Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr09

Orthogroup ID

OG0015443

Physical Location & Seq

Genomic Coordinates Reverse (-)

15735881 .. 15737539

Gene Structure 1659 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD09G1183000.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1659 bp

ATGACCACTGAACAACCAGAGCCAAACTCCACCTCAGATCATATCTTGGATTGGCTTGAAGATTCAGTCACTTTCTTCCCATCTTTCTGGGATGATCCTTACCATTCAAATGACATCGATGGAGGACTTCAATGGTGGGATGAGAGCCATGATCTTGTTCATCCCACCACCAATCCTACTTGTCTCAACAACCCAACTGGCATTTCAATCCCAACAACCACCACAGGGCCCCCAAATCCAGCCAATTTGAATCATCCGTCACCTACCGATTCATCTAAGAAGCGAAAGGCGTCCCCGGAACAGCAACACATTGATCGGAAGAACCACCACGGCCGTCCGATCAATCCTGCCGTCCCGGGGAACCAATCAGGTGAAGAGGTAGTAGTGGTGCCAGTTAAGAAATCAAATGGGAACAAAAAAGGGACAGCCAAGGGTACGGGGAATAACTGTAATAACGGTAATAGCAAGGAAGGGAGGTGGGCAGAGCAGTTGCTAAACCCTTGTGCCTCAGCCATCACAGGTGGGAATTCGACACGTGTCCAGCACCTCCTCTTCGTTCTCCACGAGCTTGCCTCAGTCACCGGCGACGCCAACCACCGCTTGGCAGCTCACGGGCTCCATGCGCTGAATCAGCACCTGTCCTCCTCCTCCTCCTCCTCTGCCCCTAACGGCTCTGCCTCAGCGGCGCCGGTTACTTTCACTTCCACAGAACCAAGATTTTTCCAAAAATCTCTGATGAAATTCTATGAGGTGAGTCCATGGTTTGCATTTCCAAATAACATTGCGAACTCTTCAATTCTCCAACTTATTGCGGAAGAATTTGATCGAACTCGAACCCTTCACATTGTCGATGTCGGTGTGTCTCATGGTATGCAATGGCCTACTCTGCTCGAGGCCCTGACTCACCGGCCAGGCGGCCCTCCGCCATTGGTCAAGATCACAGTTATTGCCGGCGCTGAAAACAACCAAAACAGAGGGACCCCATTTGCAGTAGGTCCTCCCGGTGAAAATTTCTCCAATAGACTCCTCAGTTTCGCCAAGTACATGAACATCAATTTGCAAATTAAGCGCCTCGACGATCAGCCATTGAAAACTCTGAATGCTCAACTGATCGATGCCTCCAATGACGAAACACTGATCGTTTGCGTGCAATTCAGGCTACACCAACTGAACCACAACGCCCCGGATGAGAGAACCGAGTTCTTGAAGTCCCTGAGGAGCATGGAGCCAAAGGGGGTGATCCTAAGCGAGAACAACATGGAGTGCAGCTGCAACAACTGCGGGGATTTTGCGACGGGGTTTTCGAGGCAGGTGGAGTACTTGTGGAGGTTCTTGGACTCGACCAGCGCGGCGTTCAAAGGGCGGGAGAGCGAGGAGAGGAGGGTGATGGAAGGGGAGGCAGCGAAGGCACTGACGAACCGGGGGGAGATGAATGAGGGGAAGGAGAAGTGGGGTGAGAGGATGAGAAGGGTAGGGTTTGTGGGGGAGGTGTTTGGGGAGGATGCCATTGATGGAGGAAGAGCCTTGCTGAGGAAGTATGATAGTAATTGGGAGATGAAAGTGGATGAGAAGGATGGGTGTGTAGGGTTGTGGTGGAAGGGGCAGCCTGTTTCTTTTTGTTCATTGTGGAAGCCTCATGAGAGAGAAGGCAACAATTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0008150 GO:0009889 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0022603 GO:0031323 GO:0031326 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0044424 GO:0044464 GO:0048831 GO:0050789 GO:0050793 GO:0050794 GO:0051171 GO:0051239 GO:0051252 GO:0060255 GO:0060688 GO:0065007 GO:0080090 GO:0097159 GO:0140110 GO:1900618 GO:1901363 GO:1903506 GO:1905428 GO:2000026 GO:2000032 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

GRAS

Protein Analysis

553

Amino Acids

61.15

Weight (kDa)

6.07

Isoelectric Point (pI)

40.73

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
GRAS	PF03514	162 - 544	3e-82	GRAS domain family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0015443)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G13840
fragaria_vesca	FvH4_2g04140
malus_domestica	MD09G1183000.v1.1
prunus_persica	Prupe.3G040400_v2.0.a1
pyrus_communis	pycom09g10030
rosa_chinensis	RchiOBHm_Chr2g0145631
rosa_laevigata	RLG00000020155
rosa_multiflora	Rmu_sc0003046.1_g000006
rosa_roxburghii	Rroxscaffold_152G00434650 Rroxscaffold_2G00100590
rosa_rugosa	Rorug02G0392400
rosa_samantha	Rh2AG446700 Rh2BG458400 Rh2CG433400 Rh2DG468000
rosa_wichuraiana	Rw2G036480

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1300
Acc36I	ACCTGC	1 cut(s)	1300
AccB1I	GGYRCC	2 cut(s)	388, 685
AccB7I	CCANNNNNTGG	1 cut(s)	601
AccII	CGCG	1 cut(s)	1349
AciI	CCGC	8 cut(s)	598, 683, 812, 915, 923, 1281, 1349, 1363
AclWI	GGATC	2 cut(s)	89, 1234
AcoI	YGGCCR	2 cut(s)	331, 908
AcsI	RAATTY	4 cut(s)	526, 740, 818, 1009
AcvI	CACGTG	1 cut(s)	536
AcyI	GRCGYC	3 cut(s)	290, 588, 686
AfaI	GTAC	3 cut(s)	436, 1043, 1319
AfiI	CCNNNNNNNGG	4 cut(s)	225, 357, 601, 1530
AflIII	ACRYGT	2 cut(s)	533, 535
AgsI	TTSAA	9 cut(s)	59, 108, 131, 207, 250, 795, 1090, 1207, 1357
AjnI	CCWGG	1 cut(s)	910
AjuI	GAANNNNNNNTTGG	2 cut(s)	187, 219
AluBI	AGCT	3 cut(s)	568, 608, 1269
AluI	AGCT	3 cut(s)	568, 608, 1269
Alw26I	GTCTC	2 cut(s)	188, 867
AlwI	GGATC	2 cut(s)	89, 1234
AlwNI	CAGNNNCTG	1 cut(s)	637
Ama87I	CYCGRG	2 cut(s)	355, 890
AoxI	GGCC	6 cut(s)	227, 331, 878, 894, 908, 916
ApaI	GGGCCC	1 cut(s)	231
ApeKI	GCWGC	5 cut(s)	605, 1266, 1269, 1400, 1603
ApoI	RAATTY	4 cut(s)	526, 740, 818, 1009
ArsI	GACNNNNNNTTYG	2 cut(s)	1285, 1317
AspLEI	GCGC	5 cut(s)	625, 688, 956, 1071, 1349
AspS9I	GGNCC	6 cut(s)	227, 228, 895, 917, 978, 995
AsuC2I	CCSGG	6 cut(s)	296, 356, 357, 1002, 1184, 1421
AsuHPI	GGTGA	9 cut(s)	252, 383, 571, 763, 896, 1016, 1249, 1396, 1466
AvaI	CYCGRG	2 cut(s)	355, 890
AvaII	GGWCC	2 cut(s)	978, 995
AxyI	CCTNAGG	1 cut(s)	1214
BaeGI	GKGCMC	1 cut(s)	231
BanI	GGYRCC	2 cut(s)	388, 685
BanII	GRGCYC	2 cut(s)	231, 618
BauI	CACGAG	1 cut(s)	563
BbrPI	CACGTG	1 cut(s)	536
BbvCI	CCTCAGC	3 cut(s)	508, 679, 1529
BbvI	GCAGC	5 cut(s)	617, 1256, 1278, 1412, 1615
BccI	CCATC	6 cut(s)	88, 113, 521, 1381, 1505, 1568
BceAI	ACGGC	4 cut(s)	318, 335, 346, 685
BciT130I	CCWGG	1 cut(s)	912
BcnI	CCSGG	6 cut(s)	296, 356, 357, 1002, 1184, 1421
BcoDI	GTCTC	2 cut(s)	188, 867
BfoI	RGCGCY	3 cut(s)	689, 957, 1072
BfuAI	ACCTGC	1 cut(s)	1300
BglI	GCCNNNNNGGC	1 cut(s)	683
BisI	GCNGC	8 cut(s)	606, 684, 916, 1267, 1270, 1350, 1401, 1604
BlsI	GCNGC	8 cut(s)	607, 685, 917, 1268, 1271, 1351, 1402, 1605
BmcAI	AGTACT	1 cut(s)	1319
Bme1390I	CCNGG	7 cut(s)	296, 356, 357, 912, 1002, 1184, 1421
Bme18I	GGWCC	2 cut(s)	978, 995
BmeT110I	CYCGRG	2 cut(s)	355, 890
BmgT120I	GGNCC	6 cut(s)	227, 228, 895, 917, 978, 995
BmiI	GGNNCC	9 cut(s)	229, 230, 362, 390, 617, 687, 979, 980, 1227
BmrFI	CCNGG	7 cut(s)	296, 356, 357, 912, 1002, 1184, 1421
BmsI	GCATC	2 cut(s)	1105, 1492
BoxI	GACNNNNGTC	1 cut(s)	536
BplI	GAGNNNNNCTC	4 cut(s)	11, 43, 557, 589
Bpu10I	CCTNAGC	4 cut(s)	508, 679, 1244, 1529
BpuMI	CCSGG	6 cut(s)	296, 356, 357, 1002, 1184, 1421
Bsa29I	ATCGAT	2 cut(s)	117, 1113
BsaAI	YACGTR	1 cut(s)	536
BsaHI	GRCGYC	3 cut(s)	290, 588, 686
BsaJI	CCNNGG	8 cut(s)	294, 328, 355, 356, 429, 758, 1182, 1420
BsaXI	ACNNNNNCTCC	4 cut(s)	626, 656, 1307, 1337
Bsc4I	CCNNNNNNNGG	4 cut(s)	225, 357, 601, 1530
Bse118I	RCCGGY	4 cut(s)	581, 688, 906, 950
Bse1I	ACTGG	2 cut(s)	202, 392
Bse21I	CCTNAGG	1 cut(s)	1214
Bse3DI	GCAATG	2 cut(s)	780, 881
BseBI	CCWGG	1 cut(s)	912
BseCI	ATCGAT	2 cut(s)	117, 1113
BseDI	CCNNGG	8 cut(s)	294, 328, 355, 356, 429, 758, 1182, 1420
BseGI	GGATG	9 cut(s)	97, 145, 160, 253, 1192, 1467, 1507, 1570, 1579
BseLI	CCNNNNNNNGG	4 cut(s)	225, 357, 601, 1530
BseMI	GCAATG	2 cut(s)	780, 881
BseMII	CTCAG	7 cut(s)	48, 522, 588, 693, 1042, 1205, 1520
BseNI	ACTGG	2 cut(s)	202, 392
BseSI	GKGCMC	1 cut(s)	231
BseX3I	CGGCCG	1 cut(s)	331
BseXI	GCAGC	5 cut(s)	617, 1256, 1278, 1412, 1615
BsgI	GTGCAG	1 cut(s)	1285
Bsh1236I	CGCG	1 cut(s)	1349
Bsh1285I	CGRYCG	1 cut(s)	334
BshFI	GGCC	6 cut(s)	229, 333, 880, 896, 910, 918
BshNI	GGYRCC	2 cut(s)	388, 685
BshVI	ATCGAT	2 cut(s)	117, 1113
BsiEI	CGRYCG	1 cut(s)	334
BsiHKCI	CYCGRG	2 cut(s)	355, 890
BsiSI	CCGG	9 cut(s)	296, 356, 582, 689, 907, 951, 1002, 1184, 1420
BslFI	GGGAC	5 cut(s)	277, 338, 436, 991, 1195
BslI	CCNNNNNNNGG	4 cut(s)	225, 357, 601, 1530
BsmAI	GTCTC	2 cut(s)	188, 867
BsmFI	GGGAC	5 cut(s)	277, 338, 436, 991, 1195
BsmI	GAATGC	1 cut(s)	1105
BsnI	GGCC	6 cut(s)	229, 333, 880, 896, 910, 918
BsoBI	CYCGRG	2 cut(s)	355, 890
Bsp120I	GGGCCC	1 cut(s)	227
Bsp1286I	GDGCHC	2 cut(s)	231, 618
Bsp19I	CCATGG	1 cut(s)	758
BspACI	CCGC	8 cut(s)	598, 683, 812, 915, 923, 1281, 1349, 1363
BspANI	GGCC	6 cut(s)	229, 333, 880, 896, 910, 918
BspCNI	CTCAG	7 cut(s)	47, 521, 587, 692, 1041, 1206, 1521
BspDI	ATCGAT	2 cut(s)	117, 1113
BspFNI	CGCG	1 cut(s)	1349
BspHI	TCATGA	1 cut(s)	1636
BspLI	GGNNCC	9 cut(s)	229, 230, 362, 390, 617, 687, 979, 980, 1227
BspMI	ACCTGC	1 cut(s)	1300
BspPI	GGATC	2 cut(s)	89, 1234
BspQI	GCTCTTC	1 cut(s)	1513
BspT107I	GGYRCC	2 cut(s)	388, 685
BsrDI	GCAATG	2 cut(s)	780, 881
BsrFI	RCCGGY	4 cut(s)	581, 688, 906, 950
BsrI	ACTGG	2 cut(s)	202, 392
BssAI	RCCGGY	4 cut(s)	581, 688, 906, 950
BssECI	CCNNGG	8 cut(s)	294, 328, 355, 356, 429, 758, 1182, 1420
BssNI	GRCGYC	3 cut(s)	290, 588, 686
BssSI	CACGAG	1 cut(s)	563
BssT1I	CCWWGG	2 cut(s)	429, 758
Bst2BI	CACGAG	1 cut(s)	563
Bst2UI	CCWGG	1 cut(s)	912
Bst4CI	ACNGT	3 cut(s)	449, 458, 943
Bst6I	CTCTTC	4 cut(s)	369, 557, 796, 1513
BstACI	GRCGYC	3 cut(s)	290, 588, 686
BstAPI	GCANNNNNTGC	1 cut(s)	1278
BstBAI	YACGTR	1 cut(s)	536
BstC8I	GCNNGC	3 cut(s)	570, 952, 1148
BstDEI	CTNAG	9 cut(s)	34, 276, 508, 574, 679, 1028, 1214, 1244, 1529
BstDSI	CCRYGG	2 cut(s)	328, 758
BstENI	CCTNNNNNAGG	1 cut(s)	1528
BstF5I	GGATG	9 cut(s)	97, 145, 160, 253, 1192, 1467, 1507, 1570, 1579
BstFNI	CGCG	1 cut(s)	1349
BstH2I	RGCGCY	3 cut(s)	689, 957, 1072
BstHHI	GCGC	5 cut(s)	625, 688, 956, 1071, 1349
BstMAI	GTCTC	2 cut(s)	188, 867
BstMCI	CGRYCG	1 cut(s)	334
BstMWI	GCNNNNNNNGC	8 cut(s)	622, 631, 683, 886, 1066, 1156, 1278, 1406
BstNI	CCWGG	1 cut(s)	912
BstPAI	GACNNNNGTC	1 cut(s)	536
BstSCI	CCNGG	7 cut(s)	294, 354, 355, 910, 1000, 1182, 1419
BstSLI	GKGCMC	1 cut(s)	231
BstUI	CGCG	1 cut(s)	1349
BstV1I	GCAGC	5 cut(s)	617, 1256, 1278, 1412, 1615
BstXI	CCANNNNNNTGG	1 cut(s)	87
BstZI	CGGCCG	1 cut(s)	331
Bsu15I	ATCGAT	2 cut(s)	117, 1113
Bsu36I	CCTNAGG	1 cut(s)	1214
BsuRI	GGCC	6 cut(s)	229, 333, 880, 896, 910, 918
BsuTUI	ATCGAT	2 cut(s)	117, 1113
BtgI	CCRYGG	2 cut(s)	328, 758
BtsCI	GGATG	9 cut(s)	97, 145, 160, 253, 1192, 1467, 1507, 1570, 1579
BtsIMutI	CAGTG	3 cut(s)	6, 1133, 1409
BveI	ACCTGC	1 cut(s)	1300
Cac8I	GCNNGC	3 cut(s)	570, 952, 1148
CaiI	CAGNNNCTG	1 cut(s)	637
CciI	TCATGA	1 cut(s)	1636
CfoI	GCGC	5 cut(s)	625, 688, 956, 1071, 1349
Cfr10I	RCCGGY	4 cut(s)	581, 688, 906, 950
Cfr13I	GGNCC	6 cut(s)	227, 228, 895, 917, 978, 995
Cfr9I	CCCGGG	1 cut(s)	355
ClaI	ATCGAT	2 cut(s)	117, 1113
CseI	GACGC	2 cut(s)	279, 596
Csp6I	GTAC	3 cut(s)	435, 1042, 1318
CviAII	CATG	8 cut(s)	149, 620, 759, 866, 1045, 1222, 1258, 1637
CviQI	GTAC	3 cut(s)	435, 1042, 1318
DdeI	CTNAG	9 cut(s)	34, 276, 508, 574, 679, 1028, 1214, 1244, 1529
DinI	GGCGCC	1 cut(s)	687
EaeI	YGGCCR	2 cut(s)	331, 908
EagI	CGGCCG	1 cut(s)	331
Eam1104I	CTCTTC	4 cut(s)	369, 557, 796, 1513
EarI	CTCTTC	4 cut(s)	369, 557, 796, 1513
EciI	GGCGGA	1 cut(s)	912
EclXI	CGGCCG	1 cut(s)	331
Eco130I	CCWWGG	2 cut(s)	429, 758
Eco24I	GRGCYC	2 cut(s)	231, 618
Eco47I	GGWCC	2 cut(s)	978, 995
Eco52I	CGGCCG	1 cut(s)	331
Eco72I	CACGTG	1 cut(s)	536
Eco81I	CCTNAGG	1 cut(s)	1214
Eco88I	CYCGRG	2 cut(s)	355, 890
EcoNI	CCTNNNNNAGG	1 cut(s)	1528
EcoO109I	RGGNCCY	5 cut(s)	227, 228, 895, 978, 995
EcoRI	GAATTC	1 cut(s)	526
EcoRII	CCWGG	1 cut(s)	910
EcoT14I	CCWWGG	2 cut(s)	429, 758
EcoT38I	GRGCYC	2 cut(s)	231, 618
EgeI	GGCGCC	1 cut(s)	687
EheI	GGCGCC	1 cut(s)	687
ErhI	CCWWGG	2 cut(s)	429, 758
FaeI	CATG	8 cut(s)	152, 623, 762, 869, 1048, 1225, 1261, 1640
FaqI	GGGAC	5 cut(s)	277, 338, 436, 991, 1195
FatI	CATG	8 cut(s)	148, 619, 758, 865, 1044, 1221, 1257, 1636
FauI	CCCGC	2 cut(s)	1274, 1356
Fnu4HI	GCNGC	8 cut(s)	606, 684, 916, 1267, 1270, 1350, 1401, 1604
FokI	GGATG	9 cut(s)	104, 147, 152, 240, 1199, 1474, 1514, 1577, 1586
FriOI	GRGCYC	2 cut(s)	231, 618
Fsp4HI	GCNGC	8 cut(s)	606, 684, 916, 1267, 1270, 1350, 1401, 1604
GlaI	GCGC	5 cut(s)	624, 687, 955, 1070, 1348
GluI	GCNGC	8 cut(s)	606, 684, 916, 1267, 1270, 1350, 1401, 1604
HaeII	RGCGCY	3 cut(s)	689, 957, 1072
HaeIII	GGCC	6 cut(s)	229, 333, 880, 896, 910, 918
HapII	CCGG	9 cut(s)	296, 356, 582, 689, 907, 951, 1002, 1184, 1420
HgaI	GACGC	2 cut(s)	279, 596
HhaI	GCGC	5 cut(s)	625, 688, 956, 1071, 1349
Hin1I	GRCGYC	3 cut(s)	290, 588, 686
Hin1II	CATG	8 cut(s)	152, 623, 762, 869, 1048, 1225, 1261, 1640
Hin6I	GCGC	5 cut(s)	623, 686, 954, 1069, 1347
HinP1I	GCGC	5 cut(s)	623, 686, 954, 1069, 1347
HinfI	GANTC	8 cut(s)	62, 250, 269, 628, 754, 901, 1023, 1337
HpaII	CCGG	9 cut(s)	296, 356, 582, 689, 907, 951, 1002, 1184, 1420
HphI	GGTGA	9 cut(s)	252, 383, 571, 763, 896, 1016, 1249, 1396, 1466
Hpy188I	TCNGA	5 cut(s)	37, 318, 339, 735, 1098
Hpy188III	TCNNGA	3 cut(s)	934, 1204, 1637
Hpy99I	CGWCG	3 cut(s)	590, 1079, 1297
HpyAV	CCTTC	9 cut(s)	464, 848, 1385, 1399, 1435, 1461, 1564, 1591, 1640
HpyCH4III	ACNGT	3 cut(s)	449, 458, 943
HpyCH4IV	ACGT	1 cut(s)	535
HpyCH4V	TGCA	7 cut(s)	767, 874, 989, 1060, 1150, 1266, 1272
HpyF10VI	GCNNNNNNNGC	8 cut(s)	622, 631, 683, 886, 1066, 1156, 1278, 1406
HpyF3I	CTNAG	9 cut(s)	34, 276, 508, 574, 679, 1028, 1214, 1244, 1529
HpySE526I	ACGT	1 cut(s)	535
Hsp92I	GRCGYC	3 cut(s)	290, 588, 686
Hsp92II	CATG	8 cut(s)	152, 623, 762, 869, 1048, 1225, 1261, 1640
HspAI	GCGC	5 cut(s)	623, 686, 954, 1069, 1347
KasI	GGCGCC	1 cut(s)	685
KflI	GGGWCCC	1 cut(s)	978
KroI	GCCGGC	1 cut(s)	950
KroNI	GCCGGC	1 cut(s)	952
LguI	GCTCTTC	1 cut(s)	1513
LmnI	GCTCC	3 cut(s)	621, 1218, 1225
Lsp1109I	GCAGC	5 cut(s)	617, 1256, 1278, 1412, 1615
LweI	GCATC	2 cut(s)	1105, 1492
MaeII	ACGT	1 cut(s)	535
MaeIII	GTNAC	4 cut(s)	67, 258, 577, 691
MboII	GAAGA	8 cut(s)	67, 71, 331, 386, 544, 783, 827, 1530
MhlI	GDGCHC	2 cut(s)	231, 618
Mly113I	GGCGCC	1 cut(s)	686
MlyI	GAGTC	4 cut(s)	763, 895, 1017, 1331
MmeI	TCCRAC	1 cut(s)	826
MroNI	GCCGGC	1 cut(s)	950
MseI	TTAA	3 cut(s)	396, 1065, 1657
MslI	CAYNNNNRTG	1 cut(s)	108
MspA1I	CMGCKG	2 cut(s)	683, 1269
MspI	CCGG	9 cut(s)	296, 356, 582, 689, 907, 951, 1002, 1184, 1420
MspR9I	CCNGG	7 cut(s)	296, 356, 357, 912, 1002, 1184, 1421
Mva1269I	GAATGC	1 cut(s)	1105
MvaI	CCWGG	1 cut(s)	912
MvnI	CGCG	1 cut(s)	1349
MwoI	GCNNNNNNNGC	8 cut(s)	622, 631, 683, 886, 1066, 1156, 1278, 1406
NaeI	GCCGGC	1 cut(s)	952
NarI	GGCGCC	1 cut(s)	686
NciI	CCSGG	6 cut(s)	296, 356, 357, 1002, 1184, 1421
NcoI	CCATGG	1 cut(s)	758
NgoMIV	GCCGGC	1 cut(s)	950
NlaIII	CATG	8 cut(s)	152, 623, 762, 869, 1048, 1225, 1261, 1640
NlaIV	GGNNCC	9 cut(s)	229, 230, 362, 390, 617, 687, 979, 980, 1227
NmuCI	GTSAC	3 cut(s)	67, 258, 577
PaeR7I	CTCGAG	1 cut(s)	890
PagI	TCATGA	1 cut(s)	1636
PaqCI	CACCTGC	1 cut(s)	1300
PciSI	GCTCTTC	1 cut(s)	1513
PcsI	WCGNNNNNNNCGW	2 cut(s)	561, 1301
PctI	GAATGC	1 cut(s)	1105
PdiI	GCCGGC	1 cut(s)	952
PfeI	GAWTC	4 cut(s)	62, 250, 269, 628
PflMI	CCANNNNNTGG	1 cut(s)	601
PkrI	GCNGC	8 cut(s)	607, 685, 917, 1268, 1271, 1351, 1402, 1605
PleI	GAGTC	4 cut(s)	762, 895, 1017, 1331
PluTI	GGCGCC	1 cut(s)	689
PmaCI	CACGTG	1 cut(s)	536
PmlI	CACGTG	1 cut(s)	536
PpsI	GAGTC	4 cut(s)	762, 895, 1017, 1331
Ppu21I	YACGTR	1 cut(s)	536
PpuMI	RGGWCCY	2 cut(s)	978, 995
PshAI	GACNNNNGTC	1 cut(s)	536
Psp5II	RGGWCCY	2 cut(s)	978, 995
Psp6I	CCWGG	1 cut(s)	910
PspCI	CACGTG	1 cut(s)	536
PspGI	CCWGG	1 cut(s)	910
PspN4I	GGNNCC	9 cut(s)	229, 230, 362, 390, 617, 687, 979, 980, 1227
PspOMI	GGGCCC	1 cut(s)	227
PspPI	GGNCC	6 cut(s)	227, 228, 895, 917, 978, 995
PspPPI	RGGWCCY	2 cut(s)	978, 995
PspXI	VCTCGAGB	1 cut(s)	890
PstNI	CAGNNNCTG	1 cut(s)	637
PvuII	CAGCTG	1 cut(s)	1269
RsaI	GTAC	3 cut(s)	436, 1043, 1319
RsaNI	GTAC	3 cut(s)	435, 1042, 1318
RseI	CAYNNNNRTG	1 cut(s)	108
SapI	GCTCTTC	1 cut(s)	1513
SaqAI	TTAA	3 cut(s)	396, 1065, 1657
SatI	GCNGC	8 cut(s)	606, 684, 916, 1267, 1270, 1350, 1401, 1604
Sau96I	GGNCC	6 cut(s)	227, 228, 895, 917, 978, 995
ScaI	AGTACT	1 cut(s)	1319
SchI	GAGTC	4 cut(s)	763, 895, 1017, 1331
ScrFI	CCNGG	7 cut(s)	296, 356, 357, 912, 1002, 1184, 1421
SduI	GDGCHC	2 cut(s)	231, 618
SfaNI	GCATC	2 cut(s)	1105, 1492
SfoI	GGCGCC	1 cut(s)	687
Sfr274I	CTCGAG	1 cut(s)	890
SgrAI	CRCCGGYG	1 cut(s)	581
SinI	GGWCC	2 cut(s)	978, 995
SlaI	CTCGAG	1 cut(s)	890
SmaI	CCCGGG	1 cut(s)	357
SmiMI	CAYNNNNRTG	1 cut(s)	108
SmlI	CTYRAG	1 cut(s)	890
SmoI	CTYRAG	1 cut(s)	890
SsiI	CCGC	8 cut(s)	598, 683, 812, 915, 923, 1281, 1349, 1363
SspDI	GGCGCC	1 cut(s)	685
StyD4I	CCNGG	7 cut(s)	294, 354, 355, 910, 1000, 1182, 1419
StyI	CCWWGG	2 cut(s)	429, 758
TaaI	ACNGT	3 cut(s)	449, 458, 943
TaiI	ACGT	1 cut(s)	538
TatI	WGTACW	2 cut(s)	1041, 1317
TauI	GCSGC	3 cut(s)	686, 918, 1352
TfiI	GAWTC	4 cut(s)	62, 250, 269, 628
Tru1I	TTAA	3 cut(s)	396, 1065, 1657
Tru9I	TTAA	3 cut(s)	396, 1065, 1657
TscAI	CASTG	3 cut(s)	13, 1140, 1416
TseFI	GTSAC	3 cut(s)	67, 258, 577
TseI	GCWGC	5 cut(s)	605, 1266, 1269, 1400, 1603
Tsp45I	GTSAC	3 cut(s)	67, 258, 577
TspDTI	ATGAA	7 cut(s)	149, 261, 752, 1061, 1445, 1571, 1611
TspGWI	ACGGA	1 cut(s)	246
TspMI	CCCGGG	1 cut(s)	355
TspRI	CASTG	3 cut(s)	13, 1140, 1416
Van91I	CCANNNNNTGG	1 cut(s)	601
VpaK11BI	GGWCC	2 cut(s)	978, 995
XagI	CCTNNNNNAGG	1 cut(s)	1528
XapI	RAATTY	4 cut(s)	526, 740, 818, 1009
XcmI	CCANNNNNNNNNTGG	1 cut(s)	598
XhoI	CTCGAG	1 cut(s)	890
XmaI	CCCGGG	1 cut(s)	355
ZrmI	AGTACT	1 cut(s)	1319

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.