MD09G1003000.v1.1

Ring finger protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr09
OG0006714
Physical Location & Seq
Forward (+)
312538 .. 316327
3790 bp
Loading structure...
UTR
Exon/CDS
Intron
MD09G1003000.v1.1.491

Sequence Viewer

Length: 2220 bp
ATGTCCATCTTGCCCAACCAAGACCAAGGATCTATATCGTCATCTGCCTCTTCAGCTCCCTCTGTAAACCCTAACTCCCAACATGGACACCGCCACCGTCACCTTTCCCTTTCTCAATCTCAGCCCCAGTCGCTGTCTCCGCCGGATCCCTCCCGCCAAATTCTCGCATTTGGATCGCTTCGGATCTCCGACTCTCAATCTAGCTCCTCCGCTACTGGAGGCCTATCACCACCGGCACCAGCTGCAGAAGATTCTGGTGGATCTTCCCAGCAGGTGAACGAGTTAGGGATGCCCGGGGGTAACAAGACTTTACCTAATAACCACCACGAGACACATTCACAGTGCCACTCTGGTGGAGGTGGACGAGGGGTTGGATCACCCTGGTCTAGAGGGAAAAGATCAGGAACCTTTGGTTCTGGTTCAACTGAACAAAGTATCGGGTCTGCTGCTTCTCATGGAAACTCCACTCATCAAACAGGAAGGAAAGCCCAGCTGATGAATGGCAACCACTTGTTGAATTTTTATTATGACCCCATAGCTCGTCCTCAGCGTAGAGCTGCTGCTCCTCCTCCTCCAAGAAGGCAGCACAAGAGGAAGCCTTACAACAAAGATTTATTTCTTCAGGCTAACTACAAATTTGTGGTGTTAGATTCAGGAAACTACTCAGCTGAATCGATGGATCCAGATAAGATGTTACAATGGGAGGACATCATTTGCGTGAGATATTCCACCCCAACTGTGGTTCAGTGTCCCATTTGTCTGGAATATCCTCTTTGTCCGCAGATAACCTCATGTGGACATATTTTCTGTTTCCCATGTATTCTGCAATACTTGCTGATGGGGAAGGAGGATCATAAAGGAGACTGCTGGAAAAGATGCCCCTTGTGTTTTGTGATGATATCACCTAAGGATTTGTACACTCTATTTGTGGAGAATGTCAAGCAGTATTGTGTTGGTGATACAATAGAGTTTATGCTTCTTAGTCGACAAAAGGATTCATTTACTTTATCCCATAAAAGTAAACAAGAGAAAGATGCCGTTGGAGGTTGTGATGATGAAAACTATGATCCCTTTTCAAAGTTTACATTTACATCAGATGTAGATCTTTCAGTCAGAAAAGCGATATCAGAGTTAGATGGTTGGTTGGTCAGGGCAGAGTCGGGGCTTGTTGATGACATAGAGAAGCTTCCATATGTATGTGCTGCAATGGAACAATTAGAACAGAGGAAGAAATATTGGAACGAGCACCGGGCTAGCGACAGTAATAAATCTTGTATATATAATGATCATAATAGTGGTTCTATCTTGTCAACTGAAAAATCTGCAAATGGTAACACTGAAGCATCTACATTTGGACATGCAAATCCATCCAATGAAGTCTATGACCGTAATAAGCGTTCAGACAATTTATCTCTGGAGAAGTCGGATGATGGGACTTGTTCAGACAACTCTGTGGATGCAGCTGAATCATTGGAAGGCCATGAAAATGTTTTGTCTTCTTCATATGATGAAAGCAAGGGTGCCCGAGGGGACTCACATGACTCTGGAATTGTAAAGGAGAAGGAATCATACAATTTCTACCAGGCTGCTGATGGTCAGCACATCATTCTTCATCCATTGAACATGAAATGCCTGCTACACCACTATGGGAGCCATGATATGCTACCATACAGGATAAGTGGAAAAATTTTGCAATTGGAGACAGTGACTCAGACAGAAGCTATGAGGAGGCGCTACCGCTACTTGAGTCATTTTTCTTTAACAACAATACTCCAGTTTTGTGAGATTGATCTGAGTGAGGTATTGTCTCCTGATGCCTTGTCTCCCTTTATGGAAGACATAAAGAAGCGTGAAAAGCAGAGGAAACAACTTGCTAGGAAGGAGCAAAGGGAGAAAATGAAAGCTGAATCTACCGTGGCATATCCCATCCCCATAGTAGCAGGTTATGGACAGTCCTTTCATGATGGATCCCCTACATTCTCCATGGATGACTTCGAGGCTTTGGGAAGTTCTACAGCGACATCGTCGAGTTCTCCTGTTGTTGGGGAAAGGAAGCTCTTCTCAAGTGTTACAAGGCTTGGTTTTGCTGCTGCGCATGATTCTCCGGCCCTGAAACTAGAAGGAACCAGTTCTCTGAATGGAGATGGTGCAGGGAGAGTCTCTCCCAAGACAAATGGTATATATCAAAATCTTGTTATACAGGTTGCTTTTTGTGCTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
zf-C3HC4

Protein Analysis

740

Amino Acids

81.34

Weight (kDa)

6.41

Isoelectric Point (pI)

58.65

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
zf-C3HC4 PF00097 250 - 296 6e-06 Zinc finger, C3HC4 type (RING finger)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 262
Acc16I TGCGCA 1 cut(s) 2094
Acc36I ACCTGC 2 cut(s) 262, 1931
AccB1I GGYRCC 2 cut(s) 235, 1520
AccI GTMKAC 1 cut(s) 985
AciI CCGC 6 cut(s) 91, 140, 154, 210, 779, 1738
AcsI RAATTY 4 cut(s) 159, 517, 635, 1686
AcuI CTGAAG 3 cut(s) 36, 605, 1359
AfaI GTAC 1 cut(s) 917
AfiI CCNNNNNNNGG 2 cut(s) 739, 2042
AgsI TTSAA 4 cut(s) 423, 517, 1077, 1621
AjnI CCWGG 2 cut(s) 380, 1581
AleI CACNNNNGTG 1 cut(s) 351
Alw21I GWGCWC 1 cut(s) 1248
Alw26I GTCTC 7 cut(s) 141, 323, 855, 1694, 1812, 1827, 2164
AlwNI CAGNNNCTG 1 cut(s) 133
Ama87I CYCGRG 2 cut(s) 293, 1524
AoxI GGCC 3 cut(s) 220, 1477, 2106
ApoI RAATTY 4 cut(s) 159, 517, 635, 1686
Asp700I GAANNNNTTC 2 cut(s) 2057, 2128
AspLEI GCGC 2 cut(s) 1734, 2095
AspS9I GGNCC 1 cut(s) 2107
AsuC2I CCSGG 3 cut(s) 294, 295, 1250
AsuHPI GGTGA 6 cut(s) 92, 219, 286, 369, 894, 968
AsuNHI GCTAGC 1 cut(s) 1253
AvaI CYCGRG 2 cut(s) 293, 1524
AxyI CCTNAGG 1 cut(s) 906
BaeGI GKGCMC 1 cut(s) 1525
BamHI GGATCC 3 cut(s) 145, 679, 1967
BanI GGYRCC 2 cut(s) 235, 1520
BarI GAAGNNNNNNTAC 2 cut(s) 1553, 1585
BauI CACGAG 1 cut(s) 326
BbsI GAAGAC 2 cut(s) 1488, 1842
Bbv12I GWGCWC 1 cut(s) 1248
BbvCI CCTCAGC 1 cut(s) 546
BceAI ACGGC 1 cut(s) 1022
BcgI CGANNNNNNTGC 2 cut(s) 156, 190
BciT130I CCWGG 2 cut(s) 382, 1583
BclI TGATCA 1 cut(s) 1285
BcnI CCSGG 3 cut(s) 294, 295, 1250
BcoDI GTCTC 7 cut(s) 141, 323, 855, 1694, 1812, 1827, 2164
BfaI CTAG 5 cut(s) 201, 387, 1254, 1875, 2117
BfmI CTRYAG 2 cut(s) 243, 2013
BfoI RGCGCY 1 cut(s) 1735
BfuAI ACCTGC 2 cut(s) 262, 1931
BglII AGATCT 1 cut(s) 1102
Bme1390I CCNGG 5 cut(s) 294, 295, 382, 1250, 1583
BmeT110I CYCGRG 2 cut(s) 293, 1524
BmgT120I GGNCC 1 cut(s) 2107
BmiI GGNNCC 8 cut(s) 147, 237, 406, 681, 1522, 1652, 1969, 2125
BmrFI CCNGG 5 cut(s) 294, 295, 382, 1250, 1583
BmrI ACTGGG 1 cut(s) 121
BmsI GCATC 6 cut(s) 279, 866, 1024, 1352, 1447, 1804
BmtI GCTAGC 1 cut(s) 1257
BmuI ACTGGG 1 cut(s) 121
BpiI GAAGAC 2 cut(s) 1488, 1842
BplI GAGNNNNNCTC 2 cut(s) 2146, 2178
BpmI CTGGAG 3 cut(s) 237, 1436, 1757
Bpu10I CCTNAGC 1 cut(s) 546
BpuEI CTTGAG 2 cut(s) 1765, 2047
BpuMI CCSGG 3 cut(s) 294, 295, 1250
Bsa29I ATCGAT 1 cut(s) 674
BsaBI GATNNNNATC 2 cut(s) 34, 1101
BsaJI CCNNGG 7 cut(s) 25, 293, 294, 380, 1525, 1914, 1983
BsaXI ACNNNNNCTCC 2 cut(s) 59, 89
Bsc4I CCNNNNNNNGG 2 cut(s) 739, 2042
Bse118I RCCGGY 1 cut(s) 232
Bse1I ACTGG 4 cut(s) 127, 220, 1774, 2127
Bse21I CCTNAGG 1 cut(s) 906
Bse3DI GCAATG 1 cut(s) 1212
Bse8I GATNNNNATC 2 cut(s) 34, 1101
BseBI CCWGG 2 cut(s) 382, 1583
BseCI ATCGAT 1 cut(s) 674
BseDI CCNNGG 7 cut(s) 25, 293, 294, 380, 1525, 1914, 1983
BseGI GGATG 7 cut(s) 294, 1367, 1432, 1462, 1612, 1926, 1993
BseJI GATNNNNATC 2 cut(s) 34, 1101
BseLI CCNNNNNNNGG 2 cut(s) 739, 2042
BseMI GCAATG 1 cut(s) 1212
BseMII CTCAG 5 cut(s) 134, 560, 678, 1724, 1784
BseNI ACTGG 4 cut(s) 127, 220, 1774, 2127
BseRI GAGGAG 5 cut(s) 196, 555, 558, 561, 1741
BseSI GKGCMC 1 cut(s) 1525
BseYI CCCAGC 2 cut(s) 267, 489
BsgI GTGCAG 1 cut(s) 2169
BshFI GGCC 3 cut(s) 222, 1479, 2108
BshNI GGYRCC 2 cut(s) 235, 1520
BshVI ATCGAT 1 cut(s) 674
BsiHKAI GWGCWC 1 cut(s) 1248
BsiHKCI CYCGRG 2 cut(s) 293, 1524
BsiSI CCGG 5 cut(s) 143, 233, 294, 1249, 2105
BslFI GGGAC 3 cut(s) 735, 1447, 1544
BslI CCNNNNNNNGG 2 cut(s) 739, 2042
BsmAI GTCTC 7 cut(s) 141, 323, 855, 1694, 1812, 1827, 2164
BsmFI GGGAC 3 cut(s) 735, 1447, 1544
BsnI GGCC 3 cut(s) 222, 1479, 2108
BsoBI CYCGRG 2 cut(s) 293, 1524
Bsp1286I GDGCHC 2 cut(s) 1248, 1525
Bsp1407I TGTACA 1 cut(s) 915
Bsp19I CCATGG 1 cut(s) 1983
BspACI CCGC 6 cut(s) 91, 140, 154, 210, 779, 1738
BspANI GGCC 3 cut(s) 222, 1479, 2108
BspCNI CTCAG 5 cut(s) 133, 559, 677, 1723, 1785
BspDI ATCGAT 1 cut(s) 674
BspHI TCATGA 1 cut(s) 1960
BspLI GGNNCC 8 cut(s) 147, 237, 406, 681, 1522, 1652, 1969, 2125
BspMAI CTGCAG 1 cut(s) 247
BspMI ACCTGC 2 cut(s) 262, 1931
BspOI GCTAGC 1 cut(s) 1257
BspQI GCTCTTC 1 cut(s) 2063
BspT107I GGYRCC 2 cut(s) 235, 1520
BsrDI GCAATG 1 cut(s) 1212
BsrFI RCCGGY 1 cut(s) 232
BsrGI TGTACA 1 cut(s) 915
BsrI ACTGG 4 cut(s) 127, 220, 1774, 2127
BssAI RCCGGY 1 cut(s) 232
BssECI CCNNGG 7 cut(s) 25, 293, 294, 380, 1525, 1914, 1983
BssSI CACGAG 1 cut(s) 326
BssT1I CCWWGG 2 cut(s) 25, 1983
Bst2BI CACGAG 1 cut(s) 326
Bst2UI CCWGG 2 cut(s) 382, 1583
Bst4CI ACNGT 8 cut(s) 98, 342, 739, 1262, 1388, 1705, 1915, 1953
Bst6I CTCTTC 2 cut(s) 55, 2063
BstAPI GCANNNNNTGC 2 cut(s) 242, 832
BstAUI TGTACA 1 cut(s) 915
BstC8I GCNNGC 2 cut(s) 1255, 1634
BstDEI CTNAG 7 cut(s) 120, 546, 664, 906, 980, 1710, 1793
BstDSI CCRYGG 2 cut(s) 1914, 1983
BstF5I GGATG 7 cut(s) 294, 1367, 1432, 1462, 1612, 1926, 1993
BstH2I RGCGCY 1 cut(s) 1735
BstHHI GCGC 2 cut(s) 1734, 2095
BstMAI GTCTC 7 cut(s) 141, 323, 855, 1694, 1812, 1827, 2164
BstMWI GCNNNNNNNGC 7 cut(s) 53, 130, 139, 242, 832, 1855, 2213
BstNI CCWGG 2 cut(s) 382, 1583
BstNSI RCATGY 1 cut(s) 1361
BstSCI CCNGG 5 cut(s) 292, 293, 380, 1248, 1581
BstSFI CTRYAG 2 cut(s) 243, 2013
BstSLI GKGCMC 1 cut(s) 1525
BstV2I GAAGAC 2 cut(s) 1488, 1842
BstX2I RGATCY 7 cut(s) 29, 145, 183, 260, 679, 1102, 1967
BstXI CCANNNNNNTGG 2 cut(s) 353, 760
BstYI RGATCY 7 cut(s) 29, 145, 183, 260, 679, 1102, 1967
Bsu15I ATCGAT 1 cut(s) 674
Bsu36I CCTNAGG 1 cut(s) 906
BsuRI GGCC 3 cut(s) 222, 1479, 2108
BsuTUI ATCGAT 1 cut(s) 674
BtgI CCRYGG 2 cut(s) 1914, 1983
BtsCI GGATG 7 cut(s) 294, 1367, 1432, 1462, 1612, 1926, 1993
BtsIMutI CAGTG 4 cut(s) 347, 752, 1335, 1710
BveI ACCTGC 2 cut(s) 262, 1931
Cac8I GCNNGC 2 cut(s) 1255, 1634
CaiI CAGNNNCTG 1 cut(s) 133
CciI TCATGA 1 cut(s) 1960
CfoI GCGC 2 cut(s) 1734, 2095
Cfr10I RCCGGY 1 cut(s) 232
Cfr13I GGNCC 1 cut(s) 2107
Cfr9I CCCGGG 1 cut(s) 293
ClaI ATCGAT 1 cut(s) 674
Csp6I GTAC 1 cut(s) 916
CviQI GTAC 1 cut(s) 916
DdeI CTNAG 7 cut(s) 120, 546, 664, 906, 980, 1710, 1793
Eam1104I CTCTTC 2 cut(s) 55, 2063
EarI CTCTTC 2 cut(s) 55, 2063
EciI GGCGGA 1 cut(s) 129
Eco130I CCWWGG 2 cut(s) 25, 1983
Eco147I AGGCCT 1 cut(s) 222
Eco32I GATATC 2 cut(s) 900, 1125
Eco57I CTGAAG 3 cut(s) 36, 605, 1359
Eco81I CCTNAGG 1 cut(s) 906
Eco88I CYCGRG 2 cut(s) 293, 1524
EcoRII CCWGG 2 cut(s) 380, 1581
EcoRV GATATC 2 cut(s) 900, 1125
EcoT14I CCWWGG 2 cut(s) 25, 1983
ErhI CCWWGG 2 cut(s) 25, 1983
FaqI GGGAC 3 cut(s) 735, 1447, 1544
FauI CCCGC 1 cut(s) 161
FauNDI CATATG 2 cut(s) 1192, 1504
FbaI TGATCA 1 cut(s) 1285
FblI GTMKAC 1 cut(s) 985
FokI GGATG 7 cut(s) 301, 1354, 1439, 1469, 1599, 1913, 2000
FspBI CTAG 5 cut(s) 201, 387, 1254, 1875, 2117
FspI TGCGCA 1 cut(s) 2094
GlaI GCGC 2 cut(s) 1733, 2094
GsaI CCCAGC 2 cut(s) 271, 493
GsuI CTGGAG 3 cut(s) 237, 1436, 1757
HaeII RGCGCY 1 cut(s) 1735
HaeIII GGCC 3 cut(s) 222, 1479, 2108
HapII CCGG 5 cut(s) 143, 233, 294, 1249, 2105
HhaI GCGC 2 cut(s) 1734, 2095
Hin6I GCGC 2 cut(s) 1732, 2093
HinP1I GCGC 2 cut(s) 1732, 2093
HincII GTYRAC 2 cut(s) 986, 1311
HindII GTYRAC 2 cut(s) 986, 1311
HindIII AAGCTT 1 cut(s) 1184
HpaII CCGG 5 cut(s) 143, 233, 294, 1249, 2105
HphI GGTGA 6 cut(s) 92, 219, 286, 369, 894, 968
Hpy166II GTNNAC 9 cut(s) 67, 277, 362, 797, 918, 986, 1022, 1083, 1311
Hpy188III TCNNGA 9 cut(s) 387, 402, 654, 683, 761, 1415, 1545, 1811, 1961
Hpy8I GTNNAC 9 cut(s) 67, 277, 362, 797, 918, 986, 1022, 1083, 1311
Hpy99I CGWCG 1 cut(s) 2029
HpyAV CCTTC 7 cut(s) 474, 573, 838, 1469, 1555, 1873, 2114
HpyCH4III ACNGT 8 cut(s) 98, 342, 739, 1262, 1388, 1705, 1915, 1953
HpyCH4V TGCA 8 cut(s) 245, 826, 1205, 1325, 1361, 1460, 1693, 2150
HpyF10VI GCNNNNNNNGC 7 cut(s) 53, 130, 139, 242, 832, 1855, 2213
HpyF3I CTNAG 7 cut(s) 120, 546, 664, 906, 980, 1710, 1793
HspAI GCGC 2 cut(s) 1732, 2093
Ksp22I TGATCA 1 cut(s) 1285
LguI GCTCTTC 1 cut(s) 2063
LmnI GCTCC 5 cut(s) 61, 209, 568, 1650, 1882
LweI GCATC 6 cut(s) 279, 866, 1024, 1352, 1447, 1804
MaeI CTAG 5 cut(s) 201, 387, 1254, 1875, 2117
MaeIII GTNAC 6 cut(s) 98, 299, 693, 1331, 1705, 2068
MfeI CAATTG 1 cut(s) 1694
MflI RGATCY 7 cut(s) 29, 145, 183, 260, 679, 1102, 1967
MhlI GDGCHC 2 cut(s) 1248, 1525
MluCI AATT 9 cut(s) 159, 517, 635, 1214, 1405, 1548, 1573, 1686, 1694
MlyI GAGTC 7 cut(s) 185, 1166, 1526, 1535, 1702, 1756, 2166
MmeI TCCRAC 4 cut(s) 213, 352, 1021, 1404
MroXI GAANNNNTTC 2 cut(s) 2057, 2128
MseI TTAA 1 cut(s) 1760
MslI CAYNNNNRTG 6 cut(s) 351, 716, 1195, 1293, 1485, 1644
MspA1I CMGCKG 4 cut(s) 242, 493, 668, 1463
MspI CCGG 5 cut(s) 143, 233, 294, 1249, 2105
MspR9I CCNGG 5 cut(s) 294, 295, 382, 1250, 1583
MunI CAATTG 1 cut(s) 1694
MvaI CCWGG 2 cut(s) 382, 1583
MwoI GCNNNNNNNGC 7 cut(s) 53, 130, 139, 242, 832, 1855, 2213
NciI CCSGG 3 cut(s) 294, 295, 1250
NcoI CCATGG 1 cut(s) 1983
NdeI CATATG 2 cut(s) 1192, 1504
NheI GCTAGC 1 cut(s) 1253
NlaIV GGNNCC 8 cut(s) 147, 237, 406, 681, 1522, 1652, 1969, 2125
NmuCI GTSAC 2 cut(s) 98, 1705
NsbI TGCGCA 1 cut(s) 2094
NspI RCATGY 1 cut(s) 1361
OliI CACNNNNGTG 1 cut(s) 351
PagI TCATGA 1 cut(s) 1960
PaqCI CACCTGC 1 cut(s) 262
PceI AGGCCT 1 cut(s) 222
PciSI GCTCTTC 1 cut(s) 2063
PcsI WCGNNNNNNNCGW 1 cut(s) 547
PdmI GAANNNNTTC 2 cut(s) 2057, 2128
PfeI GAWTC 8 cut(s) 251, 650, 671, 995, 1466, 1565, 1907, 2099
PflFI GACNNNGTC 1 cut(s) 2023
PleI GAGTC 7 cut(s) 185, 1165, 1526, 1535, 1702, 1755, 2165
PpsI GAGTC 7 cut(s) 185, 1165, 1526, 1535, 1702, 1755, 2165
Psp6I CCWGG 2 cut(s) 380, 1581
PspFI CCCAGC 2 cut(s) 267, 489
PspGI CCWGG 2 cut(s) 380, 1581
PspN4I GGNNCC 8 cut(s) 147, 237, 406, 681, 1522, 1652, 1969, 2125
PspPI GGNCC 1 cut(s) 2107
PsrI GAACNNNNNNTAC 2 cut(s) 1381, 1413
PstI CTGCAG 1 cut(s) 247
PstNI CAGNNNCTG 1 cut(s) 133
PsuI RGATCY 7 cut(s) 29, 145, 183, 260, 679, 1102, 1967
PsyI GACNNNGTC 1 cut(s) 2023
PvuII CAGCTG 4 cut(s) 242, 493, 668, 1463
RsaI GTAC 1 cut(s) 917
RsaNI GTAC 1 cut(s) 916
RseI CAYNNNNRTG 6 cut(s) 351, 716, 1195, 1293, 1485, 1644
SalI GTCGAC 1 cut(s) 984
SapI GCTCTTC 1 cut(s) 2063
SaqAI TTAA 1 cut(s) 1760
Sau96I GGNCC 1 cut(s) 2107
SchI GAGTC 7 cut(s) 185, 1166, 1526, 1535, 1702, 1756, 2166
ScrFI CCNGG 5 cut(s) 294, 295, 382, 1250, 1583
SduI GDGCHC 2 cut(s) 1248, 1525
SfaNI GCATC 6 cut(s) 279, 866, 1024, 1352, 1447, 1804
SfcI CTRYAG 2 cut(s) 243, 2013
SmaI CCCGGG 1 cut(s) 295
SmiMI CAYNNNNRTG 6 cut(s) 351, 716, 1195, 1293, 1485, 1644
SmlI CTYRAG 2 cut(s) 1744, 2062
SmoI CTYRAG 2 cut(s) 1744, 2062
Sse9I AATT 9 cut(s) 159, 517, 635, 1214, 1405, 1548, 1573, 1686, 1694
SseBI AGGCCT 1 cut(s) 222
SsiI CCGC 6 cut(s) 91, 140, 154, 210, 779, 1738
SspI AATATT 1 cut(s) 1235
SspMI CTAG 5 cut(s) 201, 387, 1254, 1875, 2117
StuI AGGCCT 1 cut(s) 222
StyD4I CCNGG 5 cut(s) 292, 293, 380, 1248, 1581
StyI CCWWGG 2 cut(s) 25, 1983
TaaI ACNGT 8 cut(s) 98, 342, 739, 1262, 1388, 1705, 1915, 1953
TaqI TCGA 4 cut(s) 674, 985, 1995, 2027
TasI AATT 9 cut(s) 159, 517, 635, 1214, 1405, 1548, 1573, 1686, 1694
TatI WGTACW 1 cut(s) 915
TfiI GAWTC 8 cut(s) 251, 650, 671, 995, 1466, 1565, 1907, 2099
Tru1I TTAA 1 cut(s) 1760
Tru9I TTAA 1 cut(s) 1760
TscAI CASTG 4 cut(s) 347, 752, 1342, 1710
TseFI GTSAC 2 cut(s) 98, 1705
Tsp45I GTSAC 2 cut(s) 98, 1705
TspMI CCCGGG 1 cut(s) 293
TspRI CASTG 4 cut(s) 347, 752, 1342, 1710
Tth111I GACNNNGTC 1 cut(s) 2023
XapI RAATTY 4 cut(s) 159, 517, 635, 1686
XbaI TCTAGA 1 cut(s) 386
XceI RCATGY 1 cut(s) 1361
XcmI CCANNNNNNNNNTGG 3 cut(s) 497, 736, 1589
XmaI CCCGGG 1 cut(s) 293
XmiI GTMKAC 1 cut(s) 985
XmnI GAANNNNTTC 2 cut(s) 2057, 2128
XspI CTAG 5 cut(s) 201, 387, 1254, 1875, 2117
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.