RLG00000022415

Ring finger protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr4
OG0006714
Physical Location & Seq
Reverse (-)
83195181 .. 83198917
3737 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000022415

Sequence Viewer

Length: 2286 bp
ATGTCCATCTTGCCCAACCAAAGCCAAGGATCTAACTCGTCTTCTTCTTCTTCAATTCCCTCTGTAAACCCTAATTCCCAACATGGCCACCTGTTCCTATCCCAATCTCAGTCTCCATCTCAGTCCCCGCCCTCTCTCTCCCGCCAAATTCTCACATTTGGATCACTCGACATCTCCGACTCTCAGTCTCCCCTCTCTGTGTCTCCCGATTCTCCAGGCCCATCGCTACCAGCTGCACAAGGATCTTCCCAACAGGTGACGGAGTTAGGACTTCCTGGTAAGAATCTTTTGCCTAACCACGAGACACACTCCGGCTCCGGCTCCGGCTCCCGTGTAAGTGGACGAGGGGCTGGTTCATACCGGTCTAGAGGGAAAAGGCCTGGAAGCCAACAGAGTATCAGTAAGGTTGCTTCTCATGGAAACTCAACGCAACCAGCAGGAAGAAAACCCCAGATGACGAATGGCAACCACCTGTTGAATTTTCATTATGACCCCATTTCCCGTCCTCAGACTAGAGGTCCTCCTCCTCCTCCTCCTCCTCCTGCTAGAAGGCAGCATAAGAGAAAGCCCTACAACAAAGACTTATTTCTTCAGGCAAACTACAAATTTGTTGTGTTGGATTCGGGGAACTACTCAGCTGAATCAATGGATCCTGATAAGATGTTACAGTGGGAGGACATCATATGTGTGAGGTATTCCACCCCTACTGTGGTTCAGTGTCCAATTTGTTTGGAGTATCCTCTTTGTCCTCAGATAACCTCATGCGGACATATATTCTGTTTCCCATGCATTCTCCAATACCTGCTGATGGGGAAGGAGGATCATAAGGGTGACTGCTGGAAAAGATGCCCATTGTGTTTTGTCATGATATCACCCAAGGATTTATACACCCTCTTCGTGGAGAATGTTGAGCAGTATACTGTTGGTGATACTATGGAGTTTATGCTTCTTAGTCGACAAAAGGATTCATTTACCATATCCCATAAAAGTAAAAAGGAGAAAGATGCCATGTCAGGTTGTGATGATGAAAGTTATGATCCTTTTTCAAAGTTTACATTTACATCAGACGTAGATCTTTCAGTCAGAAAGGCAATATCAGAGCTAGATGCTTGGTTAGTCAGGGCAGAGTCAGGTCTTGTCGATGACCTGGAGAAGCTTCCATATGTATGTGCTGCAATGGAACAATTAGAACAGAGGAAGAAGTATTGGAATGAGCACCGGGCTATTGACAACAATAAAACTGGTTCGTCCGTTGTCTTGTCTACTGCAAATTCTACTAATGGTAACAGTGAAGCATCAATAATTGGGGATGGAACTTTGTCCAATGGTTTCGGTGACTTTAGTAAGTGTTCAGAGAATTTGTTAGTGGACAAGTCAGATGATGGGACTTCATCTGACCAATCTGTGGATCTGGCGGAATCATTGGAAGGCCATGAAAATGTTTTATCTTCTTCATATGATGAAAGCAAGACCGTCCAAGGGCACTCACGTTTCTCTGAAAGTGTAAAAGACAAGGACTCGTACAATTTCTACCAGGCTGCTGATGGTCAGCACATGATTCTTCATCCACTAAACATGAAATGTCTTCTCCACCATTATGGGAGCCATGATATGCTACCACACAGAATAAGTGGAAGGATTTTGCAATTGGAGACAGTAACTCAGACAGAAGCCATGAGAAGGCGTTATCGCTATTTAAGTCATTTCTCGTTAACAACAGTATTGCAGTTCTGTGAGATTGATCTGAGTGAGCTATTGTCTCCTGATGCCCTGTCACCCTTTATGGAAGAGATAAAGAAGCGTGAAAGGCAGAGGAAGCAAATTGCTAGGAAGGAGCGGAAGGAGCAAATAAAGGCTGAATCTGCCATGGCATATCCCATCCCCATAGTAGCAGGCTTTGCACAGTCCTTTTATGATGAACCCCCCACATTCTCCATGGATGACTTTGAAGCTTTGGGAAGTTCTTCGGTGACCTCATCCAGCCCTCCAATTGTTGGAGAAAGAAGACTGTTCTCAAGTGTTACGAGGCTTGGTTTTGCTGCTGGACATGATTCTCCCTCCTTGAAACTAGATGGGACAAATTCCCTGAATGGCAATGATGCAGGATCCTCTCTTGAGAGCACTGCTGCAGGCACTCAAAATGCAGGTGTAACGTCATTTGCTAATGTAATATCCAGAGCTAAACCCGAGGAAAATTTGGATGCACCGAAGATTAATGGTTCGGGGAAAAAGGGGAAGAAGCCAAGTCGAGTCCTCCTGTCAACAACCGGTGGTCGGCGCTATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
zf-C3HC4

Protein Analysis

762

Amino Acids

83.62

Weight (kDa)

6.63

Isoelectric Point (pI)

56.12

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
zf-C3HC4 PF00097 240 - 286 6.2e-06 Zinc finger, C3HC4 type (RING finger)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 2135
Acc36I ACCTGC 2 cut(s) 810, 2135
AccB7I CCANNNNNTGG 2 cut(s) 1405, 1994
AccBSI CCGCTC 1 cut(s) 1837
AccI GTMKAC 3 cut(s) 917, 955, 1262
AciI CCGC 5 cut(s) 128, 142, 765, 1415, 1837
AcoI YGGCCR 1 cut(s) 85
AcsI RAATTY 7 cut(s) 147, 478, 605, 1270, 1357, 2080, 2194
AcuI CTGAAG 1 cut(s) 575
AfaI GTAC 1 cut(s) 1523
AfiI CCNNNNNNNGG 8 cut(s) 709, 808, 898, 1405, 1479, 1680, 1994, 2274
AgeI ACCGGT 2 cut(s) 360, 2267
AgsI TTSAA 5 cut(s) 54, 478, 1047, 1949, 2065
AhdI GACNNNNNGTC 2 cut(s) 184, 516
AjnI CCWGG 5 cut(s) 214, 274, 379, 1146, 1533
AluBI AGCT 7 cut(s) 233, 638, 1102, 1156, 1753, 1952, 2180
AluI AGCT 7 cut(s) 233, 638, 1102, 1156, 1753, 1952, 2180
Alw21I GWGCWC 2 cut(s) 1218, 2123
Alw26I GTCTC 6 cut(s) 117, 192, 207, 296, 1646, 1764
Ama87I CYCGRG 1 cut(s) 2186
AoxI GGCC 4 cut(s) 85, 217, 377, 1429
ApeKI GCWGC 6 cut(s) 233, 553, 1172, 1538, 2039, 2126
ApoI RAATTY 7 cut(s) 147, 478, 605, 1270, 1357, 2080, 2194
AseI ATTAAT 1 cut(s) 2214
AsiGI ACCGGT 2 cut(s) 360, 2267
Asp700I GAANNNNTTC 1 cut(s) 1963
AspLEI GCGC 1 cut(s) 2280
AspS9I GGNCC 2 cut(s) 218, 518
AsuC2I CCSGG 1 cut(s) 1220
AsuHPI GGTGA 7 cut(s) 268, 842, 864, 938, 1346, 1767, 1981
AvaI CYCGRG 1 cut(s) 2186
AvaII GGWCC 1 cut(s) 518
BaeGI GKGCMC 1 cut(s) 1485
BalI TGGCCA 1 cut(s) 87
BamHI GGATCC 2 cut(s) 649, 2105
BarI GAAGNNNNNNTAC 2 cut(s) 394, 426
BauI CACGAG 1 cut(s) 299
BbsI GAAGAC 3 cut(s) 33, 1577, 2011
Bbv12I GWGCWC 2 cut(s) 1218, 2123
BbvI GCAGC 6 cut(s) 220, 565, 1159, 1525, 2026, 2113
BccI CCATC 9 cut(s) 14, 124, 229, 802, 1304, 1376, 1538, 1886, 2066
BciT130I CCWGG 5 cut(s) 216, 276, 381, 1148, 1535
BciVI GTATCC 1 cut(s) 747
BcnI CCSGG 1 cut(s) 1220
BcoDI GTCTC 6 cut(s) 117, 192, 207, 296, 1646, 1764
BfaI CTAG 6 cut(s) 366, 513, 546, 1103, 1827, 2069
BfmI CTRYAG 1 cut(s) 2127
BfoI RGCGCY 1 cut(s) 2281
BfuAI ACCTGC 2 cut(s) 810, 2135
BfuI GTATCC 1 cut(s) 747
BglII AGATCT 1 cut(s) 1072
BisI GCNGC 6 cut(s) 234, 554, 1173, 1539, 2040, 2127
BlsI GCNGC 6 cut(s) 235, 555, 1174, 1540, 2041, 2128
Bme1390I CCNGG 6 cut(s) 216, 276, 381, 1148, 1220, 1535
Bme18I GGWCC 1 cut(s) 518
BmeRI GACNNNNNGTC 2 cut(s) 184, 516
BmeT110I CYCGRG 1 cut(s) 2186
BmgT120I GGNCC 2 cut(s) 218, 518
BmiI GGNNCC 6 cut(s) 316, 322, 328, 651, 1604, 2107
BmrFI CCNGG 6 cut(s) 216, 276, 381, 1148, 1220, 1535
BmsI GCATC 7 cut(s) 836, 994, 1096, 1304, 1756, 2089, 2191
BpiI GAAGAC 3 cut(s) 33, 1577, 2011
BplI GAGNNNNNCTC 2 cut(s) 293, 325
BpmI CTGGAG 2 cut(s) 198, 1169
BpuEI CTTGAG 2 cut(s) 1999, 2135
BpuMI CCSGG 1 cut(s) 1220
BsaJI CCNNGG 6 cut(s) 25, 876, 1477, 1866, 1935, 2187
BsaWI WCCGGW 2 cut(s) 360, 2267
BsaXI ACNNNNNCTCC 2 cut(s) 299, 329
Bsc4I CCNNNNNNNGG 8 cut(s) 709, 808, 898, 1405, 1479, 1680, 1994, 2274
Bse118I RCCGGY 2 cut(s) 360, 2267
Bse1I ACTGG 1 cut(s) 1246
Bse3DI GCAATG 2 cut(s) 1182, 2101
BseBI CCWGG 5 cut(s) 216, 276, 381, 1148, 1535
BseDI CCNNGG 6 cut(s) 25, 876, 1477, 1866, 1935, 2187
BseGI GGATG 6 cut(s) 1315, 1564, 1878, 1945, 1976, 2206
BseLI CCNNNNNNNGG 8 cut(s) 709, 808, 898, 1405, 1479, 1680, 1994, 2274
BseMI GCAATG 2 cut(s) 1182, 2101
BseMII CTCAG 8 cut(s) 122, 134, 197, 521, 648, 764, 1676, 1736
BseNI ACTGG 1 cut(s) 1246
BseRI GAGGAG 6 cut(s) 513, 516, 519, 522, 525, 528
BseSI GKGCMC 1 cut(s) 1485
BseXI GCAGC 6 cut(s) 220, 565, 1159, 1525, 2026, 2113
BsgI GTGCAG 1 cut(s) 219
BshFI GGCC 4 cut(s) 87, 219, 379, 1431
BshTI ACCGGT 2 cut(s) 360, 2267
BsiHKAI GWGCWC 2 cut(s) 1218, 2123
BsiHKCI CYCGRG 1 cut(s) 2186
BsiSI CCGG 6 cut(s) 312, 318, 324, 361, 1219, 2268
BslFI GGGAC 3 cut(s) 109, 1399, 2089
BslI CCNNNNNNNGG 8 cut(s) 709, 808, 898, 1405, 1479, 1680, 1994, 2274
BsmAI GTCTC 6 cut(s) 117, 192, 207, 296, 1646, 1764
BsmFI GGGAC 3 cut(s) 109, 1399, 2089
BsmI GAATGC 1 cut(s) 789
BsnI GGCC 4 cut(s) 87, 219, 379, 1431
BsoBI CYCGRG 1 cut(s) 2186
Bsp1286I GDGCHC 3 cut(s) 1218, 1485, 2123
Bsp19I CCATGG 2 cut(s) 1866, 1935
BspACI CCGC 5 cut(s) 128, 142, 765, 1415, 1837
BspANI GGCC 4 cut(s) 87, 219, 379, 1431
BspCNI CTCAG 8 cut(s) 121, 133, 196, 520, 647, 763, 1675, 1737
BspHI TCATGA 1 cut(s) 864
BspLI GGNNCC 6 cut(s) 316, 322, 328, 651, 1604, 2107
BspMAI CTGCAG 1 cut(s) 2131
BspMI ACCTGC 2 cut(s) 810, 2135
BsrBI CCGCTC 1 cut(s) 1837
BsrDI GCAATG 2 cut(s) 1182, 2101
BsrFI RCCGGY 2 cut(s) 360, 2267
BsrI ACTGG 1 cut(s) 1246
BssAI RCCGGY 2 cut(s) 360, 2267
BssECI CCNNGG 6 cut(s) 25, 876, 1477, 1866, 1935, 2187
BssNAI GTATAC 1 cut(s) 918
BssSI CACGAG 1 cut(s) 299
BssT1I CCWWGG 5 cut(s) 25, 876, 1477, 1866, 1935
Bst1107I GTATAC 1 cut(s) 918
Bst2BI CACGAG 1 cut(s) 299
Bst2UI CCWGG 5 cut(s) 216, 276, 381, 1148, 1535
Bst4CI ACNGT 9 cut(s) 669, 709, 922, 1289, 1474, 1657, 1720, 1905, 2010
Bst6I CTCTTC 2 cut(s) 899, 1782
BstAPI GCANNNNNTGC 1 cut(s) 1898
BstC8I GCNNGC 2 cut(s) 1894, 2131
BstDEI CTNAG 9 cut(s) 108, 120, 183, 507, 634, 750, 950, 1662, 1745
BstDSI CCRYGG 2 cut(s) 1866, 1935
BstEII GGTNACC 1 cut(s) 1969
BstF5I GGATG 6 cut(s) 1315, 1564, 1878, 1945, 1976, 2206
BstH2I RGCGCY 1 cut(s) 2281
BstHHI GCGC 1 cut(s) 2280
BstMAI GTCTC 6 cut(s) 117, 192, 207, 296, 1646, 1764
BstMWI GCNNNNNNNGC 5 cut(s) 1807, 1816, 1843, 1862, 1898
BstNI CCWGG 5 cut(s) 216, 276, 381, 1148, 1535
BstPI GGTNACC 1 cut(s) 1969
BstSCI CCNGG 6 cut(s) 214, 274, 379, 1146, 1218, 1533
BstSFI CTRYAG 1 cut(s) 2127
BstSLI GKGCMC 1 cut(s) 1485
BstV1I GCAGC 6 cut(s) 220, 565, 1159, 1525, 2026, 2113
BstV2I GAAGAC 3 cut(s) 33, 1577, 2011
BstX2I RGATCY 6 cut(s) 29, 242, 649, 1072, 1408, 2105
BstXI CCANNNNNNTGG 1 cut(s) 1598
BstYI RGATCY 6 cut(s) 29, 242, 649, 1072, 1408, 2105
BstZ17I GTATAC 1 cut(s) 918
BsuI GTATCC 1 cut(s) 747
BsuRI GGCC 4 cut(s) 87, 219, 379, 1431
BtgI CCRYGG 2 cut(s) 1866, 1935
BtgZI GCGATG 1 cut(s) 207
BtsCI GGATG 6 cut(s) 1315, 1564, 1878, 1945, 1976, 2206
BtsI GCAGTG 1 cut(s) 2121
BtsIMutI CAGTG 4 cut(s) 674, 722, 1294, 2121
BveI ACCTGC 2 cut(s) 810, 2135
Cac8I GCNNGC 2 cut(s) 1894, 2131
CciI TCATGA 1 cut(s) 864
CfoI GCGC 1 cut(s) 2280
Cfr10I RCCGGY 2 cut(s) 360, 2267
Cfr13I GGNCC 2 cut(s) 218, 518
Csp6I GTAC 1 cut(s) 1522
CspAI ACCGGT 2 cut(s) 360, 2267
CviQI GTAC 1 cut(s) 1522
DdeI CTNAG 9 cut(s) 108, 120, 183, 507, 634, 750, 950, 1662, 1745
DriI GACNNNNNGTC 2 cut(s) 184, 516
EaeI YGGCCR 1 cut(s) 85
Eam1104I CTCTTC 2 cut(s) 899, 1782
Eam1105I GACNNNNNGTC 2 cut(s) 184, 516
EarI CTCTTC 2 cut(s) 899, 1782
EciI GGCGGA 1 cut(s) 1430
Eco130I CCWWGG 5 cut(s) 25, 876, 1477, 1866, 1935
Eco147I AGGCCT 1 cut(s) 379
Eco32I GATATC 1 cut(s) 870
Eco47I GGWCC 1 cut(s) 518
Eco57I CTGAAG 1 cut(s) 575
Eco88I CYCGRG 1 cut(s) 2186
Eco91I GGTNACC 1 cut(s) 1969
EcoO109I RGGNCCY 1 cut(s) 518
EcoO65I GGTNACC 1 cut(s) 1969
EcoRII CCWGG 5 cut(s) 214, 274, 379, 1146, 1533
EcoRV GATATC 1 cut(s) 870
EcoT14I CCWWGG 5 cut(s) 25, 876, 1477, 1866, 1935
EcoT22I ATGCAT 1 cut(s) 791
ErhI CCWWGG 5 cut(s) 25, 876, 1477, 1866, 1935
FaqI GGGAC 3 cut(s) 109, 1399, 2089
FauI CCCGC 2 cut(s) 135, 149
FauNDI CATATG 3 cut(s) 683, 1162, 1456
FblI GTMKAC 3 cut(s) 917, 955, 1262
Fnu4HI GCNGC 6 cut(s) 234, 554, 1173, 1539, 2040, 2127
FokI GGATG 6 cut(s) 1322, 1551, 1865, 1952, 1963, 2213
Fsp4HI GCNGC 6 cut(s) 234, 554, 1173, 1539, 2040, 2127
FspBI CTAG 6 cut(s) 366, 513, 546, 1103, 1827, 2069
GlaI GCGC 1 cut(s) 2279
GluI GCNGC 6 cut(s) 234, 554, 1173, 1539, 2040, 2127
GsuI CTGGAG 2 cut(s) 198, 1169
HaeII RGCGCY 1 cut(s) 2281
HaeIII GGCC 4 cut(s) 87, 219, 379, 1431
HapII CCGG 6 cut(s) 312, 318, 324, 361, 1219, 2268
HhaI GCGC 1 cut(s) 2280
Hin6I GCGC 1 cut(s) 2278
HinP1I GCGC 1 cut(s) 2278
HincII GTYRAC 3 cut(s) 956, 1713, 2262
HindII GTYRAC 3 cut(s) 956, 1713, 2262
HindIII AAGCTT 2 cut(s) 1154, 1950
HpaI GTTAAC 1 cut(s) 1713
HpaII CCGG 6 cut(s) 312, 318, 324, 361, 1219, 2268
HphI GGTGA 7 cut(s) 268, 842, 864, 938, 1346, 1767, 1981
Hpy166II GTNNAC 9 cut(s) 67, 341, 918, 956, 1053, 1263, 1369, 1713, 2262
Hpy188III TCNNGA 7 cut(s) 206, 366, 653, 865, 1763, 2114, 2175
Hpy8I GTNNAC 9 cut(s) 67, 341, 918, 956, 1053, 1263, 1369, 1713, 2262
HpyAV CCTTC 7 cut(s) 543, 808, 1421, 1629, 1674, 1825, 1834
HpyCH4III ACNGT 9 cut(s) 669, 709, 922, 1289, 1474, 1657, 1720, 1905, 2010
HpyCH4IV ACGT 3 cut(s) 1068, 1489, 2153
HpyF10VI GCNNNNNNNGC 5 cut(s) 1807, 1816, 1843, 1862, 1898
HpyF3I CTNAG 9 cut(s) 108, 120, 183, 507, 634, 750, 950, 1662, 1745
HpySE526I ACGT 3 cut(s) 1068, 1489, 2153
HspAI GCGC 1 cut(s) 2278
KspAI GTTAAC 1 cut(s) 1713
LmnI GCTCC 6 cut(s) 320, 326, 332, 1602, 1834, 1843
Lsp1109I GCAGC 6 cut(s) 220, 565, 1159, 1525, 2026, 2113
LweI GCATC 7 cut(s) 836, 994, 1096, 1304, 1756, 2089, 2191
MaeI CTAG 6 cut(s) 366, 513, 546, 1103, 1827, 2069
MaeII ACGT 3 cut(s) 1068, 1489, 2153
MbiI CCGCTC 1 cut(s) 1837
MfeI CAATTG 2 cut(s) 1646, 1989
MflI RGATCY 6 cut(s) 29, 242, 649, 1072, 1408, 2105
MhlI GDGCHC 3 cut(s) 1218, 1485, 2123
MlsI TGGCCA 1 cut(s) 87
MluNI TGGCCA 1 cut(s) 87
MlyI GAGTC 4 cut(s) 173, 1136, 1511, 2259
MmeI TCCRAC 3 cut(s) 201, 597, 1975
Mox20I TGGCCA 1 cut(s) 87
Mph1103I ATGCAT 1 cut(s) 791
MroXI GAANNNNTTC 1 cut(s) 1963
MscI TGGCCA 1 cut(s) 87
MseI TTAA 3 cut(s) 1697, 1712, 2214
MslI CAYNNNNRTG 5 cut(s) 686, 828, 1165, 1437, 1596
Msp20I TGGCCA 1 cut(s) 87
MspA1I CMGCKG 2 cut(s) 233, 638
MspI CCGG 6 cut(s) 312, 318, 324, 361, 1219, 2268
MspR9I CCNGG 6 cut(s) 216, 276, 381, 1148, 1220, 1535
MunI CAATTG 2 cut(s) 1646, 1989
Mva1269I GAATGC 1 cut(s) 789
MvaI CCWGG 5 cut(s) 216, 276, 381, 1148, 1535
MwoI GCNNNNNNNGC 5 cut(s) 1807, 1816, 1843, 1862, 1898
NciI CCSGG 1 cut(s) 1220
NcoI CCATGG 2 cut(s) 1866, 1935
NdeI CATATG 3 cut(s) 683, 1162, 1456
NlaIV GGNNCC 6 cut(s) 316, 322, 328, 651, 1604, 2107
NmuCI GTSAC 5 cut(s) 256, 830, 1334, 1773, 1969
NsiI ATGCAT 1 cut(s) 791
PagI TCATGA 1 cut(s) 864
PaqCI CACCTGC 1 cut(s) 2135
PceI AGGCCT 1 cut(s) 379
PcsI WCGNNNNNNNCGW 1 cut(s) 174
PctI GAATGC 1 cut(s) 789
PdmI GAANNNNTTC 1 cut(s) 1963
PfeI GAWTC 9 cut(s) 209, 283, 620, 641, 965, 1418, 1558, 1859, 2051
PflMI CCANNNNNTGG 2 cut(s) 1405, 1994
PinAI ACCGGT 2 cut(s) 360, 2267
PkrI GCNGC 6 cut(s) 235, 555, 1174, 1540, 2041, 2128
PleI GAGTC 4 cut(s) 173, 1135, 1511, 2258
PpsI GAGTC 4 cut(s) 173, 1135, 1511, 2258
PpuMI RGGWCCY 1 cut(s) 518
PshBI ATTAAT 1 cut(s) 2214
Psp5II RGGWCCY 1 cut(s) 518
Psp6I CCWGG 5 cut(s) 214, 274, 379, 1146, 1533
PspEI GGTNACC 1 cut(s) 1969
PspGI CCWGG 5 cut(s) 214, 274, 379, 1146, 1533
PspN4I GGNNCC 6 cut(s) 316, 322, 328, 651, 1604, 2107
PspPI GGNCC 2 cut(s) 218, 518
PspPPI RGGWCCY 1 cut(s) 518
PstI CTGCAG 1 cut(s) 2131
PsuI RGATCY 6 cut(s) 29, 242, 649, 1072, 1408, 2105
PvuII CAGCTG 2 cut(s) 233, 638
RsaI GTAC 1 cut(s) 1523
RsaNI GTAC 1 cut(s) 1522
RseI CAYNNNNRTG 5 cut(s) 686, 828, 1165, 1437, 1596
SalI GTCGAC 1 cut(s) 954
SaqAI TTAA 3 cut(s) 1697, 1712, 2214
SatI GCNGC 6 cut(s) 234, 554, 1173, 1539, 2040, 2127
Sau96I GGNCC 2 cut(s) 218, 518
SchI GAGTC 4 cut(s) 173, 1136, 1511, 2259
ScrFI CCNGG 6 cut(s) 216, 276, 381, 1148, 1220, 1535
SduI GDGCHC 3 cut(s) 1218, 1485, 2123
SfaNI GCATC 7 cut(s) 836, 994, 1096, 1304, 1756, 2089, 2191
SfcI CTRYAG 1 cut(s) 2127
SinI GGWCC 1 cut(s) 518
SmiMI CAYNNNNRTG 5 cut(s) 686, 828, 1165, 1437, 1596
SmlI CTYRAG 2 cut(s) 2014, 2114
SmoI CTYRAG 2 cut(s) 2014, 2114
SseBI AGGCCT 1 cut(s) 379
SsiI CCGC 5 cut(s) 128, 142, 765, 1415, 1837
SspMI CTAG 6 cut(s) 366, 513, 546, 1103, 1827, 2069
StuI AGGCCT 1 cut(s) 379
StyD4I CCNGG 6 cut(s) 214, 274, 379, 1146, 1218, 1533
StyI CCWWGG 5 cut(s) 25, 876, 1477, 1866, 1935
TaaI ACNGT 9 cut(s) 669, 709, 922, 1289, 1474, 1657, 1720, 1905, 2010
TaiI ACGT 3 cut(s) 1071, 1492, 2156
TaqI TCGA 4 cut(s) 168, 955, 1140, 2248
TfiI GAWTC 9 cut(s) 209, 283, 620, 641, 965, 1418, 1558, 1859, 2051
Tru1I TTAA 3 cut(s) 1697, 1712, 2214
Tru9I TTAA 3 cut(s) 1697, 1712, 2214
TscAI CASTG 4 cut(s) 674, 722, 1294, 2128
TseFI GTSAC 5 cut(s) 256, 830, 1334, 1773, 1969
TseI GCWGC 6 cut(s) 233, 553, 1172, 1538, 2039, 2126
Tsp45I GTSAC 5 cut(s) 256, 830, 1334, 1773, 1969
TspGWI ACGGA 2 cut(s) 275, 1240
TspRI CASTG 4 cut(s) 674, 722, 1294, 2128
Van91I CCANNNNNTGG 2 cut(s) 1405, 1994
VpaK11BI GGWCC 1 cut(s) 518
VspI ATTAAT 1 cut(s) 2214
XapI RAATTY 7 cut(s) 147, 478, 605, 1270, 1357, 2080, 2194
XbaI TCTAGA 1 cut(s) 365
XcmI CCANNNNNNNNNTGG 4 cut(s) 458, 706, 1541, 1933
XmiI GTMKAC 3 cut(s) 917, 955, 1262
XmnI GAANNNNTTC 1 cut(s) 1963
XspI CTAG 6 cut(s) 366, 513, 546, 1103, 1827, 2069
Zsp2I ATGCAT 1 cut(s) 791
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.