MD08G1217200.v1.1

Alkaline neutral invertase

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr08
Physical Location & Seq
Forward (+)
27993410 .. 27998395
4986 bp
Loading structure...
UTR
Exon/CDS
Intron
MD08G1217200.v1.1.491

Sequence Viewer

Length: 1671 bp
ATGGAAGGGACCAACTTTGGGCTACGAAATGTGAGCTCGCATTGCTCCATTTCGGACATGGATGACTATGACCTCTCACGCCTTCTTGACAAGCCCCGGCTCAACATTGAGAGGCAGAGGTCCTTTGATGAGAGGTCACTGAGTGAGCTCTCCATTGGCCTCACAAGAGTCGGCTTGGACAACATGGACAGCACCTACTCCCCCGGTGGAAGGTCTGGTTTTGACACTCCTGCTTCTTCTACTCGCAACTCGTTCGAGCCCCACCCTATGGTTGCCGAGGCATGGGAAGCTCTCCGCCGCTCTTTGGTCTTCTTTCGTAACCAGCCTGTGGGCACTATTGCTGCATACGATCATGCCTCTGAGGAAGTTTTGAATTATGATCAGGTTTTTGTCCGAGATTTTGTACCAAGTGCTCTGGCTTTCCTAATGAATGGTGAGCCAGAGATAGTTAAAAACTTCCTCTTGAAGACCCTGCAGCTTCAAGGATGGGAAAAGAGAATAGACAGGTTCAAGCTTGGGGAAGGTGCAATGCCAGCAAGCTTCAAAGTTCTTCATGACCCTATCCGAAAGTCAGATACAATCATTGCAGATTTCGGAGAGAGTGCAATTGGACGAGTTGCTCCTGTTGACTCTGGTTTTTGGTGGATTATACTGCTCCGTGCATATACAAAGTCAACTGGGGATTTATCTCTTGCGGAAACAGAAGATTGTCAAAAAGGAATGAGGCTTATATTGACTCTATGTCTGTCAGAAGGTTTTGACACGTTCCCAACATTGCTTTGTGCTGATGGATGCTCCATGATTGATCGTAGAATGGGAATTTATGGTTATCCTATTGAAATCCAAGCTTTGTTCTTTATGGCATTGAGATGTGCCTTGTCAATGCTGAAACCTGATGGAGAAGGAAAAGAATTCATAGAACGAATTGTTAAGCGTTTGCATGCCTTAAGTTACCACATGCGAGGTTACTTCTGGCTTGATTTCCAACAACTAAATGACATATACCGTTACAAGACTGAAGAGTACTCACACACGGCTGTAAATAAGTTCAATGTCATTCCTGATTCCATCCCAGATTGGGTATTTGATTTTATGCCATGCCGTGGTGGCTACTTTATTGGCAATGTGAGTCCTGCAAGGATGGATTTTCGATGGTTTGCTTTGGGTAACTGTGTTGCAATTCTAGCTTCTCTTGCAACCCCAGAGCAATCAATGGCTATAATGGATCTCATTGAATCTCGTTGGGAAGAGTTGGTTGGAGAAATGCCATTAAAAATATGTTATCCAGCAATAGAAAGTCATGAGTGGCGAATCGTAACTGGTTGTGATCCCAAGAATACCAGATGGAGTTACCATAATGGAGGATCTTGGCCAGTGCTTCTATGGATGCTAACTGCTGCGTGCATTAAAACGGGAAGACCACAAATCGCAAGACGGGCAATTGAGCTTGCTGAGAGTCGTCTGCTAAAAGATGCTTGGCCAGAATATTATGACGGGAAACTCGGAAGATATATTGGTAAACAAGCAAGGAAGTACCAGACATGGTCGATAGCAGGATATCTGGTTGCAAAGATGTTGCTAGAGGATCCGTCACACTTGGGGATGATTTCGCTCGAAGAGGACAAGCAAATGAAGCCCGTTATTAAGAGATCGTCGTCTTGGACTTGCTGA

Protein Analysis

557

Amino Acids

63.44

Weight (kDa)

5.91

Isoelectric Point (pI)

50.2

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Glyco_hydro_100 PF12899 94 - 530 1.9e-219 Alkaline and neutral invertase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 3 cut(s) 268, 328, 1103
AccBSI CCGCTC 1 cut(s) 300
AciI CCGC 3 cut(s) 295, 298, 695
AclWI GGATC 5 cut(s) 1233, 1322, 1372, 1580, 1593
AcoI YGGCCR 2 cut(s) 1370, 1478
AcsI RAATTY 2 cut(s) 819, 911
AcuI CTGAAG 1 cut(s) 1038
AdeI CACNNNGTG 1 cut(s) 143
AfaI GTAC 3 cut(s) 405, 1025, 1535
AfiI CCNNNNNNNGG 8 cut(s) 18, 210, 268, 282, 304, 328, 1078, 1103
AflII CTTAAG 1 cut(s) 946
AflIII ACRYGT 1 cut(s) 762
AgsI TTSAA 8 cut(s) 373, 466, 482, 511, 544, 839, 1051, 1235
AhdI GACNNNNNGTC 1 cut(s) 741
AjuI GAANNNNNNNTTGG 2 cut(s) 1239, 1271
AluBI AGCT 9 cut(s) 36, 148, 290, 478, 514, 540, 848, 1187, 1447
AluI AGCT 9 cut(s) 36, 148, 290, 478, 514, 540, 848, 1187, 1447
Alw21I GWGCWC 3 cut(s) 38, 150, 415
AlwI GGATC 5 cut(s) 1233, 1322, 1372, 1580, 1593
AoxI GGCC 3 cut(s) 157, 1370, 1478
ApeKI GCWGC 3 cut(s) 341, 475, 1397
ApoI RAATTY 2 cut(s) 819, 911
AspS9I GGNCC 2 cut(s) 9, 120
AsuC2I CCSGG 2 cut(s) 97, 204
AsuHPI GGTGA 1 cut(s) 446
AvaII GGWCC 2 cut(s) 9, 120
BaeGI GKGCMC 1 cut(s) 335
BalI TGGCCA 2 cut(s) 1372, 1480
BamHI GGATCC 1 cut(s) 1585
BanII GRGCYC 3 cut(s) 38, 150, 261
BbsI GAAGAC 3 cut(s) 301, 473, 1423
Bbv12I GWGCWC 3 cut(s) 38, 150, 415
BbvI GCAGC 3 cut(s) 328, 487, 1384
BccI CCATC 7 cut(s) 480, 782, 890, 1076, 1135, 1146, 1338
BceAI ACGGC 2 cut(s) 1050, 1086
BcgI CGANNNNNNTGC 2 cut(s) 235, 269
BclI TGATCA 1 cut(s) 379
BcnI CCSGG 2 cut(s) 97, 204
BfaI CTAG 2 cut(s) 1184, 1580
BfmI CTRYAG 1 cut(s) 473
BfrI CTTAAG 1 cut(s) 946
BglI GCCNNNNNGGC 1 cut(s) 1107
BisI GCNGC 4 cut(s) 298, 342, 476, 1398
BlsI GCNGC 4 cut(s) 299, 343, 477, 1399
BmcAI AGTACT 1 cut(s) 1025
Bme1390I CCNGG 2 cut(s) 97, 204
Bme18I GGWCC 2 cut(s) 9, 120
BmeRI GACNNNNNGTC 1 cut(s) 741
BmgT120I GGNCC 2 cut(s) 9, 120
BmiI GGNNCC 2 cut(s) 10, 1587
BmrFI CCNGG 2 cut(s) 97, 204
BmrI ACTGGG 1 cut(s) 687
BmsI GCATC 3 cut(s) 782, 1377, 1462
BmuI ACTGGG 1 cut(s) 687
BpiI GAAGAC 3 cut(s) 301, 473, 1423
BpuMI CCSGG 2 cut(s) 97, 204
BsaJI CCNNGG 4 cut(s) 95, 202, 276, 1102
Bsc4I CCNNNNNNNGG 8 cut(s) 18, 210, 268, 282, 304, 328, 1078, 1103
Bse1I ACTGG 3 cut(s) 682, 1324, 1373
Bse3DI GCAATG 5 cut(s) 40, 534, 582, 773, 1129
BseDI CCNNGG 4 cut(s) 95, 202, 276, 1102
BseGI GGATG 7 cut(s) 67, 491, 797, 1068, 1146, 1392, 1608
BseLI CCNNNNNNNGG 8 cut(s) 18, 210, 268, 282, 304, 328, 1078, 1103
BseMI GCAATG 5 cut(s) 40, 534, 582, 773, 1129
BseMII CTCAG 3 cut(s) 131, 351, 1443
BseNI ACTGG 3 cut(s) 682, 1324, 1373
BseSI GKGCMC 1 cut(s) 335
BseXI GCAGC 3 cut(s) 328, 487, 1384
BshFI GGCC 3 cut(s) 159, 1372, 1480
BsiHKAI GWGCWC 3 cut(s) 38, 150, 415
BsiSI CCGG 2 cut(s) 97, 204
BslFI GGGAC 1 cut(s) 22
BslI CCNNNNNNNGG 8 cut(s) 18, 210, 268, 282, 304, 328, 1078, 1103
BsmFI GGGAC 1 cut(s) 22
BsnI GGCC 3 cut(s) 159, 1372, 1480
Bsp1286I GDGCHC 5 cut(s) 38, 150, 261, 335, 415
Bsp143I GATC 8 cut(s) 349, 379, 805, 1225, 1327, 1364, 1585, 1649
BspACI CCGC 3 cut(s) 295, 298, 695
BspANI GGCC 3 cut(s) 159, 1372, 1480
BspCNI CTCAG 3 cut(s) 132, 352, 1444
BspHI TCATGA 2 cut(s) 553, 1300
BspLI GGNNCC 2 cut(s) 10, 1587
BspMAI CTGCAG 1 cut(s) 477
BspPI GGATC 5 cut(s) 1233, 1322, 1372, 1580, 1593
BspTI CTTAAG 1 cut(s) 946
BsrBI CCGCTC 1 cut(s) 300
BsrDI GCAATG 5 cut(s) 40, 534, 582, 773, 1129
BsrI ACTGG 3 cut(s) 682, 1324, 1373
BssECI CCNNGG 4 cut(s) 95, 202, 276, 1102
BssMI GATC 8 cut(s) 349, 379, 805, 1225, 1327, 1364, 1585, 1649
Bst4CI ACNGT 2 cut(s) 1007, 1172
Bst6I CTCTTC 3 cut(s) 1014, 1242, 1611
BstAFI CTTAAG 1 cut(s) 946
BstC8I GCNNGC 6 cut(s) 38, 534, 538, 942, 1402, 1449
BstDEI CTNAG 3 cut(s) 140, 360, 1452
BstDSI CCRYGG 1 cut(s) 1102
BstF5I GGATG 7 cut(s) 67, 491, 797, 1068, 1146, 1392, 1608
BstKTI GATC 8 cut(s) 352, 382, 808, 1228, 1330, 1367, 1588, 1652
BstMBI GATC 8 cut(s) 349, 379, 805, 1225, 1327, 1364, 1585, 1649
BstMWI GCNNNNNNNGC 8 cut(s) 42, 287, 533, 1107, 1184, 1193, 1436, 1633
BstNSI RCATGY 2 cut(s) 944, 961
BstSCI CCNGG 2 cut(s) 95, 202
BstSFI CTRYAG 1 cut(s) 473
BstSLI GKGCMC 1 cut(s) 335
BstV1I GCAGC 3 cut(s) 328, 487, 1384
BstV2I GAAGAC 3 cut(s) 301, 473, 1423
BstX2I RGATCY 3 cut(s) 1225, 1364, 1585
BstYI RGATCY 3 cut(s) 1225, 1364, 1585
BsuRI GGCC 3 cut(s) 159, 1372, 1480
BtgI CCRYGG 1 cut(s) 1102
BtsCI GGATG 7 cut(s) 67, 491, 797, 1068, 1146, 1392, 1608
BtsIMutI CAGTG 2 cut(s) 137, 1380
Cac8I GCNNGC 6 cut(s) 38, 534, 538, 942, 1402, 1449
CciI TCATGA 2 cut(s) 553, 1300
Cfr13I GGNCC 2 cut(s) 9, 120
Csp6I GTAC 3 cut(s) 404, 1024, 1534
CviQI GTAC 3 cut(s) 404, 1024, 1534
DdeI CTNAG 3 cut(s) 140, 360, 1452
DpnI GATC 8 cut(s) 351, 381, 807, 1227, 1329, 1366, 1587, 1651
DpnII GATC 8 cut(s) 349, 379, 805, 1225, 1327, 1364, 1585, 1649
DraIII CACNNNGTG 1 cut(s) 143
DriI GACNNNNNGTC 1 cut(s) 741
EaeI YGGCCR 2 cut(s) 1370, 1478
Eam1104I CTCTTC 3 cut(s) 1014, 1242, 1611
Eam1105I GACNNNNNGTC 1 cut(s) 741
EarI CTCTTC 3 cut(s) 1014, 1242, 1611
EciI GGCGGA 1 cut(s) 284
Ecl136II GAGCTC 2 cut(s) 36, 148
Eco24I GRGCYC 3 cut(s) 38, 150, 261
Eco32I GATATC 1 cut(s) 1559
Eco47I GGWCC 2 cut(s) 9, 120
Eco53kI GAGCTC 2 cut(s) 36, 148
Eco57I CTGAAG 1 cut(s) 1038
EcoICRI GAGCTC 2 cut(s) 36, 148
EcoO109I RGGNCCY 1 cut(s) 120
EcoRI GAATTC 1 cut(s) 911
EcoRV GATATC 1 cut(s) 1559
EcoT38I GRGCYC 3 cut(s) 38, 150, 261
FaqI GGGAC 1 cut(s) 22
FbaI TGATCA 1 cut(s) 379
Fnu4HI GCNGC 4 cut(s) 298, 342, 476, 1398
FokI GGATG 7 cut(s) 74, 498, 804, 1055, 1153, 1399, 1615
FriOI GRGCYC 3 cut(s) 38, 150, 261
Fsp4HI GCNGC 4 cut(s) 298, 342, 476, 1398
FspBI CTAG 2 cut(s) 1184, 1580
GluI GCNGC 4 cut(s) 298, 342, 476, 1398
HaeIII GGCC 3 cut(s) 159, 1372, 1480
HapII CCGG 2 cut(s) 97, 204
HincII GTYRAC 2 cut(s) 628, 675
HindII GTYRAC 2 cut(s) 628, 675
HindIII AAGCTT 3 cut(s) 512, 538, 846
HinfI GANTC 8 cut(s) 168, 629, 736, 1064, 1129, 1235, 1311, 1456
HpaII CCGG 2 cut(s) 97, 204
HphI GGTGA 1 cut(s) 446
Hpy166II GTNNAC 3 cut(s) 628, 675, 1520
Hpy188I TCNGA 8 cut(s) 55, 361, 395, 566, 574, 596, 751, 1505
Hpy188III TCNNGA 5 cut(s) 86, 463, 554, 1061, 1301
Hpy8I GTNNAC 3 cut(s) 628, 675, 1520
Hpy99I CGWCG 1 cut(s) 1657
HpyAV CCTTC 5 cut(s) 92, 204, 515, 746, 896
HpyCH4III ACNGT 2 cut(s) 1007, 1172
HpyCH4IV ACGT 1 cut(s) 764
HpyF10VI GCNNNNNNNGC 8 cut(s) 42, 287, 533, 1107, 1184, 1193, 1436, 1633
HpyF3I CTNAG 3 cut(s) 140, 360, 1452
HpySE526I ACGT 1 cut(s) 764
Ksp22I TGATCA 1 cut(s) 379
Kzo9I GATC 8 cut(s) 349, 379, 805, 1225, 1327, 1364, 1585, 1649
LmnI GCTCC 4 cut(s) 50, 625, 660, 800
Lsp1109I GCAGC 3 cut(s) 328, 487, 1384
LweI GCATC 3 cut(s) 782, 1377, 1462
MaeI CTAG 2 cut(s) 1184, 1580
MaeII ACGT 1 cut(s) 764
MaeIII GTNAC 9 cut(s) 135, 317, 950, 965, 1007, 1166, 1315, 1349, 1590
MalI GATC 8 cut(s) 351, 381, 807, 1227, 1329, 1366, 1587, 1651
MbiI CCGCTC 1 cut(s) 300
MboI GATC 8 cut(s) 349, 379, 805, 1225, 1327, 1364, 1585, 1649
MfeI CAATTG 2 cut(s) 606, 1440
MflI RGATCY 3 cut(s) 1225, 1364, 1585
MhlI GDGCHC 5 cut(s) 38, 150, 261, 335, 415
MlsI TGGCCA 2 cut(s) 1372, 1480
MluCI AATT 7 cut(s) 373, 606, 819, 911, 924, 1179, 1440
MluNI TGGCCA 2 cut(s) 1372, 1480
MlyI GAGTC 5 cut(s) 177, 623, 730, 1138, 1465
MmeI TCCRAC 2 cut(s) 1009, 1237
Mox20I TGGCCA 2 cut(s) 1372, 1480
MscI TGGCCA 2 cut(s) 1372, 1480
MseI TTAA 6 cut(s) 450, 930, 947, 1271, 1407, 1644
MslI CAYNNNNRTG 1 cut(s) 868
Msp20I TGGCCA 2 cut(s) 1372, 1480
MspCI CTTAAG 1 cut(s) 946
MspI CCGG 2 cut(s) 97, 204
MspR9I CCNGG 2 cut(s) 97, 204
MunI CAATTG 2 cut(s) 606, 1440
MwoI GCNNNNNNNGC 8 cut(s) 42, 287, 533, 1107, 1184, 1193, 1436, 1633
NciI CCSGG 2 cut(s) 97, 204
NdeII GATC 8 cut(s) 349, 379, 805, 1225, 1327, 1364, 1585, 1649
NlaIV GGNNCC 2 cut(s) 10, 1587
NmeAIII GCCGAG 1 cut(s) 301
NmuCI GTSAC 2 cut(s) 135, 1590
NspI RCATGY 2 cut(s) 944, 961
PaeI GCATGC 1 cut(s) 944
PagI TCATGA 2 cut(s) 553, 1300
PfeI GAWTC 3 cut(s) 1064, 1235, 1311
PflFI GACNNNGTC 1 cut(s) 1543
PflMI CCANNNNNTGG 3 cut(s) 268, 328, 1103
PkrI GCNGC 4 cut(s) 299, 343, 477, 1399
PleI GAGTC 5 cut(s) 176, 623, 730, 1137, 1464
PpsI GAGTC 5 cut(s) 176, 623, 730, 1137, 1464
PpuMI RGGWCCY 1 cut(s) 120
Psp124BI GAGCTC 2 cut(s) 38, 150
Psp5II RGGWCCY 1 cut(s) 120
PspN4I GGNNCC 2 cut(s) 10, 1587
PspPI GGNCC 2 cut(s) 9, 120
PspPPI RGGWCCY 1 cut(s) 120
PstI CTGCAG 1 cut(s) 477
PsuI RGATCY 3 cut(s) 1225, 1364, 1585
PsyI GACNNNGTC 1 cut(s) 1543
RsaI GTAC 3 cut(s) 405, 1025, 1535
RsaNI GTAC 3 cut(s) 404, 1024, 1534
RseI CAYNNNNRTG 1 cut(s) 868
SacI GAGCTC 2 cut(s) 38, 150
SaqAI TTAA 6 cut(s) 450, 930, 947, 1271, 1407, 1644
SatI GCNGC 4 cut(s) 298, 342, 476, 1398
Sau3AI GATC 8 cut(s) 349, 379, 805, 1225, 1327, 1364, 1585, 1649
Sau96I GGNCC 2 cut(s) 9, 120
ScaI AGTACT 1 cut(s) 1025
SchI GAGTC 5 cut(s) 177, 623, 730, 1138, 1465
ScrFI CCNGG 2 cut(s) 97, 204
SduI GDGCHC 5 cut(s) 38, 150, 261, 335, 415
SfaNI GCATC 3 cut(s) 782, 1377, 1462
SfcI CTRYAG 1 cut(s) 473
SinI GGWCC 2 cut(s) 9, 120
SmiMI CAYNNNNRTG 1 cut(s) 868
SmlI CTYRAG 1 cut(s) 946
SmoI CTYRAG 1 cut(s) 946
SphI GCATGC 1 cut(s) 944
Sse9I AATT 7 cut(s) 373, 606, 819, 911, 924, 1179, 1440
SsiI CCGC 3 cut(s) 295, 298, 695
SspI AATATT 1 cut(s) 1487
SspMI CTAG 2 cut(s) 1184, 1580
SstI GAGCTC 2 cut(s) 38, 150
StyD4I CCNGG 2 cut(s) 95, 202
TaaI ACNGT 2 cut(s) 1007, 1172
TaiI ACGT 1 cut(s) 767
TaqI TCGA 4 cut(s) 255, 1150, 1547, 1614
TasI AATT 7 cut(s) 373, 606, 819, 911, 924, 1179, 1440
TatI WGTACW 1 cut(s) 1023
TauI GCSGC 1 cut(s) 300
TfiI GAWTC 3 cut(s) 1064, 1235, 1311
Tru1I TTAA 6 cut(s) 450, 930, 947, 1271, 1407, 1644
Tru9I TTAA 6 cut(s) 450, 930, 947, 1271, 1407, 1644
TscAI CASTG 2 cut(s) 144, 1380
TseFI GTSAC 2 cut(s) 135, 1590
TseI GCWGC 3 cut(s) 341, 475, 1397
Tsp45I GTSAC 2 cut(s) 135, 1590
TspDTI ATGAA 4 cut(s) 443, 542, 904, 1646
TspGWI ACGGA 2 cut(s) 647, 1578
TspRI CASTG 2 cut(s) 144, 1380
Tth111I GACNNNGTC 1 cut(s) 1543
Van91I CCANNNNNTGG 3 cut(s) 268, 328, 1103
Vha464I CTTAAG 1 cut(s) 946
VpaK11BI GGWCC 2 cut(s) 9, 120
XapI RAATTY 2 cut(s) 819, 911
XceI RCATGY 2 cut(s) 944, 961
XcmI CCANNNNNNNNNTGG 2 cut(s) 55, 1380
XspI CTAG 2 cut(s) 1184, 1580
ZrmI AGTACT 1 cut(s) 1025
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.