MD17G1007100.v1.1

Ring finger protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr17
OG0006714
Physical Location & Seq
Forward (+)
472823 .. 477103
4281 bp
Loading structure...
UTR
Exon/CDS
Intron
MD17G1007100.v1.1.491

Sequence Viewer

Length: 2331 bp
ATGTCCATCTTGCCCAACCAAGACCAAGGATCTATATCATCGTCTACCTCTTCAGCTCCCTCTATAAACCCTAACTCCCAACATGGACACCGCCATCACCACGTTTCCCTTTCTCAATCCCAATCCCAGTCGCTGTCTCCGCCGGATCCCTCCCGCCAAATTCTCCAATTTGGATCGCTTCGGATCTCCGACTCTCAATCTAGCTCCTCCGCTACTTCTTCAGGCCTGTCGCCATCGGCACCAGCTGCAGAAGATTCTGGTGGATCTTCCCAGCAGGTGACTGAGTTAGGGATACCTTGGGGTAACCAGGCTTTACCCAATAACCTCCACCACACACATTCACAGTGTCACTCTGGTGGAGGTGGACGAGGGGTTGGATCACCCTGGTCTAGAGGGAAAAGGTCAGGAACCGATGGTTCTAGTTCAACTCAACATAGTATGGGGTCTGTTGCTTCTCATGGAAACTCCACTCATCAAACAGGAAAGAAAACCCAGCTGATGAATGGCAACCACTTGTTGAATTTTTATTATGACCCCATATCTCGTCCTCAGCATAGAGCTGCTCCTCCTTCTTCAAGAAGGCAACACAAGAGGAAGCCATACAACAAAGATCTATTTCTTCAGGCTAACTACAAATTCGTAGTGTTAGATTCAGTAAACTACTCAGCTGAAGCGATGGATCCAGATAAGGTGTTACAGTGGGAGGACATCATTTGCGTGAGATATTCCACCCCAACTGTGGTTCAGTGTCCCATTTGTCTGGAATATCCTCTATGTCCGCAGATAACCTCATGTGGACATATCTTCTGTTTCCCATGTATTCTGCAATACTTGTTGATGGGGAAGGAGGATCATAAAGGAGACTGTTGGAAAAGTTGCCCATTGTGTTTTGTGATGATATCCCCGAAGGATTTATACACTCTATTCGTGGAGAATGTTAAGCAGTATTGTGTTGGTGATACTATAGAGTTTATGCTTATTAGTCGACAAAAGGATTCATTTACTTTATCCCATAAAAGTAAACAAGAGAAAGGTGCTGTTGGAGGTTGCGATGATGAAAGCTATGATCCATTTTCAAAGTTTACATTTACTTCAGATGTAGATCTTTCAGTCAGAAAAGCAATATCAGAGTTAGATGGTTGGTTGGTCAGGGCAGAGTCGGGGCTTGTTGATGACCTAGAGAAGCTTCCATATGTATGTGCTGCAATGGAACAATTAGAACAGAGGAAGAAATATTGGAACGAGCACGGGGCTAGCAACAGTAATAAATCTTGTAAATATAATAATCATAATACTGGTTCCATCTTGTCAACTGAAAAAGCTACAATTGGTAACAATGAAGCATCTACATTTGGACAGGCAAATCCGTCCAATGAAGTCTATGACGGTAATGTGTGTTCGGACAGTATATCTGTGGAGAAGTCAGATGATGGAACTTGTTCTGACCAATCTGTGGATGCAGCTGAATCATTGGAAGGCCAAGAAAATGTTTTTTCTTCTTCATATGATGAAAGCAACAGTGCCCGAGGGGACTCACATGACTCTGGAAGTGTAAAGGAGAAGGAATCATACAATTTCTACCAGGCAGCTGATGGTCAGCACATCATTATTCATCCGTTGAACATGAAATGCCTTCTACACCACTATGGGAGCCATGATATGCTACCACACAGGGTAAGTGGAAAAATTTTGCAATTGGAGACTGTGACTCAGACAGAAGCTATGAGGAGGCGCTACCGCTACTTGAGTCATTTTTCTTTAACAACAATACTCCAGTTTTGTGAGATTGATCTCAGTGAGGTATTGTCTCCTGATGCGTTGTCTCCCTTTATGGAAGACATAAAGAAGCGTGAACAGAAAAGGAAGCAACTTGCTAGGAAGGAGCAAAAGGAGAAAATGAAGGCTGAATCTACCATGGCATATCCCATCCCCATAGTAGCAGGTTATGGGCAATCCTTGCATGAGGGATCCCCTACATTTTCCATGGATGACTTCGAGGCTTTGGGAAGTAGTACAGTGACATCATCAAGCCCTCCTGTTGTTGGGGAAAGGAAGCTCTTCTCGAGTGTTACAAAGCTTGGTTTTGCTGCTGCGCATGATTCTCCAGCGCTGAAACTAGAAGGAAGCAATTCTCTGAATGGCAATGATGCAGGGAGAGTCTTTCCCAAGACAAATGGTACCCAGAATGCGGGTGTTGCGTCATTTGCTAATATAATCGCCAGAGCTAAGCCTGGTGAAAATATGGATCCACCCATGATAAATGATTCGGGAAAGAAGGGAAAGAAACAGAGTCGAGTCCTTTTGTCAACCGCTAGTGGTCGGCGCTACTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
zf-C3HC4

Protein Analysis

777

Amino Acids

85.05

Weight (kDa)

6.59

Isoelectric Point (pI)

54.46

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
zf-C3HC4 PF00097 250 - 296 7.2e-06 Zinc finger, C3HC4 type (RING finger)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 265
Acc16I TGCGCA 1 cut(s) 2094
Acc36I ACCTGC 2 cut(s) 265, 1931
Acc65I GGTACC 1 cut(s) 2177
AccB1I GGYRCC 2 cut(s) 238, 2177
AccB7I CCANNNNNTGG 1 cut(s) 1453
AccI GTMKAC 2 cut(s) 44, 985
AciI CCGC 8 cut(s) 91, 140, 154, 210, 779, 1738, 2189, 2310
AcsI RAATTY 4 cut(s) 159, 520, 635, 1686
AcuI CTGAAG 5 cut(s) 36, 204, 605, 690, 1077
AfaI GTAC 2 cut(s) 2014, 2179
AfeI AGCGCT 1 cut(s) 2109
AfiI CCNNNNNNNGG 4 cut(s) 739, 1453, 2042, 2188
AgsI TTSAA 5 cut(s) 426, 520, 576, 1077, 1621
AjnI CCWGG 4 cut(s) 306, 383, 1581, 2230
AleI CACNNNNGTG 1 cut(s) 354
Alw21I GWGCWC 1 cut(s) 1248
Alw26I GTCTC 5 cut(s) 141, 855, 1694, 1812, 1827
AlwNI CAGNNNCTG 1 cut(s) 133
Ama87I CYCGRG 2 cut(s) 1524, 2062
Aor51HI AGCGCT 1 cut(s) 2109
AoxI GGCC 2 cut(s) 223, 1477
ApeKI GCWGC 7 cut(s) 245, 560, 1202, 1460, 1586, 2087, 2090
ApoI RAATTY 4 cut(s) 159, 520, 635, 1686
Asp700I GAANNNNTTC 3 cut(s) 1438, 2057, 2128
Asp718I GGTACC 1 cut(s) 2177
AspLEI GCGC 4 cut(s) 1734, 2095, 2110, 2325
AsuHPI GGTGA 5 cut(s) 89, 289, 372, 968, 2246
AsuNHI GCTAGC 1 cut(s) 1253
AvaI CYCGRG 2 cut(s) 1524, 2062
BaeGI GKGCMC 1 cut(s) 1525
BamHI GGATCC 4 cut(s) 145, 679, 1967, 2245
BanI GGYRCC 2 cut(s) 238, 2177
BarI GAAGNNNNNNTAC 4 cut(s) 899, 931, 1553, 1585
BbsI GAAGAC 1 cut(s) 1842
Bbv12I GWGCWC 1 cut(s) 1248
BbvCI CCTCAGC 1 cut(s) 549
BbvI GCAGC 7 cut(s) 232, 547, 1189, 1472, 1598, 2074, 2077
BciT130I CCWGG 4 cut(s) 308, 385, 1583, 2232
BciVI GTATCC 1 cut(s) 285
BcoDI GTCTC 5 cut(s) 141, 855, 1694, 1812, 1827
BfaI CTAG 8 cut(s) 201, 390, 420, 1178, 1254, 1875, 2117, 2313
BfmI CTRYAG 2 cut(s) 246, 963
BfoI RGCGCY 3 cut(s) 1735, 2111, 2326
BfuAI ACCTGC 2 cut(s) 265, 1931
BfuI GTATCC 1 cut(s) 285
BglII AGATCT 2 cut(s) 610, 1102
BisI GCNGC 7 cut(s) 246, 561, 1203, 1461, 1587, 2088, 2091
BlpI GCTNAGC 1 cut(s) 2226
BlsI GCNGC 7 cut(s) 247, 562, 1204, 1462, 1588, 2089, 2092
Bme1390I CCNGG 4 cut(s) 308, 385, 1583, 2232
BmeT110I CYCGRG 2 cut(s) 1524, 2062
BmiI GGNNCC 9 cut(s) 147, 240, 409, 681, 1300, 1652, 1969, 2179, 2247
BmrFI CCNGG 4 cut(s) 308, 385, 1583, 2232
BmrI ACTGGG 1 cut(s) 121
BmsI GCATC 4 cut(s) 1352, 1447, 1804, 2137
BmtI GCTAGC 1 cut(s) 1257
BmuI ACTGGG 1 cut(s) 121
BpiI GAAGAC 1 cut(s) 1842
BpmI CTGGAG 2 cut(s) 1757, 2088
Bpu10I CCTNAGC 1 cut(s) 549
Bpu1102I GCTNAGC 1 cut(s) 2226
BpuEI CTTGAG 1 cut(s) 1765
BsaBI GATNNNNATC 2 cut(s) 34, 1101
BsaJI CCNNGG 6 cut(s) 25, 296, 383, 1525, 1914, 1983
BsaXI ACNNNNNCTCC 2 cut(s) 59, 89
Bsc4I CCNNNNNNNGG 4 cut(s) 739, 1453, 2042, 2188
Bse1I ACTGG 3 cut(s) 127, 1300, 1774
Bse3DI GCAATG 2 cut(s) 1212, 2149
Bse8I GATNNNNATC 2 cut(s) 34, 1101
BseBI CCWGG 4 cut(s) 308, 385, 1583, 2232
BseDI CCNNGG 6 cut(s) 25, 296, 383, 1525, 1914, 1983
BseGI GGATG 4 cut(s) 1462, 1612, 1926, 1993
BseJI GATNNNNATC 2 cut(s) 34, 1101
BseLI CCNNNNNNNGG 4 cut(s) 739, 1453, 2042, 2188
BseMI GCAATG 2 cut(s) 1212, 2149
BseMII CTCAG 5 cut(s) 273, 563, 678, 1724, 1807
BseNI ACTGG 3 cut(s) 127, 1300, 1774
BseRI GAGGAG 3 cut(s) 196, 555, 1741
BseSI GKGCMC 1 cut(s) 1525
BseXI GCAGC 7 cut(s) 232, 547, 1189, 1472, 1598, 2074, 2077
BseYI CCCAGC 2 cut(s) 270, 492
BshFI GGCC 2 cut(s) 225, 1479
BshNI GGYRCC 2 cut(s) 238, 2177
BsiHKAI GWGCWC 1 cut(s) 1248
BsiHKCI CYCGRG 2 cut(s) 1524, 2062
BsiSI CCGG 1 cut(s) 143
BslFI GGGAC 2 cut(s) 735, 1544
BslI CCNNNNNNNGG 4 cut(s) 739, 1453, 2042, 2188
BsmAI GTCTC 5 cut(s) 141, 855, 1694, 1812, 1827
BsmFI GGGAC 2 cut(s) 735, 1544
BsmI GAATGC 1 cut(s) 2191
BsnI GGCC 2 cut(s) 225, 1479
BsoBI CYCGRG 2 cut(s) 1524, 2062
Bsp1286I GDGCHC 2 cut(s) 1248, 1525
Bsp1720I GCTNAGC 1 cut(s) 2226
Bsp19I CCATGG 2 cut(s) 1914, 1983
BspACI CCGC 8 cut(s) 91, 140, 154, 210, 779, 1738, 2189, 2310
BspANI GGCC 2 cut(s) 225, 1479
BspCNI CTCAG 5 cut(s) 274, 562, 677, 1723, 1806
BspLI GGNNCC 9 cut(s) 147, 240, 409, 681, 1300, 1652, 1969, 2179, 2247
BspMAI CTGCAG 1 cut(s) 250
BspMI ACCTGC 2 cut(s) 265, 1931
BspOI GCTAGC 1 cut(s) 1257
BspQI GCTCTTC 1 cut(s) 2063
BspT107I GGYRCC 2 cut(s) 238, 2177
BsrDI GCAATG 2 cut(s) 1212, 2149
BsrI ACTGG 3 cut(s) 127, 1300, 1774
BssECI CCNNGG 6 cut(s) 25, 296, 383, 1525, 1914, 1983
BssT1I CCWWGG 4 cut(s) 25, 296, 1914, 1983
Bst2UI CCWGG 4 cut(s) 308, 385, 1583, 2232
Bst6I CTCTTC 2 cut(s) 55, 2063
BstAPI GCANNNNNTGC 2 cut(s) 245, 1957
BstC8I GCNNGC 1 cut(s) 1255
BstDEI CTNAG 6 cut(s) 282, 549, 664, 1710, 1793, 2226
BstDSI CCRYGG 2 cut(s) 1914, 1983
BstEII GGTNACC 1 cut(s) 302
BstF5I GGATG 4 cut(s) 1462, 1612, 1926, 1993
BstH2I RGCGCY 3 cut(s) 1735, 2111, 2326
BstHHI GCGC 4 cut(s) 1734, 2095, 2110, 2325
BstMAI GTCTC 5 cut(s) 141, 855, 1694, 1812, 1827
BstMWI GCNNNNNNNGC 5 cut(s) 139, 245, 1957, 2195, 2204
BstNI CCWGG 4 cut(s) 308, 385, 1583, 2232
BstPI GGTNACC 1 cut(s) 302
BstSCI CCNGG 4 cut(s) 306, 383, 1581, 2230
BstSFI CTRYAG 2 cut(s) 246, 963
BstSLI GKGCMC 1 cut(s) 1525
BstV1I GCAGC 7 cut(s) 232, 547, 1189, 1472, 1598, 2074, 2077
BstV2I GAAGAC 1 cut(s) 1842
BstX2I RGATCY 9 cut(s) 29, 145, 183, 263, 610, 679, 1102, 1967, 2245
BstXI CCANNNNNNTGG 1 cut(s) 760
BstYI RGATCY 9 cut(s) 29, 145, 183, 263, 610, 679, 1102, 1967, 2245
BsuI GTATCC 1 cut(s) 285
BsuRI GGCC 2 cut(s) 225, 1479
BtgI CCRYGG 2 cut(s) 1914, 1983
BtgZI GCGATG 2 cut(s) 689, 1065
BtsCI GGATG 4 cut(s) 1462, 1612, 1926, 1993
BtsIMutI CAGTG 6 cut(s) 350, 704, 752, 1525, 1801, 2022
BveI ACCTGC 2 cut(s) 265, 1931
Cac8I GCNNGC 1 cut(s) 1255
CaiI CAGNNNCTG 1 cut(s) 133
CfoI GCGC 4 cut(s) 1734, 2095, 2110, 2325
CseI GACGC 1 cut(s) 2187
Csp6I GTAC 2 cut(s) 2013, 2178
CviQI GTAC 2 cut(s) 2013, 2178
DdeI CTNAG 6 cut(s) 282, 549, 664, 1710, 1793, 2226
Eam1104I CTCTTC 2 cut(s) 55, 2063
EarI CTCTTC 2 cut(s) 55, 2063
EciI GGCGGA 1 cut(s) 129
Eco130I CCWWGG 4 cut(s) 25, 296, 1914, 1983
Eco147I AGGCCT 1 cut(s) 225
Eco32I GATATC 1 cut(s) 900
Eco47III AGCGCT 1 cut(s) 2109
Eco57I CTGAAG 5 cut(s) 36, 204, 605, 690, 1077
Eco88I CYCGRG 2 cut(s) 1524, 2062
Eco91I GGTNACC 1 cut(s) 302
EcoO65I GGTNACC 1 cut(s) 302
EcoRII CCWGG 4 cut(s) 306, 383, 1581, 2230
EcoRV GATATC 1 cut(s) 900
EcoT14I CCWWGG 4 cut(s) 25, 296, 1914, 1983
ErhI CCWWGG 4 cut(s) 25, 296, 1914, 1983
FaqI GGGAC 2 cut(s) 735, 1544
FauI CCCGC 2 cut(s) 161, 2182
FauNDI CATATG 2 cut(s) 1192, 1504
FblI GTMKAC 2 cut(s) 44, 985
Fnu4HI GCNGC 7 cut(s) 246, 561, 1203, 1461, 1587, 2088, 2091
FokI GGATG 4 cut(s) 1469, 1599, 1913, 2000
Fsp4HI GCNGC 7 cut(s) 246, 561, 1203, 1461, 1587, 2088, 2091
FspBI CTAG 8 cut(s) 201, 390, 420, 1178, 1254, 1875, 2117, 2313
FspI TGCGCA 1 cut(s) 2094
GlaI GCGC 4 cut(s) 1733, 2094, 2109, 2324
GluI GCNGC 7 cut(s) 246, 561, 1203, 1461, 1587, 2088, 2091
GsaI CCCAGC 2 cut(s) 274, 496
GsuI CTGGAG 2 cut(s) 1757, 2088
HaeII RGCGCY 3 cut(s) 1735, 2111, 2326
HaeIII GGCC 2 cut(s) 225, 1479
HapII CCGG 1 cut(s) 143
HgaI GACGC 1 cut(s) 2187
HhaI GCGC 4 cut(s) 1734, 2095, 2110, 2325
Hin6I GCGC 4 cut(s) 1732, 2093, 2108, 2323
HinP1I GCGC 4 cut(s) 1732, 2093, 2108, 2323
HincII GTYRAC 3 cut(s) 986, 1311, 2307
HindII GTYRAC 3 cut(s) 986, 1311, 2307
HindIII AAGCTT 2 cut(s) 1184, 2075
HpaII CCGG 1 cut(s) 143
HphI GGTGA 5 cut(s) 89, 289, 372, 968, 2246
Hpy188III TCNNGA 9 cut(s) 390, 405, 576, 683, 761, 1545, 1811, 2062, 2268
HpyCH4IV ACGT 1 cut(s) 102
HpyCH4V TGCA 7 cut(s) 248, 826, 1205, 1460, 1693, 1960, 2150
HpyF10VI GCNNNNNNNGC 5 cut(s) 139, 245, 1957, 2195, 2204
HpyF3I CTNAG 6 cut(s) 282, 549, 664, 1710, 1793, 2226
HpySE526I ACGT 1 cut(s) 102
HspAI GCGC 4 cut(s) 1732, 2093, 2108, 2323
KpnI GGTACC 1 cut(s) 2181
LguI GCTCTTC 1 cut(s) 2063
LmnI GCTCC 5 cut(s) 61, 209, 568, 1650, 1882
Lsp1109I GCAGC 7 cut(s) 232, 547, 1189, 1472, 1598, 2074, 2077
LweI GCATC 4 cut(s) 1352, 1447, 1804, 2137
MaeI CTAG 8 cut(s) 201, 390, 420, 1178, 1254, 1875, 2117, 2313
MaeII ACGT 1 cut(s) 102
MaeIII GTNAC 8 cut(s) 277, 302, 347, 693, 1331, 1705, 2017, 2068
MfeI CAATTG 2 cut(s) 1326, 1694
MflI RGATCY 9 cut(s) 29, 145, 183, 263, 610, 679, 1102, 1967, 2245
MhlI GDGCHC 2 cut(s) 1248, 1525
MlyI GAGTC 9 cut(s) 185, 1166, 1526, 1535, 1702, 1756, 2166, 2299, 2304
MmeI TCCRAC 4 cut(s) 213, 355, 848, 1021
MroXI GAANNNNTTC 3 cut(s) 1438, 2057, 2128
MseI TTAA 2 cut(s) 939, 1760
MslI CAYNNNNRTG 4 cut(s) 354, 716, 1195, 1644
MspA1I CMGCKG 5 cut(s) 245, 496, 668, 1463, 1589
MspI CCGG 1 cut(s) 143
MspR9I CCNGG 4 cut(s) 308, 385, 1583, 2232
MunI CAATTG 2 cut(s) 1326, 1694
Mva1269I GAATGC 1 cut(s) 2191
MvaI CCWGG 4 cut(s) 308, 385, 1583, 2232
MwoI GCNNNNNNNGC 5 cut(s) 139, 245, 1957, 2195, 2204
NcoI CCATGG 2 cut(s) 1914, 1983
NdeI CATATG 2 cut(s) 1192, 1504
NheI GCTAGC 1 cut(s) 1253
NlaIV GGNNCC 9 cut(s) 147, 240, 409, 681, 1300, 1652, 1969, 2179, 2247
NmuCI GTSAC 4 cut(s) 277, 347, 1705, 2017
NsbI TGCGCA 1 cut(s) 2094
OliI CACNNNNGTG 1 cut(s) 354
PaeR7I CTCGAG 1 cut(s) 2062
PaqCI CACCTGC 1 cut(s) 265
PceI AGGCCT 1 cut(s) 225
PciSI GCTCTTC 1 cut(s) 2063
PctI GAATGC 1 cut(s) 2191
PdmI GAANNNNTTC 3 cut(s) 1438, 2057, 2128
PfeI GAWTC 8 cut(s) 254, 650, 995, 1466, 1565, 1907, 2099, 2264
PflMI CCANNNNNTGG 1 cut(s) 1453
PkrI GCNGC 7 cut(s) 247, 562, 1204, 1462, 1588, 2089, 2092
PleI GAGTC 9 cut(s) 185, 1165, 1526, 1535, 1702, 1755, 2165, 2298, 2303
PpsI GAGTC 9 cut(s) 185, 1165, 1526, 1535, 1702, 1755, 2165, 2298, 2303
Psp6I CCWGG 4 cut(s) 306, 383, 1581, 2230
PspEI GGTNACC 1 cut(s) 302
PspFI CCCAGC 2 cut(s) 270, 492
PspGI CCWGG 4 cut(s) 306, 383, 1581, 2230
PspN4I GGNNCC 9 cut(s) 147, 240, 409, 681, 1300, 1652, 1969, 2179, 2247
PsrI GAACNNNNNNTAC 2 cut(s) 1381, 1413
PstI CTGCAG 1 cut(s) 250
PstNI CAGNNNCTG 1 cut(s) 133
PsuI RGATCY 9 cut(s) 29, 145, 183, 263, 610, 679, 1102, 1967, 2245
PvuII CAGCTG 5 cut(s) 245, 496, 668, 1463, 1589
RsaI GTAC 2 cut(s) 2014, 2179
RsaNI GTAC 2 cut(s) 2013, 2178
RseI CAYNNNNRTG 4 cut(s) 354, 716, 1195, 1644
SalI GTCGAC 1 cut(s) 984
SapI GCTCTTC 1 cut(s) 2063
SaqAI TTAA 2 cut(s) 939, 1760
SatI GCNGC 7 cut(s) 246, 561, 1203, 1461, 1587, 2088, 2091
SchI GAGTC 9 cut(s) 185, 1166, 1526, 1535, 1702, 1756, 2166, 2299, 2304
ScrFI CCNGG 4 cut(s) 308, 385, 1583, 2232
SduI GDGCHC 2 cut(s) 1248, 1525
SfaNI GCATC 4 cut(s) 1352, 1447, 1804, 2137
SfcI CTRYAG 2 cut(s) 246, 963
Sfr274I CTCGAG 1 cut(s) 2062
SlaI CTCGAG 1 cut(s) 2062
SmiMI CAYNNNNRTG 4 cut(s) 354, 716, 1195, 1644
SmlI CTYRAG 2 cut(s) 1744, 2062
SmoI CTYRAG 2 cut(s) 1744, 2062
SseBI AGGCCT 1 cut(s) 225
SsiI CCGC 8 cut(s) 91, 140, 154, 210, 779, 1738, 2189, 2310
SspI AATATT 1 cut(s) 1235
SspMI CTAG 8 cut(s) 201, 390, 420, 1178, 1254, 1875, 2117, 2313
StuI AGGCCT 1 cut(s) 225
StyD4I CCNGG 4 cut(s) 306, 383, 1581, 2230
StyI CCWWGG 4 cut(s) 25, 296, 1914, 1983
TaiI ACGT 1 cut(s) 105
TaqI TCGA 4 cut(s) 985, 1995, 2063, 2293
TatI WGTACW 1 cut(s) 2012
TfiI GAWTC 8 cut(s) 254, 650, 995, 1466, 1565, 1907, 2099, 2264
Tru1I TTAA 2 cut(s) 939, 1760
Tru9I TTAA 2 cut(s) 939, 1760
TscAI CASTG 6 cut(s) 350, 704, 752, 1525, 1801, 2022
TseFI GTSAC 4 cut(s) 277, 347, 1705, 2017
TseI GCWGC 7 cut(s) 245, 560, 1202, 1460, 1586, 2087, 2090
Tsp45I GTSAC 4 cut(s) 277, 347, 1705, 2017
TspGWI ACGGA 2 cut(s) 1356, 1605
TspRI CASTG 6 cut(s) 350, 704, 752, 1525, 1801, 2022
Van91I CCANNNNNTGG 1 cut(s) 1453
XapI RAATTY 4 cut(s) 159, 520, 635, 1686
XbaI TCTAGA 1 cut(s) 389
XcmI CCANNNNNNNNNTGG 3 cut(s) 500, 736, 1589
XhoI CTCGAG 1 cut(s) 2062
XmiI GTMKAC 2 cut(s) 44, 985
XmnI GAANNNNTTC 3 cut(s) 1438, 2057, 2128
XspI CTAG 8 cut(s) 201, 390, 420, 1178, 1254, 1875, 2117, 2313
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.