RchiOBHm_Chr2g0176461

Ring finger protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
2
OG0006714
Physical Location & Seq
Reverse (-)
88260038 .. 88264401
4364 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ54346

Sequence Viewer

Length: 2262 bp
ATGTCCATCTCGCCCAACCAAAGCCAAGGATCTAACTCGTCTTCTTCTTCAATTGCCTCTGTAAACCCTAATTCCCAACATGGCCACCTGTTCCTTTCCCAATCCCAATCTCCATCTCAGTCTCAGTCCCCGCCCTCTCTCTCCCGCCAAATTCTCACATTTGGATCACTCGACATCTCCGACTCTCAGTCTCCCCTCTCTGTGTCTCCCGATTTTCGAGGCCCATCGCTACCAGCTGCACAAGGATCTTCCCAACAGGTGACAGAGTTAGGACTTCCTGGTAAGAATGTTTTGCCTAACCACGAGACACACTCTCAGTCTCGCTCCCGAGGGGCTGGTTCATACCGGTCTAGAGGGAAAAGGCCTGGAAGCCAACAGAGTATCAGTAATGTTGCTTCTCATGGAAACTCAACCCAACCAGCAGGAAGAAAATCCCAGATGATGAATGGCAACCACCTCTTGAATTTTCATTATGACCCCATTTCCCGTCCTCAGACTAGAGGTCCTCCTCCTCCTCCTGCTAGAAGGCAGCATAAGAGAAAGCCCTACAACAAAGACTTATTTCTTCAGGCCAACTACAAATTTGTTGTGTTGGATTCGGGGAACTACTCAGCTGAATCAATGGATCCTGATAAGATGTTACAGTGGGAGGACATCATATGTGTGAGGTACTCCACCCCTACTGTGGTTCAGTGTCCAATTTGTTTGGAGTATCCTCTTTGCCCTCAGATAACCTCATGCGGGCATATATTCTGTTTCCCATGCATTCTCCAATACCTGCTGATGGGGAAGGAGGATCATAAGGGTGACTGCTGGAAAAGATGCCCATTGTGTTTTGTGATGATATCACCCAAGGATTTATACACCCTCTTCGTGGAGAATGTTAAGCAGTACACCGTTGGTGATACTATGGAGTTTATGCTTCTTAGTCGACAAAAGGATTCATTTACCATATCCCATAAAAGTAAAAAGGAGAAGGATGCCATGTCAGGTTGTGATGATGAAAGTTATGATCCCTTTTCAAAGTTTACATTTACATCAGACGTAGATCTTTCATTCAGAAAGGCAATATCAGAGCTAGATGCTTGGTTAGTCAGGGCAGAGTCAGGTCTTGTCGATGACCTGGAGAAGCTTCCATATGTATGTGCTGCAATGGAACAATTAGAACAGAGGAAGAAGTATTGGAATGAGCACCGGGCTATTGACAACAATAAACCTGGTTCATCCGTTGCCTTGTCTACTGCAAATTCTACTAATGGTAACAGTGAAGCATCAATAATTGGGGATGGAACTTTGTCTAATGGTTTCGGTGACTTTAATAAGTGTTCAGAGAATTTATTAGTGGACAAGTCAGATGATGGGACTTCATCTGACCAATCTGTGGATGTGGCGGAATCATTGGAAAGCCGTGAAAATGTTTTATCTTCTTCATATGATGAAAGCAAGACCGTCCAAGGGCACTCACGTTTCTCTGAAAGTGTAAAAGACAAGGACTCGTACAATTTCTACCAGGCTGCTGATGGTCAACACATGATTCTTCATCCATTAAACATGAAATGTCTTCTCCACCATTATGGGAGCCATGATATGCTACCACACAGAATAAGTGGAAGGATTTTGCAATTGGAGACAGTAACTCAGTCAGAAGCCATGAGAAGGCGTTATCGCTATTTAAGTCATTTCTCGTTAACAACAGTATTGCAGTTCTGTGAGATTGATCTGAGTGAGCTATTGTCTCCTGATAACCTGTCACCCTTTATGGAAGAGATAAAGAAGCGTGAAAGGCAGAGGAAGCAACTTGCTAGGAAGGAGCGGAAGGAGCAAATAAAGGCTGAATCTGCCATGGCATATCCCATCCCCATAGTAGCAGGCTTTGCACAGTCCTTTTATGATGAATCCCCCACATTCTCCATGGATGACTTTGAAGCTTTGGGAAGTTCTTCGGTGACCTCATCCAGCCCTCCAATTGTTGGAGAAAGGAGACTGTTCTCAAGTGTTACGAAGCTTGGTTTTGCTGCTGGACATGATTCTCCATCCTTGAAACTAGATGGGACTACTTCCCTGAATGGCAATGATGCAGGATCCTCTCTTGAGAGCACTGCTGGAGGCACTCAAAATGCAGGTGTAACGTCATTTGCTAATGTAATATCCAGAGCTAAACCCGAGGAAAATTTGGATGTACCGAAGATTAATGGTTCGGGGAAAAAGGGGAAGAAGCCAAGTCGAGTCCTCTTGTCAACAACCGGTGGTCGGCGCTATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
zf-C3HC4

Protein Analysis

753

Amino Acids

83.21

Weight (kDa)

7.05

Isoelectric Point (pI)

59.34

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
zf-C3HC4 PF00097 232 - 278 6.1e-06 Zinc finger, C3HC4 type (RING finger)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 2111
Acc36I ACCTGC 2 cut(s) 786, 2111
AccB7I CCANNNNNTGG 2 cut(s) 1381, 1970
AccBSI CCGCTC 1 cut(s) 1813
AccI GTMKAC 2 cut(s) 931, 1238
AciI CCGC 5 cut(s) 131, 145, 741, 1391, 1813
AclWI GGATC 9 cut(s) 37, 172, 253, 620, 633, 804, 1007, 2076, 2089
AcoI YGGCCR 1 cut(s) 82
AcsI RAATTY 6 cut(s) 150, 463, 581, 1246, 1333, 2170
AcuI CTGAAG 1 cut(s) 551
AfaI GTAC 4 cut(s) 671, 893, 1499, 2181
AfiI CCNNNNNNNGG 9 cut(s) 685, 741, 784, 874, 1381, 1455, 1656, 1970, 2250
AgeI ACCGGT 2 cut(s) 345, 2243
AgsI TTSAA 5 cut(s) 51, 463, 1023, 1925, 2041
AhdI GACNNNNNGTC 2 cut(s) 187, 501
AjnI CCWGG 5 cut(s) 277, 364, 1122, 1216, 1509
AluBI AGCT 8 cut(s) 236, 614, 1078, 1132, 1729, 1928, 2005, 2156
AluI AGCT 8 cut(s) 236, 614, 1078, 1132, 1729, 1928, 2005, 2156
Alw21I GWGCWC 2 cut(s) 1194, 2099
Alw26I GTCTC 8 cut(s) 126, 195, 210, 299, 324, 1622, 1740, 1975
AlwI GGATC 9 cut(s) 37, 172, 253, 620, 633, 804, 1007, 2076, 2089
Ama87I CYCGRG 2 cut(s) 327, 2162
AoxI GGCC 4 cut(s) 82, 220, 362, 570
ApeKI GCWGC 5 cut(s) 236, 529, 1148, 1514, 2015
ApoI RAATTY 6 cut(s) 150, 463, 581, 1246, 1333, 2170
AseI ATTAAT 1 cut(s) 2190
AsiGI ACCGGT 2 cut(s) 345, 2243
Asp700I GAANNNNTTC 1 cut(s) 1939
AspLEI GCGC 1 cut(s) 2256
AspS9I GGNCC 2 cut(s) 221, 503
AsuC2I CCSGG 1 cut(s) 1196
AsuHPI GGTGA 7 cut(s) 271, 818, 840, 914, 1322, 1743, 1957
AvaI CYCGRG 2 cut(s) 327, 2162
AvaII GGWCC 1 cut(s) 503
BaeGI GKGCMC 1 cut(s) 1461
BalI TGGCCA 1 cut(s) 84
BamHI GGATCC 2 cut(s) 625, 2081
BarI GAAGNNNNNNTAC 2 cut(s) 379, 411
BauI CACGAG 1 cut(s) 302
BbsI GAAGAC 2 cut(s) 33, 1553
Bbv12I GWGCWC 2 cut(s) 1194, 2099
BbvI GCAGC 5 cut(s) 223, 541, 1135, 1501, 2002
BceAI ACGGC 1 cut(s) 1392
BciT130I CCWGG 5 cut(s) 279, 366, 1124, 1218, 1511
BciVI GTATCC 1 cut(s) 723
BcnI CCSGG 1 cut(s) 1196
BcoDI GTCTC 8 cut(s) 126, 195, 210, 299, 324, 1622, 1740, 1975
BfaI CTAG 6 cut(s) 351, 498, 522, 1079, 1803, 2045
BfoI RGCGCY 1 cut(s) 2257
BfuAI ACCTGC 2 cut(s) 786, 2111
BfuI GTATCC 1 cut(s) 723
BglII AGATCT 1 cut(s) 1048
BisI GCNGC 5 cut(s) 237, 530, 1149, 1515, 2016
BlsI GCNGC 5 cut(s) 238, 531, 1150, 1516, 2017
Bme1390I CCNGG 6 cut(s) 279, 366, 1124, 1196, 1218, 1511
Bme18I GGWCC 1 cut(s) 503
BmeRI GACNNNNNGTC 2 cut(s) 187, 501
BmeT110I CYCGRG 2 cut(s) 327, 2162
BmgT120I GGNCC 2 cut(s) 221, 503
BmiI GGNNCC 3 cut(s) 627, 1580, 2083
BmrFI CCNGG 6 cut(s) 279, 366, 1124, 1196, 1218, 1511
BmsI GCATC 5 cut(s) 812, 970, 1072, 1280, 2065
BpiI GAAGAC 2 cut(s) 33, 1553
BplI GAGNNNNNCTC 2 cut(s) 296, 328
BpmI CTGGAG 2 cut(s) 1145, 2124
BpuEI CTTGAG 2 cut(s) 1975, 2111
BpuMI CCSGG 1 cut(s) 1196
BsaJI CCNNGG 7 cut(s) 25, 328, 852, 1453, 1842, 1911, 2163
BsaWI WCCGGW 2 cut(s) 345, 2243
Bsc4I CCNNNNNNNGG 9 cut(s) 685, 741, 784, 874, 1381, 1455, 1656, 1970, 2250
Bse118I RCCGGY 2 cut(s) 345, 2243
Bse3DI GCAATG 2 cut(s) 1158, 2077
BseBI CCWGG 5 cut(s) 279, 366, 1124, 1218, 1511
BseDI CCNNGG 7 cut(s) 25, 328, 852, 1453, 1842, 1911, 2163
BseLI CCNNNNNNNGG 9 cut(s) 685, 741, 784, 874, 1381, 1455, 1656, 1970, 2250
BseMI GCAATG 2 cut(s) 1158, 2077
BseMII CTCAG 9 cut(s) 131, 137, 200, 329, 506, 624, 740, 1652, 1712
BseRI GAGGAG 3 cut(s) 498, 501, 504
BseSI GKGCMC 1 cut(s) 1461
BseXI GCAGC 5 cut(s) 223, 541, 1135, 1501, 2002
BsgI GTGCAG 1 cut(s) 222
BshFI GGCC 4 cut(s) 84, 222, 364, 572
BshTI ACCGGT 2 cut(s) 345, 2243
BsiHKAI GWGCWC 2 cut(s) 1194, 2099
BsiHKCI CYCGRG 2 cut(s) 327, 2162
BsiSI CCGG 3 cut(s) 346, 1195, 2244
BslFI GGGAC 3 cut(s) 112, 1375, 2065
BslI CCNNNNNNNGG 9 cut(s) 685, 741, 784, 874, 1381, 1455, 1656, 1970, 2250
BsmAI GTCTC 8 cut(s) 126, 195, 210, 299, 324, 1622, 1740, 1975
BsmFI GGGAC 3 cut(s) 112, 1375, 2065
BsmI GAATGC 1 cut(s) 765
BsnI GGCC 4 cut(s) 84, 222, 364, 572
BsoBI CYCGRG 2 cut(s) 327, 2162
Bsp1286I GDGCHC 3 cut(s) 1194, 1461, 2099
Bsp143I GATC 9 cut(s) 29, 164, 245, 625, 796, 1012, 1048, 1717, 2081
Bsp19I CCATGG 2 cut(s) 1842, 1911
BspACI CCGC 5 cut(s) 131, 145, 741, 1391, 1813
BspANI GGCC 4 cut(s) 84, 222, 364, 572
BspCNI CTCAG 9 cut(s) 130, 136, 199, 328, 505, 623, 739, 1651, 1713
BspLI GGNNCC 3 cut(s) 627, 1580, 2083
BspMI ACCTGC 2 cut(s) 786, 2111
BspPI GGATC 9 cut(s) 37, 172, 253, 620, 633, 804, 1007, 2076, 2089
BsrBI CCGCTC 1 cut(s) 1813
BsrDI GCAATG 2 cut(s) 1158, 2077
BsrFI RCCGGY 2 cut(s) 345, 2243
BssAI RCCGGY 2 cut(s) 345, 2243
BssECI CCNNGG 7 cut(s) 25, 328, 852, 1453, 1842, 1911, 2163
BssMI GATC 9 cut(s) 29, 164, 245, 625, 796, 1012, 1048, 1717, 2081
BssSI CACGAG 1 cut(s) 302
BssT1I CCWWGG 5 cut(s) 25, 852, 1453, 1842, 1911
Bst2BI CACGAG 1 cut(s) 302
Bst2UI CCWGG 5 cut(s) 279, 366, 1124, 1218, 1511
Bst4CI ACNGT 9 cut(s) 645, 685, 898, 1265, 1450, 1633, 1696, 1881, 1986
Bst6I CTCTTC 2 cut(s) 875, 1758
BstAPI GCANNNNNTGC 1 cut(s) 1874
BstC8I GCNNGC 2 cut(s) 743, 1870
BstDSI CCRYGG 2 cut(s) 1842, 1911
BstEII GGTNACC 1 cut(s) 1945
BstH2I RGCGCY 1 cut(s) 2257
BstHHI GCGC 1 cut(s) 2256
BstKTI GATC 9 cut(s) 32, 167, 248, 628, 799, 1015, 1051, 1720, 2084
BstMAI GTCTC 8 cut(s) 126, 195, 210, 299, 324, 1622, 1740, 1975
BstMBI GATC 9 cut(s) 29, 164, 245, 625, 796, 1012, 1048, 1717, 2081
BstMWI GCNNNNNNNGC 5 cut(s) 1783, 1792, 1819, 1838, 1874
BstNI CCWGG 5 cut(s) 279, 366, 1124, 1218, 1511
BstPI GGTNACC 1 cut(s) 1945
BstSCI CCNGG 6 cut(s) 277, 364, 1122, 1194, 1216, 1509
BstSLI GKGCMC 1 cut(s) 1461
BstV1I GCAGC 5 cut(s) 223, 541, 1135, 1501, 2002
BstV2I GAAGAC 2 cut(s) 33, 1553
BstX2I RGATCY 5 cut(s) 29, 245, 625, 1048, 2081
BstXI CCANNNNNNTGG 1 cut(s) 1574
BstYI RGATCY 5 cut(s) 29, 245, 625, 1048, 2081
BsuI GTATCC 1 cut(s) 723
BsuRI GGCC 4 cut(s) 84, 222, 364, 572
BtgI CCRYGG 2 cut(s) 1842, 1911
BtgZI GCGATG 1 cut(s) 210
BtsI GCAGTG 1 cut(s) 2097
BtsIMutI CAGTG 4 cut(s) 650, 698, 1270, 2097
BveI ACCTGC 2 cut(s) 786, 2111
Cac8I GCNNGC 2 cut(s) 743, 1870
CfoI GCGC 1 cut(s) 2256
Cfr10I RCCGGY 2 cut(s) 345, 2243
Cfr13I GGNCC 2 cut(s) 221, 503
CsiI ACCWGGT 1 cut(s) 1216
Csp6I GTAC 4 cut(s) 670, 892, 1498, 2180
CspAI ACCGGT 2 cut(s) 345, 2243
CviQI GTAC 4 cut(s) 670, 892, 1498, 2180
DpnI GATC 9 cut(s) 31, 166, 247, 627, 798, 1014, 1050, 1719, 2083
DpnII GATC 9 cut(s) 29, 164, 245, 625, 796, 1012, 1048, 1717, 2081
DriI GACNNNNNGTC 2 cut(s) 187, 501
EaeI YGGCCR 1 cut(s) 82
Eam1104I CTCTTC 2 cut(s) 875, 1758
Eam1105I GACNNNNNGTC 2 cut(s) 187, 501
EarI CTCTTC 2 cut(s) 875, 1758
EciI GGCGGA 1 cut(s) 1406
Eco130I CCWWGG 5 cut(s) 25, 852, 1453, 1842, 1911
Eco147I AGGCCT 1 cut(s) 364
Eco32I GATATC 1 cut(s) 846
Eco47I GGWCC 1 cut(s) 503
Eco57I CTGAAG 1 cut(s) 551
Eco88I CYCGRG 2 cut(s) 327, 2162
Eco91I GGTNACC 1 cut(s) 1945
EcoO109I RGGNCCY 1 cut(s) 503
EcoO65I GGTNACC 1 cut(s) 1945
EcoRII CCWGG 5 cut(s) 277, 364, 1122, 1216, 1509
EcoRV GATATC 1 cut(s) 846
EcoT14I CCWWGG 5 cut(s) 25, 852, 1453, 1842, 1911
EcoT22I ATGCAT 1 cut(s) 767
ErhI CCWWGG 5 cut(s) 25, 852, 1453, 1842, 1911
FaqI GGGAC 3 cut(s) 112, 1375, 2065
FauI CCCGC 3 cut(s) 138, 152, 734
FauNDI CATATG 3 cut(s) 659, 1138, 1432
FblI GTMKAC 2 cut(s) 931, 1238
Fnu4HI GCNGC 5 cut(s) 237, 530, 1149, 1515, 2016
Fsp4HI GCNGC 5 cut(s) 237, 530, 1149, 1515, 2016
FspBI CTAG 6 cut(s) 351, 498, 522, 1079, 1803, 2045
GlaI GCGC 1 cut(s) 2255
GluI GCNGC 5 cut(s) 237, 530, 1149, 1515, 2016
GsuI CTGGAG 2 cut(s) 1145, 2124
HaeII RGCGCY 1 cut(s) 2257
HaeIII GGCC 4 cut(s) 84, 222, 364, 572
HapII CCGG 3 cut(s) 346, 1195, 2244
HhaI GCGC 1 cut(s) 2256
Hin6I GCGC 1 cut(s) 2254
HinP1I GCGC 1 cut(s) 2254
HincII GTYRAC 4 cut(s) 932, 1526, 1689, 2238
HindII GTYRAC 4 cut(s) 932, 1526, 1689, 2238
HindIII AAGCTT 3 cut(s) 1130, 1926, 2003
HpaI GTTAAC 1 cut(s) 1689
HpaII CCGG 3 cut(s) 346, 1195, 2244
HphI GGTGA 7 cut(s) 271, 818, 840, 914, 1322, 1743, 1957
Hpy166II GTNNAC 9 cut(s) 64, 894, 932, 1029, 1239, 1345, 1526, 1689, 2238
Hpy188III TCNNGA 8 cut(s) 209, 327, 351, 460, 629, 1739, 2090, 2151
Hpy8I GTNNAC 9 cut(s) 64, 894, 932, 1029, 1239, 1345, 1526, 1689, 2238
HpyAV CCTTC 7 cut(s) 519, 784, 970, 1605, 1650, 1801, 1810
HpyCH4III ACNGT 9 cut(s) 645, 685, 898, 1265, 1450, 1633, 1696, 1881, 1986
HpyCH4IV ACGT 3 cut(s) 1044, 1465, 2129
HpyCH4V TGCA 9 cut(s) 239, 765, 1151, 1244, 1621, 1702, 1877, 2078, 2120
HpyF10VI GCNNNNNNNGC 5 cut(s) 1783, 1792, 1819, 1838, 1874
HpySE526I ACGT 3 cut(s) 1044, 1465, 2129
HspAI GCGC 1 cut(s) 2254
KspAI GTTAAC 1 cut(s) 1689
Kzo9I GATC 9 cut(s) 29, 164, 245, 625, 796, 1012, 1048, 1717, 2081
LmnI GCTCC 4 cut(s) 329, 1578, 1810, 1819
Lsp1109I GCAGC 5 cut(s) 223, 541, 1135, 1501, 2002
LweI GCATC 5 cut(s) 812, 970, 1072, 1280, 2065
MabI ACCWGGT 1 cut(s) 1216
MaeI CTAG 6 cut(s) 351, 498, 522, 1079, 1803, 2045
MaeII ACGT 3 cut(s) 1044, 1465, 2129
MalI GATC 9 cut(s) 31, 166, 247, 627, 798, 1014, 1050, 1719, 2083
MbiI CCGCTC 1 cut(s) 1813
MboI GATC 9 cut(s) 29, 164, 245, 625, 796, 1012, 1048, 1717, 2081
MfeI CAATTG 3 cut(s) 51, 1622, 1965
MflI RGATCY 5 cut(s) 29, 245, 625, 1048, 2081
MhlI GDGCHC 3 cut(s) 1194, 1461, 2099
MlsI TGGCCA 1 cut(s) 84
MluNI TGGCCA 1 cut(s) 84
MlyI GAGTC 4 cut(s) 176, 1112, 1487, 2235
MmeI TCCRAC 3 cut(s) 204, 573, 1951
Mox20I TGGCCA 1 cut(s) 84
Mph1103I ATGCAT 1 cut(s) 767
MroXI GAANNNNTTC 1 cut(s) 1939
MscI TGGCCA 1 cut(s) 84
MseI TTAA 6 cut(s) 885, 1317, 1547, 1673, 1688, 2190
MslI CAYNNNNRTG 4 cut(s) 662, 804, 1141, 1572
Msp20I TGGCCA 1 cut(s) 84
MspA1I CMGCKG 2 cut(s) 236, 614
MspI CCGG 3 cut(s) 346, 1195, 2244
MspR9I CCNGG 6 cut(s) 279, 366, 1124, 1196, 1218, 1511
MunI CAATTG 3 cut(s) 51, 1622, 1965
Mva1269I GAATGC 1 cut(s) 765
MvaI CCWGG 5 cut(s) 279, 366, 1124, 1218, 1511
MwoI GCNNNNNNNGC 5 cut(s) 1783, 1792, 1819, 1838, 1874
NciI CCSGG 1 cut(s) 1196
NcoI CCATGG 2 cut(s) 1842, 1911
NdeI CATATG 3 cut(s) 659, 1138, 1432
NdeII GATC 9 cut(s) 29, 164, 245, 625, 796, 1012, 1048, 1717, 2081
NlaIV GGNNCC 3 cut(s) 627, 1580, 2083
NmuCI GTSAC 5 cut(s) 259, 806, 1310, 1749, 1945
NsiI ATGCAT 1 cut(s) 767
PaqCI CACCTGC 1 cut(s) 2111
PceI AGGCCT 1 cut(s) 364
PcsI WCGNNNNNNNCGW 1 cut(s) 177
PctI GAATGC 1 cut(s) 765
PdmI GAANNNNTTC 1 cut(s) 1939
PfeI GAWTC 8 cut(s) 596, 617, 941, 1394, 1534, 1835, 1895, 2027
PflMI CCANNNNNTGG 2 cut(s) 1381, 1970
PinAI ACCGGT 2 cut(s) 345, 2243
PkrI GCNGC 5 cut(s) 238, 531, 1150, 1516, 2017
PleI GAGTC 4 cut(s) 176, 1111, 1487, 2234
PpsI GAGTC 4 cut(s) 176, 1111, 1487, 2234
PpuMI RGGWCCY 1 cut(s) 503
PshBI ATTAAT 1 cut(s) 2190
Psp5II RGGWCCY 1 cut(s) 503
Psp6I CCWGG 5 cut(s) 277, 364, 1122, 1216, 1509
PspEI GGTNACC 1 cut(s) 1945
PspGI CCWGG 5 cut(s) 277, 364, 1122, 1216, 1509
PspN4I GGNNCC 3 cut(s) 627, 1580, 2083
PspPI GGNCC 2 cut(s) 221, 503
PspPPI RGGWCCY 1 cut(s) 503
PsuI RGATCY 5 cut(s) 29, 245, 625, 1048, 2081
PvuII CAGCTG 2 cut(s) 236, 614
RsaI GTAC 4 cut(s) 671, 893, 1499, 2181
RsaNI GTAC 4 cut(s) 670, 892, 1498, 2180
RseI CAYNNNNRTG 4 cut(s) 662, 804, 1141, 1572
SalI GTCGAC 1 cut(s) 930
SaqAI TTAA 6 cut(s) 885, 1317, 1547, 1673, 1688, 2190
SatI GCNGC 5 cut(s) 237, 530, 1149, 1515, 2016
Sau3AI GATC 9 cut(s) 29, 164, 245, 625, 796, 1012, 1048, 1717, 2081
Sau96I GGNCC 2 cut(s) 221, 503
SchI GAGTC 4 cut(s) 176, 1112, 1487, 2235
ScrFI CCNGG 6 cut(s) 279, 366, 1124, 1196, 1218, 1511
SduI GDGCHC 3 cut(s) 1194, 1461, 2099
SexAI ACCWGGT 1 cut(s) 1216
SfaNI GCATC 5 cut(s) 812, 970, 1072, 1280, 2065
SinI GGWCC 1 cut(s) 503
SmiMI CAYNNNNRTG 4 cut(s) 662, 804, 1141, 1572
SmlI CTYRAG 2 cut(s) 1990, 2090
SmoI CTYRAG 2 cut(s) 1990, 2090
SseBI AGGCCT 1 cut(s) 364
SsiI CCGC 5 cut(s) 131, 145, 741, 1391, 1813
SspMI CTAG 6 cut(s) 351, 498, 522, 1079, 1803, 2045
StuI AGGCCT 1 cut(s) 364
StyD4I CCNGG 6 cut(s) 277, 364, 1122, 1194, 1216, 1509
StyI CCWWGG 5 cut(s) 25, 852, 1453, 1842, 1911
TaaI ACNGT 9 cut(s) 645, 685, 898, 1265, 1450, 1633, 1696, 1881, 1986
TaiI ACGT 3 cut(s) 1047, 1468, 2132
TaqI TCGA 5 cut(s) 171, 217, 931, 1116, 2224
TatI WGTACW 1 cut(s) 891
TfiI GAWTC 8 cut(s) 596, 617, 941, 1394, 1534, 1835, 1895, 2027
Tru1I TTAA 6 cut(s) 885, 1317, 1547, 1673, 1688, 2190
Tru9I TTAA 6 cut(s) 885, 1317, 1547, 1673, 1688, 2190
TscAI CASTG 4 cut(s) 650, 698, 1270, 2104
TseFI GTSAC 5 cut(s) 259, 806, 1310, 1749, 1945
TseI GCWGC 5 cut(s) 236, 529, 1148, 1514, 2015
Tsp45I GTSAC 5 cut(s) 259, 806, 1310, 1749, 1945
TspGWI ACGGA 1 cut(s) 1216
TspRI CASTG 4 cut(s) 650, 698, 1270, 2104
Van91I CCANNNNNTGG 2 cut(s) 1381, 1970
VpaK11BI GGWCC 1 cut(s) 503
VspI ATTAAT 1 cut(s) 2190
XapI RAATTY 6 cut(s) 150, 463, 581, 1246, 1333, 2170
XbaI TCTAGA 1 cut(s) 350
XcmI CCANNNNNNNNNTGG 4 cut(s) 443, 682, 1517, 1909
XmiI GTMKAC 2 cut(s) 931, 1238
XmnI GAANNNNTTC 1 cut(s) 1939
XspI CTAG 6 cut(s) 351, 498, 522, 1079, 1803, 2045
Zsp2I ATGCAT 1 cut(s) 767
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.