Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr2D

Orthogroup ID

OG0011289

Physical Location & Seq

Genomic Coordinates Reverse (-)

78283383 .. 78288807

Gene Structure 5425 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh2DG553800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1791 bp

ATGGTGAACAAACCCTGGAGGATCATCCCCAGGCCATTGTTAGAAACAGTCCTCAACAACCACGCTCACCACCACCGCGTCCCCCAGCCTCTCATCCTCCACGGCCCCCGCGGCGTCGGCAAGACCACCCTCATCCTCGAACGTCTGCTGGGCGAGTGGAACCAAGGCCCCCACCTCACTGGCTACGTCGACTTCGCCGAGTCCATCAAAGACCACCACCCCCAGTTCAATCACTCATTTCCTTGGGCTTCATGGGCCAATTGCCCACCTCCCACTTTGTCCGATTGCACAACCAAACTCGAGACCTGCCTCGAATCCATGGCTCACAGGGGCGTCCAGCTCGGCGCCATTACCTCCCACCACGTCTTCTCTACCCTCTGCAAATGGCACTGTCTCAACAACTCTCTTCGCCGAGTTATTCAGGGCACTAAGGCTTCCAACAATGCGGTTTCCCACAAGGTTTCCGGCTCGGTTCTGTGGGATCGGGCGGTCTTCGCATTGAGTGCTAGGTGTGATGGTGAAGAGATTGATGGGGTTTTAGGGTTGAGTGGTACGAAGAAGAAGAGTTTGTCACTGGAGGAGGCTTCGTATTATAGGGAGGCCGTTGTGGCATTGAAATTGGCAAAGGAGGTGATTCAGTTGCAGCATAGCTGGAGGGCTAATGCCATTGCGCATTTGAATAGGACAGGTGGGTTTTCGAGGTCTCTGGCGAATTCGTGTACTGATTGGCCTTGTTTGTTGTTGGAGTTGTTGTCACAAGCTGCTGAAATTGACCATTTTCAGCCTAAGCTGGTAATAAACAATATCGAAGTTCTGAAGAATGCAATTCTGTTAGATGAGAGTTCATCAGTCAGTGGATCGATGTACCATGACAGCCTAATATGGAGAATAATTGCTTTAGGTGCAAATGAGAGGTGCTTGCCTCTTGTACTTGTGACATCGGATAGTTACTATTCGTACCGAGCTTACATGGATTTTGGATTTCCAGACATATTCATCTCTCGTGAGATCTTTGGCTGGAATCCCCAAGAAGCCAAACTGCATATGGTTACTGATTACTTCAGTCATTCAGAGTGGTTGATAATTGCCGAGGTGCTTGGCCCAAACCCACGGCACCTTTTCGAGCTATATGCACTCAAGCAGGGCAATTACTATCAGAAGTTGGTGGATAACAAAGATGGCACATTTGAGGACATTGTGGATTCATATTTAGCATATTTGCAAATTACTGTAGTCAATCCTGCCATGGAGAGAGCATTGGGGTTTCTGCAAAAGTTTGCTGTTGATGCACACAGGGGAAAGATATCAAAAGATAGACTGCGCTTTGGTGCACCTTGGAGACATCCTCCACCAACTGATGAACCCACATTGTGCACTGATTGGGCAAAGGTCCAGCTGATGGATTTTGTGCAGTCTTTCGTCAATACAGAATTTGGAGTTAATTATCTAGCTGATTGTAGCCTGGAGATCTTCGATGATCCATCTGCTGTTGCATTAGTGGAGGTTGGCTTGCTCTATGCTCAACGGGATCCATCCATCATTCGCCCCATATCTAGAGCTATTCAACGGTGTCTTGTAAGATGGCTTGTCCAAGAGAGATTAAAGATGGGTTTCCGGGAATCACTCCACATGAGAGAGGGGTTGACAAATTCATCTTTCATTCGGGGAGTGAGGCCCTTGCTTCAGGTTCATATAAATAGCTTTAACAGCATGCAAAGATGGGTAAAGTCTTCAGAAGCTGATTTCGACGAATTTTGTCCAGATATGGCTATGGAGCAACCCTTTTGTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

596

Amino Acids

67.68

Weight (kDa)

6.58

Isoelectric Point (pI)

38.19

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0011289)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G31340
fragaria_vesca	FvH4_6g42100
malus_domestica	MD09G1114700.v1.1 MD17G1106200.v1.1
prunus_persica	Prupe.3G210000_v2.0.a1 Prupe.3G210000_v2.0.a1 Prupe.3G210000_v2.0.a1 Prupe.3G210000_v2.0.a1 Prupe.3G210000_v2.0.a1
pyrus_communis	pycom09g03900
rosa_chinensis	RchiOBHm_Chr2g0158021
rosa_laevigata	RLG00000021050
rosa_multiflora	Rmu_sc0000419.1_g000015
rosa_roxburghii	Rroxscaffold_2G00091740
rosa_rugosa	Rorug02G0465200
rosa_samantha	Rh2AG531200 Rh2BG545700 Rh2CG515500 Rh2DG553800
rosa_wichuraiana	Rw2G043930

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	672
Acc36I	ACCTGC	1 cut(s)	314
AccB1I	GGYRCC	2 cut(s)	344, 1113
AccB7I	CCANNNNNTGG	1 cut(s)	1399
AccI	GTMKAC	1 cut(s)	189
AccII	CGCG	2 cut(s)	78, 111
AciI	CCGC	5 cut(s)	76, 109, 111, 446, 488
AclWI	GGATC	6 cut(s)	29, 489, 865, 1472, 1523, 1536
AcsI	RAATTY	4 cut(s)	712, 1430, 1648, 1751
AcuI	CTGAAG	4 cut(s)	836, 1045, 1667, 1716
AcyI	GRCGYC	3 cut(s)	114, 333, 345
AdeI	CACNNNGTG	1 cut(s)	1371
AfaI	GTAC	5 cut(s)	553, 721, 866, 930, 959
AfiI	CCNNNNNNNGG	1 cut(s)	1399
AgsI	TTSAA	4 cut(s)	229, 616, 679, 1565
AjiI	CACGTC	1 cut(s)	364
AjnI	CCWGG	3 cut(s)	14, 29, 1461
Alw21I	GWGCWC	2 cut(s)	1333, 1376
Alw26I	GTCTC	4 cut(s)	296, 398, 708, 1333
Alw44I	GTGCAC	2 cut(s)	1329, 1372
AlwI	GGATC	6 cut(s)	29, 489, 865, 1472, 1523, 1536
AlwNI	CAGNNNCTG	1 cut(s)	1739
Ama87I	CYCGRG	1 cut(s)	299
AoxI	GGCC	8 cut(s)	32, 103, 166, 255, 600, 728, 1099, 1673
ApaLI	GTGCAC	2 cut(s)	1329, 1372
ApeKI	GCWGC	2 cut(s)	643, 761
ApoI	RAATTY	4 cut(s)	712, 1430, 1648, 1751
AspLEI	GCGC	3 cut(s)	347, 673, 1323
AspS9I	GGNCC	6 cut(s)	104, 167, 255, 1100, 1390, 1674
AsuC2I	CCSGG	1 cut(s)	1616
AsuHPI	GGTGA	4 cut(s)	16, 59, 530, 643
AvaI	CYCGRG	1 cut(s)	299
AvaII	GGWCC	1 cut(s)	1390
BaeGI	GKGCMC	3 cut(s)	428, 1333, 1376
BamHI	GGATCC	1 cut(s)	1528
BanI	GGYRCC	2 cut(s)	344, 1113
BauI	CACGAG	1 cut(s)	1002
BbsI	GAAGAC	3 cut(s)	358, 484, 1722
Bbv12I	GWGCWC	2 cut(s)	1333, 1376
BbvI	GCAGC	2 cut(s)	655, 748
BceAI	ACGGC	3 cut(s)	118, 587, 1127
BcgI	CGANNNNNNTGC	2 cut(s)	1112, 1146
BciT130I	CCWGG	3 cut(s)	16, 31, 1463
BcnI	CCSGG	1 cut(s)	1616
BcoDI	GTCTC	4 cut(s)	296, 398, 708, 1333
BfaI	CTAG	3 cut(s)	507, 1448, 1554
BfmI	CTRYAG	1 cut(s)	1230
BfoI	RGCGCY	1 cut(s)	348
BfuAI	ACCTGC	1 cut(s)	314
BglI	GCCNNNNNGGC	2 cut(s)	111, 608
BglII	AGATCT	2 cut(s)	1008, 1467
BisI	GCNGC	3 cut(s)	112, 644, 762
BlsI	GCNGC	3 cut(s)	113, 645, 763
Bme1390I	CCNGG	4 cut(s)	16, 31, 1463, 1616
Bme18I	GGWCC	1 cut(s)	1390
BmeT110I	CYCGRG	1 cut(s)	299
BmgBI	CACGTC	1 cut(s)	364
BmgT120I	GGNCC	6 cut(s)	104, 167, 255, 1100, 1390, 1674
BmiI	GGNNCC	6 cut(s)	106, 161, 169, 346, 1115, 1530
BmrFI	CCNGG	4 cut(s)	16, 31, 1463, 1616
BmrI	ACTGGG	1 cut(s)	217
BmsI	GCATC	1 cut(s)	1276
BmuI	ACTGGG	1 cut(s)	217
BpiI	GAAGAC	3 cut(s)	358, 484, 1722
BplI	GAGNNNNNCTC	2 cut(s)	1330, 1362
BpmI	CTGGAG	4 cut(s)	37, 596, 673, 1484
Bpu10I	CCTNAGC	1 cut(s)	786
BpuEI	CTTGAG	1 cut(s)	1121
BpuMI	CCSGG	1 cut(s)	1616
Bsa29I	ATCGAT	1 cut(s)	860
BsaHI	GRCGYC	3 cut(s)	114, 333, 345
BsaI	GGTCTC	2 cut(s)	296, 708
BsaXI	ACNNNNNCTCC	4 cut(s)	572, 602, 737, 767
Bsc4I	CCNNNNNNNGG	1 cut(s)	1399
Bse1I	ACTGG	3 cut(s)	184, 223, 579
Bse3DI	GCAATG	1 cut(s)	666
BseBI	CCWGG	3 cut(s)	16, 31, 1463
BseCI	ATCGAT	1 cut(s)	860
BseGI	GGATG	5 cut(s)	24, 93, 132, 1342, 1532
BseLI	CCNNNNNNNGG	1 cut(s)	1399
BseMI	GCAATG	1 cut(s)	666
BseNI	ACTGG	3 cut(s)	184, 223, 579
BseRI	GAGGAG	1 cut(s)	593
BseSI	GKGCMC	3 cut(s)	428, 1333, 1376
BseXI	GCAGC	2 cut(s)	655, 748
BseYI	CCCAGC	2 cut(s)	84, 148
BsgI	GTGCAG	1 cut(s)	1430
Bsh1236I	CGCG	2 cut(s)	78, 111
BshFI	GGCC	8 cut(s)	34, 105, 168, 257, 602, 730, 1101, 1675
BshNI	GGYRCC	2 cut(s)	344, 1113
BshVI	ATCGAT	1 cut(s)	860
BsiHKAI	GWGCWC	2 cut(s)	1333, 1376
BsiHKCI	CYCGRG	1 cut(s)	299
BsiSI	CCGG	2 cut(s)	465, 1615
BslFI	GGGAC	1 cut(s)	65
BslI	CCNNNNNNNGG	1 cut(s)	1399
BsmAI	GTCTC	4 cut(s)	296, 398, 708, 1333
BsmFI	GGGAC	1 cut(s)	65
BsmI	GAATGC	1 cut(s)	826
BsnI	GGCC	8 cut(s)	34, 105, 168, 257, 602, 730, 1101, 1675
Bso31I	GGTCTC	2 cut(s)	296, 708
BsoBI	CYCGRG	1 cut(s)	299
Bsp1286I	GDGCHC	3 cut(s)	428, 1333, 1376
Bsp143I	GATC	7 cut(s)	21, 481, 857, 1008, 1467, 1477, 1528
Bsp19I	CCATGG	2 cut(s)	318, 1245
BspACI	CCGC	5 cut(s)	76, 109, 111, 446, 488
BspANI	GGCC	8 cut(s)	34, 105, 168, 257, 602, 730, 1101, 1675
BspDI	ATCGAT	1 cut(s)	860
BspFNI	CGCG	2 cut(s)	78, 111
BspLI	GGNNCC	6 cut(s)	106, 161, 169, 346, 1115, 1530
BspMI	ACCTGC	1 cut(s)	314
BspPI	GGATC	6 cut(s)	29, 489, 865, 1472, 1523, 1536
BspT107I	GGYRCC	2 cut(s)	344, 1113
BspTNI	GGTCTC	2 cut(s)	296, 708
BsrDI	GCAATG	1 cut(s)	666
BsrI	ACTGG	3 cut(s)	184, 223, 579
BssMI	GATC	7 cut(s)	21, 481, 857, 1008, 1467, 1477, 1528
BssNI	GRCGYC	3 cut(s)	114, 333, 345
BssSI	CACGAG	1 cut(s)	1002
BssT1I	CCWWGG	5 cut(s)	163, 242, 318, 1245, 1334
Bst2BI	CACGAG	1 cut(s)	1002
Bst2UI	CCWGG	3 cut(s)	16, 31, 1463
Bst4CI	ACNGT	4 cut(s)	49, 392, 1231, 1569
Bst6I	CTCTTC	3 cut(s)	411, 516, 557
BstACI	GRCGYC	3 cut(s)	114, 333, 345
BstAPI	GCANNNNNTGC	1 cut(s)	503
BstC8I	GCNNGC	3 cut(s)	920, 1511, 1712
BstDEI	CTNAG	2 cut(s)	429, 786
BstDSI	CCRYGG	5 cut(s)	100, 109, 318, 1109, 1245
BstF5I	GGATG	5 cut(s)	24, 93, 132, 1342, 1532
BstFNI	CGCG	2 cut(s)	78, 111
BstH2I	RGCGCY	1 cut(s)	348
BstHHI	GCGC	3 cut(s)	347, 673, 1323
BstKTI	GATC	7 cut(s)	24, 484, 860, 1011, 1470, 1480, 1531
BstMAI	GTCTC	4 cut(s)	296, 398, 708, 1333
BstMBI	GATC	7 cut(s)	21, 481, 857, 1008, 1467, 1477, 1528
BstMWI	GCNNNNNNNGC	9 cut(s)	111, 117, 254, 494, 503, 608, 902, 1286, 1707
BstNI	CCWGG	3 cut(s)	16, 31, 1463
BstNSI	RCATGY	1 cut(s)	1714
BstSCI	CCNGG	4 cut(s)	14, 29, 1461, 1614
BstSFI	CTRYAG	1 cut(s)	1230
BstSLI	GKGCMC	3 cut(s)	428, 1333, 1376
BstUI	CGCG	2 cut(s)	78, 111
BstV1I	GCAGC	2 cut(s)	655, 748
BstV2I	GAAGAC	3 cut(s)	358, 484, 1722
BstX2I	RGATCY	3 cut(s)	1008, 1467, 1528
BstXI	CCANNNNNNTGG	1 cut(s)	179
BstYI	RGATCY	3 cut(s)	1008, 1467, 1528
Bsu15I	ATCGAT	1 cut(s)	860
BsuRI	GGCC	8 cut(s)	34, 105, 168, 257, 602, 730, 1101, 1675
BsuTUI	ATCGAT	1 cut(s)	860
BtgI	CCRYGG	5 cut(s)	100, 109, 318, 1109, 1245
BtrI	CACGTC	1 cut(s)	364
BtsCI	GGATG	5 cut(s)	24, 93, 132, 1342, 1532
BtsIMutI	CAGTG	5 cut(s)	177, 388, 572, 859, 1374
BveI	ACCTGC	1 cut(s)	314
Cac8I	GCNNGC	3 cut(s)	920, 1511, 1712
CaiI	CAGNNNCTG	1 cut(s)	1739
CfoI	GCGC	3 cut(s)	347, 673, 1323
Cfr13I	GGNCC	6 cut(s)	104, 167, 255, 1100, 1390, 1674
Cfr42I	CCGCGG	1 cut(s)	112
ClaI	ATCGAT	1 cut(s)	860
CseI	GACGC	3 cut(s)	67, 103, 322
Csp6I	GTAC	5 cut(s)	552, 720, 865, 929, 958
CviAII	CATG	7 cut(s)	252, 319, 869, 970, 1246, 1630, 1711
CviQI	GTAC	5 cut(s)	552, 720, 865, 929, 958
DdeI	CTNAG	2 cut(s)	429, 786
DinI	GGCGCC	1 cut(s)	346
DpnI	GATC	7 cut(s)	23, 483, 859, 1010, 1469, 1479, 1530
DpnII	GATC	7 cut(s)	21, 481, 857, 1008, 1467, 1477, 1528
DraIII	CACNNNGTG	1 cut(s)	1371
Eam1104I	CTCTTC	3 cut(s)	411, 516, 557
EarI	CTCTTC	3 cut(s)	411, 516, 557
Eco130I	CCWWGG	5 cut(s)	163, 242, 318, 1245, 1334
Eco31I	GGTCTC	2 cut(s)	296, 708
Eco32I	GATATC	1 cut(s)	1305
Eco47I	GGWCC	1 cut(s)	1390
Eco57I	CTGAAG	4 cut(s)	836, 1045, 1667, 1716
Eco88I	CYCGRG	1 cut(s)	299
EcoO109I	RGGNCCY	2 cut(s)	167, 1674
EcoRI	GAATTC	1 cut(s)	712
EcoRII	CCWGG	3 cut(s)	14, 29, 1461
EcoRV	GATATC	1 cut(s)	1305
EcoT14I	CCWWGG	5 cut(s)	163, 242, 318, 1245, 1334
EgeI	GGCGCC	1 cut(s)	346
EheI	GGCGCC	1 cut(s)	346
ErhI	CCWWGG	5 cut(s)	163, 242, 318, 1245, 1334
FaeI	CATG	7 cut(s)	255, 322, 872, 973, 1249, 1633, 1714
FaqI	GGGAC	1 cut(s)	65
FatI	CATG	7 cut(s)	251, 318, 868, 969, 1245, 1629, 1710
FauI	CCCGC	1 cut(s)	116
FauNDI	CATATG	1 cut(s)	1044
FblI	GTMKAC	1 cut(s)	189
Fnu4HI	GCNGC	3 cut(s)	112, 644, 762
FokI	GGATG	5 cut(s)	11, 80, 119, 1329, 1519
Fsp4HI	GCNGC	3 cut(s)	112, 644, 762
FspBI	CTAG	3 cut(s)	507, 1448, 1554
FspI	TGCGCA	1 cut(s)	672
GlaI	GCGC	3 cut(s)	346, 672, 1322
GluI	GCNGC	3 cut(s)	112, 644, 762
GsaI	CCCAGC	2 cut(s)	88, 152
GsuI	CTGGAG	4 cut(s)	37, 596, 673, 1484
HaeII	RGCGCY	1 cut(s)	348
HaeIII	GGCC	8 cut(s)	34, 105, 168, 257, 602, 730, 1101, 1675
HapII	CCGG	2 cut(s)	465, 1615
HgaI	GACGC	3 cut(s)	67, 103, 322
HhaI	GCGC	3 cut(s)	347, 673, 1323
Hin1I	GRCGYC	3 cut(s)	114, 333, 345
Hin1II	CATG	7 cut(s)	255, 322, 872, 973, 1249, 1633, 1714
Hin6I	GCGC	3 cut(s)	345, 671, 1321
HinP1I	GCGC	3 cut(s)	345, 671, 1321
HincII	GTYRAC	2 cut(s)	190, 1644
HindII	GTYRAC	2 cut(s)	190, 1644
HinfI	GANTC	6 cut(s)	200, 314, 634, 1021, 1202, 1619
HpaII	CCGG	2 cut(s)	465, 1615
HphI	GGTGA	4 cut(s)	16, 59, 530, 643
Hpy166II	GTNNAC	6 cut(s)	7, 190, 720, 1331, 1374, 1644
Hpy188I	TCNGA	6 cut(s)	283, 816, 943, 1072, 1158, 1735
Hpy188III	TCNNGA	5 cut(s)	301, 986, 1004, 1554, 1760
Hpy8I	GTNNAC	6 cut(s)	7, 190, 720, 1331, 1374, 1644
Hpy99I	CGWCG	3 cut(s)	119, 191, 1751
HpyCH4III	ACNGT	4 cut(s)	49, 392, 1231, 1569
HpyCH4IV	ACGT	3 cut(s)	142, 186, 363
HpyF10VI	GCNNNNNNNGC	9 cut(s)	111, 117, 254, 494, 503, 608, 902, 1286, 1707
HpyF3I	CTNAG	2 cut(s)	429, 786
HpySE526I	ACGT	3 cut(s)	142, 186, 363
Hsp92I	GRCGYC	3 cut(s)	114, 333, 345
Hsp92II	CATG	7 cut(s)	255, 322, 872, 973, 1249, 1633, 1714
HspAI	GCGC	3 cut(s)	345, 671, 1321
KasI	GGCGCC	1 cut(s)	344
KspI	CCGCGG	1 cut(s)	112
Kzo9I	GATC	7 cut(s)	21, 481, 857, 1008, 1467, 1477, 1528
LmnI	GCTCC	1 cut(s)	1774
Lsp1109I	GCAGC	2 cut(s)	655, 748
LweI	GCATC	1 cut(s)	1276
MaeI	CTAG	3 cut(s)	507, 1448, 1554
MaeII	ACGT	3 cut(s)	142, 186, 363
MaeIII	GTNAC	5 cut(s)	570, 753, 934, 947, 1048
MalI	GATC	7 cut(s)	23, 483, 859, 1010, 1469, 1479, 1530
MboI	GATC	7 cut(s)	21, 481, 857, 1008, 1467, 1477, 1528
MfeI	CAATTG	1 cut(s)	259
MflI	RGATCY	3 cut(s)	1008, 1467, 1528
MhlI	GDGCHC	3 cut(s)	428, 1333, 1376
Mly113I	GGCGCC	1 cut(s)	345
MlyI	GAGTC	1 cut(s)	209
MmeI	TCCRAC	2 cut(s)	462, 723
MseI	TTAA	3 cut(s)	1440, 1601, 1704
MspA1I	CMGCKG	2 cut(s)	111, 1396
MspI	CCGG	2 cut(s)	465, 1615
MspR9I	CCNGG	4 cut(s)	16, 31, 1463, 1616
MunI	CAATTG	1 cut(s)	259
Mva1269I	GAATGC	1 cut(s)	826
MvaI	CCWGG	3 cut(s)	16, 31, 1463
MvnI	CGCG	2 cut(s)	78, 111
MwoI	GCNNNNNNNGC	9 cut(s)	111, 117, 254, 494, 503, 608, 902, 1286, 1707
NarI	GGCGCC	1 cut(s)	345
NciI	CCSGG	1 cut(s)	1616
NcoI	CCATGG	2 cut(s)	318, 1245
NdeI	CATATG	1 cut(s)	1044
NdeII	GATC	7 cut(s)	21, 481, 857, 1008, 1467, 1477, 1528
NlaIII	CATG	7 cut(s)	255, 322, 872, 973, 1249, 1633, 1714
NlaIV	GGNNCC	6 cut(s)	106, 161, 169, 346, 1115, 1530
NmeAIII	GCCGAG	4 cut(s)	223, 321, 437, 1114
NmuCI	GTSAC	3 cut(s)	570, 753, 934
NsbI	TGCGCA	1 cut(s)	672
NspI	RCATGY	1 cut(s)	1714
PaeI	GCATGC	1 cut(s)	1714
PaeR7I	CTCGAG	1 cut(s)	299
PcsI	WCGNNNNNNNCGW	1 cut(s)	195
PctI	GAATGC	1 cut(s)	826
PfeI	GAWTC	5 cut(s)	314, 634, 1021, 1202, 1619
PflMI	CCANNNNNTGG	1 cut(s)	1399
PfoI	TCCNGGA	1 cut(s)	1614
PkrI	GCNGC	3 cut(s)	113, 645, 763
PleI	GAGTC	1 cut(s)	208
PluTI	GGCGCC	1 cut(s)	348
PpsI	GAGTC	1 cut(s)	208
Psp6I	CCWGG	3 cut(s)	14, 29, 1461
PspFI	CCCAGC	2 cut(s)	84, 148
PspGI	CCWGG	3 cut(s)	14, 29, 1461
PspN4I	GGNNCC	6 cut(s)	106, 161, 169, 346, 1115, 1530
PspPI	GGNCC	6 cut(s)	104, 167, 255, 1100, 1390, 1674
PstNI	CAGNNNCTG	1 cut(s)	1739
PsuI	RGATCY	3 cut(s)	1008, 1467, 1528
PvuII	CAGCTG	1 cut(s)	1396
RsaI	GTAC	5 cut(s)	553, 721, 866, 930, 959
RsaNI	GTAC	5 cut(s)	552, 720, 865, 929, 958
SacII	CCGCGG	1 cut(s)	112
SalI	GTCGAC	1 cut(s)	188
SaqAI	TTAA	3 cut(s)	1440, 1601, 1704
SatI	GCNGC	3 cut(s)	112, 644, 762
Sau3AI	GATC	7 cut(s)	21, 481, 857, 1008, 1467, 1477, 1528
Sau96I	GGNCC	6 cut(s)	104, 167, 255, 1100, 1390, 1674
SchI	GAGTC	1 cut(s)	209
ScrFI	CCNGG	4 cut(s)	16, 31, 1463, 1616
SduI	GDGCHC	3 cut(s)	428, 1333, 1376
SfaNI	GCATC	1 cut(s)	1276
SfcI	CTRYAG	1 cut(s)	1230
SfoI	GGCGCC	1 cut(s)	346
Sfr274I	CTCGAG	1 cut(s)	299
Sfr303I	CCGCGG	1 cut(s)	112
SgrBI	CCGCGG	1 cut(s)	112
SinI	GGWCC	1 cut(s)	1390
SlaI	CTCGAG	1 cut(s)	299
SmlI	CTYRAG	2 cut(s)	299, 1136
SmoI	CTYRAG	2 cut(s)	299, 1136
SphI	GCATGC	1 cut(s)	1714
SsiI	CCGC	5 cut(s)	76, 109, 111, 446, 488
SspDI	GGCGCC	1 cut(s)	344
SspMI	CTAG	3 cut(s)	507, 1448, 1554
StyD4I	CCNGG	4 cut(s)	14, 29, 1461, 1614
StyI	CCWWGG	5 cut(s)	163, 242, 318, 1245, 1334
TaaI	ACNGT	4 cut(s)	49, 392, 1231, 1569
TaiI	ACGT	3 cut(s)	145, 189, 366
TatI	WGTACW	2 cut(s)	719, 928
TauI	GCSGC	1 cut(s)	114
TfiI	GAWTC	5 cut(s)	314, 634, 1021, 1202, 1619
Tru1I	TTAA	3 cut(s)	1440, 1601, 1704
Tru9I	TTAA	3 cut(s)	1440, 1601, 1704
TscAI	CASTG	5 cut(s)	184, 395, 579, 859, 1381
TseFI	GTSAC	3 cut(s)	570, 753, 934
TseI	GCWGC	2 cut(s)	643, 761
Tsp45I	GTSAC	3 cut(s)	570, 753, 934
TspDTI	ATGAA	8 cut(s)	240, 834, 985, 1194, 1374, 1641, 1648, 1679
TspRI	CASTG	5 cut(s)	184, 395, 579, 859, 1381
Van91I	CCANNNNNTGG	1 cut(s)	1399
VneI	GTGCAC	2 cut(s)	1329, 1372
VpaK11BI	GGWCC	1 cut(s)	1390
XapI	RAATTY	4 cut(s)	712, 1430, 1648, 1751
XbaI	TCTAGA	1 cut(s)	1553
XceI	RCATGY	1 cut(s)	1714
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1042
XhoI	CTCGAG	1 cut(s)	299
XmiI	GTMKAC	1 cut(s)	189
XspI	CTAG	3 cut(s)	507, 1448, 1554

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.