Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr09

Orthogroup ID

OG0011289

Physical Location & Seq

Genomic Coordinates Forward (+)

8732831 .. 8737985

Gene Structure 5155 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD09G1114700.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1920 bp

ATGGTGTACAAACCATGGAAGATCATCCCCCGGCCATTGCTAGAAACCGTGCTCAACAACCACGCCCAGCGCCACCGCGTGCCTCAGCCTCTGATCCTCCACGGCCCCAGAGGCGCCGGCAAAACCACCCTCATCCTCGAACGTCTGCTGGGGGAGTGGAACAAAGGCCCTCACCTCACCGGCTATGTCGACTTCGCCGAGTCCATCAAGGACCACCACCCGCAGTTCAATCAGTCGTTTCCATGGGCTTCCTGGTCCAATTGCCCGCCGACCACTTTACCCAATTGCCGAACCAAGCTCGAAAGCTGCCTCGAATCCATGGCTCACAAGGGCGTCCAGCTGGGTTCCATCAGCTCCCATCAAATCTTCTCCACTCTCAGCAAATGGCACGGTCTTAACACGGCTCTCCGCCACGTTATTGCCGGCAATGGGGCTGCTAAGAACACTGTTTCTGAGAAAGCTTCCGGGTCGGTTTTGTGGGATCGGGCGGTGTTCGCGCTAAGTGCTCGATGTGATGCCCAAGAGATTGATGGGATTTTGGGTTTGACTGAGAAGAAGAAGAATGTGCCGTTGGAAGAGGCTTCGTATTATAGGGAGGCCGTTGTGGCATTGAGATTGGCAAAGGAGGTGATTAAGCAGCAGCAAAGTTGGAGGGCTAATGCCATTGCTCATTTGAATCGGACTGGTGGATTTTCAAGGTCTTTAGCGAATTCATGTACTGATTGGCCTTGTTTATTGATGGAGTTGTTGTCACAAGGAGCTGAAATTGATCATTTTCAGCCTAAGCTGGTTATTAACAATGTCGAAGTTTTAAAGAATGCGATTCTGTTGGATGAGAATTCATCAGTCTGCGGATCCATGTATCACGACAGTCTAATATGGAGACTAATTGCTTTAGGTGCAAATGAGAGGTGCTTTCCTGTTGTACTCGTGACATCGGATAGTTACTATTCATACCTAGCTTACATGGATTTTGGATTTCCAGACATATTCATCTCTCGTGAGCATGAAGCATGGGAACATTTGTTCCGTGACTTGTATCGTGCTCAATTCTATATTTTGGGACGTGGTTCACTAGATTTGAGATTTTCTTTTTTAATTTGTTTTTGCTACATGTTGTGCCTGGCTTTTGGCTGGAGTCCCCAGGAAGCTAAGTTACATATGGTTACTGAATATTTCAGTAATTCAGAGTGGTCGGTGATTGCTGAGGTGTTTGGCCCAAACCCACGACACCTATTTGAGCTCTATGCACTCAAACAGGCCAATTACTATCAACTGTTAGAAGACAACAAAGATAGCACATTTGAAGACATTGTGGATTCATATTTAGCTTACTTGCAAATTACTGTAGTGAATCCGGCCATGGAGAAAGCATTGGGGCTCCTTCAAAAGTTTGCTGCTGATGCACGAAGTGGAAAATTTTCAAAAGATAGACTACGCTTTGGTGCACCGTGGAGACATCCTCCACCTAAAAATTATCCCACCATGTGCCTTGGATGGGCAAAGATTCAGCTGATGGATTTTGTGCAGTCTCTAATTAATACAGAATTTGGAATTAATTATCTAGCTGATTGTAGCCTTGAGATCATGGACGATCCTTCTGCTGTTGCATTGGTGGAGGTTGGTTTGTTGTATGCTCAACGGGATCCATCAATCATTCGCCCCATATCTAGAGGCATTCAGCGGTGTATTGTAAGATGGCTTGTCCAAGAAAGGATGCAGATGAGTTACCCGAAATTTGTACAGTATAAATGGCAGCGTTTTATGCGTGGCCGTAGCTATCGTCATTTGATGCTACAAAGCGCAAACACTGGTAAAATCATCATTAGCCGATTAAGAGGATATTCGGTGTTTAGATACGCCACGGAGCAACCGTGTCAAAGATTTGATTTTTTGAAGACTACCAGCAGAAATTTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

640

Amino Acids

73.24

Weight (kDa)

8.86

Isoelectric Point (pI)

39.16

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0011289)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G31340
fragaria_vesca	FvH4_6g42100
malus_domestica	MD09G1114700.v1.1 MD17G1106200.v1.1
prunus_persica	Prupe.3G210000_v2.0.a1 Prupe.3G210000_v2.0.a1 Prupe.3G210000_v2.0.a1 Prupe.3G210000_v2.0.a1 Prupe.3G210000_v2.0.a1
pyrus_communis	pycom09g03900
rosa_chinensis	RchiOBHm_Chr2g0158021
rosa_laevigata	RLG00000021050
rosa_multiflora	Rmu_sc0000419.1_g000015
rosa_roxburghii	Rroxscaffold_2G00091740
rosa_rugosa	Rorug02G0465200
rosa_samantha	Rh2AG531200 Rh2BG545700 Rh2CG515500 Rh2DG553800
rosa_wichuraiana	Rw2G043930

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	113
AccI	GTMKAC	1 cut(s)	189
AccII	CGCG	2 cut(s)	78, 497
AciI	CCGC	7 cut(s)	76, 221, 266, 409, 488, 852, 1684
AclWI	GGATC	7 cut(s)	88, 489, 849, 862, 1589, 1640, 1653
AcoI	YGGCCR	3 cut(s)	32, 1359, 1771
AcsI	RAATTY	6 cut(s)	709, 838, 1418, 1547, 1736, 1912
AcyI	GRCGYC	2 cut(s)	114, 333
AdeI	CACNNNGTG	3 cut(s)	79, 1412, 1488
AfaI	GTAC	4 cut(s)	8, 718, 927, 1743
AfiI	CCNNNNNNNGG	2 cut(s)	429, 1498
AflIII	ACRYGT	1 cut(s)	1113
AgsI	TTSAA	7 cut(s)	229, 676, 696, 1307, 1388, 1425, 1897
AjiI	CACGTC	1 cut(s)	1067
AjnI	CCWGG	3 cut(s)	251, 1122, 1143
AjuI	GAANNNNNNNTTGG	2 cut(s)	554, 586
AloI	GAACNNNNNNTCC	4 cut(s)	1010, 1011, 1042, 1043
Alw21I	GWGCWC	5 cut(s)	54, 508, 1048, 1245, 1450
Alw26I	GTCTC	3 cut(s)	877, 1450, 1536
Alw44I	GTGCAC	1 cut(s)	1446
AlwI	GGATC	7 cut(s)	88, 489, 849, 862, 1589, 1640, 1653
AlwNI	CAGNNNCTG	1 cut(s)	91
AoxI	GGCC	9 cut(s)	32, 103, 166, 597, 725, 1216, 1260, 1359, 1771
ApaLI	GTGCAC	1 cut(s)	1446
ApeKI	GCWGC	6 cut(s)	306, 434, 637, 640, 1397, 1756
ApoI	RAATTY	6 cut(s)	709, 838, 1418, 1547, 1736, 1912
AseI	ATTAAT	2 cut(s)	1539, 1557
Asp700I	GAANNNNTTC	1 cut(s)	1420
AspLEI	GCGC	4 cut(s)	72, 116, 499, 1805
AspS9I	GGNCC	5 cut(s)	104, 167, 211, 255, 1217
AsuC2I	CCSGG	2 cut(s)	31, 466
AsuHPI	GGTGA	4 cut(s)	164, 169, 640, 1210
AvaII	GGWCC	2 cut(s)	211, 255
BaeGI	GKGCMC	1 cut(s)	1450
BamHI	GGATCC	2 cut(s)	854, 1645
BanI	GGYRCC	1 cut(s)	113
BanII	GRGCYC	2 cut(s)	1245, 1383
BarI	GAAGNNNNNNTAC	2 cut(s)	1140, 1172
BauI	CACGAG	2 cut(s)	929, 999
BbsI	GAAGAC	3 cut(s)	1290, 1314, 1904
Bbv12I	GWGCWC	5 cut(s)	54, 508, 1048, 1245, 1450
BbvCI	CCTCAGC	2 cut(s)	84, 1206
BbvI	GCAGC	6 cut(s)	293, 421, 649, 652, 1384, 1768
BccI	CCATC	9 cut(s)	212, 356, 366, 524, 733, 1491, 1510, 1657, 1692
BceAI	ACGGC	5 cut(s)	118, 417, 553, 584, 1758
BcgI	CGANNNNNNTGC	2 cut(s)	1583, 1617
BciT130I	CCWGG	3 cut(s)	253, 1124, 1145
BclI	TGATCA	1 cut(s)	769
BcnI	CCSGG	2 cut(s)	31, 466
BcoDI	GTCTC	3 cut(s)	877, 1450, 1536
BfaI	CTAG	5 cut(s)	41, 959, 1076, 1565, 1671
BfmI	CTRYAG	1 cut(s)	1347
BfoI	RGCGCY	2 cut(s)	73, 117
BglI	GCCNNNNNGGC	2 cut(s)	111, 605
BisI	GCNGC	6 cut(s)	307, 435, 638, 641, 1398, 1757
BlsI	GCNGC	6 cut(s)	308, 436, 639, 642, 1399, 1758
Bme1390I	CCNGG	5 cut(s)	31, 253, 466, 1124, 1145
Bme18I	GGWCC	2 cut(s)	211, 255
BmgBI	CACGTC	1 cut(s)	1067
BmgT120I	GGNCC	5 cut(s)	104, 167, 211, 255, 1217
BmiI	GGNNCC	6 cut(s)	106, 115, 346, 856, 1382, 1647
BmrFI	CCNGG	5 cut(s)	31, 253, 466, 1124, 1145
BmsI	GCATC	4 cut(s)	505, 1393, 1707, 1782
BpiI	GAAGAC	3 cut(s)	1290, 1314, 1904
BplI	GAGNNNNNCTC	2 cut(s)	1447, 1479
BpmI	CTGGAG	1 cut(s)	1156
Bpu10I	CCTNAGC	3 cut(s)	84, 783, 1206
BpuEI	CTTGAG	1 cut(s)	1601
BpuMI	CCSGG	2 cut(s)	31, 466
BsaHI	GRCGYC	2 cut(s)	114, 333
BsaXI	ACNNNNNCTCC	4 cut(s)	734, 764, 1859, 1889
Bsc4I	CCNNNNNNNGG	2 cut(s)	429, 1498
Bse118I	RCCGGY	3 cut(s)	116, 179, 422
Bse1I	ACTGG	2 cut(s)	688, 1816
Bse3DI	GCAATG	3 cut(s)	35, 433, 663
BseBI	CCWGG	3 cut(s)	253, 1124, 1145
BseGI	GGATG	6 cut(s)	24, 132, 838, 1459, 1502, 1722
BseLI	CCNNNNNNNGG	2 cut(s)	429, 1498
BseMI	GCAATG	3 cut(s)	35, 433, 663
BseMII	CTCAG	5 cut(s)	98, 391, 444, 540, 1197
BseNI	ACTGG	2 cut(s)	688, 1816
BseSI	GKGCMC	1 cut(s)	1450
BseXI	GCAGC	6 cut(s)	293, 421, 649, 652, 1384, 1768
BseYI	CCCAGC	3 cut(s)	66, 148, 340
BsgI	GTGCAG	1 cut(s)	1547
Bsh1236I	CGCG	2 cut(s)	78, 497
BshFI	GGCC	9 cut(s)	34, 105, 168, 599, 727, 1218, 1262, 1361, 1773
BshNI	GGYRCC	1 cut(s)	113
BsiHKAI	GWGCWC	5 cut(s)	54, 508, 1048, 1245, 1450
BsiSI	CCGG	6 cut(s)	31, 117, 180, 423, 465, 1358
BslFI	GGGAC	2 cut(s)	1077, 1125
BslI	CCNNNNNNNGG	2 cut(s)	429, 1498
BsmAI	GTCTC	3 cut(s)	877, 1450, 1536
BsmFI	GGGAC	2 cut(s)	1077, 1125
BsmI	GAATGC	2 cut(s)	823, 1677
BsnI	GGCC	9 cut(s)	34, 105, 168, 599, 727, 1218, 1262, 1361, 1773
Bsp1286I	GDGCHC	6 cut(s)	54, 508, 1048, 1245, 1383, 1450
Bsp1407I	TGTACA	2 cut(s)	6, 1741
Bsp143I	GATC	8 cut(s)	21, 93, 481, 769, 854, 1584, 1594, 1645
Bsp19I	CCATGG	4 cut(s)	14, 242, 318, 1362
BspACI	CCGC	7 cut(s)	76, 221, 266, 409, 488, 852, 1684
BspANI	GGCC	9 cut(s)	34, 105, 168, 599, 727, 1218, 1262, 1361, 1773
BspCNI	CTCAG	5 cut(s)	97, 390, 445, 541, 1198
BspFNI	CGCG	2 cut(s)	78, 497
BspLI	GGNNCC	6 cut(s)	106, 115, 346, 856, 1382, 1647
BspPI	GGATC	7 cut(s)	88, 489, 849, 862, 1589, 1640, 1653
BspT107I	GGYRCC	1 cut(s)	113
BsrDI	GCAATG	3 cut(s)	35, 433, 663
BsrFI	RCCGGY	3 cut(s)	116, 179, 422
BsrGI	TGTACA	2 cut(s)	6, 1741
BsrI	ACTGG	2 cut(s)	688, 1816
BssAI	RCCGGY	3 cut(s)	116, 179, 422
BssMI	GATC	8 cut(s)	21, 93, 481, 769, 854, 1584, 1594, 1645
BssNI	GRCGYC	2 cut(s)	114, 333
BssSI	CACGAG	2 cut(s)	929, 999
BssT1I	CCWWGG	5 cut(s)	14, 242, 318, 1362, 1492
Bst2BI	CACGAG	2 cut(s)	929, 999
Bst2UI	CCWGG	3 cut(s)	253, 1124, 1145
Bst4CI	ACNGT	9 cut(s)	49, 392, 448, 872, 1278, 1348, 1452, 1746, 1875
Bst6I	CTCTTC	1 cut(s)	570
BstACI	GRCGYC	2 cut(s)	114, 333
BstAUI	TGTACA	2 cut(s)	6, 1741
BstC8I	GCNNGC	4 cut(s)	80, 118, 266, 424
BstDEI	CTNAG	9 cut(s)	84, 377, 438, 453, 500, 549, 783, 1152, 1206
BstDSI	CCRYGG	7 cut(s)	14, 100, 242, 318, 1362, 1451, 1863
BstF5I	GGATG	6 cut(s)	24, 132, 838, 1459, 1502, 1722
BstFNI	CGCG	2 cut(s)	78, 497
BstH2I	RGCGCY	2 cut(s)	73, 117
BstHHI	GCGC	4 cut(s)	72, 116, 499, 1805
BstKTI	GATC	8 cut(s)	24, 96, 484, 772, 857, 1587, 1597, 1648
BstMAI	GTCTC	3 cut(s)	877, 1450, 1536
BstMBI	GATC	8 cut(s)	21, 93, 481, 769, 854, 1584, 1594, 1645
BstMWI	GCNNNNNNNGC	7 cut(s)	111, 494, 503, 605, 899, 1403, 1765
BstNI	CCWGG	3 cut(s)	253, 1124, 1145
BstNSI	RCATGY	1 cut(s)	1117
BstSCI	CCNGG	5 cut(s)	29, 251, 464, 1122, 1143
BstSFI	CTRYAG	1 cut(s)	1347
BstSLI	GKGCMC	1 cut(s)	1450
BstUI	CGCG	2 cut(s)	78, 497
BstV1I	GCAGC	6 cut(s)	293, 421, 649, 652, 1384, 1768
BstV2I	GAAGAC	3 cut(s)	1290, 1314, 1904
BstX2I	RGATCY	2 cut(s)	854, 1645
BstYI	RGATCY	2 cut(s)	854, 1645
BsuRI	GGCC	9 cut(s)	34, 105, 168, 599, 727, 1218, 1262, 1361, 1773
BtgI	CCRYGG	7 cut(s)	14, 100, 242, 318, 1362, 1451, 1863
BtrI	CACGTC	1 cut(s)	1067
BtsCI	GGATG	6 cut(s)	24, 132, 838, 1459, 1502, 1722
BtsIMutI	CAGTG	2 cut(s)	444, 1809
Cac8I	GCNNGC	4 cut(s)	80, 118, 266, 424
CaiI	CAGNNNCTG	1 cut(s)	91
CfoI	GCGC	4 cut(s)	72, 116, 499, 1805
Cfr10I	RCCGGY	3 cut(s)	116, 179, 422
Cfr13I	GGNCC	5 cut(s)	104, 167, 211, 255, 1217
CseI	GACGC	1 cut(s)	322
Csp6I	GTAC	4 cut(s)	7, 717, 926, 1742
CviQI	GTAC	4 cut(s)	7, 717, 926, 1742
DdeI	CTNAG	9 cut(s)	84, 377, 438, 453, 500, 549, 783, 1152, 1206
DinI	GGCGCC	1 cut(s)	115
DpnI	GATC	8 cut(s)	23, 95, 483, 771, 856, 1586, 1596, 1647
DpnII	GATC	8 cut(s)	21, 93, 481, 769, 854, 1584, 1594, 1645
DraI	TTTAAA	1 cut(s)	813
DraIII	CACNNNGTG	3 cut(s)	79, 1412, 1488
EaeI	YGGCCR	3 cut(s)	32, 1359, 1771
Eam1104I	CTCTTC	1 cut(s)	570
EarI	CTCTTC	1 cut(s)	570
EciI	GGCGGA	1 cut(s)	398
Ecl136II	GAGCTC	1 cut(s)	1243
Eco130I	CCWWGG	5 cut(s)	14, 242, 318, 1362, 1492
Eco24I	GRGCYC	2 cut(s)	1245, 1383
Eco47I	GGWCC	2 cut(s)	211, 255
Eco53kI	GAGCTC	1 cut(s)	1243
EcoICRI	GAGCTC	1 cut(s)	1243
EcoO109I	RGGNCCY	1 cut(s)	167
EcoRI	GAATTC	2 cut(s)	709, 838
EcoRII	CCWGG	3 cut(s)	251, 1122, 1143
EcoT14I	CCWWGG	5 cut(s)	14, 242, 318, 1362, 1492
EcoT38I	GRGCYC	2 cut(s)	1245, 1383
EgeI	GGCGCC	1 cut(s)	115
EheI	GGCGCC	1 cut(s)	115
ErhI	CCWWGG	5 cut(s)	14, 242, 318, 1362, 1492
FaqI	GGGAC	2 cut(s)	1077, 1125
FauI	CCCGC	2 cut(s)	228, 273
FauNDI	CATATG	1 cut(s)	1161
FbaI	TGATCA	1 cut(s)	769
FblI	GTMKAC	1 cut(s)	189
Fnu4HI	GCNGC	6 cut(s)	307, 435, 638, 641, 1398, 1757
FokI	GGATG	6 cut(s)	11, 119, 845, 1446, 1509, 1729
FriOI	GRGCYC	2 cut(s)	1245, 1383
Fsp4HI	GCNGC	6 cut(s)	307, 435, 638, 641, 1398, 1757
FspBI	CTAG	5 cut(s)	41, 959, 1076, 1565, 1671
GlaI	GCGC	4 cut(s)	71, 115, 498, 1804
GluI	GCNGC	6 cut(s)	307, 435, 638, 641, 1398, 1757
GsaI	CCCAGC	3 cut(s)	70, 152, 344
GsuI	CTGGAG	1 cut(s)	1156
HaeII	RGCGCY	2 cut(s)	73, 117
HaeIII	GGCC	9 cut(s)	34, 105, 168, 599, 727, 1218, 1262, 1361, 1773
HapII	CCGG	6 cut(s)	31, 117, 180, 423, 465, 1358
HgaI	GACGC	1 cut(s)	322
HhaI	GCGC	4 cut(s)	72, 116, 499, 1805
Hin1I	GRCGYC	2 cut(s)	114, 333
Hin6I	GCGC	4 cut(s)	70, 114, 497, 1803
HinP1I	GCGC	4 cut(s)	70, 114, 497, 1803
HincII	GTYRAC	1 cut(s)	190
HindII	GTYRAC	1 cut(s)	190
HindIII	AAGCTT	1 cut(s)	459
HinfI	GANTC	8 cut(s)	200, 314, 676, 823, 1138, 1319, 1354, 1507
HpaII	CCGG	6 cut(s)	31, 117, 180, 423, 465, 1358
HphI	GGTGA	4 cut(s)	164, 169, 640, 1210
Hpy166II	GTNNAC	4 cut(s)	7, 190, 1073, 1448
Hpy188I	TCNGA	5 cut(s)	93, 454, 681, 940, 1189
Hpy188III	TCNNGA	5 cut(s)	866, 931, 983, 1001, 1671
Hpy8I	GTNNAC	4 cut(s)	7, 190, 1073, 1448
HpyAV	CCTTC	2 cut(s)	1394, 1608
HpyCH4III	ACNGT	9 cut(s)	49, 392, 448, 872, 1278, 1348, 1452, 1746, 1875
HpyCH4IV	ACGT	3 cut(s)	142, 414, 1066
HpyCH4V	TGCA	8 cut(s)	902, 1250, 1339, 1406, 1448, 1528, 1610, 1720
HpyF10VI	GCNNNNNNNGC	7 cut(s)	111, 494, 503, 605, 899, 1403, 1765
HpyF3I	CTNAG	9 cut(s)	84, 377, 438, 453, 500, 549, 783, 1152, 1206
HpySE526I	ACGT	3 cut(s)	142, 414, 1066
Hsp92I	GRCGYC	2 cut(s)	114, 333
HspAI	GCGC	4 cut(s)	70, 114, 497, 1803
KasI	GGCGCC	1 cut(s)	113
KroI	GCCGGC	2 cut(s)	116, 422
KroNI	GCCGGC	2 cut(s)	118, 424
Ksp22I	TGATCA	1 cut(s)	769
Kzo9I	GATC	8 cut(s)	21, 93, 481, 769, 854, 1584, 1594, 1645
LmnI	GCTCC	4 cut(s)	359, 758, 1386, 1867
Lsp1109I	GCAGC	6 cut(s)	293, 421, 649, 652, 1384, 1768
LweI	GCATC	4 cut(s)	505, 1393, 1707, 1782
MaeI	CTAG	5 cut(s)	41, 959, 1076, 1565, 1671
MaeII	ACGT	3 cut(s)	142, 414, 1066
MaeIII	GTNAC	7 cut(s)	750, 931, 944, 1031, 1155, 1165, 1727
MalI	GATC	8 cut(s)	23, 95, 483, 771, 856, 1586, 1596, 1647
MboI	GATC	8 cut(s)	21, 93, 481, 769, 854, 1584, 1594, 1645
MboII	GAAGA	9 cut(s)	31, 358, 565, 568, 571, 587, 1295, 1319, 1909
MfeI	CAATTG	2 cut(s)	259, 283
MflI	RGATCY	2 cut(s)	854, 1645
MhlI	GDGCHC	6 cut(s)	54, 508, 1048, 1245, 1383, 1450
Mly113I	GGCGCC	1 cut(s)	114
MlyI	GAGTC	2 cut(s)	209, 1147
MmeI	TCCRAC	3 cut(s)	552, 629, 810
MroNI	GCCGGC	2 cut(s)	116, 422
MroXI	GAANNNNTTC	1 cut(s)	1420
MseI	TTAA	8 cut(s)	396, 633, 795, 812, 1097, 1539, 1557, 1835
MspA1I	CMGCKG	3 cut(s)	340, 1513, 1684
MspI	CCGG	6 cut(s)	31, 117, 180, 423, 465, 1358
MspR9I	CCNGG	5 cut(s)	31, 253, 466, 1124, 1145
MunI	CAATTG	2 cut(s)	259, 283
Mva1269I	GAATGC	2 cut(s)	823, 1677
MvaI	CCWGG	3 cut(s)	253, 1124, 1145
MvnI	CGCG	2 cut(s)	78, 497
MwoI	GCNNNNNNNGC	7 cut(s)	111, 494, 503, 605, 899, 1403, 1765
NaeI	GCCGGC	2 cut(s)	118, 424
NarI	GGCGCC	1 cut(s)	114
NciI	CCSGG	2 cut(s)	31, 466
NcoI	CCATGG	4 cut(s)	14, 242, 318, 1362
NdeI	CATATG	1 cut(s)	1161
NdeII	GATC	8 cut(s)	21, 93, 481, 769, 854, 1584, 1594, 1645
NgoMIV	GCCGGC	2 cut(s)	116, 422
NlaIV	GGNNCC	6 cut(s)	106, 115, 346, 856, 1382, 1647
NmeAIII	GCCGAG	1 cut(s)	223
NmuCI	GTSAC	3 cut(s)	750, 931, 1031
NspI	RCATGY	1 cut(s)	1117
PciI	ACATGT	1 cut(s)	1113
PcsI	WCGNNNNNNNCGW	2 cut(s)	195, 1871
PctI	GAATGC	2 cut(s)	823, 1677
PdiI	GCCGGC	2 cut(s)	118, 424
PdmI	GAANNNNTTC	1 cut(s)	1420
PfeI	GAWTC	6 cut(s)	314, 676, 823, 1319, 1354, 1507
PkrI	GCNGC	6 cut(s)	308, 436, 639, 642, 1399, 1758
PleI	GAGTC	2 cut(s)	208, 1146
PluTI	GGCGCC	1 cut(s)	117
PpsI	GAGTC	2 cut(s)	208, 1146
PscI	ACATGT	1 cut(s)	1113
PshBI	ATTAAT	2 cut(s)	1539, 1557
Psp124BI	GAGCTC	1 cut(s)	1245
Psp6I	CCWGG	3 cut(s)	251, 1122, 1143
PspFI	CCCAGC	3 cut(s)	66, 148, 340
PspGI	CCWGG	3 cut(s)	251, 1122, 1143
PspN4I	GGNNCC	6 cut(s)	106, 115, 346, 856, 1382, 1647
PspPI	GGNCC	5 cut(s)	104, 167, 211, 255, 1217
PstNI	CAGNNNCTG	1 cut(s)	91
PsuI	RGATCY	2 cut(s)	854, 1645
PvuII	CAGCTG	2 cut(s)	340, 1513
RsaI	GTAC	4 cut(s)	8, 718, 927, 1743
RsaNI	GTAC	4 cut(s)	7, 717, 926, 1742
SacI	GAGCTC	1 cut(s)	1245
SalI	GTCGAC	1 cut(s)	188
SaqAI	TTAA	8 cut(s)	396, 633, 795, 812, 1097, 1539, 1557, 1835
SatI	GCNGC	6 cut(s)	307, 435, 638, 641, 1398, 1757
Sau3AI	GATC	8 cut(s)	21, 93, 481, 769, 854, 1584, 1594, 1645
Sau96I	GGNCC	5 cut(s)	104, 167, 211, 255, 1217
SchI	GAGTC	2 cut(s)	209, 1147
ScrFI	CCNGG	5 cut(s)	31, 253, 466, 1124, 1145
SduI	GDGCHC	6 cut(s)	54, 508, 1048, 1245, 1383, 1450
SfaNI	GCATC	4 cut(s)	505, 1393, 1707, 1782
SfcI	CTRYAG	1 cut(s)	1347
SfoI	GGCGCC	1 cut(s)	115
SinI	GGWCC	2 cut(s)	211, 255
SmlI	CTYRAG	1 cut(s)	1580
SmoI	CTYRAG	1 cut(s)	1580
SsiI	CCGC	7 cut(s)	76, 221, 266, 409, 488, 852, 1684
SspDI	GGCGCC	1 cut(s)	113
SspI	AATATT	1 cut(s)	1175
SspMI	CTAG	5 cut(s)	41, 959, 1076, 1565, 1671
SstI	GAGCTC	1 cut(s)	1245
StyD4I	CCNGG	5 cut(s)	29, 251, 464, 1122, 1143
StyI	CCWWGG	5 cut(s)	14, 242, 318, 1362, 1492
TaaI	ACNGT	9 cut(s)	49, 392, 448, 872, 1278, 1348, 1452, 1746, 1875
TaiI	ACGT	3 cut(s)	145, 417, 1069
TaqI	TCGA	6 cut(s)	138, 189, 300, 312, 508, 804
TatI	WGTACW	4 cut(s)	6, 716, 925, 1741
TfiI	GAWTC	6 cut(s)	314, 676, 823, 1319, 1354, 1507
Tru1I	TTAA	8 cut(s)	396, 633, 795, 812, 1097, 1539, 1557, 1835
Tru9I	TTAA	8 cut(s)	396, 633, 795, 812, 1097, 1539, 1557, 1835
TscAI	CASTG	2 cut(s)	451, 1816
TseFI	GTSAC	3 cut(s)	750, 931, 1031
TseI	GCWGC	6 cut(s)	306, 434, 637, 640, 1397, 1756
Tsp45I	GTSAC	3 cut(s)	750, 931, 1031
TspDTI	ATGAA	6 cut(s)	702, 831, 942, 982, 1023, 1311
TspGWI	ACGGA	2 cut(s)	1019, 1880
TspRI	CASTG	2 cut(s)	451, 1816
VneI	GTGCAC	1 cut(s)	1446
VpaK11BI	GGWCC	2 cut(s)	211, 255
VspI	ATTAAT	2 cut(s)	1539, 1557
XapI	RAATTY	6 cut(s)	709, 838, 1418, 1547, 1736, 1912
XbaI	TCTAGA	1 cut(s)	1670
XceI	RCATGY	1 cut(s)	1117
XcmI	CCANNNNNNNNNTGG	2 cut(s)	249, 527
XmiI	GTMKAC	1 cut(s)	189
XmnI	GAANNNNTTC	1 cut(s)	1420
XspI	CTAG	5 cut(s)	41, 959, 1076, 1565, 1671

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.