Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr2

Orthogroup ID

OG0015443

Physical Location & Seq

Genomic Coordinates Forward (+)

60062511 .. 60064168

Gene Structure 1658 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw2G036480.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1620 bp

ATGACCACTAATGAACTCCCACAGCCGAACCCTACTTCGGAACAGATCCTCGACTGGCTTGAGGACTCGGTTTCTTTCTTCCCATCCTTCTTGGACGATCCTTACCAGTCGAATGGTTATCAATGGTGGGATGAAACCCAAGATCTCATTCATGCCAACACCAATTCTGTCGCCAACAACGCTAACATTGCCGTAGCAGAAAATCCAGTCAGCCCTGTTACTCAGTTGCCATCATCGGATTCATCCAAGAAGCGAAAATCCCCGGACGGCCCGGTTTCGGAAACGTCCTCACACATTGACCGGAAGGCGAAAACCGGCCGGCCGGTCAACAAGGCCGAAAACGATGTCAAGAAAGCATCCGATGAAGTGGCCACACCGCCAGTTAAGAGAGCAAATGGTAACAAAAAAGGAACAGGGAAAGGTACCGGAAATAACTGTAATAACGGTAATAGCAAGGAAGGGAGGTGGGCAGAGCAGTTGCTCAACCCTTGTGCATCAGCCATCACTGGTGGGAATCTGACACGTGTCCAGCACCTCCTCTACGTCCTCCACGAGCTCGCCTCCCTCACCGGCGACGCCAACCACCGCTTGGCAGCTCACGGCCTCCGAGCGCTGACTCACCACCTGTCATCCAATTCTTCCTCCTCTGCTCCCAATGCCTCCGCCTCAGTAGGACCTGTTGTCACGTTTTCTTCAACAGAACCAAGATTTTTCCAAAAGTCTCTGCTGAAATTCTACGAGGTGAGTCCATGGTTTGCTTTCCCTAACAACATAGCCAACTCTTCAATACTACAAGTACTCGCCGCTGAGCCTAATCGAGCTAGTACTCTTCACATTGTTGACATTGGGGTTTCTCATGGGATGCAATGGCCGACTCTGCTTGAAGCCTTGACTCGCCGTCCAGGTGGGCCTCCTCCATTGGTGAAAATCACAGTCATTGCACCTTTCACAGTCGAGAATGATCAAAACTCTGAAGCACCATTTTCTATTGGTCCTCCTGGTGACAATTTCTCTGCTAGACTTCTCGGTTTCGCAAAATCCATGAACATCAATTTACAGATCAACCTCATTGATGCCTCTAGTGATGAGACATTGATTGTTTGCTTGCAATTTAGGCTGCACCAATTGAACCACAATACTCCTCCAAATGAAAGAACCGAATTCTTGAATATTCTGAGGAACATGGAACCGAAAGGGGTGATATTAAGCGAGAACAACATGGAATGCAGCTGCAACAGCTGTGGGGATTTCGCAACAGGGTTCTCACGGCAAGTGGAGTACCTTTGGAGGTTTCTAGACTCCACTAGCGCAGCGTTCAAAGGGCGTGAGAGCGAGGAGAGGAAGGTGATGGAAGGAGAGGCAGCCAAGGCATTGACCAACCGCGGCGAGATGAATGAAGGGAAGGAGAAGTGGTGTGAGAGAATGAAGGAAGTGGGGTTCGTGGGGGAGGTTTTTGGTGAGGATGCCATTGATGGAGGGAGAGCCTTGTTGAGGAAGTATGATAGCAATTGGGAAATGAGAGTGGATGAAAAAGATGGGTGTGCAGGATTATGGTGGAAAGGTCAGCCTGTTTCATTTTGTTCATTGTGGAAGAATGGATACCAAGTAAGTTATGATTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0008150 GO:0009889 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0022603 GO:0031323 GO:0031326 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0044424 GO:0044464 GO:0048831 GO:0050789 GO:0050793 GO:0050794 GO:0051171 GO:0051239 GO:0051252 GO:0060255 GO:0060688 GO:0065007 GO:0080090 GO:0097159 GO:0140110 GO:1900618 GO:1901363 GO:1903506 GO:1905428 GO:2000026 GO:2000032 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

GRAS

Protein Analysis

539

Amino Acids

59.33

Weight (kDa)

5.74

Isoelectric Point (pI)

43.5

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
GRAS	PF03514	158 - 531	8.3e-75	GRAS domain family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0015443)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G13840
fragaria_vesca	FvH4_2g04140
malus_domestica	MD09G1183000.v1.1
prunus_persica	Prupe.3G040400_v2.0.a1
pyrus_communis	pycom09g10030
rosa_chinensis	RchiOBHm_Chr2g0145631
rosa_laevigata	RLG00000020155
rosa_multiflora	Rmu_sc0003046.1_g000006
rosa_roxburghii	Rroxscaffold_152G00434650 Rroxscaffold_2G00100590
rosa_rugosa	Rorug02G0392400
rosa_samantha	Rh2AG446700 Rh2BG458400 Rh2CG433400 Rh2DG468000
rosa_wichuraiana	Rw2G036480

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc65I	GGTACC	1 cut(s)	422
AccB1I	GGYRCC	1 cut(s)	422
AccB7I	CCANNNNNTGG	1 cut(s)	589
AccII	CGCG	1 cut(s)	1383
AciI	CCGC	6 cut(s)	377, 586, 663, 804, 1381, 1383
AclWI	GGATC	2 cut(s)	40, 92
AcoI	YGGCCR	4 cut(s)	316, 320, 369, 869
AcsI	RAATTY	2 cut(s)	731, 1160
AcuI	CTGAAG	1 cut(s)	993
AcvI	CACGTG	1 cut(s)	524
AcyI	GRCGYC	1 cut(s)	576
AfaI	GTAC	4 cut(s)	424, 798, 826, 1280
AfeI	AGCGCT	1 cut(s)	612
AfiI	CCNNNNNNNGG	4 cut(s)	37, 277, 589, 1491
AflIII	ACRYGT	2 cut(s)	521, 523
AgsI	TTSAA	6 cut(s)	696, 786, 884, 1129, 1168, 1318
AhdI	GACNNNNNGTC	2 cut(s)	680, 897
AjnI	CCWGG	2 cut(s)	901, 997
AjuI	GAANNNNNNNTTGG	2 cut(s)	132, 164
AloI	GAACNNNNNNTCC	2 cut(s)	1421, 1453
AluBI	AGCT	5 cut(s)	556, 596, 821, 1230, 1239
AluI	AGCT	5 cut(s)	556, 596, 821, 1230, 1239
Alw21I	GWGCWC	1 cut(s)	558
Alw26I	GTCTC	2 cut(s)	726, 1082
AlwI	GGATC	2 cut(s)	40, 92
Aor51HI	AGCGCT	1 cut(s)	612
AoxI	GGCC	8 cut(s)	268, 316, 320, 333, 369, 601, 869, 908
ApeKI	GCWGC	6 cut(s)	593, 1117, 1227, 1230, 1310, 1361
ApoI	RAATTY	2 cut(s)	731, 1160
ArsI	GACNNNNNNTTYG	2 cut(s)	330, 362
Asp718I	GGTACC	1 cut(s)	422
AspLEI	GCGC	2 cut(s)	613, 1310
AspS9I	GGNCC	4 cut(s)	269, 674, 908, 992
AsuC2I	CCSGG	2 cut(s)	263, 272
AsuHPI	GGTGA	8 cut(s)	559, 611, 754, 934, 1013, 1210, 1357, 1469
AvaII	GGWCC	2 cut(s)	674, 992
BalI	TGGCCA	1 cut(s)	371
BanI	GGYRCC	1 cut(s)	422
BanII	GRGCYC	1 cut(s)	558
BarI	GAAGNNNNNNTAC	2 cut(s)	1583, 1615
BauI	CACGAG	1 cut(s)	551
BbrPI	CACGTG	1 cut(s)	524
Bbv12I	GWGCWC	1 cut(s)	558
BbvI	GCAGC	6 cut(s)	605, 1104, 1217, 1239, 1322, 1373
BccI	CCATC	6 cut(s)	91, 238, 509, 1342, 1466, 1529
BceAI	ACGGC	5 cut(s)	176, 283, 616, 882, 1283
BciT130I	CCWGG	2 cut(s)	903, 999
BciVI	GTATCC	1 cut(s)	1592
BclI	TGATCA	1 cut(s)	961
BcnI	CCSGG	2 cut(s)	263, 272
BcoDI	GTCTC	2 cut(s)	726, 1082
BfaI	CTAG	5 cut(s)	822, 1017, 1080, 1295, 1305
BfoI	RGCGCY	1 cut(s)	614
BfuI	GTATCC	1 cut(s)	1592
BglII	AGATCT	1 cut(s)	142
BisI	GCNGC	8 cut(s)	594, 804, 1118, 1228, 1231, 1311, 1362, 1384
BlpI	GCTNAGC	1 cut(s)	807
BlsI	GCNGC	8 cut(s)	595, 805, 1119, 1229, 1232, 1312, 1363, 1385
BmcAI	AGTACT	2 cut(s)	798, 826
Bme1390I	CCNGG	4 cut(s)	263, 272, 903, 999
Bme18I	GGWCC	2 cut(s)	674, 992
BmeRI	GACNNNNNGTC	2 cut(s)	680, 897
BmgT120I	GGNCC	4 cut(s)	269, 674, 908, 992
BmiI	GGNNCC	2 cut(s)	424, 1188
BmrFI	CCNGG	4 cut(s)	263, 272, 903, 999
BmsI	GCATC	5 cut(s)	365, 503, 852, 1063, 1453
BoxI	GACNNNNGTC	1 cut(s)	524
BplI	GAGNNNNNCTC	2 cut(s)	545, 577
Bpu1102I	GCTNAGC	1 cut(s)	807
BpuEI	CTTGAG	1 cut(s)	80
BpuMI	CCSGG	2 cut(s)	263, 272
BsaAI	YACGTR	1 cut(s)	524
BsaHI	GRCGYC	1 cut(s)	576
BsaJI	CCNNGG	4 cut(s)	261, 749, 1365, 1381
BsaWI	WCCGGW	2 cut(s)	300, 425
BsaXI	ACNNNNNCTCC	2 cut(s)	1397, 1427
Bsc4I	CCNNNNNNNGG	4 cut(s)	37, 277, 589, 1491
Bse118I	RCCGGY	4 cut(s)	314, 318, 322, 569
Bse1I	ACTGG	5 cut(s)	59, 106, 206, 380, 511
Bse3DI	GCAATG	3 cut(s)	186, 872, 936
BseBI	CCWGG	2 cut(s)	903, 999
BseDI	CCNNGG	4 cut(s)	261, 749, 1365, 1381
BseGI	GGATG	8 cut(s)	83, 136, 242, 356, 629, 867, 1468, 1531
BseLI	CCNNNNNNNGG	4 cut(s)	37, 277, 589, 1491
BseMI	GCAATG	3 cut(s)	186, 872, 936
BseMII	CTCAG	4 cut(s)	236, 681, 798, 1166
BseNI	ACTGG	5 cut(s)	59, 106, 206, 380, 511
BseRI	GAGGAG	5 cut(s)	527, 634, 903, 1131, 1349
BseX3I	CGGCCG	2 cut(s)	316, 320
BseXI	GCAGC	6 cut(s)	605, 1104, 1217, 1239, 1322, 1373
BsgI	GTGCAG	2 cut(s)	1103, 1563
Bsh1236I	CGCG	1 cut(s)	1383
Bsh1285I	CGRYCG	2 cut(s)	319, 323
BshFI	GGCC	8 cut(s)	270, 318, 322, 335, 371, 603, 871, 910
BshNI	GGYRCC	1 cut(s)	422
BsiEI	CGRYCG	2 cut(s)	319, 323
BsiHKAI	GWGCWC	1 cut(s)	558
BsiSI	CCGG	8 cut(s)	263, 272, 301, 315, 319, 323, 426, 570
BslI	CCNNNNNNNGG	4 cut(s)	37, 277, 589, 1491
BsmAI	GTCTC	2 cut(s)	726, 1082
BsmI	GAATGC	1 cut(s)	1229
BsnI	GGCC	8 cut(s)	270, 318, 322, 335, 371, 603, 871, 910
Bsp1286I	GDGCHC	1 cut(s)	558
Bsp143I	GATC	5 cut(s)	45, 97, 142, 961, 1059
Bsp1720I	GCTNAGC	1 cut(s)	807
Bsp19I	CCATGG	1 cut(s)	749
BspACI	CCGC	6 cut(s)	377, 586, 663, 804, 1381, 1383
BspANI	GGCC	8 cut(s)	270, 318, 322, 335, 371, 603, 871, 910
BspCNI	CTCAG	4 cut(s)	235, 680, 799, 1167
BspFNI	CGCG	1 cut(s)	1383
BspLI	GGNNCC	2 cut(s)	424, 1188
BspPI	GGATC	2 cut(s)	40, 92
BspT107I	GGYRCC	1 cut(s)	422
BsrDI	GCAATG	3 cut(s)	186, 872, 936
BsrFI	RCCGGY	4 cut(s)	314, 318, 322, 569
BsrI	ACTGG	5 cut(s)	59, 106, 206, 380, 511
BssAI	RCCGGY	4 cut(s)	314, 318, 322, 569
BssECI	CCNNGG	4 cut(s)	261, 749, 1365, 1381
BssMI	GATC	5 cut(s)	45, 97, 142, 961, 1059
BssNI	GRCGYC	1 cut(s)	576
BssSI	CACGAG	1 cut(s)	551
BssT1I	CCWWGG	2 cut(s)	749, 1365
Bst2BI	CACGAG	1 cut(s)	551
Bst2UI	CCWGG	2 cut(s)	903, 999
Bst4CI	ACNGT	4 cut(s)	437, 446, 934, 952
Bst6I	CTCTTC	2 cut(s)	787, 834
BstACI	GRCGYC	1 cut(s)	576
BstBAI	YACGTR	1 cut(s)	524
BstC8I	GCNNGC	3 cut(s)	320, 558, 1106
BstDEI	CTNAG	4 cut(s)	222, 667, 807, 1175
BstDSI	CCRYGG	2 cut(s)	749, 1381
BstENI	CCTNNNNNAGG	1 cut(s)	1489
BstF5I	GGATG	8 cut(s)	83, 136, 242, 356, 629, 867, 1468, 1531
BstFNI	CGCG	1 cut(s)	1383
BstH2I	RGCGCY	1 cut(s)	614
BstHHI	GCGC	2 cut(s)	613, 1310
BstKTI	GATC	5 cut(s)	48, 100, 145, 964, 1062
BstMAI	GTCTC	2 cut(s)	726, 1082
BstMBI	GATC	5 cut(s)	45, 97, 142, 961, 1059
BstMCI	CGRYCG	2 cut(s)	319, 323
BstMWI	GCNNNNNNNGC	7 cut(s)	179, 188, 656, 877, 1114, 1236, 1367
BstNI	CCWGG	2 cut(s)	903, 999
BstPAI	GACNNNNGTC	1 cut(s)	524
BstSCI	CCNGG	4 cut(s)	261, 270, 901, 997
BstUI	CGCG	1 cut(s)	1383
BstV1I	GCAGC	6 cut(s)	605, 1104, 1217, 1239, 1322, 1373
BstX2I	RGATCY	2 cut(s)	45, 142
BstXI	CCANNNNNNTGG	1 cut(s)	113
BstYI	RGATCY	2 cut(s)	45, 142
BstZI	CGGCCG	2 cut(s)	316, 320
BsuI	GTATCC	1 cut(s)	1592
BsuRI	GGCC	8 cut(s)	270, 318, 322, 335, 371, 603, 871, 910
BtgI	CCRYGG	2 cut(s)	749, 1381
BtsCI	GGATG	8 cut(s)	83, 136, 242, 356, 629, 867, 1468, 1531
BtsIMutI	CAGTG	1 cut(s)	504
Cac8I	GCNNGC	3 cut(s)	320, 558, 1106
CfoI	GCGC	2 cut(s)	613, 1310
Cfr10I	RCCGGY	4 cut(s)	314, 318, 322, 569
Cfr13I	GGNCC	4 cut(s)	269, 674, 908, 992
Cfr42I	CCGCGG	1 cut(s)	1384
CseI	GACGC	1 cut(s)	584
Csp6I	GTAC	4 cut(s)	423, 797, 825, 1279
CspCI	CAANNNNNGTGG	2 cut(s)	1222, 1257
CviAII	CATG	6 cut(s)	152, 750, 857, 1042, 1183, 1219
CviQI	GTAC	4 cut(s)	423, 797, 825, 1279
DdeI	CTNAG	4 cut(s)	222, 667, 807, 1175
DpnI	GATC	5 cut(s)	47, 99, 144, 963, 1061
DpnII	GATC	5 cut(s)	45, 97, 142, 961, 1059
DriI	GACNNNNNGTC	2 cut(s)	680, 897
EaeI	YGGCCR	4 cut(s)	316, 320, 369, 869
EagI	CGGCCG	2 cut(s)	316, 320
Eam1104I	CTCTTC	2 cut(s)	787, 834
Eam1105I	GACNNNNNGTC	2 cut(s)	680, 897
EarI	CTCTTC	2 cut(s)	787, 834
EciI	GGCGGA	1 cut(s)	652
Ecl136II	GAGCTC	1 cut(s)	556
EclXI	CGGCCG	2 cut(s)	316, 320
Eco130I	CCWWGG	2 cut(s)	749, 1365
Eco24I	GRGCYC	1 cut(s)	558
Eco47I	GGWCC	2 cut(s)	674, 992
Eco47III	AGCGCT	1 cut(s)	612
Eco52I	CGGCCG	2 cut(s)	316, 320
Eco53kI	GAGCTC	1 cut(s)	556
Eco57I	CTGAAG	1 cut(s)	993
Eco72I	CACGTG	1 cut(s)	524
EcoICRI	GAGCTC	1 cut(s)	556
EcoNI	CCTNNNNNAGG	1 cut(s)	1489
EcoO109I	RGGNCCY	1 cut(s)	674
EcoRI	GAATTC	1 cut(s)	1160
EcoRII	CCWGG	2 cut(s)	901, 997
EcoT14I	CCWWGG	2 cut(s)	749, 1365
EcoT38I	GRGCYC	1 cut(s)	558
ErhI	CCWWGG	2 cut(s)	749, 1365
FaeI	CATG	6 cut(s)	155, 753, 860, 1045, 1186, 1222
FatI	CATG	6 cut(s)	151, 749, 856, 1041, 1182, 1218
FbaI	TGATCA	1 cut(s)	961
Fnu4HI	GCNGC	8 cut(s)	594, 804, 1118, 1228, 1231, 1311, 1362, 1384
FokI	GGATG	8 cut(s)	70, 143, 229, 343, 616, 874, 1475, 1538
FriOI	GRGCYC	1 cut(s)	558
FseI	GGCCGGCC	1 cut(s)	322
Fsp4HI	GCNGC	8 cut(s)	594, 804, 1118, 1228, 1231, 1311, 1362, 1384
FspBI	CTAG	5 cut(s)	822, 1017, 1080, 1295, 1305
GlaI	GCGC	2 cut(s)	612, 1309
GluI	GCNGC	8 cut(s)	594, 804, 1118, 1228, 1231, 1311, 1362, 1384
HaeII	RGCGCY	1 cut(s)	614
HaeIII	GGCC	8 cut(s)	270, 318, 322, 335, 371, 603, 871, 910
HapII	CCGG	8 cut(s)	263, 272, 301, 315, 319, 323, 426, 570
HgaI	GACGC	1 cut(s)	584
HhaI	GCGC	2 cut(s)	613, 1310
Hin1I	GRCGYC	1 cut(s)	576
Hin1II	CATG	6 cut(s)	155, 753, 860, 1045, 1186, 1222
Hin6I	GCGC	2 cut(s)	611, 1308
HinP1I	GCGC	2 cut(s)	611, 1308
HincII	GTYRAC	2 cut(s)	328, 841
HindII	GTYRAC	2 cut(s)	328, 841
HinfI	GANTC	8 cut(s)	65, 239, 514, 616, 745, 874, 892, 1298
HpaII	CCGG	8 cut(s)	263, 272, 301, 315, 319, 323, 426, 570
HphI	GGTGA	8 cut(s)	559, 611, 754, 934, 1013, 1210, 1357, 1469
Hpy166II	GTNNAC	2 cut(s)	328, 841
Hpy188I	TCNGA	8 cut(s)	40, 238, 280, 361, 519, 608, 973, 1176
Hpy188III	TCNNGA	4 cut(s)	349, 955, 1165, 1295
Hpy8I	GTNNAC	2 cut(s)	328, 841
Hpy99I	CGWCG	1 cut(s)	578
HpyAV	CCTTC	8 cut(s)	97, 298, 452, 1336, 1346, 1391, 1396, 1420
HpyCH4III	ACNGT	4 cut(s)	437, 446, 934, 952
HpyCH4IV	ACGT	4 cut(s)	284, 523, 543, 686
HpyCH4V	TGCA	8 cut(s)	494, 865, 941, 1108, 1120, 1227, 1233, 1544
HpyF10VI	GCNNNNNNNGC	7 cut(s)	179, 188, 656, 877, 1114, 1236, 1367
HpyF3I	CTNAG	4 cut(s)	222, 667, 807, 1175
HpySE526I	ACGT	4 cut(s)	284, 523, 543, 686
Hsp92I	GRCGYC	1 cut(s)	576
Hsp92II	CATG	6 cut(s)	155, 753, 860, 1045, 1186, 1222
HspAI	GCGC	2 cut(s)	611, 1308
KpnI	GGTACC	1 cut(s)	426
KroI	GCCGGC	1 cut(s)	318
KroNI	GCCGGC	1 cut(s)	320
Ksp22I	TGATCA	1 cut(s)	961
KspI	CCGCGG	1 cut(s)	1384
Kzo9I	GATC	5 cut(s)	45, 97, 142, 961, 1059
LmnI	GCTCC	1 cut(s)	655
Lsp1109I	GCAGC	6 cut(s)	605, 1104, 1217, 1239, 1322, 1373
LweI	GCATC	5 cut(s)	365, 503, 852, 1063, 1453
MaeI	CTAG	5 cut(s)	822, 1017, 1080, 1295, 1305
MaeII	ACGT	4 cut(s)	284, 523, 543, 686
MaeIII	GTNAC	4 cut(s)	217, 398, 682, 1001
MalI	GATC	5 cut(s)	47, 99, 144, 963, 1061
MboI	GATC	5 cut(s)	45, 97, 142, 961, 1059
MboII	GAAGA	6 cut(s)	70, 630, 684, 774, 821, 1603
MfeI	CAATTG	2 cut(s)	1124, 1507
MflI	RGATCY	2 cut(s)	45, 142
MhlI	GDGCHC	1 cut(s)	558
MlsI	TGGCCA	1 cut(s)	371
MluCI	AATT	9 cut(s)	163, 634, 731, 1006, 1051, 1109, 1124, 1160, 1507
MluNI	TGGCCA	1 cut(s)	371
MlyI	GAGTC	6 cut(s)	59, 610, 754, 868, 886, 1292
Mox20I	TGGCCA	1 cut(s)	371
MroNI	GCCGGC	1 cut(s)	318
MscI	TGGCCA	1 cut(s)	371
MseI	TTAA	2 cut(s)	384, 1205
Msp20I	TGGCCA	1 cut(s)	371
MspA1I	CMGCKG	4 cut(s)	806, 1230, 1239, 1383
MspI	CCGG	8 cut(s)	263, 272, 301, 315, 319, 323, 426, 570
MspR9I	CCNGG	4 cut(s)	263, 272, 903, 999
MunI	CAATTG	2 cut(s)	1124, 1507
Mva1269I	GAATGC	1 cut(s)	1229
MvaI	CCWGG	2 cut(s)	903, 999
MvnI	CGCG	1 cut(s)	1383
MwoI	GCNNNNNNNGC	7 cut(s)	179, 188, 656, 877, 1114, 1236, 1367
NaeI	GCCGGC	1 cut(s)	320
NciI	CCSGG	2 cut(s)	263, 272
NcoI	CCATGG	1 cut(s)	749
NdeII	GATC	5 cut(s)	45, 97, 142, 961, 1059
NgoMIV	GCCGGC	1 cut(s)	318
NlaIII	CATG	6 cut(s)	155, 753, 860, 1045, 1186, 1222
NlaIV	GGNNCC	2 cut(s)	424, 1188
NmuCI	GTSAC	2 cut(s)	682, 1001
PcsI	WCGNNNNNNNCGW	1 cut(s)	549
PctI	GAATGC	1 cut(s)	1229
PdiI	GCCGGC	1 cut(s)	320
PfeI	GAWTC	2 cut(s)	239, 514
PflMI	CCANNNNNTGG	1 cut(s)	589
PkrI	GCNGC	8 cut(s)	595, 805, 1119, 1229, 1232, 1312, 1363, 1385
PleI	GAGTC	6 cut(s)	59, 610, 753, 868, 886, 1292
PmaCI	CACGTG	1 cut(s)	524
PmlI	CACGTG	1 cut(s)	524
PpsI	GAGTC	6 cut(s)	59, 610, 753, 868, 886, 1292
Ppu21I	YACGTR	1 cut(s)	524
PpuMI	RGGWCCY	1 cut(s)	674
PshAI	GACNNNNGTC	1 cut(s)	524
Psp124BI	GAGCTC	1 cut(s)	558
Psp5II	RGGWCCY	1 cut(s)	674
Psp6I	CCWGG	2 cut(s)	901, 997
PspCI	CACGTG	1 cut(s)	524
PspGI	CCWGG	2 cut(s)	901, 997
PspN4I	GGNNCC	2 cut(s)	424, 1188
PspPI	GGNCC	4 cut(s)	269, 674, 908, 992
PspPPI	RGGWCCY	1 cut(s)	674
PsuI	RGATCY	2 cut(s)	45, 142
PvuII	CAGCTG	2 cut(s)	1230, 1239
RigI	GGCCGGCC	1 cut(s)	322
RsaI	GTAC	4 cut(s)	424, 798, 826, 1280
RsaNI	GTAC	4 cut(s)	423, 797, 825, 1279
SacI	GAGCTC	1 cut(s)	558
SacII	CCGCGG	1 cut(s)	1384
SaqAI	TTAA	2 cut(s)	384, 1205
SatI	GCNGC	8 cut(s)	594, 804, 1118, 1228, 1231, 1311, 1362, 1384
Sau3AI	GATC	5 cut(s)	45, 97, 142, 961, 1059
Sau96I	GGNCC	4 cut(s)	269, 674, 908, 992
ScaI	AGTACT	2 cut(s)	798, 826
SchI	GAGTC	6 cut(s)	59, 610, 754, 868, 886, 1292
ScrFI	CCNGG	4 cut(s)	263, 272, 903, 999
SduI	GDGCHC	1 cut(s)	558
SfaNI	GCATC	5 cut(s)	365, 503, 852, 1063, 1453
Sfr303I	CCGCGG	1 cut(s)	1384
SgrAI	CRCCGGYG	1 cut(s)	569
SgrBI	CCGCGG	1 cut(s)	1384
SinI	GGWCC	2 cut(s)	674, 992
SmlI	CTYRAG	1 cut(s)	59
SmoI	CTYRAG	1 cut(s)	59
Sse9I	AATT	9 cut(s)	163, 634, 731, 1006, 1051, 1109, 1124, 1160, 1507
SsiI	CCGC	6 cut(s)	377, 586, 663, 804, 1381, 1383
SspI	AATATT	1 cut(s)	1171
SspMI	CTAG	5 cut(s)	822, 1017, 1080, 1295, 1305
SstI	GAGCTC	1 cut(s)	558
StyD4I	CCNGG	4 cut(s)	261, 270, 901, 997
StyI	CCWWGG	2 cut(s)	749, 1365
TaaI	ACNGT	4 cut(s)	437, 446, 934, 952
TaiI	ACGT	4 cut(s)	287, 526, 546, 689
TaqI	TCGA	4 cut(s)	51, 110, 817, 954
TasI	AATT	9 cut(s)	163, 634, 731, 1006, 1051, 1109, 1124, 1160, 1507
TatI	WGTACW	2 cut(s)	796, 824
TauI	GCSGC	2 cut(s)	806, 1386
TfiI	GAWTC	2 cut(s)	239, 514
Tru1I	TTAA	2 cut(s)	384, 1205
Tru9I	TTAA	2 cut(s)	384, 1205
TscAI	CASTG	1 cut(s)	511
TseFI	GTSAC	2 cut(s)	682, 1001
TseI	GCWGC	6 cut(s)	593, 1117, 1227, 1230, 1310, 1361
Tsp45I	GTSAC	2 cut(s)	682, 1001
TspRI	CASTG	1 cut(s)	511
Van91I	CCANNNNNTGG	1 cut(s)	589
VpaK11BI	GGWCC	2 cut(s)	674, 992
XagI	CCTNNNNNAGG	1 cut(s)	1489
XapI	RAATTY	2 cut(s)	731, 1160
XbaI	TCTAGA	1 cut(s)	1294
XcmI	CCANNNNNNNNNTGG	1 cut(s)	586
XspI	CTAG	5 cut(s)	822, 1017, 1080, 1295, 1305
ZrmI	AGTACT	2 cut(s)	798, 826

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.