Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr9

Orthogroup ID

OG0015443

Physical Location & Seq

Genomic Coordinates Reverse (-)

8092994 .. 8094649

Gene Structure 1656 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom09g10030.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1656 bp

ATGACCACTGAACAACCAGAGCCAAACTCCACCTCAGATCATATCTTGGATTGGCTTGAAGATTCAGTCACTTTCTTCCCATCTTTCTGGGATGATCCTTACCATTCAAATGACATCGATGGAGGACTTCAATGGTGGGATGAGAACCATGATCTTGTTCATCCCACCACAAATCCTACTTGTCTCAACAACCCAACTGGCATTTCAATCCCAACAACCACCACAGGCCCCCCAAATCCTGCCAATTTGAATCATCAGTCACCTACCGATTCATCTAAGAAGCGAAAGGCGTCCCCGGAAGAGCAACACATTGATCGGAAGAACCACCACGGCCGTCCGATCAATCCTGCCGTCCCGGGGAACCAATCAGGTGAAGAGGTAGTAGTGGTGCCAGTTAAGAAATCAAATGGGAACAAAAAAGGGACAGCCAAGGGTACGGGGAATAACTGTAATAACGGTAATAGCAAGGAAGGGAGGTGGGCAGAGCAGTTGCTAAACCCTTGTGCCTCAGCCATCACAGGTGGGAATTCGACACGTGTCCAGCACCTCCTCTTCGTTCTCCACGAGCTTGCCTCAGTCACCGGCGACGCCAACCACCGCTTGGCAGCTCACGGGCTCCATGCGCTGAATCAGCACCTGTCCTCCTCCTCCTCCTCTGCCCCTAACGGCTCTGCCTCAGCGGCGCCGGTTACTTTCACTTCCACAGAACCAAGATTTTTCCAAAAATCTCTGATGAAATTCTATGAGGTGAGTCCATGGTTTGCATTTCCAAATAACATTGCGAACTCTTCAATTCTCCAACTTATTGCGGAAGAATTTGATCGAACTCGAACCCTTCACATTGTCGATGTCGGTGTGTCTCATGGTATGCAATGGCCTACTCTGCTCGAGGCCCTGACTCACCGGCCAGGCGGCCCTCCGCCATTGGTCAAGATCACAGTTATCGCCGGCGCTGAAAACAACCAAAACAGAGGGACCCCATTTGCAGTAGGTCCTCCCGGTGACAATTTCTCCAATAGACTCCTCAGTTTCGCCAAGTACATGAACATCAATTTGCAAATTAAGCGCCTCGACGATCAGCCATTGAAAACTCTGAATGCTCAACTGATCGACGCCTCCAATGACGAAACACTGATCGTTTGCGTGCAATTCAGGCTACACCAACTGAACCACAACACCCCGGATGAGAGAACCGAGTTCTTGAAGTCCCTGAGGAGCATGGAGCCCAAGGGGGTGATCCTAAGCGAGAACAACATGGAGTGCAGCTGCAACAACTGCGGGGATTTTGCGACGGGGTTTTCGAGGCAGGTGGAATACTTGTGGAGGTTCTTGGACTCGACCAGCGTGGCATTCAAAGGGCGGGAGAGCGAGGAGAGGAGGGTGATGGAAGGGGAGGCGGCGAAGGCACTGACGAACCGTGGGGAGATGAATGAGGGGAAGGAGAAGTGGGGTGAGAGGATGAGAAGGGTAGGGTTTGTGGGGGAGGTGTTTGGGGAGGATGCCATTGATGGAGGAAGAGCCTTGCTGAGGAAGTATGATAGTAATTGGGAGATGAAGGTGGATGAGAAGGATGGGTGTGTAGGGTTGTGGTGGAAGGGGCAGCCTGTATCTTTTTGTTCATTGTGGAAGCCTCATGAGAGAGAAGGCAACAATTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0008150 GO:0009889 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0022603 GO:0031323 GO:0031326 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0044424 GO:0044464 GO:0048831 GO:0050789 GO:0050793 GO:0050794 GO:0051171 GO:0051239 GO:0051252 GO:0060255 GO:0060688 GO:0065007 GO:0080090 GO:0097159 GO:0140110 GO:1900618 GO:1901363 GO:1903506 GO:1905428 GO:2000026 GO:2000032 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

GRAS

Protein Analysis

552

Amino Acids

61.16

Weight (kDa)

6.0

Isoelectric Point (pI)

40.46

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
GRAS	PF03514	162 - 543	5.3e-82	GRAS domain family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0015443)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G13840
fragaria_vesca	FvH4_2g04140
malus_domestica	MD09G1183000.v1.1
prunus_persica	Prupe.3G040400_v2.0.a1
pyrus_communis	pycom09g10030
rosa_chinensis	RchiOBHm_Chr2g0145631
rosa_laevigata	RLG00000020155
rosa_multiflora	Rmu_sc0003046.1_g000006
rosa_roxburghii	Rroxscaffold_152G00434650 Rroxscaffold_2G00100590
rosa_rugosa	Rorug02G0392400
rosa_samantha	Rh2AG446700 Rh2BG458400 Rh2CG433400 Rh2DG468000
rosa_wichuraiana	Rw2G036480

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1297
Acc36I	ACCTGC	1 cut(s)	1297
AccB1I	GGYRCC	2 cut(s)	388, 682
AccB7I	CCANNNNNTGG	1 cut(s)	601
AciI	CCGC	8 cut(s)	598, 680, 809, 912, 920, 1278, 1360, 1397
AclWI	GGATC	2 cut(s)	89, 1231
AcoI	YGGCCR	2 cut(s)	331, 905
AcsI	RAATTY	3 cut(s)	526, 737, 815
AcvI	CACGTG	1 cut(s)	536
AcyI	GRCGYC	4 cut(s)	290, 588, 683, 1113
AfaI	GTAC	2 cut(s)	436, 1040
AfiI	CCNNNNNNNGG	3 cut(s)	357, 601, 1527
AflIII	ACRYGT	2 cut(s)	533, 535
AgsI	TTSAA	9 cut(s)	59, 108, 131, 207, 250, 792, 1087, 1204, 1354
AjnI	CCWGG	1 cut(s)	907
AjuI	GAANNNNNNNTTGG	2 cut(s)	187, 219
AluBI	AGCT	3 cut(s)	568, 608, 1266
AluI	AGCT	3 cut(s)	568, 608, 1266
Alw26I	GTCTC	2 cut(s)	188, 864
AlwI	GGATC	2 cut(s)	89, 1231
AlwNI	CAGNNNCTG	1 cut(s)	637
Ama87I	CYCGRG	2 cut(s)	355, 887
AoxI	GGCC	6 cut(s)	226, 331, 875, 891, 905, 913
ApeKI	GCWGC	4 cut(s)	605, 1263, 1266, 1600
ApoI	RAATTY	3 cut(s)	526, 737, 815
ArsI	GACNNNNNNTTYG	2 cut(s)	1282, 1314
AspLEI	GCGC	4 cut(s)	625, 685, 953, 1068
AspS9I	GGNCC	5 cut(s)	227, 892, 914, 975, 992
AsuC2I	CCSGG	5 cut(s)	296, 356, 357, 999, 1181
AsuHPI	GGTGA	9 cut(s)	252, 383, 571, 760, 893, 1013, 1246, 1393, 1463
AvaI	CYCGRG	2 cut(s)	355, 887
AvaII	GGWCC	2 cut(s)	975, 992
AxyI	CCTNAGG	1 cut(s)	1211
BanI	GGYRCC	2 cut(s)	388, 682
BanII	GRGCYC	2 cut(s)	618, 1227
BauI	CACGAG	1 cut(s)	563
BbrPI	CACGTG	1 cut(s)	536
BbvCI	CCTCAGC	3 cut(s)	508, 676, 1526
BbvI	GCAGC	4 cut(s)	617, 1253, 1275, 1612
BccI	CCATC	6 cut(s)	88, 113, 521, 1378, 1502, 1565
BceAI	ACGGC	4 cut(s)	318, 335, 346, 682
BciT130I	CCWGG	1 cut(s)	909
BcnI	CCSGG	5 cut(s)	296, 356, 357, 999, 1181
BcoDI	GTCTC	2 cut(s)	188, 864
BfoI	RGCGCY	3 cut(s)	686, 954, 1069
BfuAI	ACCTGC	1 cut(s)	1297
BglI	GCCNNNNNGGC	1 cut(s)	680
BisI	GCNGC	7 cut(s)	606, 681, 913, 1264, 1267, 1398, 1601
BlsI	GCNGC	7 cut(s)	607, 682, 914, 1265, 1268, 1399, 1602
Bme1390I	CCNGG	6 cut(s)	296, 356, 357, 909, 999, 1181
Bme18I	GGWCC	2 cut(s)	975, 992
BmeT110I	CYCGRG	2 cut(s)	355, 887
BmgT120I	GGNCC	5 cut(s)	227, 892, 914, 975, 992
BmiI	GGNNCC	8 cut(s)	229, 362, 390, 617, 684, 976, 977, 1224
BmrFI	CCNGG	6 cut(s)	296, 356, 357, 909, 999, 1181
BmsI	GCATC	1 cut(s)	1489
BoxI	GACNNNNGTC	1 cut(s)	536
BplI	GAGNNNNNCTC	4 cut(s)	11, 43, 557, 589
Bpu10I	CCTNAGC	4 cut(s)	508, 676, 1241, 1526
BpuMI	CCSGG	5 cut(s)	296, 356, 357, 999, 1181
Bsa29I	ATCGAT	1 cut(s)	117
BsaAI	YACGTR	1 cut(s)	536
BsaHI	GRCGYC	4 cut(s)	290, 588, 683, 1113
BsaJI	CCNNGG	9 cut(s)	294, 328, 355, 356, 429, 755, 1179, 1227, 1417
BsaXI	ACNNNNNCTCC	4 cut(s)	626, 656, 995, 1025
Bsc4I	CCNNNNNNNGG	3 cut(s)	357, 601, 1527
Bse118I	RCCGGY	4 cut(s)	581, 685, 903, 947
Bse1I	ACTGG	2 cut(s)	202, 392
Bse21I	CCTNAGG	1 cut(s)	1211
Bse3DI	GCAATG	2 cut(s)	777, 878
BseBI	CCWGG	1 cut(s)	909
BseCI	ATCGAT	1 cut(s)	117
BseDI	CCNNGG	9 cut(s)	294, 328, 355, 356, 429, 755, 1179, 1227, 1417
BseGI	GGATG	8 cut(s)	97, 145, 160, 1189, 1464, 1504, 1567, 1576
BseLI	CCNNNNNNNGG	3 cut(s)	357, 601, 1527
BseMI	GCAATG	2 cut(s)	777, 878
BseMII	CTCAG	7 cut(s)	48, 522, 588, 690, 1039, 1202, 1517
BseNI	ACTGG	2 cut(s)	202, 392
BseRI	GAGGAG	9 cut(s)	539, 634, 637, 640, 643, 1013, 1228, 1385, 1390
BseX3I	CGGCCG	1 cut(s)	331
BseXI	GCAGC	4 cut(s)	617, 1253, 1275, 1612
BsgI	GTGCAG	1 cut(s)	1282
Bsh1285I	CGRYCG	1 cut(s)	334
BshFI	GGCC	6 cut(s)	228, 333, 877, 893, 907, 915
BshNI	GGYRCC	2 cut(s)	388, 682
BshVI	ATCGAT	1 cut(s)	117
BsiEI	CGRYCG	1 cut(s)	334
BsiHKCI	CYCGRG	2 cut(s)	355, 887
BsiSI	CCGG	8 cut(s)	296, 356, 582, 686, 904, 948, 999, 1181
BslFI	GGGAC	5 cut(s)	277, 338, 436, 988, 1192
BslI	CCNNNNNNNGG	3 cut(s)	357, 601, 1527
BsmAI	GTCTC	2 cut(s)	188, 864
BsmFI	GGGAC	5 cut(s)	277, 338, 436, 988, 1192
BsmI	GAATGC	2 cut(s)	1102, 1349
BsnI	GGCC	6 cut(s)	228, 333, 877, 893, 907, 915
BsoBI	CYCGRG	2 cut(s)	355, 887
Bsp1286I	GDGCHC	2 cut(s)	618, 1227
Bsp19I	CCATGG	1 cut(s)	755
BspACI	CCGC	8 cut(s)	598, 680, 809, 912, 920, 1278, 1360, 1397
BspANI	GGCC	6 cut(s)	228, 333, 877, 893, 907, 915
BspCNI	CTCAG	7 cut(s)	47, 521, 587, 689, 1038, 1203, 1518
BspDI	ATCGAT	1 cut(s)	117
BspHI	TCATGA	1 cut(s)	1633
BspLI	GGNNCC	8 cut(s)	229, 362, 390, 617, 684, 976, 977, 1224
BspMI	ACCTGC	1 cut(s)	1297
BspPI	GGATC	2 cut(s)	89, 1231
BspQI	GCTCTTC	2 cut(s)	294, 1510
BspT107I	GGYRCC	2 cut(s)	388, 682
BsrDI	GCAATG	2 cut(s)	777, 878
BsrFI	RCCGGY	4 cut(s)	581, 685, 903, 947
BsrI	ACTGG	2 cut(s)	202, 392
BssAI	RCCGGY	4 cut(s)	581, 685, 903, 947
BssECI	CCNNGG	9 cut(s)	294, 328, 355, 356, 429, 755, 1179, 1227, 1417
BssNI	GRCGYC	4 cut(s)	290, 588, 683, 1113
BssSI	CACGAG	1 cut(s)	563
BssT1I	CCWWGG	3 cut(s)	429, 755, 1227
Bst2BI	CACGAG	1 cut(s)	563
Bst2UI	CCWGG	1 cut(s)	909
Bst4CI	ACNGT	4 cut(s)	449, 458, 940, 1418
Bst6I	CTCTTC	5 cut(s)	294, 369, 557, 793, 1510
BstACI	GRCGYC	4 cut(s)	290, 588, 683, 1113
BstAPI	GCANNNNNTGC	1 cut(s)	1275
BstBAI	YACGTR	1 cut(s)	536
BstC8I	GCNNGC	3 cut(s)	570, 949, 1145
BstDEI	CTNAG	9 cut(s)	34, 276, 508, 574, 676, 1025, 1211, 1241, 1526
BstDSI	CCRYGG	3 cut(s)	328, 755, 1417
BstENI	CCTNNNNNAGG	1 cut(s)	1525
BstF5I	GGATG	8 cut(s)	97, 145, 160, 1189, 1464, 1504, 1567, 1576
BstH2I	RGCGCY	3 cut(s)	686, 954, 1069
BstHHI	GCGC	4 cut(s)	625, 685, 953, 1068
BstMAI	GTCTC	2 cut(s)	188, 864
BstMCI	CGRYCG	1 cut(s)	334
BstMWI	GCNNNNNNNGC	8 cut(s)	622, 631, 680, 883, 1063, 1153, 1275, 1403
BstNI	CCWGG	1 cut(s)	909
BstPAI	GACNNNNGTC	1 cut(s)	536
BstSCI	CCNGG	6 cut(s)	294, 354, 355, 907, 997, 1179
BstV1I	GCAGC	4 cut(s)	617, 1253, 1275, 1612
BstXI	CCANNNNNNTGG	1 cut(s)	87
BstZI	CGGCCG	1 cut(s)	331
Bsu15I	ATCGAT	1 cut(s)	117
Bsu36I	CCTNAGG	1 cut(s)	1211
BsuRI	GGCC	6 cut(s)	228, 333, 877, 893, 907, 915
BsuTUI	ATCGAT	1 cut(s)	117
BtgI	CCRYGG	3 cut(s)	328, 755, 1417
BtsCI	GGATG	8 cut(s)	97, 145, 160, 1189, 1464, 1504, 1567, 1576
BtsIMutI	CAGTG	3 cut(s)	6, 1130, 1406
BveI	ACCTGC	1 cut(s)	1297
Cac8I	GCNNGC	3 cut(s)	570, 949, 1145
CaiI	CAGNNNCTG	1 cut(s)	637
CciI	TCATGA	1 cut(s)	1633
CfoI	GCGC	4 cut(s)	625, 685, 953, 1068
Cfr10I	RCCGGY	4 cut(s)	581, 685, 903, 947
Cfr13I	GGNCC	5 cut(s)	227, 892, 914, 975, 992
Cfr9I	CCCGGG	1 cut(s)	355
ClaI	ATCGAT	1 cut(s)	117
CseI	GACGC	3 cut(s)	279, 596, 1121
Csp6I	GTAC	2 cut(s)	435, 1039
CviAII	CATG	8 cut(s)	149, 620, 756, 863, 1042, 1219, 1255, 1634
CviQI	GTAC	2 cut(s)	435, 1039
DdeI	CTNAG	9 cut(s)	34, 276, 508, 574, 676, 1025, 1211, 1241, 1526
DinI	GGCGCC	1 cut(s)	684
EaeI	YGGCCR	2 cut(s)	331, 905
EagI	CGGCCG	1 cut(s)	331
Eam1104I	CTCTTC	5 cut(s)	294, 369, 557, 793, 1510
EarI	CTCTTC	5 cut(s)	294, 369, 557, 793, 1510
EciI	GGCGGA	1 cut(s)	909
EclXI	CGGCCG	1 cut(s)	331
Eco130I	CCWWGG	3 cut(s)	429, 755, 1227
Eco24I	GRGCYC	2 cut(s)	618, 1227
Eco47I	GGWCC	2 cut(s)	975, 992
Eco52I	CGGCCG	1 cut(s)	331
Eco72I	CACGTG	1 cut(s)	536
Eco81I	CCTNAGG	1 cut(s)	1211
Eco88I	CYCGRG	2 cut(s)	355, 887
EcoNI	CCTNNNNNAGG	1 cut(s)	1525
EcoO109I	RGGNCCY	4 cut(s)	227, 892, 975, 992
EcoRI	GAATTC	1 cut(s)	526
EcoRII	CCWGG	1 cut(s)	907
EcoT14I	CCWWGG	3 cut(s)	429, 755, 1227
EcoT38I	GRGCYC	2 cut(s)	618, 1227
EgeI	GGCGCC	1 cut(s)	684
EheI	GGCGCC	1 cut(s)	684
ErhI	CCWWGG	3 cut(s)	429, 755, 1227
FaeI	CATG	8 cut(s)	152, 623, 759, 866, 1045, 1222, 1258, 1637
FaqI	GGGAC	5 cut(s)	277, 338, 436, 988, 1192
FatI	CATG	8 cut(s)	148, 619, 755, 862, 1041, 1218, 1254, 1633
FauI	CCCGC	2 cut(s)	1271, 1353
Fnu4HI	GCNGC	7 cut(s)	606, 681, 913, 1264, 1267, 1398, 1601
FokI	GGATG	8 cut(s)	104, 147, 152, 1196, 1471, 1511, 1574, 1583
FriOI	GRGCYC	2 cut(s)	618, 1227
Fsp4HI	GCNGC	7 cut(s)	606, 681, 913, 1264, 1267, 1398, 1601
GlaI	GCGC	4 cut(s)	624, 684, 952, 1067
GluI	GCNGC	7 cut(s)	606, 681, 913, 1264, 1267, 1398, 1601
HaeII	RGCGCY	3 cut(s)	686, 954, 1069
HaeIII	GGCC	6 cut(s)	228, 333, 877, 893, 907, 915
HapII	CCGG	8 cut(s)	296, 356, 582, 686, 904, 948, 999, 1181
HgaI	GACGC	3 cut(s)	279, 596, 1121
HhaI	GCGC	4 cut(s)	625, 685, 953, 1068
Hin1I	GRCGYC	4 cut(s)	290, 588, 683, 1113
Hin1II	CATG	8 cut(s)	152, 623, 759, 866, 1045, 1222, 1258, 1637
Hin6I	GCGC	4 cut(s)	623, 683, 951, 1066
HinP1I	GCGC	4 cut(s)	623, 683, 951, 1066
HinfI	GANTC	8 cut(s)	62, 250, 269, 628, 751, 898, 1020, 1334
HpaII	CCGG	8 cut(s)	296, 356, 582, 686, 904, 948, 999, 1181
HphI	GGTGA	9 cut(s)	252, 383, 571, 760, 893, 1013, 1246, 1393, 1463
Hpy188I	TCNGA	5 cut(s)	37, 318, 339, 732, 1095
Hpy188III	TCNNGA	3 cut(s)	931, 1201, 1634
Hpy99I	CGWCG	4 cut(s)	590, 1076, 1115, 1294
HpyCH4III	ACNGT	4 cut(s)	449, 458, 940, 1418
HpyCH4IV	ACGT	1 cut(s)	535
HpyCH4V	TGCA	7 cut(s)	764, 871, 986, 1057, 1147, 1263, 1269
HpyF10VI	GCNNNNNNNGC	8 cut(s)	622, 631, 680, 883, 1063, 1153, 1275, 1403
HpyF3I	CTNAG	9 cut(s)	34, 276, 508, 574, 676, 1025, 1211, 1241, 1526
HpySE526I	ACGT	1 cut(s)	535
Hsp92I	GRCGYC	4 cut(s)	290, 588, 683, 1113
Hsp92II	CATG	8 cut(s)	152, 623, 759, 866, 1045, 1222, 1258, 1637
HspAI	GCGC	4 cut(s)	623, 683, 951, 1066
KasI	GGCGCC	1 cut(s)	682
KflI	GGGWCCC	1 cut(s)	975
KroI	GCCGGC	1 cut(s)	947
KroNI	GCCGGC	1 cut(s)	949
LguI	GCTCTTC	2 cut(s)	294, 1510
LmnI	GCTCC	3 cut(s)	621, 1215, 1222
Lsp1109I	GCAGC	4 cut(s)	617, 1253, 1275, 1612
LweI	GCATC	1 cut(s)	1489
MaeII	ACGT	1 cut(s)	535
MaeIII	GTNAC	5 cut(s)	67, 258, 577, 688, 1001
MboII	GAAGA	9 cut(s)	67, 71, 311, 331, 386, 544, 780, 824, 1527
MhlI	GDGCHC	2 cut(s)	618, 1227
Mly113I	GGCGCC	1 cut(s)	683
MlyI	GAGTC	4 cut(s)	760, 892, 1014, 1328
MmeI	TCCRAC	1 cut(s)	823
MreI	CGCCGGCG	1 cut(s)	947
MroNI	GCCGGC	1 cut(s)	947
MseI	TTAA	3 cut(s)	396, 1062, 1654
MslI	CAYNNNNRTG	1 cut(s)	108
MspA1I	CMGCKG	2 cut(s)	680, 1266
MspI	CCGG	8 cut(s)	296, 356, 582, 686, 904, 948, 999, 1181
MspR9I	CCNGG	6 cut(s)	296, 356, 357, 909, 999, 1181
Mva1269I	GAATGC	2 cut(s)	1102, 1349
MvaI	CCWGG	1 cut(s)	909
MwoI	GCNNNNNNNGC	8 cut(s)	622, 631, 680, 883, 1063, 1153, 1275, 1403
NaeI	GCCGGC	1 cut(s)	949
NarI	GGCGCC	1 cut(s)	683
NciI	CCSGG	5 cut(s)	296, 356, 357, 999, 1181
NcoI	CCATGG	1 cut(s)	755
NgoMIV	GCCGGC	1 cut(s)	947
NlaIII	CATG	8 cut(s)	152, 623, 759, 866, 1045, 1222, 1258, 1637
NlaIV	GGNNCC	8 cut(s)	229, 362, 390, 617, 684, 976, 977, 1224
NmuCI	GTSAC	4 cut(s)	67, 258, 577, 1001
PaeR7I	CTCGAG	1 cut(s)	887
PagI	TCATGA	1 cut(s)	1633
PaqCI	CACCTGC	1 cut(s)	1297
PciSI	GCTCTTC	2 cut(s)	294, 1510
PcsI	WCGNNNNNNNCGW	2 cut(s)	561, 1298
PctI	GAATGC	2 cut(s)	1102, 1349
PdiI	GCCGGC	1 cut(s)	949
PfeI	GAWTC	4 cut(s)	62, 250, 269, 628
PflMI	CCANNNNNTGG	1 cut(s)	601
PkrI	GCNGC	7 cut(s)	607, 682, 914, 1265, 1268, 1399, 1602
PleI	GAGTC	4 cut(s)	759, 892, 1014, 1328
PluTI	GGCGCC	1 cut(s)	686
PmaCI	CACGTG	1 cut(s)	536
PmlI	CACGTG	1 cut(s)	536
PpsI	GAGTC	4 cut(s)	759, 892, 1014, 1328
Ppu21I	YACGTR	1 cut(s)	536
PpuMI	RGGWCCY	2 cut(s)	975, 992
PshAI	GACNNNNGTC	1 cut(s)	536
Psp5II	RGGWCCY	2 cut(s)	975, 992
Psp6I	CCWGG	1 cut(s)	907
PspCI	CACGTG	1 cut(s)	536
PspGI	CCWGG	1 cut(s)	907
PspN4I	GGNNCC	8 cut(s)	229, 362, 390, 617, 684, 976, 977, 1224
PspPI	GGNCC	5 cut(s)	227, 892, 914, 975, 992
PspPPI	RGGWCCY	2 cut(s)	975, 992
PspXI	VCTCGAGB	1 cut(s)	887
PstNI	CAGNNNCTG	1 cut(s)	637
PvuII	CAGCTG	1 cut(s)	1266
RsaI	GTAC	2 cut(s)	436, 1040
RsaNI	GTAC	2 cut(s)	435, 1039
RseI	CAYNNNNRTG	1 cut(s)	108
SapI	GCTCTTC	2 cut(s)	294, 1510
SaqAI	TTAA	3 cut(s)	396, 1062, 1654
SatI	GCNGC	7 cut(s)	606, 681, 913, 1264, 1267, 1398, 1601
Sau96I	GGNCC	5 cut(s)	227, 892, 914, 975, 992
SchI	GAGTC	4 cut(s)	760, 892, 1014, 1328
ScrFI	CCNGG	6 cut(s)	296, 356, 357, 909, 999, 1181
SduI	GDGCHC	2 cut(s)	618, 1227
SfaNI	GCATC	1 cut(s)	1489
SfoI	GGCGCC	1 cut(s)	684
Sfr274I	CTCGAG	1 cut(s)	887
SgrAI	CRCCGGYG	2 cut(s)	581, 947
SinI	GGWCC	2 cut(s)	975, 992
SlaI	CTCGAG	1 cut(s)	887
SmaI	CCCGGG	1 cut(s)	357
SmiMI	CAYNNNNRTG	1 cut(s)	108
SmlI	CTYRAG	1 cut(s)	887
SmoI	CTYRAG	1 cut(s)	887
SsiI	CCGC	8 cut(s)	598, 680, 809, 912, 920, 1278, 1360, 1397
SspDI	GGCGCC	1 cut(s)	682
StyD4I	CCNGG	6 cut(s)	294, 354, 355, 907, 997, 1179
StyI	CCWWGG	3 cut(s)	429, 755, 1227
TaaI	ACNGT	4 cut(s)	449, 458, 940, 1418
TaiI	ACGT	1 cut(s)	538
TatI	WGTACW	1 cut(s)	1038
TauI	GCSGC	3 cut(s)	683, 915, 1400
TfiI	GAWTC	4 cut(s)	62, 250, 269, 628
Tru1I	TTAA	3 cut(s)	396, 1062, 1654
Tru9I	TTAA	3 cut(s)	396, 1062, 1654
TscAI	CASTG	3 cut(s)	13, 1137, 1413
TseFI	GTSAC	4 cut(s)	67, 258, 577, 1001
TseI	GCWGC	4 cut(s)	605, 1263, 1266, 1600
Tsp45I	GTSAC	4 cut(s)	67, 258, 577, 1001
TspDTI	ATGAA	7 cut(s)	149, 261, 749, 1058, 1442, 1568, 1608
TspMI	CCCGGG	1 cut(s)	355
TspRI	CASTG	3 cut(s)	13, 1137, 1413
Van91I	CCANNNNNTGG	1 cut(s)	601
VpaK11BI	GGWCC	2 cut(s)	975, 992
XagI	CCTNNNNNAGG	1 cut(s)	1525
XapI	RAATTY	3 cut(s)	526, 737, 815
XcmI	CCANNNNNNNNNTGG	1 cut(s)	598
XhoI	CTCGAG	1 cut(s)	887
XmaI	CCCGGG	1 cut(s)	355

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.