	2 cut(s)	264, 1426
SaqAI	TTAA	5 cut(s)	44, 524, 1451, 1680, 1919
SatI	GCNGC	7 cut(s)	582, 921, 942, 1177, 1725, 1741, 1836
Sau3AI	GATC	5 cut(s)	724, 965, 1072, 1771, 1956
Sau96I	GGNCC	4 cut(s)	1188, 1195, 1237, 1523
SchI	GAGTC	4 cut(s)	164, 382, 970, 1987
ScrFI	CCNGG	8 cut(s)	114, 149, 242, 858, 911, 1192, 1199, 2009
SduI	GDGCHC	6 cut(s)	28, 264, 561, 1095, 1288, 1426
SfaNI	GCATC	5 cut(s)	500, 624, 1012, 1269, 1919
SfcI	CTRYAG	2 cut(s)	744, 954
SinI	GGWCC	2 cut(s)	1237, 1523
SmiMI	CAYNNNNRTG	3 cut(s)	623, 816, 1638
SmlI	CTYRAG	2 cut(s)	1649, 2024
SmoI	CTYRAG	2 cut(s)	1649, 2024
SphI	GCATGC	1 cut(s)	1769
SsiI	CCGC	6 cut(s)	35, 613, 689, 755, 1377, 1741
SspMI	CTAG	4 cut(s)	423, 645, 824, 1250
SstI	GAGCTC	2 cut(s)	264, 1426
StyD4I	CCNGG	8 cut(s)	112, 147, 240, 856, 909, 1190, 1197, 2007
StyI	CCWWGG	3 cut(s)	792, 870, 1988
TaaI	ACNGT	8 cut(s)	475, 547, 607, 1537, 1664, 1790, 1822, 1917
TaiI	ACGT	1 cut(s)	992
TaqI	TCGA	4 cut(s)	96, 264, 1081, 1813
TatI	WGTACW	1 cut(s)	779
TauI	GCSGC	1 cut(s)	1743
TfiI	GAWTC	6 cut(s)	213, 675, 1207, 1311, 1487, 1571
Tru1I	TTAA	5 cut(s)	44, 524, 1451, 1680, 1919
Tru9I	TTAA	5 cut(s)	44, 524, 1451, 1680, 1919
TscAI	CASTG	5 cut(s)	478, 612, 1740, 1827, 1920
TseFI	GTSAC	4 cut(s)	469, 515, 1616, 2011
TseI	GCWGC	6 cut(s)	581, 920, 941, 1176, 1724, 1835
Tsp45I	GTSAC	4 cut(s)	469, 515, 1616, 2011
TspDTI	ATGAA	7 cut(s)	290, 672, 1303, 1428, 1569, 1622, 1769
TspGWI	ACGGA	2 cut(s)	1229, 1253
TspRI	CASTG	5 cut(s)	478, 612, 1740, 1827, 1920
VpaK11BI	GGWCC	2 cut(s)	1237, 1523
XagI	CCTNNNNNAGG	1 cut(s)	1467
XapI	RAATTY	1 cut(s)	1629
XceI	RCATGY	3 cut(s)	815, 1273, 1769
XmiI	GTMKAC	1 cut(s)	767
XmnI	GAANNNNTTC	3 cut(s)	679, 1206, 2054
XspI	CTAG	4 cut(s)	423, 645, 824, 1250
Zsp2I	ATGCAT	1 cut(s)	493

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.