MD10G1043100.v1.1
ERF Family

Belongs to the protein kinase superfamily. Ser Thr protein kinase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr10
OG0008234
Physical Location & Seq
Forward (+)
5796676 .. 5812056
15381 bp
Loading structure...
UTR
Exon/CDS
Intron
MD10G1043100.v1.1.491

Sequence Viewer

Length: 1881 bp
ATGGAGAGAAAGGTTGGGAATTCAGTTTGTCTATGGTTCATCTTGTTGGCTCATCCACTATGGATGACAATGGTGCTTGCTAATATGGAAGGTGATGCCTTGCATACTCTAAGGACCAACTTGGAGGACCCCAACAATGTCCTGCAAAGTTGGGATCCTACTCTTGTGAACCCTTGTACGTGGTTTCATGTTACATGCAACAATGAAAATAGCGTCATAAGAGTTGATCTTGGAAATGCAGCCTTGTCTGGTCAACTTGTTCCACAGCTTGGCCTTCTCAAGAATTTACAATATTTGGAGCTCTACAGTAATAACATGAGTGGACCAATTCCTAGTGAACTGGGGAACCTAACCAGCTTGGTGAGCTTGGATCTTTATTTGAATAGTTTTTCAGGTCTAATCCCAGGCACCTTGGGCAGGCTGTCAAAACTGCGATTCCTCCGGCTTAACAACAACAGCTTGGTGGGTCCGATTCCCATGTCTTTGACTAATATCTCTTCACTTCAAGTACTGGATCTATCAAATAATCGTCTCTCAGGAGTAGTTCCAGACAATGGCTCCTTTTCTTTATTCACTCCCATAAGTTTTGCTAACAACATGGATCTGTGTGGCCCAGTAACTGGTCGCCCCTGCCCAGGATCTCCTCCATTTTCACCTCCCCCACCTTTTGTCCCACCACCCCCAATTTCAACACCAGGAGGTAATAGTGCCACTGGGGCTATTGCTGGTGGAGTTGCCGCTGGTGCTGCTTTACTGTTTGCTGCTCCTGCAATTGCATTTGCATGGTGGCGCCGGAGGAAGCCGCAAGAATTTTTCTTTGATGTACCTGCGGAGGAGGATCCTGAAGTACATCTTGGGCAGCTCAAGAGGTTTTCTTTGCGAGAATTACAAGTTGCAACGGATAGTTTTAGTAACAAAAACATTCTGGGGAGAGGTGGATTTGGTAAGGTCTACAAGGGGCGCCTTGCAGATGGTTCGCTAGTCGCTGTGAAAAGACTGAAAGAAGAGCGCACCCCTGGTGGGGAGTTGCAGTTTCAAACTGAAGTAGAGATGATCAGCATGGCTGTGCATCGAAATCTTCTTCGGTTACGTGGGTTCTGTATGACACCAACTGAACGGTTACTTGTTTATCCTTACATGGCTAATGGGAGTGTTGCCTCATGTTTAAGAGAACGGCCGCCAAACCAACCACCTCTTGATTGGCCAACTCGGAAGCGAATTGCACTGGGATCTGCAAGGGGTCTTTCTTATTTGCATGATCACTGTGACCCGAAGATTATTCACCGTGATGTGAAAGCTGCAAACATTTTGCTGGATGAGGAGTTTGAGGCTGTTGTTGGAGACTTTGGTTTGGCTAAACTTATGGACTACAAAGACACCCACGTCACTACTGCTGTACGTGGCACAATTGGACATATAGCTCCAGAGTACCTGTCTACCGGGAAGTCATCTGAGAAAACTGATGTTTTCGGTTACGGTATCATGCTTCTGGAGCTTATTACTGGTCAGAGGGCTTTTGATCTTGCTCGCCTTGCAAATGATGATGATGTCATGTTGCTTGATTGGGTGAAAGGACTACTGAAGGAGAAAAAGCTAGAAATGCTGGTTGATCCTGATCTCCAGAGTAATTATGTAGAAGCTGAGGTAGAGCAGCTAATTCAAGTTGCACTGCTCTGCACACAAGGCTCCCCAATGGACCGGCCTAAGATGTCAGAAGTTGTAAGGATGCTTGAAGGTGATGGCTTGGCCGAAAGATGGGATGAGTGGCAAAAGGTCGAAGTGCTTCGCCAAGAAGTGGAGTTAGCTCCTCACCCGAATTCTGACTGGATTGTTGACTCAACAGAAAATTTGCATGCAGTTGAGTTATCCGGTCCAAGGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0003006 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004675 GO:0004888 GO:0005102 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005789 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006996 GO:0007030 GO:0007049 GO:0007154 GO:0007165 GO:0007166 GO:0007167 GO:0007178 GO:0007275 GO:0008150 GO:0008152 GO:0009555 GO:0009556 GO:0009719 GO:0009725 GO:0009741 GO:0009742 GO:0009755 GO:0009790 GO:0009791 GO:0009793 GO:0009838 GO:0009908 GO:0009987 GO:0010033 GO:0010152 GO:0010154 GO:0010227 GO:0010256 GO:0012505 GO:0014070 GO:0016020 GO:0016043 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019199 GO:0019538 GO:0019953 GO:0021700 GO:0022402 GO:0022414 GO:0023052 GO:0031984 GO:0032501 GO:0032502 GO:0032870 GO:0033612 GO:0033993 GO:0034293 GO:0036211 GO:0038023 GO:0042175 GO:0042221 GO:0042802 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043401 GO:0043412 GO:0043934 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044425 GO:0044432 GO:0044444 GO:0044446 GO:0044464 GO:0044703 GO:0046777 GO:0048229 GO:0048236 GO:0048316 GO:0048367 GO:0048437 GO:0048545 GO:0048608 GO:0048731 GO:0048856 GO:0048869 GO:0050789 GO:0050794 GO:0050896 GO:0051321 GO:0051704 GO:0051716 GO:0060089 GO:0061458 GO:0065007 GO:0070887 GO:0071310 GO:0071367 GO:0071383 GO:0071396 GO:0071407 GO:0071495 GO:0071704 GO:0071840 GO:0071944 GO:0090567 GO:0098827 GO:0099402 GO:0140096 GO:1901564 GO:1901700 GO:1901701 GO:1903046
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRRNT_2 LRR_1 LRR_8 Pkinase

Protein Analysis

627

Amino Acids

69.08

Weight (kDa)

5.52

Isoelectric Point (pI)

41.69

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 28 - 67 2.3e-10 Leucine rich repeat N-terminal domain
LRR_14 PF23598 81 - 175 3.8e-09 Leucine-rich repeat region
Pkinase PF00069 304 - 574 1e-42 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 306 - 577 5.4e-44 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1382
Acc36I ACCTGC 1 cut(s) 835
AccB1I GGYRCC 3 cut(s) 407, 789, 960
AccB7I CCANNNNNTGG 4 cut(s) 269, 554, 620, 1795
AccI GTMKAC 2 cut(s) 951, 1436
AciI CCGC 4 cut(s) 738, 803, 830, 1178
AcoI YGGCCR 3 cut(s) 1175, 1202, 1746
AcsI RAATTY 5 cut(s) 19, 283, 809, 1816, 1846
AcuI CTGAAG 3 cut(s) 864, 1062, 1601
AcyI GRCGYC 2 cut(s) 790, 961
AfaI GTAC 6 cut(s) 178, 510, 825, 849, 1398, 1430
AgsI TTSAA 6 cut(s) 382, 506, 690, 1037, 1661, 1733
AjiI CACGTC 1 cut(s) 1384
AjnI CCWGG 4 cut(s) 403, 634, 694, 1015
AjuI GAANNNNNNNTTGG 2 cut(s) 837, 869
Alw21I GWGCWC 1 cut(s) 303
Alw26I GTCTC 2 cut(s) 536, 1335
AlwNI CAGNNNCTG 1 cut(s) 620
AoxI GGCC 6 cut(s) 271, 610, 1175, 1202, 1700, 1746
ApeKI GCWGC 6 cut(s) 239, 746, 761, 859, 1298, 1651
ApoI RAATTY 5 cut(s) 19, 283, 809, 1816, 1846
Asp700I GAANNNNTTC 1 cut(s) 1782
AspLEI GCGC 3 cut(s) 792, 963, 1011
AspS9I GGNCC 7 cut(s) 114, 127, 323, 467, 611, 1696, 1871
AsuC2I CCSGG 1 cut(s) 1441
AsuHPI GGTGA 7 cut(s) 104, 373, 645, 1274, 1579, 1748, 1802
AvaII GGWCC 6 cut(s) 114, 127, 323, 467, 1696, 1871
BalI TGGCCA 1 cut(s) 1204
BamHI GGATCC 2 cut(s) 154, 838
BanI GGYRCC 3 cut(s) 407, 789, 960
BanII GRGCYC 1 cut(s) 303
Bbv12I GWGCWC 1 cut(s) 303
BbvCI CCTCAGC 1 cut(s) 1641
BbvI GCAGC 6 cut(s) 251, 733, 748, 871, 1285, 1663
BccI CCATC 3 cut(s) 965, 1733, 1749
BceAI ACGGC 1 cut(s) 1190
BcgI CGANNNNNNTGC 2 cut(s) 957, 991
BciT130I CCWGG 4 cut(s) 405, 636, 696, 1017
BclI TGATCA 2 cut(s) 1053, 1258
BcnI CCSGG 1 cut(s) 1441
BcoDI GTCTC 2 cut(s) 536, 1335
BfaI CTAG 3 cut(s) 333, 980, 1595
BfmI CTRYAG 1 cut(s) 304
BfoI RGCGCY 2 cut(s) 793, 964
BfuAI ACCTGC 1 cut(s) 835
BglI GCCNNNNNGGC 1 cut(s) 716
BisI GCNGC 9 cut(s) 240, 738, 747, 762, 803, 860, 1178, 1299, 1652
BlsI GCNGC 9 cut(s) 241, 739, 748, 763, 804, 861, 1179, 1300, 1653
BmcAI AGTACT 1 cut(s) 510
Bme1390I CCNGG 5 cut(s) 405, 636, 696, 1017, 1441
Bme18I GGWCC 6 cut(s) 114, 127, 323, 467, 1696, 1871
BmgBI CACGTC 1 cut(s) 1384
BmgT120I GGNCC 7 cut(s) 114, 127, 323, 467, 611, 1696, 1871
BmrFI CCNGG 5 cut(s) 405, 636, 696, 1017, 1441
BmrI ACTGGG 4 cut(s) 350, 608, 723, 1235
BmsI GCATC 3 cut(s) 85, 1078, 1716
BmuI ACTGGG 4 cut(s) 350, 608, 723, 1235
BpmI CTGGAG 3 cut(s) 1407, 1511, 1604
Bpu10I CCTNAGC 1 cut(s) 1641
BpuEI CTTGAG 2 cut(s) 263, 848
BpuMI CCSGG 1 cut(s) 1441
BsaAI YACGTR 3 cut(s) 180, 1091, 1400
BsaBI GATNNNNATC 1 cut(s) 1614
BsaHI GRCGYC 2 cut(s) 790, 961
BsaJI CCNNGG 5 cut(s) 403, 411, 634, 1015, 1874
BsaWI WCCGGW 1 cut(s) 1868
BsaXI ACNNNNNCTCC 4 cut(s) 542, 572, 1016, 1046
Bse118I RCCGGY 1 cut(s) 1698
Bse1I ACTGG 8 cut(s) 345, 516, 614, 625, 718, 1230, 1507, 1829
Bse8I GATNNNNATC 1 cut(s) 1614
BseBI CCWGG 4 cut(s) 405, 636, 696, 1017
BseDI CCNNGG 5 cut(s) 403, 411, 634, 1015, 1874
BseGI GGATG 5 cut(s) 52, 69, 1321, 1731, 1765
BseJI GATNNNNATC 1 cut(s) 1614
BseMII CTCAG 3 cut(s) 549, 1443, 1632
BseNI ACTGG 8 cut(s) 345, 516, 614, 625, 718, 1230, 1507, 1829
BseRI GAGGAG 4 cut(s) 633, 848, 1334, 1797
BseX3I CGGCCG 1 cut(s) 1175
BseXI GCAGC 6 cut(s) 251, 733, 748, 871, 1285, 1663
BsgI GTGCAG 1 cut(s) 1660
Bsh1285I CGRYCG 1 cut(s) 1178
BshFI GGCC 6 cut(s) 273, 612, 1177, 1204, 1702, 1748
BshNI GGYRCC 3 cut(s) 407, 789, 960
BsiEI CGRYCG 1 cut(s) 1178
BsiHKAI GWGCWC 1 cut(s) 303
BsiSI CCGG 5 cut(s) 442, 793, 1440, 1699, 1869
BslFI GGGAC 1 cut(s) 656
BsmAI GTCTC 2 cut(s) 536, 1335
BsmBI CGTCTC 1 cut(s) 536
BsmFI GGGAC 1 cut(s) 656
BsnI GGCC 6 cut(s) 273, 612, 1177, 1204, 1702, 1748
Bsp1286I GDGCHC 1 cut(s) 303
BspACI CCGC 4 cut(s) 738, 803, 830, 1178
BspANI GGCC 6 cut(s) 273, 612, 1177, 1204, 1702, 1748
BspCNI CTCAG 3 cut(s) 548, 1444, 1633
BspMI ACCTGC 1 cut(s) 835
BspQI GCTCTTC 1 cut(s) 999
BspT107I GGYRCC 3 cut(s) 407, 789, 960
BsrFI RCCGGY 1 cut(s) 1698
BsrI ACTGG 8 cut(s) 345, 516, 614, 625, 718, 1230, 1507, 1829
BssAI RCCGGY 1 cut(s) 1698
BssECI CCNNGG 5 cut(s) 403, 411, 634, 1015, 1874
BssNI GRCGYC 2 cut(s) 790, 961
BssT1I CCWWGG 2 cut(s) 411, 1874
Bst2UI CCWGG 4 cut(s) 405, 636, 696, 1017
Bst4CI ACNGT 6 cut(s) 308, 756, 1119, 1265, 1286, 1478
Bst6I CTCTTC 2 cut(s) 502, 999
BstACI GRCGYC 2 cut(s) 790, 961
BstBAI YACGTR 3 cut(s) 180, 1091, 1400
BstC8I GCNNGC 4 cut(s) 78, 419, 1528, 1854
BstDEI CTNAG 5 cut(s) 110, 535, 1452, 1641, 1704
BstENI CCTNNNNNAGG 1 cut(s) 415
BstF5I GGATG 5 cut(s) 52, 69, 1321, 1731, 1765
BstH2I RGCGCY 2 cut(s) 793, 964
BstHHI GCGC 3 cut(s) 792, 963, 1011
BstMAI GTCTC 2 cut(s) 536, 1335
BstMCI CGRYCG 1 cut(s) 1178
BstNI CCWGG 4 cut(s) 405, 636, 696, 1017
BstNSI RCATGY 2 cut(s) 198, 1856
BstSCI CCNGG 5 cut(s) 403, 634, 694, 1015, 1439
BstSFI CTRYAG 1 cut(s) 304
BstV1I GCAGC 6 cut(s) 251, 733, 748, 871, 1285, 1663
BstX2I RGATCY 7 cut(s) 154, 370, 514, 601, 638, 838, 1229
BstYI RGATCY 7 cut(s) 154, 370, 514, 601, 638, 838, 1229
BstZI CGGCCG 1 cut(s) 1175
BsuRI GGCC 6 cut(s) 273, 612, 1177, 1204, 1702, 1748
BtrI CACGTC 1 cut(s) 1384
BtsCI GGATG 5 cut(s) 52, 69, 1321, 1731, 1765
BtsI GCAGTG 1 cut(s) 1667
BtsIMutI CAGTG 4 cut(s) 711, 1223, 1261, 1667
BveI ACCTGC 1 cut(s) 835
Cac8I GCNNGC 4 cut(s) 78, 419, 1528, 1854
CaiI CAGNNNCTG 1 cut(s) 620
CfoI GCGC 3 cut(s) 792, 963, 1011
Cfr10I RCCGGY 1 cut(s) 1698
Cfr13I GGNCC 7 cut(s) 114, 127, 323, 467, 611, 1696, 1871
CseI GACGC 1 cut(s) 202
Csp6I GTAC 6 cut(s) 177, 509, 824, 848, 1397, 1429
CviQI GTAC 6 cut(s) 177, 509, 824, 848, 1397, 1429
DdeI CTNAG 5 cut(s) 110, 535, 1452, 1641, 1704
DinI GGCGCC 2 cut(s) 791, 962
DrdI GACNNNNNNGTC 1 cut(s) 1382
DseDI GACNNNNNNGTC 1 cut(s) 1382
EaeI YGGCCR 3 cut(s) 1175, 1202, 1746
EagI CGGCCG 1 cut(s) 1175
Eam1104I CTCTTC 2 cut(s) 502, 999
EarI CTCTTC 2 cut(s) 502, 999
Ecl136II GAGCTC 1 cut(s) 301
EclXI CGGCCG 1 cut(s) 1175
Eco130I CCWWGG 2 cut(s) 411, 1874
Eco24I GRGCYC 1 cut(s) 303
Eco47I GGWCC 6 cut(s) 114, 127, 323, 467, 1696, 1871
Eco52I CGGCCG 1 cut(s) 1175
Eco53kI GAGCTC 1 cut(s) 301
Eco57I CTGAAG 3 cut(s) 864, 1062, 1601
EcoICRI GAGCTC 1 cut(s) 301
EcoNI CCTNNNNNAGG 1 cut(s) 415
EcoO109I RGGNCCY 1 cut(s) 127
EcoRI GAATTC 2 cut(s) 19, 1816
EcoRII CCWGG 4 cut(s) 403, 634, 694, 1015
EcoT14I CCWWGG 2 cut(s) 411, 1874
EcoT38I GRGCYC 1 cut(s) 303
EgeI GGCGCC 2 cut(s) 791, 962
EheI GGCGCC 2 cut(s) 791, 962
ErhI CCWWGG 2 cut(s) 411, 1874
Esp3I CGTCTC 1 cut(s) 536
FalI AAGNNNNNCTT 2 cut(s) 837, 869
FaqI GGGAC 1 cut(s) 656
FbaI TGATCA 2 cut(s) 1053, 1258
FblI GTMKAC 2 cut(s) 951, 1436
Fnu4HI GCNGC 9 cut(s) 240, 738, 747, 762, 803, 860, 1178, 1299, 1652
FokI GGATG 5 cut(s) 39, 76, 1328, 1738, 1772
FriOI GRGCYC 1 cut(s) 303
Fsp4HI GCNGC 9 cut(s) 240, 738, 747, 762, 803, 860, 1178, 1299, 1652
FspBI CTAG 3 cut(s) 333, 980, 1595
GlaI GCGC 3 cut(s) 791, 962, 1010
GluI GCNGC 9 cut(s) 240, 738, 747, 762, 803, 860, 1178, 1299, 1652
GsuI CTGGAG 3 cut(s) 1407, 1511, 1604
HaeII RGCGCY 2 cut(s) 793, 964
HaeIII GGCC 6 cut(s) 273, 612, 1177, 1204, 1702, 1748
HapII CCGG 5 cut(s) 442, 793, 1440, 1699, 1869
HgaI GACGC 1 cut(s) 202
HhaI GCGC 3 cut(s) 792, 963, 1011
Hin1I GRCGYC 2 cut(s) 790, 961
Hin6I GCGC 3 cut(s) 790, 961, 1009
HinP1I GCGC 3 cut(s) 790, 961, 1009
HincII GTYRAC 2 cut(s) 254, 1834
HindII GTYRAC 2 cut(s) 254, 1834
HinfI GANTC 3 cut(s) 435, 472, 1835
HpaII CCGG 5 cut(s) 442, 793, 1440, 1699, 1869
HphI GGTGA 7 cut(s) 104, 373, 645, 1274, 1579, 1748, 1802
Hpy166II GTNNAC 7 cut(s) 169, 254, 323, 338, 952, 1437, 1834
Hpy188I TCNGA 6 cut(s) 471, 1212, 1453, 1509, 1714, 1822
Hpy8I GTNNAC 7 cut(s) 169, 254, 323, 338, 952, 1437, 1834
HpyAV CCTTC 4 cut(s) 83, 284, 1576, 1727
HpyCH4III ACNGT 6 cut(s) 308, 756, 1119, 1265, 1286, 1478
HpyCH4IV ACGT 4 cut(s) 179, 1090, 1383, 1399
HpyF3I CTNAG 5 cut(s) 110, 535, 1452, 1641, 1704
HpySE526I ACGT 4 cut(s) 179, 1090, 1383, 1399
Hsp92I GRCGYC 2 cut(s) 790, 961
HspAI GCGC 3 cut(s) 790, 961, 1009
KasI GGCGCC 2 cut(s) 789, 960
Ksp22I TGATCA 2 cut(s) 1053, 1258
LguI GCTCTTC 1 cut(s) 999
LmnI GCTCC 7 cut(s) 298, 563, 769, 1426, 1492, 1691, 1810
Lsp1109I GCAGC 6 cut(s) 251, 733, 748, 871, 1285, 1663
LweI GCATC 3 cut(s) 85, 1078, 1716
MaeI CTAG 3 cut(s) 333, 980, 1595
MaeII ACGT 4 cut(s) 179, 1090, 1383, 1399
MaeIII GTNAC 8 cut(s) 190, 616, 911, 1086, 1119, 1265, 1384, 1472
MboII GAAGA 5 cut(s) 489, 1016, 1070, 1073, 1285
MfeI CAATTG 2 cut(s) 771, 1407
MflI RGATCY 7 cut(s) 154, 370, 514, 601, 638, 838, 1229
MhlI GDGCHC 1 cut(s) 303
MlsI TGGCCA 1 cut(s) 1204
MluNI TGGCCA 1 cut(s) 1204
Mly113I GGCGCC 2 cut(s) 790, 961
MlyI GAGTC 1 cut(s) 1829
MmeI TCCRAC 1 cut(s) 1318
Mox20I TGGCCA 1 cut(s) 1204
MroXI GAANNNNTTC 1 cut(s) 1782
MscI TGGCCA 1 cut(s) 1204
MseI TTAA 2 cut(s) 447, 1166
MslI CAYNNNNRTG 3 cut(s) 781, 1064, 1287
Msp20I TGGCCA 1 cut(s) 1204
MspA1I CMGCKG 1 cut(s) 740
MspI CCGG 5 cut(s) 442, 793, 1440, 1699, 1869
MspR9I CCNGG 5 cut(s) 405, 636, 696, 1017, 1441
MunI CAATTG 2 cut(s) 771, 1407
MvaI CCWGG 4 cut(s) 405, 636, 696, 1017
NarI GGCGCC 2 cut(s) 790, 961
NciI CCSGG 1 cut(s) 1441
NmuCI GTSAC 2 cut(s) 1265, 1384
NspI RCATGY 2 cut(s) 198, 1856
PaeI GCATGC 1 cut(s) 1856
PciSI GCTCTTC 1 cut(s) 999
PdmI GAANNNNTTC 1 cut(s) 1782
PfeI GAWTC 2 cut(s) 435, 472
PflMI CCANNNNNTGG 4 cut(s) 269, 554, 620, 1795
PkrI GCNGC 9 cut(s) 241, 739, 748, 763, 804, 861, 1179, 1300, 1653
PleI GAGTC 1 cut(s) 1829
PluTI GGCGCC 2 cut(s) 793, 964
PpsI GAGTC 1 cut(s) 1829
Ppu21I YACGTR 3 cut(s) 180, 1091, 1400
PpuMI RGGWCCY 1 cut(s) 127
Psp124BI GAGCTC 1 cut(s) 303
Psp5II RGGWCCY 1 cut(s) 127
Psp6I CCWGG 4 cut(s) 403, 634, 694, 1015
PspGI CCWGG 4 cut(s) 403, 634, 694, 1015
PspPI GGNCC 7 cut(s) 114, 127, 323, 467, 611, 1696, 1871
PspPPI RGGWCCY 1 cut(s) 127
PstNI CAGNNNCTG 1 cut(s) 620
PsuI RGATCY 7 cut(s) 154, 370, 514, 601, 638, 838, 1229
RsaI GTAC 6 cut(s) 178, 510, 825, 849, 1398, 1430
RsaNI GTAC 6 cut(s) 177, 509, 824, 848, 1397, 1429
RseI CAYNNNNRTG 3 cut(s) 781, 1064, 1287
SacI GAGCTC 1 cut(s) 303
SapI GCTCTTC 1 cut(s) 999
SaqAI TTAA 2 cut(s) 447, 1166
SatI GCNGC 9 cut(s) 240, 738, 747, 762, 803, 860, 1178, 1299, 1652
Sau96I GGNCC 7 cut(s) 114, 127, 323, 467, 611, 1696, 1871
ScaI AGTACT 1 cut(s) 510
SchI GAGTC 1 cut(s) 1829
ScrFI CCNGG 5 cut(s) 405, 636, 696, 1017, 1441
SduI GDGCHC 1 cut(s) 303
SfaNI GCATC 3 cut(s) 85, 1078, 1716
SfcI CTRYAG 1 cut(s) 304
SfoI GGCGCC 2 cut(s) 791, 962
SinI GGWCC 6 cut(s) 114, 127, 323, 467, 1696, 1871
SmiMI CAYNNNNRTG 3 cut(s) 781, 1064, 1287
SmlI CTYRAG 2 cut(s) 278, 863
SmoI CTYRAG 2 cut(s) 278, 863
SphI GCATGC 1 cut(s) 1856
SsiI CCGC 4 cut(s) 738, 803, 830, 1178
SspDI GGCGCC 2 cut(s) 789, 960
SspI AATATT 1 cut(s) 293
SspMI CTAG 3 cut(s) 333, 980, 1595
SstI GAGCTC 1 cut(s) 303
StyD4I CCNGG 5 cut(s) 403, 634, 694, 1015, 1439
StyI CCWWGG 2 cut(s) 411, 1874
TaaI ACNGT 6 cut(s) 308, 756, 1119, 1265, 1286, 1478
TaiI ACGT 4 cut(s) 182, 1093, 1386, 1402
TaqI TCGA 2 cut(s) 1072, 1776
TatI WGTACW 2 cut(s) 508, 847
TauI GCSGC 3 cut(s) 740, 805, 1180
TfiI GAWTC 2 cut(s) 435, 472
Tru1I TTAA 2 cut(s) 447, 1166
Tru9I TTAA 2 cut(s) 447, 1166
TscAI CASTG 4 cut(s) 718, 1230, 1268, 1674
TseFI GTSAC 2 cut(s) 1265, 1384
TseI GCWGC 6 cut(s) 239, 746, 761, 859, 1298, 1651
Tsp45I GTSAC 2 cut(s) 1265, 1384
TspDTI ATGAA 3 cut(s) 28, 176, 219
TspGWI ACGGA 1 cut(s) 914
TspRI CASTG 4 cut(s) 718, 1230, 1268, 1674
Van91I CCANNNNNTGG 4 cut(s) 269, 554, 620, 1795
VpaK11BI GGWCC 6 cut(s) 114, 127, 323, 467, 1696, 1871
XagI CCTNNNNNAGG 1 cut(s) 415
XapI RAATTY 5 cut(s) 19, 283, 809, 1816, 1846
XceI RCATGY 2 cut(s) 198, 1856
XcmI CCANNNNNNNNNTGG 1 cut(s) 1197
XmiI GTMKAC 2 cut(s) 951, 1436
XmnI GAANNNNTTC 1 cut(s) 1782
XspI CTAG 3 cut(s) 333, 980, 1595
ZrmI AGTACT 1 cut(s) 510
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.