Rroxscaffold_2G00076420

Ring finger protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000002
OG0006714
Physical Location & Seq
Forward (+)
277819 .. 282076
4258 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_2G00076420.1

Sequence Viewer

Length: 2271 bp
ATGTCCATCTTGCCCAACCAAAGCCAAGGATCTAACTCGTCTTCTTCTTCAATTCCCTCTGTAAACCCTAATTCCCAACATGGCCACCTGTTCCTTTCCCAATCCCAATCCCAATCTCCATCTCAGTCTCAGTCCCCGCCCTCTCTCTCCCGCCAAATTCTCACATTTGGATCACTCGACATCTCCGACTCTCAGTCTCCCCTCTCTGTGTCTCCCGATTTTCGAGGCCCATCGCCACCAGCTGCACAAGGATCTTCCCAACAGGTGACAGAGTTAGGACTTCCTGGTAAGAATGTTTTGCCTAACCACGAGACACACTCTCAGTCTCGCTCCCGAGGGGCTGGTTCATACCGGTCTAGAGGGAAAAGGCCTGGAAGCCAACAGAGTATCAGTAATGTTGCTTCTCATGGAAACTCAACGCAACCAGCAGGAAGAAAATCCCAGATGATGAATGGCAACCACCTCTTGAATTTTCATTATGACCCCATTTCCCGTCCTCAGACTAGAGGTCCTCCTCCTCCTCCTCCTGCTAGAAGGCAGCATAAGAGAAAGCCCTACAACAAAGACTTATTTCTTCAGGCCAACTACAAATTTGTTGTGTTGGATTCGGGGAACTACTCAGCTGAATCAATGGATCCTGATAAGATGTTACAGTGGGAAGACATCATATGTGTGAGGTATTCCACCCCTACTGTGGTTCAGTGTCCAATTTGTTTGGAGTATCCTCTTTGTCCTCAGATAACCTCATGCGGACATATATTCTGTTTCCCATGCATTCTCCAATACCTGCTGATGGGGAAGGAGGATCATAAGGGTGACTGCTGGAAAAGATGCCCATTGTGTTTTTTGATGATATCACCCAAGGATTTATACACCCTCTTCGTGGAGAATGTTAAGCAGTATACTGTTGGTGATACTATGGAGTTTATGCTTCTTAGGCGACAAAAGGATTCATTTACCATATCCCATAAAAGTAAAAAGGAGAAAGATGCCATGTCAGGTTGTGATGATGAAAGTTATGATCCCTTTTCAAAGTTTACATTTACATCAGACGTTGATCTTTCAGTCAGAAAGGCAATATCAGAGCTAGATGCTTGGTTAGTCAGGGCAGAGTCAGGTCTTGTCGATGACCTGGAGAAGCTTCCATATGTATGTGCTGCAATGGAACAATTAGAACAGAGGAAGAAGTATTGGAATGAGCACCGGGCTATTGACAACAATAAAACTGGTTCGTCCGTTGTCTTGTCTACTGCAAATTCTACTAATGGTAACAGTGAAGCATCAATAATTGGGGATGGAACTTTGTCTAATGGTTTCAGTGACTTTAATAAGTGTTCAGAGAATTTATTAGTGGACAAGTCAGATGATGGGACTTCATCTGACCAATCTGTGGATGTGGCGGAATCATTGGAAGGCAATAAAAATGTTTTATCTTCTTCATATGATGAAAGCAAGACCGTCCAAGGGCACTCACGTTTCTCTGAAAGTGTAAAAGACAAGGACTCGTACAATTTCTACCAGGCTGCTGATGGTCAGCACATGATTCTCCATCCATTAAACATGAAATGTCTTCTCCACCATTATGGGAGCCATGATATGCTACCACACAGAATAAGTGGAAGGATTTTGCAATTGGAGACAGTAACTCAGTCAGAAGCCATGAGAAGGCGTTATCGCTATTTAAGTCATTTCTCGTTAACAACAGTATTGCAGTTCTGTGAGATTGATCTGAGTGAGCTATTGTCTCCTGATGCCCTGTCACCCTTTATGGAAGAGATAAAGAAGCGTGAAAGGCAGAGGAAGCAAATTGCTAGGAAGGAGCGGAAGGAGCAAATAAAGGCTGAATCTGCCATGGCATATCCCATCCCCATAGTAGCAGGCTTTGCACAGTCCTTTTATGATGAATCCCCCACATTCTCCATGGATGACTTTGAAGCTTTGGGAAGTTCTTCGGTGACCTCATCCAGCCCTCCAATTGTTGGAGAAAGGAGACTGTTCTCAAGTGTTACGAGGCTTGGTTTTGCTGCTGGACATGATTCTCCATCCTTGAAACTAGATGGGACTAATTCCCTGAATGGCAATGATGCAGGATCCTCTCTTGAGAGCACTGCTGCAGGCACTCAAAATGCGGGTGTAACGTCATTTGCTAATGTAATATCCAGAGCTAAACCCGAGGAAAATTTGGATGCACCGAAGATTAACGGTTCGGGGAAAAAGGGGAAGAAGCCAAGTCGAGTCCTCTTGTCAACAACCGGTGGTCGGCGCTATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
zf-C3HC4

Protein Analysis

756

Amino Acids

83.57

Weight (kDa)

7.57

Isoelectric Point (pI)

61.15

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
zf-C3HC4 PF00097 235 - 281 6.1e-06 Zinc finger, C3HC4 type (RING finger)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 795
AccB7I CCANNNNNTGG 2 cut(s) 1390, 1979
AccBSI CCGCTC 1 cut(s) 1822
AccI GTMKAC 2 cut(s) 902, 1247
AciI CCGC 6 cut(s) 137, 151, 750, 1400, 1822, 2129
AclWI GGATC 9 cut(s) 37, 178, 259, 629, 642, 813, 1016, 2085, 2098
AcoI YGGCCR 1 cut(s) 82
AcsI RAATTY 6 cut(s) 156, 469, 590, 1255, 1342, 2179
AcuI CTGAAG 1 cut(s) 560
AfaI GTAC 1 cut(s) 1508
AfiI CCNNNNNNNGG 8 cut(s) 694, 793, 883, 1390, 1464, 1665, 1979, 2259
AgeI ACCGGT 2 cut(s) 351, 2252
AgsI TTSAA 5 cut(s) 51, 469, 1032, 1934, 2050
AhdI GACNNNNNGTC 2 cut(s) 193, 507
AjnI CCWGG 4 cut(s) 283, 370, 1131, 1518
AluBI AGCT 7 cut(s) 242, 623, 1087, 1141, 1738, 1937, 2165
AluI AGCT 7 cut(s) 242, 623, 1087, 1141, 1738, 1937, 2165
Alw21I GWGCWC 2 cut(s) 1203, 2108
Alw26I GTCTC 8 cut(s) 132, 201, 216, 305, 330, 1631, 1749, 1984
AlwI GGATC 9 cut(s) 37, 178, 259, 629, 642, 813, 1016, 2085, 2098
Ama87I CYCGRG 2 cut(s) 333, 2171
AoxI GGCC 4 cut(s) 82, 226, 368, 579
ApeKI GCWGC 6 cut(s) 242, 538, 1157, 1523, 2024, 2111
ApoI RAATTY 6 cut(s) 156, 469, 590, 1255, 1342, 2179
AsiGI ACCGGT 2 cut(s) 351, 2252
Asp700I GAANNNNTTC 1 cut(s) 1948
AspLEI GCGC 1 cut(s) 2265
AspS9I GGNCC 2 cut(s) 227, 509
AsuC2I CCSGG 1 cut(s) 1205
AsuHPI GGTGA 6 cut(s) 277, 827, 849, 923, 1752, 1966
AvaI CYCGRG 2 cut(s) 333, 2171
AvaII GGWCC 1 cut(s) 509
BaeGI GKGCMC 1 cut(s) 1470
BalI TGGCCA 1 cut(s) 84
BamHI GGATCC 2 cut(s) 634, 2090
BarI GAAGNNNNNNTAC 2 cut(s) 385, 417
BauI CACGAG 1 cut(s) 308
BbsI GAAGAC 3 cut(s) 33, 666, 1562
Bbv12I GWGCWC 2 cut(s) 1203, 2108
BbvI GCAGC 6 cut(s) 229, 550, 1144, 1510, 2011, 2098
BciT130I CCWGG 4 cut(s) 285, 372, 1133, 1520
BciVI GTATCC 1 cut(s) 732
BcnI CCSGG 1 cut(s) 1205
BcoDI GTCTC 8 cut(s) 132, 201, 216, 305, 330, 1631, 1749, 1984
BfaI CTAG 6 cut(s) 357, 504, 531, 1088, 1812, 2054
BfmI CTRYAG 1 cut(s) 2112
BfoI RGCGCY 1 cut(s) 2266
BfuAI ACCTGC 1 cut(s) 795
BfuI GTATCC 1 cut(s) 732
BisI GCNGC 6 cut(s) 243, 539, 1158, 1524, 2025, 2112
BlsI GCNGC 6 cut(s) 244, 540, 1159, 1525, 2026, 2113
Bme1390I CCNGG 5 cut(s) 285, 372, 1133, 1205, 1520
Bme18I GGWCC 1 cut(s) 509
BmeRI GACNNNNNGTC 2 cut(s) 193, 507
BmeT110I CYCGRG 2 cut(s) 333, 2171
BmgT120I GGNCC 2 cut(s) 227, 509
BmiI GGNNCC 3 cut(s) 636, 1589, 2092
BmrFI CCNGG 5 cut(s) 285, 372, 1133, 1205, 1520
BmsI GCATC 7 cut(s) 821, 979, 1081, 1289, 1741, 2074, 2176
BpiI GAAGAC 3 cut(s) 33, 666, 1562
BplI GAGNNNNNCTC 2 cut(s) 302, 334
BpmI CTGGAG 1 cut(s) 1154
BpuEI CTTGAG 2 cut(s) 1984, 2120
BpuMI CCSGG 1 cut(s) 1205
BsaJI CCNNGG 7 cut(s) 25, 334, 861, 1462, 1851, 1920, 2172
BsaWI WCCGGW 2 cut(s) 351, 2252
Bsc4I CCNNNNNNNGG 8 cut(s) 694, 793, 883, 1390, 1464, 1665, 1979, 2259
Bse118I RCCGGY 2 cut(s) 351, 2252
Bse1I ACTGG 1 cut(s) 1231
Bse3DI GCAATG 2 cut(s) 1167, 2086
BseBI CCWGG 4 cut(s) 285, 372, 1133, 1520
BseDI CCNNGG 7 cut(s) 25, 334, 861, 1462, 1851, 1920, 2172
BseGI GGATG 8 cut(s) 1300, 1399, 1549, 1863, 1930, 1961, 2042, 2191
BseLI CCNNNNNNNGG 8 cut(s) 694, 793, 883, 1390, 1464, 1665, 1979, 2259
BseMI GCAATG 2 cut(s) 1167, 2086
BseMII CTCAG 9 cut(s) 137, 143, 206, 335, 512, 633, 749, 1661, 1721
BseNI ACTGG 1 cut(s) 1231
BseRI GAGGAG 4 cut(s) 504, 507, 510, 513
BseSI GKGCMC 1 cut(s) 1470
BseXI GCAGC 6 cut(s) 229, 550, 1144, 1510, 2011, 2098
BsgI GTGCAG 1 cut(s) 228
BshFI GGCC 4 cut(s) 84, 228, 370, 581
BshTI ACCGGT 2 cut(s) 351, 2252
BsiHKAI GWGCWC 2 cut(s) 1203, 2108
BsiHKCI CYCGRG 2 cut(s) 333, 2171
BsiSI CCGG 3 cut(s) 352, 1204, 2253
BslFI GGGAC 3 cut(s) 118, 1384, 2074
BslI CCNNNNNNNGG 8 cut(s) 694, 793, 883, 1390, 1464, 1665, 1979, 2259
BsmAI GTCTC 8 cut(s) 132, 201, 216, 305, 330, 1631, 1749, 1984
BsmFI GGGAC 3 cut(s) 118, 1384, 2074
BsmI GAATGC 1 cut(s) 774
BsnI GGCC 4 cut(s) 84, 228, 370, 581
BsoBI CYCGRG 2 cut(s) 333, 2171
Bsp1286I GDGCHC 3 cut(s) 1203, 1470, 2108
Bsp143I GATC 9 cut(s) 29, 170, 251, 634, 805, 1021, 1057, 1726, 2090
Bsp19I CCATGG 2 cut(s) 1851, 1920
BspACI CCGC 6 cut(s) 137, 151, 750, 1400, 1822, 2129
BspANI GGCC 4 cut(s) 84, 228, 370, 581
BspCNI CTCAG 9 cut(s) 136, 142, 205, 334, 511, 632, 748, 1660, 1722
BspLI GGNNCC 3 cut(s) 636, 1589, 2092
BspMAI CTGCAG 1 cut(s) 2116
BspMI ACCTGC 1 cut(s) 795
BspPI GGATC 9 cut(s) 37, 178, 259, 629, 642, 813, 1016, 2085, 2098
BsrBI CCGCTC 1 cut(s) 1822
BsrDI GCAATG 2 cut(s) 1167, 2086
BsrFI RCCGGY 2 cut(s) 351, 2252
BsrI ACTGG 1 cut(s) 1231
BssAI RCCGGY 2 cut(s) 351, 2252
BssECI CCNNGG 7 cut(s) 25, 334, 861, 1462, 1851, 1920, 2172
BssMI GATC 9 cut(s) 29, 170, 251, 634, 805, 1021, 1057, 1726, 2090
BssNAI GTATAC 1 cut(s) 903
BssSI CACGAG 1 cut(s) 308
BssT1I CCWWGG 5 cut(s) 25, 861, 1462, 1851, 1920
Bst1107I GTATAC 1 cut(s) 903
Bst2BI CACGAG 1 cut(s) 308
Bst2UI CCWGG 4 cut(s) 285, 372, 1133, 1520
Bst6I CTCTTC 2 cut(s) 884, 1767
BstAPI GCANNNNNTGC 1 cut(s) 1883
BstC8I GCNNGC 2 cut(s) 1879, 2116
BstDSI CCRYGG 2 cut(s) 1851, 1920
BstEII GGTNACC 1 cut(s) 1954
BstF5I GGATG 8 cut(s) 1300, 1399, 1549, 1863, 1930, 1961, 2042, 2191
BstH2I RGCGCY 1 cut(s) 2266
BstHHI GCGC 1 cut(s) 2265
BstKTI GATC 9 cut(s) 32, 173, 254, 637, 808, 1024, 1060, 1729, 2093
BstMAI GTCTC 8 cut(s) 132, 201, 216, 305, 330, 1631, 1749, 1984
BstMBI GATC 9 cut(s) 29, 170, 251, 634, 805, 1021, 1057, 1726, 2090
BstMWI GCNNNNNNNGC 6 cut(s) 937, 1792, 1801, 1828, 1847, 1883
BstNI CCWGG 4 cut(s) 285, 372, 1133, 1520
BstPI GGTNACC 1 cut(s) 1954
BstSCI CCNGG 5 cut(s) 283, 370, 1131, 1203, 1518
BstSFI CTRYAG 1 cut(s) 2112
BstSLI GKGCMC 1 cut(s) 1470
BstV1I GCAGC 6 cut(s) 229, 550, 1144, 1510, 2011, 2098
BstV2I GAAGAC 3 cut(s) 33, 666, 1562
BstX2I RGATCY 4 cut(s) 29, 251, 634, 2090
BstXI CCANNNNNNTGG 1 cut(s) 1583
BstYI RGATCY 4 cut(s) 29, 251, 634, 2090
BstZ17I GTATAC 1 cut(s) 903
BsuI GTATCC 1 cut(s) 732
BsuRI GGCC 4 cut(s) 84, 228, 370, 581
BtgI CCRYGG 2 cut(s) 1851, 1920
BtgZI GCGATG 1 cut(s) 216
BtsCI GGATG 8 cut(s) 1300, 1399, 1549, 1863, 1930, 1961, 2042, 2191
BtsI GCAGTG 1 cut(s) 2106
BtsIMutI CAGTG 5 cut(s) 659, 707, 1279, 1324, 2106
BveI ACCTGC 1 cut(s) 795
Cac8I GCNNGC 2 cut(s) 1879, 2116
CfoI GCGC 1 cut(s) 2265
Cfr10I RCCGGY 2 cut(s) 351, 2252
Cfr13I GGNCC 2 cut(s) 227, 509
Csp6I GTAC 1 cut(s) 1507
CspAI ACCGGT 2 cut(s) 351, 2252
CviQI GTAC 1 cut(s) 1507
DpnI GATC 9 cut(s) 31, 172, 253, 636, 807, 1023, 1059, 1728, 2092
DpnII GATC 9 cut(s) 29, 170, 251, 634, 805, 1021, 1057, 1726, 2090
DriI GACNNNNNGTC 2 cut(s) 193, 507
EaeI YGGCCR 1 cut(s) 82
Eam1104I CTCTTC 2 cut(s) 884, 1767
Eam1105I GACNNNNNGTC 2 cut(s) 193, 507
EarI CTCTTC 2 cut(s) 884, 1767
EciI GGCGGA 1 cut(s) 1415
Eco130I CCWWGG 5 cut(s) 25, 861, 1462, 1851, 1920
Eco147I AGGCCT 1 cut(s) 370
Eco32I GATATC 1 cut(s) 855
Eco47I GGWCC 1 cut(s) 509
Eco57I CTGAAG 1 cut(s) 560
Eco88I CYCGRG 2 cut(s) 333, 2171
Eco91I GGTNACC 1 cut(s) 1954
EcoO109I RGGNCCY 1 cut(s) 509
EcoO65I GGTNACC 1 cut(s) 1954
EcoRII CCWGG 4 cut(s) 283, 370, 1131, 1518
EcoRV GATATC 1 cut(s) 855
EcoT14I CCWWGG 5 cut(s) 25, 861, 1462, 1851, 1920
EcoT22I ATGCAT 1 cut(s) 776
ErhI CCWWGG 5 cut(s) 25, 861, 1462, 1851, 1920
FaqI GGGAC 3 cut(s) 118, 1384, 2074
FauI CCCGC 3 cut(s) 144, 158, 2122
FauNDI CATATG 3 cut(s) 668, 1147, 1441
FblI GTMKAC 2 cut(s) 902, 1247
Fnu4HI GCNGC 6 cut(s) 243, 539, 1158, 1524, 2025, 2112
FokI GGATG 8 cut(s) 1307, 1406, 1536, 1850, 1937, 1948, 2029, 2198
Fsp4HI GCNGC 6 cut(s) 243, 539, 1158, 1524, 2025, 2112
FspBI CTAG 6 cut(s) 357, 504, 531, 1088, 1812, 2054
GlaI GCGC 1 cut(s) 2264
GluI GCNGC 6 cut(s) 243, 539, 1158, 1524, 2025, 2112
GsuI CTGGAG 1 cut(s) 1154
HaeII RGCGCY 1 cut(s) 2266
HaeIII GGCC 4 cut(s) 84, 228, 370, 581
HapII CCGG 3 cut(s) 352, 1204, 2253
HhaI GCGC 1 cut(s) 2265
Hin6I GCGC 1 cut(s) 2263
HinP1I GCGC 1 cut(s) 2263
HincII GTYRAC 2 cut(s) 1698, 2247
HindII GTYRAC 2 cut(s) 1698, 2247
HindIII AAGCTT 2 cut(s) 1139, 1935
HpaI GTTAAC 1 cut(s) 1698
HpaII CCGG 3 cut(s) 352, 1204, 2253
HphI GGTGA 6 cut(s) 277, 827, 849, 923, 1752, 1966
Hpy166II GTNNAC 7 cut(s) 64, 903, 1038, 1248, 1354, 1698, 2247
Hpy188III TCNNGA 8 cut(s) 215, 333, 357, 466, 638, 1748, 2099, 2160
Hpy8I GTNNAC 7 cut(s) 64, 903, 1038, 1248, 1354, 1698, 2247
HpyAV CCTTC 7 cut(s) 528, 793, 1406, 1614, 1659, 1810, 1819
HpyCH4IV ACGT 3 cut(s) 1053, 1474, 2138
HpyF10VI GCNNNNNNNGC 6 cut(s) 937, 1792, 1801, 1828, 1847, 1883
HpySE526I ACGT 3 cut(s) 1053, 1474, 2138
HspAI GCGC 1 cut(s) 2263
KspAI GTTAAC 1 cut(s) 1698
Kzo9I GATC 9 cut(s) 29, 170, 251, 634, 805, 1021, 1057, 1726, 2090
LmnI GCTCC 4 cut(s) 335, 1587, 1819, 1828
Lsp1109I GCAGC 6 cut(s) 229, 550, 1144, 1510, 2011, 2098
LweI GCATC 7 cut(s) 821, 979, 1081, 1289, 1741, 2074, 2176
MaeI CTAG 6 cut(s) 357, 504, 531, 1088, 1812, 2054
MaeII ACGT 3 cut(s) 1053, 1474, 2138
MalI GATC 9 cut(s) 31, 172, 253, 636, 807, 1023, 1059, 1728, 2092
MbiI CCGCTC 1 cut(s) 1822
MboI GATC 9 cut(s) 29, 170, 251, 634, 805, 1021, 1057, 1726, 2090
MfeI CAATTG 2 cut(s) 1631, 1974
MflI RGATCY 4 cut(s) 29, 251, 634, 2090
MhlI GDGCHC 3 cut(s) 1203, 1470, 2108
MlsI TGGCCA 1 cut(s) 84
MluNI TGGCCA 1 cut(s) 84
MlyI GAGTC 4 cut(s) 182, 1121, 1496, 2244
MmeI TCCRAC 3 cut(s) 210, 582, 1960
Mox20I TGGCCA 1 cut(s) 84
Mph1103I ATGCAT 1 cut(s) 776
MroXI GAANNNNTTC 1 cut(s) 1948
MscI TGGCCA 1 cut(s) 84
MseI TTAA 6 cut(s) 894, 1326, 1556, 1682, 1697, 2199
MslI CAYNNNNRTG 4 cut(s) 671, 813, 1150, 1581
Msp20I TGGCCA 1 cut(s) 84
MspA1I CMGCKG 2 cut(s) 242, 623
MspI CCGG 3 cut(s) 352, 1204, 2253
MspR9I CCNGG 5 cut(s) 285, 372, 1133, 1205, 1520
MunI CAATTG 2 cut(s) 1631, 1974
Mva1269I GAATGC 1 cut(s) 774
MvaI CCWGG 4 cut(s) 285, 372, 1133, 1520
MwoI GCNNNNNNNGC 6 cut(s) 937, 1792, 1801, 1828, 1847, 1883
NciI CCSGG 1 cut(s) 1205
NcoI CCATGG 2 cut(s) 1851, 1920
NdeI CATATG 3 cut(s) 668, 1147, 1441
NdeII GATC 9 cut(s) 29, 170, 251, 634, 805, 1021, 1057, 1726, 2090
NlaIV GGNNCC 3 cut(s) 636, 1589, 2092
NmuCI GTSAC 5 cut(s) 265, 815, 1319, 1758, 1954
NsiI ATGCAT 1 cut(s) 776
PceI AGGCCT 1 cut(s) 370
PcsI WCGNNNNNNNCGW 1 cut(s) 183
PctI GAATGC 1 cut(s) 774
PdmI GAANNNNTTC 1 cut(s) 1948
PfeI GAWTC 8 cut(s) 605, 626, 950, 1403, 1543, 1844, 1904, 2036
PflMI CCANNNNNTGG 2 cut(s) 1390, 1979
PinAI ACCGGT 2 cut(s) 351, 2252
PkrI GCNGC 6 cut(s) 244, 540, 1159, 1525, 2026, 2113
PleI GAGTC 4 cut(s) 182, 1120, 1496, 2243
PpsI GAGTC 4 cut(s) 182, 1120, 1496, 2243
PpuMI RGGWCCY 1 cut(s) 509
Psp5II RGGWCCY 1 cut(s) 509
Psp6I CCWGG 4 cut(s) 283, 370, 1131, 1518
PspEI GGTNACC 1 cut(s) 1954
PspGI CCWGG 4 cut(s) 283, 370, 1131, 1518
PspN4I GGNNCC 3 cut(s) 636, 1589, 2092
PspPI GGNCC 2 cut(s) 227, 509
PspPPI RGGWCCY 1 cut(s) 509
PstI CTGCAG 1 cut(s) 2116
PsuI RGATCY 4 cut(s) 29, 251, 634, 2090
PvuII CAGCTG 2 cut(s) 242, 623
RsaI GTAC 1 cut(s) 1508
RsaNI GTAC 1 cut(s) 1507
RseI CAYNNNNRTG 4 cut(s) 671, 813, 1150, 1581
SaqAI TTAA 6 cut(s) 894, 1326, 1556, 1682, 1697, 2199
SatI GCNGC 6 cut(s) 243, 539, 1158, 1524, 2025, 2112
Sau3AI GATC 9 cut(s) 29, 170, 251, 634, 805, 1021, 1057, 1726, 2090
Sau96I GGNCC 2 cut(s) 227, 509
SchI GAGTC 4 cut(s) 182, 1121, 1496, 2244
ScrFI CCNGG 5 cut(s) 285, 372, 1133, 1205, 1520
SduI GDGCHC 3 cut(s) 1203, 1470, 2108
SfaNI GCATC 7 cut(s) 821, 979, 1081, 1289, 1741, 2074, 2176
SfcI CTRYAG 1 cut(s) 2112
SinI GGWCC 1 cut(s) 509
SmiMI CAYNNNNRTG 4 cut(s) 671, 813, 1150, 1581
SmlI CTYRAG 2 cut(s) 1999, 2099
SmoI CTYRAG 2 cut(s) 1999, 2099
SseBI AGGCCT 1 cut(s) 370
SsiI CCGC 6 cut(s) 137, 151, 750, 1400, 1822, 2129
SspMI CTAG 6 cut(s) 357, 504, 531, 1088, 1812, 2054
StuI AGGCCT 1 cut(s) 370
StyD4I CCNGG 5 cut(s) 283, 370, 1131, 1203, 1518
StyI CCWWGG 5 cut(s) 25, 861, 1462, 1851, 1920
TaiI ACGT 3 cut(s) 1056, 1477, 2141
TaqI TCGA 4 cut(s) 177, 223, 1125, 2233
TfiI GAWTC 8 cut(s) 605, 626, 950, 1403, 1543, 1844, 1904, 2036
Tru1I TTAA 6 cut(s) 894, 1326, 1556, 1682, 1697, 2199
Tru9I TTAA 6 cut(s) 894, 1326, 1556, 1682, 1697, 2199
TscAI CASTG 5 cut(s) 659, 707, 1279, 1324, 2113
TseFI GTSAC 5 cut(s) 265, 815, 1319, 1758, 1954
TseI GCWGC 6 cut(s) 242, 538, 1157, 1523, 2024, 2111
Tsp45I GTSAC 5 cut(s) 265, 815, 1319, 1758, 1954
TspGWI ACGGA 1 cut(s) 1225
TspRI CASTG 5 cut(s) 659, 707, 1279, 1324, 2113
Van91I CCANNNNNTGG 2 cut(s) 1390, 1979
VpaK11BI GGWCC 1 cut(s) 509
XapI RAATTY 6 cut(s) 156, 469, 590, 1255, 1342, 2179
XbaI TCTAGA 1 cut(s) 356
XcmI CCANNNNNNNNNTGG 4 cut(s) 449, 691, 1526, 1918
XmiI GTMKAC 2 cut(s) 902, 1247
XmnI GAANNNNTTC 1 cut(s) 1948
XspI CTAG 6 cut(s) 357, 504, 531, 1088, 1812, 2054
Zsp2I ATGCAT 1 cut(s) 776
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.