Rmu_sc0001423.1_g000053

Alkaline neutral invertase

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0001423.1
Physical Location & Seq
Reverse (-)
248204 .. 253148
4945 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0001423.1_g000053.1.cds

Sequence Viewer

Length: 1614 bp
atggacgactacgatttgtcgcggcttcttgacaagccgaggctcaacattaagagggagaggtcctttgacgagaggtcactcagcgagctctccattggtctcgccagagccgggttggacaacttagatagctcatactcgccggggggaaggtccggtttcgacactcctgtttcgtccactcgcaactcatttgagccccatccaatggttgccgaggcgtgggatgctctccgtcgctctctggtgttcttccgaaaccagccggtggggaccattgctgcatatgatcatgcctctgaggaagttttgaactatgatcaggtttttgtgcgtgactttgtaccaagtgctctggctttcctaatgaatggtgagcctgagatagtgaaaaactttctcttgaagacccttcagcttcaaggctgggaaaaaagaatagaccggttcaagcttggagaaggtgcaatgccagcaagcttcaaagttcttcatgaccctattcggaagacagatactatccatgcagattttggtgagagtgcaattggacgagttgctcctgttgactctggtttctggtggattatactgctccgtgcatatacaaagtcaacaggggatttatctctggcggaaacaacagattgccaaaagggcatcaagcttatattgactctatgtctgtcagaaggttttgatacattcccaactttgctttgcgctgatggatgctctatgattgatcgtagaatgggaatatatggttatcctattgaaattcaagctctgttctttatggcgctcagatgtgcttgtgcattgctaaaacctgatacagaaggaaaagaatttatagaccgaatttcaaagcgtttgcatgccttaagttaccacatgcgaggttacttctggcttgatttccaacaattaaatgacatataccgttataagactgaagagtattcacacactgcagtaaataagttcaatgtcattcctgattccatcccagactgggtatttgattttatgcccacacgtggtggctactttattggcaatgtgagtcctgcaaggatggattttagatggtttgctctgggtaattgtattgcaattctatcttctcttgcaaccccagagcaatcaatagctataatggatctaattgaagctcgctgggaagagttggtgggagaaatgccgctaaaaattgtttatccagcaattgaaagtcatgagtggcgaattgttactggttgtgatcctaagaataccagatggagctaccataatggagggtcttggccagtgctattatggatgctaacggctgcctgcattaaaacgggacgaccacaaattgcaagaaagacaattgagcttgctgagagtcgtctgctaaaagattcttggccagaatattatgatgggaaactagggagatatattggcaaacaggcaaggaagtaccagacatggtcaatatctggatatctggttgcaaagatgatgctagaagatccatctcacttgggtatgatctcactggaagaggacaagcaaatgaagcctgtaattaggagatcatcatcgtggacttgctga

Protein Analysis

537

Amino Acids

61.34

Weight (kDa)

6.26

Isoelectric Point (pI)

49.9

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 954
AccB7I CCANNNNNTGG 2 cut(s) 211, 271
AccII CGCG 1 cut(s) 22
AciI CCGC 3 cut(s) 22, 638, 1211
AclWI GGATC 3 cut(s) 1176, 1265, 1523
AcoI YGGCCR 2 cut(s) 1313, 1421
AcsI RAATTY 3 cut(s) 783, 854, 867
AcuI CTGAAG 2 cut(s) 401, 981
AcvI CACGTG 1 cut(s) 1046
AdeI CACNNNGTG 1 cut(s) 1049
AfaI GTAC 2 cut(s) 348, 1478
AfiI CCNNNNNNNGG 6 cut(s) 114, 211, 225, 271, 1021, 1046
AflII CTTAAG 1 cut(s) 889
AflIII ACRYGT 1 cut(s) 1043
AgeI ACCGGT 1 cut(s) 447
AhdI GACNNNNNGTC 2 cut(s) 76, 684
Alw21I GWGCWC 2 cut(s) 93, 358
Alw26I GTCTC 1 cut(s) 107
AlwI GGATC 3 cut(s) 1176, 1265, 1523
AoxI GGCC 2 cut(s) 1313, 1421
ApeKI GCWGC 2 cut(s) 284, 1340
ApoI RAATTY 3 cut(s) 783, 854, 867
ArsI GACNNNNNNTTYG 2 cut(s) 1010, 1042
AsiGI ACCGGT 1 cut(s) 447
AspLEI GCGC 2 cut(s) 728, 808
AspS9I GGNCC 3 cut(s) 63, 156, 276
AsuC2I CCSGG 2 cut(s) 115, 147
AsuHPI GGTGA 2 cut(s) 389, 551
AvaII GGWCC 3 cut(s) 63, 156, 276
BalI TGGCCA 2 cut(s) 1315, 1423
BanII GRGCYC 2 cut(s) 93, 204
BbrPI CACGTG 1 cut(s) 1046
BbsI GAAGAC 2 cut(s) 416, 518
Bbv12I GWGCWC 2 cut(s) 93, 358
BbvI GCAGC 2 cut(s) 271, 1327
BccI CCATC 8 cut(s) 213, 725, 1019, 1078, 1089, 1281, 1430, 1540
BceAI ACGGC 1 cut(s) 1353
BclI TGATCA 2 cut(s) 292, 322
BcnI CCSGG 2 cut(s) 115, 147
BcoDI GTCTC 1 cut(s) 107
BfaI CTAG 2 cut(s) 1445, 1523
BfmI CTRYAG 1 cut(s) 978
BfoI RGCGCY 1 cut(s) 809
BfrI CTTAAG 1 cut(s) 889
BglI GCCNNNNNGGC 1 cut(s) 660
BisI GCNGC 4 cut(s) 23, 285, 1211, 1341
BlsI GCNGC 4 cut(s) 24, 286, 1212, 1342
Bme1390I CCNGG 2 cut(s) 115, 147
Bme18I GGWCC 3 cut(s) 63, 156, 276
BmeRI GACNNNNNGTC 2 cut(s) 76, 684
BmgT120I GGNCC 3 cut(s) 63, 156, 276
BmiI GGNNCC 1 cut(s) 277
BmrFI CCNGG 2 cut(s) 115, 147
BmrI ACTGGG 1 cut(s) 1030
BmsI GCATC 5 cut(s) 220, 672, 725, 1320, 1509
BmuI ACTGGG 1 cut(s) 1030
BpiI GAAGAC 2 cut(s) 416, 518
BpuMI CCSGG 2 cut(s) 115, 147
BsaAI YACGTR 1 cut(s) 1046
BsaBI GATNNNNATC 1 cut(s) 1597
BsaI GGTCTC 1 cut(s) 107
BsaJI CCNNGG 3 cut(s) 38, 146, 219
BsaWI WCCGGW 2 cut(s) 158, 447
Bsc4I CCNNNNNNNGG 6 cut(s) 114, 211, 225, 271, 1021, 1046
Bse118I RCCGGY 2 cut(s) 268, 447
Bse1I ACTGG 4 cut(s) 1025, 1267, 1316, 1560
Bse3DI GCAATG 4 cut(s) 279, 477, 824, 1072
Bse8I GATNNNNATC 1 cut(s) 1597
BseDI CCNNGG 3 cut(s) 38, 146, 219
BseGI GGATG 6 cut(s) 205, 235, 740, 1011, 1089, 1335
BseJI GATNNNNATC 1 cut(s) 1597
BseLI CCNNNNNNNGG 6 cut(s) 114, 211, 225, 271, 1021, 1046
BseMI GCAATG 4 cut(s) 279, 477, 824, 1072
BseMII CTCAG 5 cut(s) 97, 294, 375, 823, 1386
BseNI ACTGG 4 cut(s) 1025, 1267, 1316, 1560
BseXI GCAGC 2 cut(s) 271, 1327
BseYI CCCAGC 2 cut(s) 429, 1185
Bsh1236I CGCG 1 cut(s) 22
BshFI GGCC 2 cut(s) 1315, 1423
BshTI ACCGGT 1 cut(s) 447
BsiHKAI GWGCWC 2 cut(s) 93, 358
BsiSI CCGG 5 cut(s) 114, 146, 159, 269, 448
BslFI GGGAC 2 cut(s) 289, 1371
BslI CCNNNNNNNGG 6 cut(s) 114, 211, 225, 271, 1021, 1046
BsmAI GTCTC 1 cut(s) 107
BsmFI GGGAC 2 cut(s) 289, 1371
BsnI GGCC 2 cut(s) 1315, 1423
Bso31I GGTCTC 1 cut(s) 107
Bsp1286I GDGCHC 3 cut(s) 93, 204, 358
Bsp143I GATC 8 cut(s) 292, 322, 748, 1168, 1270, 1528, 1548, 1592
BspACI CCGC 3 cut(s) 22, 638, 1211
BspANI GGCC 2 cut(s) 1315, 1423
BspCNI CTCAG 5 cut(s) 96, 295, 376, 822, 1387
BspFNI CGCG 1 cut(s) 22
BspHI TCATGA 2 cut(s) 496, 1243
BspLI GGNNCC 1 cut(s) 277
BspMAI CTGCAG 1 cut(s) 982
BspPI GGATC 3 cut(s) 1176, 1265, 1523
BspTI CTTAAG 1 cut(s) 889
BspTNI GGTCTC 1 cut(s) 107
BsrDI GCAATG 4 cut(s) 279, 477, 824, 1072
BsrFI RCCGGY 2 cut(s) 268, 447
BsrI ACTGG 4 cut(s) 1025, 1267, 1316, 1560
BssAI RCCGGY 2 cut(s) 268, 447
BssECI CCNNGG 3 cut(s) 38, 146, 219
BssMI GATC 8 cut(s) 292, 322, 748, 1168, 1270, 1528, 1548, 1592
Bst4CI ACNGT 1 cut(s) 950
Bst6I CTCTTC 3 cut(s) 957, 1185, 1554
BstAFI CTTAAG 1 cut(s) 889
BstBAI YACGTR 1 cut(s) 1046
BstC8I GCNNGC 7 cut(s) 89, 477, 481, 885, 1183, 1345, 1392
BstDEI CTNAG 7 cut(s) 83, 127, 303, 384, 809, 1275, 1395
BstF5I GGATG 6 cut(s) 205, 235, 740, 1011, 1089, 1335
BstFNI CGCG 1 cut(s) 22
BstH2I RGCGCY 1 cut(s) 809
BstHHI GCGC 2 cut(s) 728, 808
BstKTI GATC 8 cut(s) 295, 325, 751, 1171, 1273, 1531, 1551, 1595
BstMAI GTCTC 1 cut(s) 107
BstMBI GATC 8 cut(s) 292, 322, 748, 1168, 1270, 1528, 1548, 1592
BstMWI GCNNNNNNNGC 4 cut(s) 230, 476, 660, 1576
BstNSI RCATGY 2 cut(s) 887, 904
BstSCI CCNGG 2 cut(s) 113, 145
BstSFI CTRYAG 1 cut(s) 978
BstUI CGCG 1 cut(s) 22
BstV1I GCAGC 2 cut(s) 271, 1327
BstV2I GAAGAC 2 cut(s) 416, 518
BstX2I RGATCY 2 cut(s) 1168, 1528
BstYI RGATCY 2 cut(s) 1168, 1528
BsuRI GGCC 2 cut(s) 1315, 1423
BtsCI GGATG 6 cut(s) 205, 235, 740, 1011, 1089, 1335
BtsI GCAGTG 1 cut(s) 975
BtsIMutI CAGTG 3 cut(s) 975, 1323, 1553
Cac8I GCNNGC 7 cut(s) 89, 477, 481, 885, 1183, 1345, 1392
CciI TCATGA 2 cut(s) 496, 1243
CfoI GCGC 2 cut(s) 728, 808
Cfr10I RCCGGY 2 cut(s) 268, 447
Cfr13I GGNCC 3 cut(s) 63, 156, 276
Csp6I GTAC 2 cut(s) 347, 1477
CspAI ACCGGT 1 cut(s) 447
CviAII CATG 7 cut(s) 296, 497, 527, 884, 901, 1244, 1485
CviQI GTAC 2 cut(s) 347, 1477
DdeI CTNAG 7 cut(s) 83, 127, 303, 384, 809, 1275, 1395
DpnI GATC 8 cut(s) 294, 324, 750, 1170, 1272, 1530, 1550, 1594
DpnII GATC 8 cut(s) 292, 322, 748, 1168, 1270, 1528, 1548, 1592
DraIII CACNNNGTG 1 cut(s) 1049
DriI GACNNNNNGTC 2 cut(s) 76, 684
EaeI YGGCCR 2 cut(s) 1313, 1421
Eam1104I CTCTTC 3 cut(s) 957, 1185, 1554
Eam1105I GACNNNNNGTC 2 cut(s) 76, 684
EarI CTCTTC 3 cut(s) 957, 1185, 1554
EciI GGCGGA 1 cut(s) 653
Ecl136II GAGCTC 1 cut(s) 91
Eco24I GRGCYC 2 cut(s) 93, 204
Eco31I GGTCTC 1 cut(s) 107
Eco32I GATATC 1 cut(s) 1502
Eco47I GGWCC 3 cut(s) 63, 156, 276
Eco53kI GAGCTC 1 cut(s) 91
Eco57I CTGAAG 2 cut(s) 401, 981
Eco72I CACGTG 1 cut(s) 1046
EcoICRI GAGCTC 1 cut(s) 91
EcoO109I RGGNCCY 1 cut(s) 63
EcoRV GATATC 1 cut(s) 1502
EcoT38I GRGCYC 2 cut(s) 93, 204
FaeI CATG 7 cut(s) 299, 500, 530, 887, 904, 1247, 1488
FaqI GGGAC 2 cut(s) 289, 1371
FatI CATG 7 cut(s) 295, 496, 526, 883, 900, 1243, 1484
FauNDI CATATG 1 cut(s) 289
FbaI TGATCA 2 cut(s) 292, 322
Fnu4HI GCNGC 4 cut(s) 23, 285, 1211, 1341
FokI GGATG 6 cut(s) 192, 242, 747, 998, 1096, 1342
FriOI GRGCYC 2 cut(s) 93, 204
Fsp4HI GCNGC 4 cut(s) 23, 285, 1211, 1341
FspBI CTAG 2 cut(s) 1445, 1523
GlaI GCGC 2 cut(s) 727, 807
GluI GCNGC 4 cut(s) 23, 285, 1211, 1341
GsaI CCCAGC 2 cut(s) 433, 1189
HaeII RGCGCY 1 cut(s) 809
HaeIII GGCC 2 cut(s) 1315, 1423
HapII CCGG 5 cut(s) 114, 146, 159, 269, 448
HhaI GCGC 2 cut(s) 728, 808
Hin1II CATG 7 cut(s) 299, 500, 530, 887, 904, 1247, 1488
Hin6I GCGC 2 cut(s) 726, 806
HinP1I GCGC 2 cut(s) 726, 806
HincII GTYRAC 2 cut(s) 571, 618
HindII GTYRAC 2 cut(s) 571, 618
HindIII AAGCTT 3 cut(s) 455, 481, 668
HinfI GANTC 6 cut(s) 572, 679, 1007, 1072, 1399, 1415
HpaII CCGG 5 cut(s) 114, 146, 159, 269, 448
HphI GGTGA 2 cut(s) 389, 551
Hpy166II GTNNAC 4 cut(s) 183, 571, 618, 1605
Hpy188I TCNGA 5 cut(s) 260, 304, 510, 694, 812
Hpy188III TCNNGA 6 cut(s) 29, 406, 497, 1004, 1244, 1497
Hpy8I GTNNAC 4 cut(s) 183, 571, 618, 1605
Hpy99I CGWCG 1 cut(s) 243
HpyAV CCTTC 5 cut(s) 147, 425, 458, 689, 839
HpyCH4III ACNGT 1 cut(s) 950
HpyCH4IV ACGT 1 cut(s) 1045
HpyF10VI GCNNNNNNNGC 4 cut(s) 230, 476, 660, 1576
HpyF3I CTNAG 7 cut(s) 83, 127, 303, 384, 809, 1275, 1395
HpySE526I ACGT 1 cut(s) 1045
Hsp92II CATG 7 cut(s) 299, 500, 530, 887, 904, 1247, 1488
HspAI GCGC 2 cut(s) 726, 806
Ksp22I TGATCA 2 cut(s) 292, 322
Kzo9I GATC 8 cut(s) 292, 322, 748, 1168, 1270, 1528, 1548, 1592
LmnI GCTCC 3 cut(s) 568, 603, 1290
Lsp1109I GCAGC 2 cut(s) 271, 1327
LweI GCATC 5 cut(s) 220, 672, 725, 1320, 1509
MaeI CTAG 2 cut(s) 1445, 1523
MaeII ACGT 1 cut(s) 1045
MaeIII GTNAC 5 cut(s) 78, 338, 893, 908, 1258
MalI GATC 8 cut(s) 294, 324, 750, 1170, 1272, 1530, 1550, 1594
MboI GATC 8 cut(s) 292, 322, 748, 1168, 1270, 1528, 1548, 1592
MboII GAAGA 9 cut(s) 247, 421, 485, 523, 974, 1122, 1202, 1538, 1571
MfeI CAATTG 3 cut(s) 549, 1233, 1383
MflI RGATCY 2 cut(s) 1168, 1528
MhlI GDGCHC 3 cut(s) 93, 204, 358
MlsI TGGCCA 2 cut(s) 1315, 1423
MluNI TGGCCA 2 cut(s) 1315, 1423
MlyI GAGTC 4 cut(s) 566, 673, 1081, 1408
MmeI TCCRAC 2 cut(s) 99, 952
Mox20I TGGCCA 2 cut(s) 1315, 1423
MscI TGGCCA 2 cut(s) 1315, 1423
MseI TTAA 4 cut(s) 51, 890, 935, 1350
MslI CAYNNNNRTG 1 cut(s) 1600
Msp20I TGGCCA 2 cut(s) 1315, 1423
MspCI CTTAAG 1 cut(s) 889
MspI CCGG 5 cut(s) 114, 146, 159, 269, 448
MspR9I CCNGG 2 cut(s) 115, 147
MunI CAATTG 3 cut(s) 549, 1233, 1383
MvnI CGCG 1 cut(s) 22
MwoI GCNNNNNNNGC 4 cut(s) 230, 476, 660, 1576
NciI CCSGG 2 cut(s) 115, 147
NdeI CATATG 1 cut(s) 289
NdeII GATC 8 cut(s) 292, 322, 748, 1168, 1270, 1528, 1548, 1592
NlaIII CATG 7 cut(s) 299, 500, 530, 887, 904, 1247, 1488
NlaIV GGNNCC 1 cut(s) 277
NmeAIII GCCGAG 2 cut(s) 63, 244
NmuCI GTSAC 2 cut(s) 78, 338
NspI RCATGY 2 cut(s) 887, 904
PaeI GCATGC 1 cut(s) 887
PagI TCATGA 2 cut(s) 496, 1243
PfeI GAWTC 2 cut(s) 1007, 1415
PflFI GACNNNGTC 1 cut(s) 1486
PflMI CCANNNNNTGG 2 cut(s) 211, 271
PinAI ACCGGT 1 cut(s) 447
PkrI GCNGC 4 cut(s) 24, 286, 1212, 1342
PleI GAGTC 4 cut(s) 566, 673, 1080, 1407
PmaCI CACGTG 1 cut(s) 1046
PmlI CACGTG 1 cut(s) 1046
PpsI GAGTC 4 cut(s) 566, 673, 1080, 1407
Ppu21I YACGTR 1 cut(s) 1046
PpuMI RGGWCCY 1 cut(s) 63
PsiI TTATAA 1 cut(s) 954
Psp124BI GAGCTC 1 cut(s) 93
Psp5II RGGWCCY 1 cut(s) 63
PspCI CACGTG 1 cut(s) 1046
PspFI CCCAGC 2 cut(s) 429, 1185
PspN4I GGNNCC 1 cut(s) 277
PspPI GGNCC 3 cut(s) 63, 156, 276
PspPPI RGGWCCY 1 cut(s) 63
PstI CTGCAG 1 cut(s) 982
PsuI RGATCY 2 cut(s) 1168, 1528
PsyI GACNNNGTC 1 cut(s) 1486
RsaI GTAC 2 cut(s) 348, 1478
RsaNI GTAC 2 cut(s) 347, 1477
RseI CAYNNNNRTG 1 cut(s) 1600
SacI GAGCTC 1 cut(s) 93
SaqAI TTAA 4 cut(s) 51, 890, 935, 1350
SatI GCNGC 4 cut(s) 23, 285, 1211, 1341
Sau3AI GATC 8 cut(s) 292, 322, 748, 1168, 1270, 1528, 1548, 1592
Sau96I GGNCC 3 cut(s) 63, 156, 276
SchI GAGTC 4 cut(s) 566, 673, 1081, 1408
ScrFI CCNGG 2 cut(s) 115, 147
SduI GDGCHC 3 cut(s) 93, 204, 358
SfaNI GCATC 5 cut(s) 220, 672, 725, 1320, 1509
SfcI CTRYAG 1 cut(s) 978
SinI GGWCC 3 cut(s) 63, 156, 276
SmiMI CAYNNNNRTG 1 cut(s) 1600
SmlI CTYRAG 1 cut(s) 889
SmoI CTYRAG 1 cut(s) 889
SphI GCATGC 1 cut(s) 887
SsiI CCGC 3 cut(s) 22, 638, 1211
SspI AATATT 1 cut(s) 1430
SspMI CTAG 2 cut(s) 1445, 1523
SstI GAGCTC 1 cut(s) 93
StyD4I CCNGG 2 cut(s) 113, 145
TaaI ACNGT 1 cut(s) 950
TaiI ACGT 1 cut(s) 1048
TaqI TCGA 1 cut(s) 165
TaqII GACCGA 1 cut(s) 879
TauI GCSGC 2 cut(s) 25, 1213
TfiI GAWTC 2 cut(s) 1007, 1415
Tru1I TTAA 4 cut(s) 51, 890, 935, 1350
Tru9I TTAA 4 cut(s) 51, 890, 935, 1350
TscAI CASTG 3 cut(s) 982, 1323, 1560
TseFI GTSAC 2 cut(s) 78, 338
TseI GCWGC 2 cut(s) 284, 1340
Tsp45I GTSAC 2 cut(s) 78, 338
TspDTI ATGAA 3 cut(s) 386, 485, 1589
TspGWI ACGGA 2 cut(s) 227, 590
TspRI CASTG 3 cut(s) 982, 1323, 1560
Tth111I GACNNNGTC 1 cut(s) 1486
Van91I CCANNNNNTGG 2 cut(s) 211, 271
Vha464I CTTAAG 1 cut(s) 889
VpaK11BI GGWCC 3 cut(s) 63, 156, 276
XapI RAATTY 3 cut(s) 783, 854, 867
XceI RCATGY 2 cut(s) 887, 904
XcmI CCANNNNNNNNNTGG 3 cut(s) 115, 533, 1323
XspI CTAG 2 cut(s) 1445, 1523
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.