Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr09

Orthogroup ID

OG0010317

Physical Location & Seq

Genomic Coordinates Reverse (-)

12470512 .. 12475097

Gene Structure 4586 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD09G1156700.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1656 bp

ATGCTATCGACACTCCAACCGCCGCGCTCGCTCTCCCACTTCCGCACAAACCCCACCCTCCTACTCCGCTACACTTCCCTTAAAACCCTCTCCTCCTTATCCTCACAGCCCGTCACCCACTCCACCCTCACTGACCAACCCTGCTCCCCAAACCCACTCCCCCACTCCCAAATCCTCTCCACCCGCCACTCCCTCCTCTCCCGCCACCTCACCGCCACCCAACTCGCCGACTCCTTCCTCGCCCGCCTCCGCCTCACCGAGCCCCACCTCCGGTCCTTCCTCCACGTCTCCGACTCGGTCCTCGCTCAAGCCCGCGAGCTCGACGAGAAGATTCAGAGGAATGAGGAGTTGGGTCCCCTGGCTGGGGTCCTTGTCGCCGTCAAGGACAATATCTGCACGGCTGAGATGCCGTCAACCGCTGGGTCTCGTGTTCTGGAGGGCTATACGCCGCCGTACGACGCCACTGCCGTCAGGAAGATTAAAGAGCTGGGTGGGATTGTGGTGGGAAAGACCAATTTGGATGAGTTTGGCATGGGTAGCACCACTGAAGGCTCTGCATTTCAGGTGACTGCAAACCCGTGGGACGTGTCTCGGGTGCCAGGAGGGTCATCGGGAGGCTCCGCTGCAGCTGTGTCTGCTAGGCAGTGCATGGTGTCGTTGGGAAGTGATACTGGTGGAAGTGTGAGGCAGCCAGCATCTTTTTGTGGTGTTGTTGGGTTGAAGCCCACGTATGGGCGCGTCTCGAGATTCGGACTTATGGCATATGCGTCGTCGCTTGATGTCATTGGCTGCTTTGGTACGTCTGTTGCTGATGCTGGGATTCTTCTTCAGGCAATTTCTGGTCATGATAGACTTGATGCAACCAGCAGCAAGCGTGAGGTTCCCGACCTTGCAGCTGAATTTGTTTCCATAAGTTCGACAATTTCTAAACCTCTTAAAGGATTGAGAATTGGTCTGATCCAGGAAACTCTGGATGGTGGTGTTGATACTGCAGTAACTTCTGCAGTTCGTAGTGCTGCTTTGCATCTTGAAGAATTAGGATGTTCCGTAACCGAGGTCTCATTACCATCTTTCTCACTTGGGTTGCCAGCCTATTACATTCTTGCTTCATCTGAGTCATCTTCAAACTTATCACGTTATGATGGTGTCAGGTATGGAAACCATGTTGCTGCTGATGAGTTGAACTCACAATATAAGGATTCCCGAGCCAAGGGCTTTGGTTCTGAGGTTAAAAGGAGAATTCTAACGGGAACATATGCCCTTTCAGCTGGTTATTATGATGCATATTATAAGCGCGCCCAGCAGGTGAGGACTATAATTCGGAAAAGCTTCAAGGCAGCACTAGATGAACATGACATCTTAATTTCACCTGCGGCTCCATCTGCTGCTTATAAGATTGGTGAAAAGAAAAATGATCCTCTAGCAATGTATGCAGGTGACATAATGACTGTCAATGTTAACTTGGCAGGTCTACCTGCACTGGTTTTGCCATGTGGATTTGTTGAGGGGGGTTCTGCAGGCCTTCCTGTTGGTCTTCAAATGATCGGTGCAGCATTTGACGAGGGAAAGTTGCTTAAGGTGGGTCATATATTTGAGCAGACTCTGCAGAATTGCAATTTTGTTCCTCCATTGATAGCAGATGAGCTCACATCCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0009507 GO:0009532 GO:0009536 GO:0009570 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464

KEGG Pathways

Metabolic & Signaling

ko00970 ko01100 map00970 map01100

Pfam Domains

Protein Families

Amidase

Protein Analysis

552

Amino Acids

58.48

Weight (kDa)

6.87

Isoelectric Point (pI)

42.91

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Amidase	PF01425	77 - 525	1.9e-143	Amidase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010317)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G25660
fragaria_vesca	FvH4_6g37630 FvH4_6g37630 FvH4_6g37630
malus_domestica	MD09G1156700.v1.1 MD17G1143200.v1.1
prunus_persica	Prupe.3G169900_v2.0.a1 Prupe.3G169900_v2.0.a1 Prupe.3G169900_v2.0.a1
pyrus_communis	pycom09g07540 pycom17g13630
rosa_chinensis	RchiOBHm_Chr2g0150631
rosa_laevigata	RLG00000020501
rosa_multiflora	Rmu_ssc0000480.1_g000031
rosa_roxburghii	Rroxscaffold_2G00097060
rosa_rugosa	Rorug02G0421800
rosa_samantha	Rh2AG481500 Rh2BG493900 Rh2CG467900 Rh2DG502900
rosa_wichuraiana	Rw2G039500

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	1290, 1392
AarI	CACCTGC	3 cut(s)	1294, 1378, 1424
Acc36I	ACCTGC	5 cut(s)	1294, 1378, 1424, 1457, 1483
AccB1I	GGYRCC	1 cut(s)	595
AccI	GTMKAC	1 cut(s)	1471
AccII	CGCG	4 cut(s)	25, 315, 738, 1296
AclWI	GGATC	2 cut(s)	952, 1409
AcsI	RAATTY	2 cut(s)	899, 1239
AcuI	CTGAAG	2 cut(s)	567, 812
AcyI	GRCGYC	1 cut(s)	459
AfaI	GTAC	2 cut(s)	455, 799
AfiI	CCNNNNNNNGG	8 cut(s)	270, 362, 363, 364, 731, 732, 938, 1210
AflII	CTTAAG	1 cut(s)	1574
AflIII	ACRYGT	1 cut(s)	585
AgsI	TTSAA	6 cut(s)	721, 1031, 1125, 1183, 1333, 1538
AjiI	CACGTC	2 cut(s)	286, 586
AjnI	CCWGG	3 cut(s)	357, 598, 960
AjuI	GAANNNNNNNTTGG	2 cut(s)	332, 364
AluBI	AGCT	7 cut(s)	319, 487, 629, 896, 1268, 1329, 1645
AluI	AGCT	7 cut(s)	319, 487, 629, 896, 1268, 1329, 1645
Alw21I	GWGCWC	2 cut(s)	321, 1647
Alw26I	GTCTC	5 cut(s)	292, 429, 594, 745, 1063
AlwI	GGATC	2 cut(s)	952, 1409
AlwNI	CAGNNNCTG	1 cut(s)	1603
Ama87I	CYCGRG	3 cut(s)	591, 742, 1203
AoxI	GGCC	1 cut(s)	1519
ApoI	RAATTY	2 cut(s)	899, 1239
Asp700I	GAANNNNTTC	1 cut(s)	1328
AspLEI	GCGC	4 cut(s)	27, 738, 1296, 1298
AspS9I	GGNCC	4 cut(s)	273, 298, 353, 367
AsuHPI	GGTGA	8 cut(s)	106, 202, 247, 577, 1318, 1359, 1412, 1448
AvaI	CYCGRG	3 cut(s)	591, 742, 1203
AvaII	GGWCC	4 cut(s)	273, 298, 353, 367
BaeI	ACNNNNGTAYC	4 cut(s)	789, 822, 978, 1011
BanI	GGYRCC	1 cut(s)	595
BanII	GRGCYC	3 cut(s)	264, 321, 1647
BauI	CACGAG	1 cut(s)	426
BbsI	GAAGAC	1 cut(s)	1526
Bbv12I	GWGCWC	2 cut(s)	321, 1647
BccI	CCATC	4 cut(s)	968, 1075, 1136, 1387
BceAI	ACGGC	5 cut(s)	362, 394, 414, 436, 452
BcgI	CGANNNNNNTGC	4 cut(s)	446, 480, 750, 784
BciT130I	CCWGG	3 cut(s)	359, 600, 962
BcoDI	GTCTC	5 cut(s)	292, 429, 594, 745, 1063
BfaI	CTAG	4 cut(s)	639, 1343, 1421, 1654
BfmI	CTRYAG	5 cut(s)	624, 990, 1002, 1515, 1604
BfrI	CTTAAG	1 cut(s)	1574
BfuAI	ACCTGC	5 cut(s)	1294, 1378, 1424, 1457, 1483
Bme1390I	CCNGG	3 cut(s)	359, 600, 962
Bme18I	GGWCC	4 cut(s)	273, 298, 353, 367
BmeT110I	CYCGRG	3 cut(s)	591, 742, 1203
BmgBI	CACGTC	2 cut(s)	286, 586
BmgT120I	GGNCC	4 cut(s)	273, 298, 353, 367
BmiI	GGNNCC	7 cut(s)	354, 355, 368, 597, 619, 882, 1377
BmrFI	CCNGG	3 cut(s)	359, 600, 962
BmsI	GCATC	6 cut(s)	396, 704, 802, 847, 1033, 1270
BpiI	GAAGAC	1 cut(s)	1526
BplI	GAGNNNNNCTC	2 cut(s)	1169, 1201
BpmI	CTGGAG	1 cut(s)	455
BpuEI	CTTGAG	1 cut(s)	291
BsaAI	YACGTR	1 cut(s)	729
BsaHI	GRCGYC	1 cut(s)	459
BsaI	GGTCTC	2 cut(s)	429, 1063
BsaJI	CCNNGG	4 cut(s)	357, 578, 1053, 1209
BsaWI	WCCGGW	1 cut(s)	270
Bsc4I	CCNNNNNNNGG	8 cut(s)	270, 362, 363, 364, 731, 732, 938, 1210
Bse1I	ACTGG	2 cut(s)	676, 1485
Bse3DI	GCAATG	1 cut(s)	1431
BseBI	CCWGG	3 cut(s)	359, 600, 962
BseDI	CCNNGG	4 cut(s)	357, 578, 1053, 1209
BseGI	GGATG	4 cut(s)	526, 979, 1046, 1649
BseLI	CCNNNNNNNGG	8 cut(s)	270, 362, 363, 364, 731, 732, 938, 1210
BseMI	GCAATG	1 cut(s)	1431
BseMII	CTCAG	3 cut(s)	393, 1104, 1215
BseNI	ACTGG	2 cut(s)	676, 1485
BsePI	GCGCGC	1 cut(s)	1294
BseRI	GAGGAG	3 cut(s)	82, 185, 359
BseYI	CCCAGC	5 cut(s)	362, 419, 487, 815, 1299
BsgI	GTGCAG	3 cut(s)	379, 1461, 1569
Bsh1236I	CGCG	4 cut(s)	25, 315, 738, 1296
BshFI	GGCC	1 cut(s)	1521
BshNI	GGYRCC	1 cut(s)	595
BsiHKAI	GWGCWC	2 cut(s)	321, 1647
BsiHKCI	CYCGRG	3 cut(s)	591, 742, 1203
BsiSI	CCGG	1 cut(s)	271
BsiWI	CGTACG	1 cut(s)	453
BslFI	GGGAC	2 cut(s)	339, 596
BslI	CCNNNNNNNGG	8 cut(s)	270, 362, 363, 364, 731, 732, 938, 1210
BsmAI	GTCTC	5 cut(s)	292, 429, 594, 745, 1063
BsmBI	CGTCTC	2 cut(s)	292, 745
BsmFI	GGGAC	2 cut(s)	339, 596
BsnI	GGCC	1 cut(s)	1521
Bso31I	GGTCTC	2 cut(s)	429, 1063
BsoBI	CYCGRG	3 cut(s)	591, 742, 1203
Bsp1286I	GDGCHC	3 cut(s)	264, 321, 1647
Bsp143I	GATC	3 cut(s)	957, 1414, 1542
BspANI	GGCC	1 cut(s)	1521
BspCNI	CTCAG	3 cut(s)	394, 1105, 1216
BspFNI	CGCG	4 cut(s)	25, 315, 738, 1296
BspHI	TCATGA	1 cut(s)	844
BspLI	GGNNCC	7 cut(s)	354, 355, 368, 597, 619, 882, 1377
BspMAI	CTGCAG	5 cut(s)	628, 994, 1006, 1519, 1608
BspMI	ACCTGC	5 cut(s)	1294, 1378, 1424, 1457, 1483
BspPI	GGATC	2 cut(s)	952, 1409
BspT107I	GGYRCC	1 cut(s)	595
BspTI	CTTAAG	1 cut(s)	1574
BspTNI	GGTCTC	2 cut(s)	429, 1063
BsrDI	GCAATG	1 cut(s)	1431
BsrI	ACTGG	2 cut(s)	676, 1485
BssECI	CCNNGG	4 cut(s)	357, 578, 1053, 1209
BssHII	GCGCGC	1 cut(s)	1294
BssMI	GATC	3 cut(s)	957, 1414, 1542
BssNI	GRCGYC	1 cut(s)	459
BssSI	CACGAG	1 cut(s)	426
BssT1I	CCWWGG	1 cut(s)	1209
Bst2BI	CACGAG	1 cut(s)	426
Bst2UI	CCWGG	3 cut(s)	359, 600, 962
Bst4CI	ACNGT	1 cut(s)	1450
BstACI	GRCGYC	1 cut(s)	459
BstAFI	CTTAAG	1 cut(s)	1574
BstAPI	GCANNNNNTGC	2 cut(s)	1430, 1603
BstBAI	YACGTR	1 cut(s)	729
BstC8I	GCNNGC	9 cut(s)	29, 244, 313, 317, 693, 872, 1089, 1296, 1519
BstDEI	CTNAG	3 cut(s)	402, 1113, 1224
BstDSI	CCRYGG	1 cut(s)	578
BstENI	CCTNNNNNAGG	1 cut(s)	936
BstF5I	GGATG	4 cut(s)	526, 979, 1046, 1649
BstFNI	CGCG	4 cut(s)	25, 315, 738, 1296
BstHHI	GCGC	4 cut(s)	27, 738, 1296, 1298
BstKTI	GATC	3 cut(s)	960, 1417, 1545
BstMAI	GTCTC	5 cut(s)	292, 429, 594, 745, 1063
BstMBI	GATC	3 cut(s)	957, 1414, 1542
BstMWI	GCNNNNNNNGC	8 cut(s)	28, 537, 635, 1265, 1300, 1382, 1430, 1603
BstNI	CCWGG	3 cut(s)	359, 600, 962
BstSCI	CCNGG	3 cut(s)	357, 598, 960
BstSFI	CTRYAG	5 cut(s)	624, 990, 1002, 1515, 1604
BstUI	CGCG	4 cut(s)	25, 315, 738, 1296
BstV2I	GAAGAC	1 cut(s)	1526
BsuRI	GGCC	1 cut(s)	1521
BtgI	CCRYGG	1 cut(s)	578
BtrI	CACGTC	2 cut(s)	286, 586
BtsCI	GGATG	4 cut(s)	526, 979, 1046, 1649
BtsI	GCAGTG	2 cut(s)	462, 650
BtsIMutI	CAGTG	5 cut(s)	129, 462, 543, 650, 1478
BveI	ACCTGC	5 cut(s)	1294, 1378, 1424, 1457, 1483
Cac8I	GCNNGC	9 cut(s)	29, 244, 313, 317, 693, 872, 1089, 1296, 1519
CaiI	CAGNNNCTG	1 cut(s)	1603
CciI	TCATGA	1 cut(s)	844
CfoI	GCGC	4 cut(s)	27, 738, 1296, 1298
Cfr13I	GGNCC	4 cut(s)	273, 298, 353, 367
CseI	GACGC	3 cut(s)	467, 727, 756
Csp6I	GTAC	2 cut(s)	454, 798
CviAII	CATG	6 cut(s)	532, 649, 845, 1163, 1352, 1491
CviQI	GTAC	2 cut(s)	454, 798
DdeI	CTNAG	3 cut(s)	402, 1113, 1224
DpnI	GATC	3 cut(s)	959, 1416, 1544
DpnII	GATC	3 cut(s)	957, 1414, 1542
EciI	GGCGGA	1 cut(s)	239
Ecl136II	GAGCTC	2 cut(s)	319, 1645
Eco130I	CCWWGG	1 cut(s)	1209
Eco147I	AGGCCT	1 cut(s)	1521
Eco24I	GRGCYC	3 cut(s)	264, 321, 1647
Eco31I	GGTCTC	2 cut(s)	429, 1063
Eco47I	GGWCC	4 cut(s)	273, 298, 353, 367
Eco53kI	GAGCTC	2 cut(s)	319, 1645
Eco57I	CTGAAG	2 cut(s)	567, 812
Eco88I	CYCGRG	3 cut(s)	591, 742, 1203
EcoICRI	GAGCTC	2 cut(s)	319, 1645
EcoNI	CCTNNNNNAGG	1 cut(s)	936
EcoO109I	RGGNCCY	2 cut(s)	353, 367
EcoRI	GAATTC	1 cut(s)	1239
EcoRII	CCWGG	3 cut(s)	357, 598, 960
EcoT14I	CCWWGG	1 cut(s)	1209
EcoT22I	ATGCAT	1 cut(s)	1285
EcoT38I	GRGCYC	3 cut(s)	264, 321, 1647
ErhI	CCWWGG	1 cut(s)	1209
Esp3I	CGTCTC	2 cut(s)	292, 745
FaeI	CATG	6 cut(s)	535, 652, 848, 1166, 1355, 1494
FaqI	GGGAC	2 cut(s)	339, 596
FatI	CATG	6 cut(s)	531, 648, 844, 1162, 1351, 1490
FauI	CCCGC	4 cut(s)	191, 209, 251, 320
FauNDI	CATATG	2 cut(s)	763, 1255
FblI	GTMKAC	1 cut(s)	1471
FokI	GGATG	4 cut(s)	533, 986, 1053, 1636
FriOI	GRGCYC	3 cut(s)	264, 321, 1647
FspBI	CTAG	4 cut(s)	639, 1343, 1421, 1654
GlaI	GCGC	4 cut(s)	26, 737, 1295, 1297
GsaI	CCCAGC	5 cut(s)	366, 423, 491, 819, 1303
GsuI	CTGGAG	1 cut(s)	455
HaeIII	GGCC	1 cut(s)	1521
HapII	CCGG	1 cut(s)	271
HgaI	GACGC	3 cut(s)	467, 727, 756
HhaI	GCGC	4 cut(s)	27, 738, 1296, 1298
Hin1I	GRCGYC	1 cut(s)	459
Hin1II	CATG	6 cut(s)	535, 652, 848, 1166, 1355, 1494
Hin6I	GCGC	4 cut(s)	25, 736, 1294, 1296
HinP1I	GCGC	4 cut(s)	25, 736, 1294, 1296
HincII	GTYRAC	2 cut(s)	414, 1459
HindII	GTYRAC	2 cut(s)	414, 1459
HindIII	AAGCTT	1 cut(s)	1327
HinfI	GANTC	8 cut(s)	230, 293, 331, 747, 820, 1115, 1199, 1600
HpaI	GTTAAC	1 cut(s)	1459
HpaII	CCGG	1 cut(s)	271
HphI	GGTGA	8 cut(s)	106, 202, 247, 577, 1318, 1359, 1412, 1448
Hpy166II	GTNNAC	3 cut(s)	414, 1459, 1472
Hpy188I	TCNGA	7 cut(s)	292, 336, 752, 957, 1114, 1225, 1323
Hpy8I	GTNNAC	3 cut(s)	414, 1459, 1472
Hpy99I	CGWCG	4 cut(s)	326, 461, 772, 775
HpyAV	CCTTC	4 cut(s)	244, 286, 542, 1532
HpyCH4III	ACNGT	1 cut(s)	1450
HpyCH4IV	ACGT	5 cut(s)	285, 585, 728, 800, 1135
HpyF10VI	GCNNNNNNNGC	8 cut(s)	28, 537, 635, 1265, 1300, 1382, 1430, 1603
HpyF3I	CTNAG	3 cut(s)	402, 1113, 1224
HpySE526I	ACGT	5 cut(s)	285, 585, 728, 800, 1135
Hsp92I	GRCGYC	1 cut(s)	459
Hsp92II	CATG	6 cut(s)	535, 652, 848, 1166, 1355, 1494
HspAI	GCGC	4 cut(s)	25, 736, 1294, 1296
KflI	GGGWCCC	1 cut(s)	353
KspAI	GTTAAC	1 cut(s)	1459
Kzo9I	GATC	3 cut(s)	957, 1414, 1542
LmnI	GCTCC	3 cut(s)	149, 623, 1381
LweI	GCATC	6 cut(s)	396, 704, 802, 847, 1033, 1270
MaeI	CTAG	4 cut(s)	639, 1343, 1421, 1654
MaeII	ACGT	5 cut(s)	285, 585, 728, 800, 1135
MaeIII	GTNAC	5 cut(s)	112, 565, 994, 1048, 1436
MalI	GATC	3 cut(s)	959, 1416, 1544
MboI	GATC	3 cut(s)	957, 1414, 1542
MboII	GAAGA	7 cut(s)	340, 487, 815, 818, 1043, 1113, 1526
MhlI	GDGCHC	3 cut(s)	264, 321, 1647
MlyI	GAGTC	4 cut(s)	224, 287, 1124, 1594
MmeI	TCCRAC	2 cut(s)	40, 315
Mph1103I	ATGCAT	1 cut(s)	1285
MroXI	GAANNNNTTC	1 cut(s)	1328
MseI	TTAA	7 cut(s)	81, 480, 936, 1230, 1361, 1458, 1575
MspA1I	CMGCKG	5 cut(s)	419, 623, 629, 896, 1268
MspCI	CTTAAG	1 cut(s)	1574
MspI	CCGG	1 cut(s)	271
MspR9I	CCNGG	3 cut(s)	359, 600, 962
MvaI	CCWGG	3 cut(s)	359, 600, 962
MvnI	CGCG	4 cut(s)	25, 315, 738, 1296
MwoI	GCNNNNNNNGC	8 cut(s)	28, 537, 635, 1265, 1300, 1382, 1430, 1603
NdeI	CATATG	2 cut(s)	763, 1255
NdeII	GATC	3 cut(s)	957, 1414, 1542
NlaIII	CATG	6 cut(s)	535, 652, 848, 1166, 1355, 1494
NlaIV	GGNNCC	7 cut(s)	354, 355, 368, 597, 619, 882, 1377
NmuCI	GTSAC	3 cut(s)	112, 565, 1436
NsiI	ATGCAT	1 cut(s)	1285
PaeR7I	CTCGAG	1 cut(s)	742
PagI	TCATGA	1 cut(s)	844
PaqCI	CACCTGC	3 cut(s)	1294, 1378, 1424
PauI	GCGCGC	1 cut(s)	1294
PceI	AGGCCT	1 cut(s)	1521
PcsI	WCGNNNNNNNCGW	1 cut(s)	465
PdmI	GAANNNNTTC	1 cut(s)	1328
PfeI	GAWTC	4 cut(s)	331, 747, 820, 1199
Pfl23II	CGTACG	1 cut(s)	453
PflFI	GACNNNGTC	1 cut(s)	296
PfoI	TCCNGGA	1 cut(s)	960
PleI	GAGTC	4 cut(s)	224, 287, 1123, 1594
PpsI	GAGTC	4 cut(s)	224, 287, 1123, 1594
Ppu21I	YACGTR	1 cut(s)	729
PpuMI	RGGWCCY	2 cut(s)	353, 367
PsiI	TTATAA	2 cut(s)	1290, 1392
Psp124BI	GAGCTC	2 cut(s)	321, 1647
Psp5II	RGGWCCY	2 cut(s)	353, 367
Psp6I	CCWGG	3 cut(s)	357, 598, 960
PspFI	CCCAGC	5 cut(s)	362, 419, 487, 815, 1299
PspGI	CCWGG	3 cut(s)	357, 598, 960
PspLI	CGTACG	1 cut(s)	453
PspN4I	GGNNCC	7 cut(s)	354, 355, 368, 597, 619, 882, 1377
PspPI	GGNCC	4 cut(s)	273, 298, 353, 367
PspPPI	RGGWCCY	2 cut(s)	353, 367
PstI	CTGCAG	5 cut(s)	628, 994, 1006, 1519, 1608
PstNI	CAGNNNCTG	1 cut(s)	1603
PsyI	GACNNNGTC	1 cut(s)	296
PteI	GCGCGC	1 cut(s)	1294
PvuII	CAGCTG	3 cut(s)	629, 896, 1268
RsaI	GTAC	2 cut(s)	455, 799
RsaNI	GTAC	2 cut(s)	454, 798
SacI	GAGCTC	2 cut(s)	321, 1647
SaqAI	TTAA	7 cut(s)	81, 480, 936, 1230, 1361, 1458, 1575
Sau3AI	GATC	3 cut(s)	957, 1414, 1542
Sau96I	GGNCC	4 cut(s)	273, 298, 353, 367
SchI	GAGTC	4 cut(s)	224, 287, 1124, 1594
ScrFI	CCNGG	3 cut(s)	359, 600, 962
SduI	GDGCHC	3 cut(s)	264, 321, 1647
SfaNI	GCATC	6 cut(s)	396, 704, 802, 847, 1033, 1270
SfcI	CTRYAG	5 cut(s)	624, 990, 1002, 1515, 1604
Sfr274I	CTCGAG	1 cut(s)	742
SinI	GGWCC	4 cut(s)	273, 298, 353, 367
SlaI	CTCGAG	1 cut(s)	742
SmlI	CTYRAG	3 cut(s)	306, 742, 1574
SmoI	CTYRAG	3 cut(s)	306, 742, 1574
SseBI	AGGCCT	1 cut(s)	1521
SspMI	CTAG	4 cut(s)	639, 1343, 1421, 1654
SstI	GAGCTC	2 cut(s)	321, 1647
StuI	AGGCCT	1 cut(s)	1521
StyD4I	CCNGG	3 cut(s)	357, 598, 960
StyI	CCWWGG	1 cut(s)	1209
TaaI	ACNGT	1 cut(s)	1450
TaiI	ACGT	5 cut(s)	288, 588, 731, 803, 1138
TaqI	TCGA	4 cut(s)	8, 321, 743, 917
TaqII	GACCGA	1 cut(s)	286
TauI	GCSGC	3 cut(s)	25, 451, 1376
TfiI	GAWTC	4 cut(s)	331, 747, 820, 1199
Tru1I	TTAA	7 cut(s)	81, 480, 936, 1230, 1361, 1458, 1575
Tru9I	TTAA	7 cut(s)	81, 480, 936, 1230, 1361, 1458, 1575
TscAI	CASTG	5 cut(s)	136, 469, 550, 650, 1485
TseFI	GTSAC	3 cut(s)	112, 565, 1436
Tsp45I	GTSAC	3 cut(s)	112, 565, 1436
TspDTI	ATGAA	2 cut(s)	1098, 1362
TspGWI	ACGGA	1 cut(s)	1036
TspRI	CASTG	5 cut(s)	136, 469, 550, 650, 1485
Tth111I	GACNNNGTC	1 cut(s)	296
Vha464I	CTTAAG	1 cut(s)	1574
VpaK11BI	GGWCC	4 cut(s)	273, 298, 353, 367
XagI	CCTNNNNNAGG	1 cut(s)	936
XapI	RAATTY	2 cut(s)	899, 1239
XhoI	CTCGAG	1 cut(s)	742
XmiI	GTMKAC	1 cut(s)	1471
XmnI	GAANNNNTTC	1 cut(s)	1328
XspI	CTAG	4 cut(s)	639, 1343, 1421, 1654
Zsp2I	ATGCAT	1 cut(s)	1285

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.