Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr10

Orthogroup ID

OG0003080

Physical Location & Seq

Genomic Coordinates Reverse (-)

28332764 .. 28343959

Gene Structure 11196 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD10G1188400.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3294 bp

ATGGCCAAGCCAGTGACCTTTGTTGTTGGTTCTCATGTTTGGGTTGAAAAACCAGAATCAGTTTGGATTGACGGTGAAGTACTAAATATTAAGGGTGATGACGCTGAGATTCAAACTAGTGATGGGAATAAGGTTGTTGCAAAGCTGTCAAAAATATACCCAAAAGATACAGAAACTCCTCCTGATGGAGTTGATGACATGACTAAGCTAGCATACTTGCATGAACCTGGAGTGCTTCACAATTTGGCAACTAGATATGAGATAAATGAAATTTATACTTACACTGGAAACATTCTCATCGCCATCAATCCATTCCAAAGCCTCTCACATCTGTATGATGCTCATATGATGGAACGGTATAATGGAGTGCCATTTGGAGAACTGAGCCCTCATGTTTTTGCAATAGCAGATGCTGCATACAGGGAAATGATTACTGAGGGAAAAGGCAACTCGATTCTGGTTAGTGGGGAAAGCGGAGCTGGTAAGACTGAAACAACTAAAATGCTTATGCGCTACCTTGCCTATTTGGGTGGTAATGCTGCAGCTGAAGGGCGGAGTGTTGAACAGAAAGTTTTAGAATCAAATCCAGTTCTTGAAGCATTTGGCAATGCTAAGACTGTTAGAAATAACAATTCCAGCCGCTTTGGGAAATTTGTCGAGATTCAATTTGATAAACGTGGTAGAATATCAGGGGCAGCCATTAGAACATATCTCTTAGAGAGATCTCGTGTTTGCCAGATTTCGGATTCCGAGCGTAACTATCACTGTTTTTATCTCCTTTGTGCTGCTCCACCTCAGGAAACAGAGAAATATAAGTTGGGAGAACCTAAATTATATCACTATCTGAATCAATCAAATTGCTATGAACTTGATGGAATAAGTGATCAACATGATTATCTTGCCACTCGGAGAGGCATGGATGTTGTTGGAATAAATGCAGTAGAACAGGAGGCTATTTTCAGAGTTGTAGCTGCAATTCTTCACCTTGGTAATATAGATTTTGCCAATGGGGAAGATAATGACTCATCTGTTCTGAAAAATGATGAATCCCTTTTTCATCTTCAAATGACAGCAGAACTTCTCATGTGTAATCCTCGGGCATTGGAAGATGCACTGTGTAAGCGTGTAATGGTTACTCCAGAAGAAATTATTAAAAGAAGTCTTGATCCCCTTGGCGCAACAGTTAGCAGGGATGGATTGGCCAAAACTATATATTCTCGTTTGTTTGACTGGTTGGTGGATAAGATCAATTTCTCAATTGGACAAGACCCTAGCTCAAAATGTCTGATTGGGGTTCTTGATATATATGGTTTTGAAAGCTTCAAAACTAACAGTTTTGAGCAGTTCTGTATTAATTACACTAATGAAAAGCTGCAACAACATTTCAACAAGCATGTATTCAAGACGGAACAAGAGGAATACACTAAAGAAGAAATAGATTGGAGCTACATAGAATTTGTTGATAATAAAGATGTCCTGGATCTCATTGAACAGAAGAAAGGTGGGATTATTGCTCTACTTGATGAAGCTTGTATGTTTCCAAAATCAACTCATGAAACATTTTCAACGAAGCTGTATCAGACATTCAAAGATCACAAACGCTTCATGAAGCCAAAACTGACCCGCTCAGATTTCACCATTGTTCATTATGCAGGAGAAGTACAATATCAGTCTGATCAATTCCTAGACAAAAATAAAGACTATATTGTTCCTGAACATCGAGATTTGTTGAGTGCTTCAACATGTTCTTTTGTAGCAGGCCTTTTCCCTCCACTTACAGAGGAGGCAACCAAATCTTCCAAGTTCTCATCCATCAGTTCTCGTTTTAAGCTACAACTCCAACAATTGATGGAAATACTAAATTTTACAGAACCCCATTACATAAGATGTATAAAGCCGAATAGTGTCTTAAAGCCTGCTATATTCGAGAATGTTAATGTCTTGCAACAGCTACGTTCTGGTGGTGTTTTAGAGGCTGTGCGAATAAAATGTGCTGGATACCCTACTTACAGGAGTTTTTCTGAATTTTTAACTCGATTTCGTGTCCTGGCCCCGGAAGTTTTAAAAATGGATTGTCCTGAAAATGAAGCCAGCGAAAAGATTCTGGTGAAGATGGGGCTTAAAGATTATCAGATAGGGAAAACAAAGGTTTTCCTAAGAGCTGGTCAGATGGCTGAGCTAGATGCAAAGAGAATACTCTTACTCGGTGACTCAGCTAAGGTGATTCAAACCCGGGGCAGAACTCGTATTACTCGTAAGAAGTATGTTTCTACACTGGAGGCTTCTATTTGCGTACAATCATTTTGTAAAGGAGAACTGGCTCGCAAGTTATTGAAGCTCAAGAAGCGGGAGATTTCTGCAGTTAAAATTCAGAAGACTGCCCGTAAACGCCTGGCGAGAAAAGATTATCTCAGAATAAAGTTCTCTTCGACTATCTTACAGGCAGGCGTGCGGGCAATGGCTGCCCGTGATGAATTTAGATATAGGGTTAATGCGGCAATTATTATTCAGACAGGTTTACGGGCAATGGTTGCTCGTGAAGATTTTAGATGTAAAGTTAATGCGGCAGTTATTCAGACTGACTTGGAAGCAAAAGGAGAAGAAACAACGAAGTTGGAGTCCTCTGTGCAAGCTAGTACTGACTTGGAAAAAGAAAAGGTTAAAGAGGCAACAAATGCGGAGTCCCCCCTGCTTACTAATGTAAGCGGAGGTGTTGAAATAGATGTGTTGTCTAAATGTCAGGTTGCACAGGTAGAAACTGAAGACGCATGCTCTATGACCCAAGATCTTTCAAGTCCTGATCAAAATGCTGAAAGAGTTAAAACTCTTACTGCAGAGGTTGAAAGTCTGAAGGGCATGTTACAAGCAGAAAAACAAAGAGCCAATGAGTGTGAAAGGAGGTTTGTGGAAGCTCGGGTATCAAGTGAGGAAGGACGTAAAAAATTAGAGGAAACTGAAAGAATAGTTCATCAACTTCAGGAATCTTTGAACAGGATGATATATTGCATGTCAAACCAAGTTTCGGAGCTGAAAACAATCTTATCTACCGCGTCCAAGTCAAGTTCAACAACTTCAGGACCTTTTGTTAGACATGAAGGGTTTGATAGCATTTCCAGTAACTCTGAATGTTCATCCGCCGACTCAGATTTCACTTTTCCAGCTCCAGCTACAAGTTCAGCTAACCTTTCCTCTCTCGGCCCCAACTCTATCCAGCTTATAGTTCAGGACGTTTCAGGCATAGAAGTTTCAGGATCTGAAAGTGAGAAGGAGGGGGCTTTTGATGACTTCTTCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003774 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005856 GO:0006928 GO:0008150 GO:0009987 GO:0015629 GO:0016459 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0017111 GO:0030029 GO:0030048 GO:0032991 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0044422 GO:0044424 GO:0044430 GO:0044444 GO:0044446 GO:0044464

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

IQ Myosin_N Myosin_head

Protein Analysis

1098

Amino Acids

123.27

Weight (kDa)

6.05

Isoelectric Point (pI)

43.92

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Myosin_N	PF02736	9 - 52	1.5e-09	Myosin N-terminal SH3-like domain
Myosin_head	PF00063	64 - 720	3.9e-249	Myosin head (motor domain)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003080)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G58160 AT3G58160 AT3G58160 AT3G58160 AT3G58160
fragaria_vesca	FvH4_2g22050 FvH4_2g22050 FvH4_2g22050 FvH4_2g22050 FvH4_2g22050 FvH4_2g22050
malus_domestica	MD05G1201700.v1.1 MD10G1188400.v1.1
prunus_persica	Prupe.8G228100_v2.0.a1 Prupe.8G228100_v2.0.a1 Prupe.8G228100_v2.0.a1 Prupe.8G228100_v2.0.a1 Prupe.8G228100_v2.0.a1 Prupe.8G228100_v2.0.a1 Prupe.8G228100_v2.0.a1 Prupe.8G228100_v2.0.a1 Prupe.8G228100_v2.0.a1 Prupe.8G228100_v2.0.a1 Prupe.8G228100_v2.0.a1 Prupe.8G228100_v2.0.a1
pyrus_communis	pycom10g16280
rosa_chinensis	RchiOBHm_Chr6g0288911
rosa_laevigata	RLG00000012349
rosa_multiflora	Rmu_sc0005314.1_g000002
rosa_roxburghii	Rroxscaffold_7G00179750
rosa_rugosa	Rorug06G0199100 Rorug06G0199200
rosa_samantha	Rh6AG310700 Rh6BG317200 Rh6CG323900 Rh6DG309600
rosa_wichuraiana	Rw6G026860

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccBSI	CCGCTC	1 cut(s)	1626
AccII	CGCG	1 cut(s)	3050
AclWI	GGATC	3 cut(s)	1160, 1488, 3259
AcoI	YGGCCR	2 cut(s)	3, 1200
AcsI	RAATTY	7 cut(s)	270, 650, 1454, 1861, 2024, 2367, 2474
AcuI	CTGAAG	5 cut(s)	567, 2781, 2870, 2960, 3057
AfaI	GTAC	4 cut(s)	81, 1662, 2295, 2638
AfiI	CCNNNNNNNGG	4 cut(s)	185, 742, 2053, 3022
AflIII	ACRYGT	1 cut(s)	1742
AhlI	ACTAGT	1 cut(s)	116
AjnI	CCWGG	4 cut(s)	226, 1476, 2046, 2391
AjuI	GAANNNNNNNTTGG	2 cut(s)	800, 832
AlwI	GGATC	3 cut(s)	1160, 1488, 3259
AlwNI	CAGNNNCTG	2 cut(s)	413, 3254
Ama87I	CYCGRG	3 cut(s)	1095, 2232, 2913
AoxI	GGCC	5 cut(s)	3, 1200, 1759, 2049, 3196
ApeKI	GCWGC	8 cut(s)	413, 539, 542, 695, 785, 971, 1372, 2462
ApoI	RAATTY	7 cut(s)	270, 650, 1454, 1861, 2024, 2367, 2474
ArsI	GACNNNNNNTTYG	4 cut(s)	2603, 2635, 2666, 2698
AseI	ATTAAT	1 cut(s)	1353
Asp700I	GAANNNNTTC	1 cut(s)	2100
AspLEI	GCGC	2 cut(s)	513, 1178
AspS9I	GGNCC	3 cut(s)	2050, 3077, 3197
AsuC2I	CCSGG	3 cut(s)	2054, 2233, 2234
AsuHPI	GGTGA	7 cut(s)	86, 107, 974, 1627, 2119, 2219, 2233
AsuNHI	GCTAGC	1 cut(s)	208
AvaI	CYCGRG	3 cut(s)	1095, 2232, 2913
AvaII	GGWCC	1 cut(s)	3077
AxyI	CCTNAGG	1 cut(s)	795
BalI	TGGCCA	2 cut(s)	5, 1202
BanII	GRGCYC	1 cut(s)	389
BauI	CACGAG	2 cut(s)	726, 2535
BbsI	GAAGAC	2 cut(s)	2381, 2769
BbvI	GCAGC	8 cut(s)	400, 526, 554, 707, 772, 958, 1359, 2449
BciT130I	CCWGG	4 cut(s)	228, 1478, 2048, 2393
BciVI	GTATCC	1 cut(s)	1991
BclI	TGATCA	3 cut(s)	883, 1675, 2800
BcnI	CCSGG	3 cut(s)	2054, 2233, 2234
BcuI	ACTAGT	1 cut(s)	116
BfaI	CTAG	7 cut(s)	117, 209, 252, 1272, 1685, 2180, 2634
BfmI	CTRYAG	3 cut(s)	540, 2358, 2832
BfuI	GTATCC	1 cut(s)	1991
BglII	AGATCT	2 cut(s)	722, 2785
BlpI	GCTNAGC	1 cut(s)	2175
BmcAI	AGTACT	2 cut(s)	81, 2638
Bme1390I	CCNGG	7 cut(s)	228, 1478, 2048, 2054, 2233, 2234, 2393
Bme18I	GGWCC	1 cut(s)	3077
BmeT110I	CYCGRG	3 cut(s)	1095, 2232, 2913
BmgT120I	GGNCC	3 cut(s)	2050, 3077, 3197
BmiI	GGNNCC	2 cut(s)	2052, 3199
BmrFI	CCNGG	7 cut(s)	228, 1478, 2048, 2054, 2233, 2234, 2393
BmsI	GCATC	4 cut(s)	328, 400, 1099, 2173
BmtI	GCTAGC	1 cut(s)	212
BpiI	GAAGAC	2 cut(s)	2381, 2769
BpmI	CTGGAG	4 cut(s)	249, 1122, 2297, 3147
Bpu10I	CCTNAGC	1 cut(s)	2217
Bpu1102I	GCTNAGC	1 cut(s)	2175
BpuEI	CTTGAG	1 cut(s)	2324
BpuMI	CCSGG	3 cut(s)	2054, 2233, 2234
BsaJI	CCNNGG	6 cut(s)	985, 1094, 1171, 2052, 2232, 2233
BsaXI	ACNNNNNCTCC	2 cut(s)	160, 190
Bsc4I	CCNNNNNNNGG	4 cut(s)	185, 742, 2053, 3022
Bse1I	ACTGG	7 cut(s)	11, 289, 587, 1235, 2280, 2322, 3114
Bse21I	CCTNAGG	1 cut(s)	795
Bse3DI	GCAATG	3 cut(s)	613, 2463, 2532
BseBI	CCWGG	4 cut(s)	228, 1478, 2048, 2393
BseDI	CCNNGG	6 cut(s)	985, 1094, 1171, 2052, 2232, 2233
BseGI	GGATG	5 cut(s)	925, 1198, 1808, 3000, 3131
BseLI	CCNNNNNNNGG	4 cut(s)	185, 742, 2053, 3022
BseMI	GCAATG	3 cut(s)	613, 2463, 2532
BseMII	CTCAG	9 cut(s)	96, 374, 426, 809, 1641, 2166, 2226, 2425, 3156
BseNI	ACTGG	7 cut(s)	11, 289, 587, 1235, 2280, 2322, 3114
BseRI	GAGGAG	2 cut(s)	168, 1796
BseXI	GCAGC	8 cut(s)	400, 526, 554, 707, 772, 958, 1359, 2449
Bsh1236I	CGCG	1 cut(s)	3050
BshFI	GGCC	5 cut(s)	5, 1202, 1761, 2051, 3198
BsiHKCI	CYCGRG	3 cut(s)	1095, 2232, 2913
BsiSI	CCGG	2 cut(s)	2054, 2233
BslFI	GGGAC	1 cut(s)	2668
BslI	CCNNNNNNNGG	4 cut(s)	185, 742, 2053, 3022
BsmFI	GGGAC	1 cut(s)	2668
BsnI	GGCC	5 cut(s)	5, 1202, 1761, 2051, 3198
BsoBI	CYCGRG	3 cut(s)	1095, 2232, 2913
Bsp1286I	GDGCHC	1 cut(s)	389
Bsp1720I	GCTNAGC	1 cut(s)	2175
BspANI	GGCC	5 cut(s)	5, 1202, 1761, 2051, 3198
BspCNI	CTCAG	9 cut(s)	97, 375, 427, 808, 1640, 2167, 2225, 2424, 3155
BspFNI	CGCG	1 cut(s)	3050
BspHI	TCATGA	2 cut(s)	1552, 1605
BspLI	GGNNCC	2 cut(s)	2052, 3199
BspMAI	CTGCAG	3 cut(s)	544, 2362, 2836
BspOI	GCTAGC	1 cut(s)	212
BspPI	GGATC	3 cut(s)	1160, 1488, 3259
BsrBI	CCGCTC	1 cut(s)	1626
BsrDI	GCAATG	3 cut(s)	613, 2463, 2532
BsrI	ACTGG	7 cut(s)	11, 289, 587, 1235, 2280, 2322, 3114
BssECI	CCNNGG	6 cut(s)	985, 1094, 1171, 2052, 2232, 2233
BssSI	CACGAG	2 cut(s)	726, 2535
BssT1I	CCWWGG	2 cut(s)	985, 1171
Bst2BI	CACGAG	2 cut(s)	726, 2535
Bst2UI	CCWGG	4 cut(s)	228, 1478, 2048, 2393
Bst4CI	ACNGT	7 cut(s)	74, 357, 619, 767, 1116, 1183, 1334
Bst6I	CTCTTC	1 cut(s)	2431
BstAPI	GCANNNNNTGC	4 cut(s)	413, 2462, 2531, 2675
BstF5I	GGATG	5 cut(s)	925, 1198, 1808, 3000, 3131
BstFNI	CGCG	1 cut(s)	3050
BstHHI	GCGC	2 cut(s)	513, 1178
BstMWI	GCNNNNNNNGC	5 cut(s)	413, 2344, 2462, 2531, 2675
BstNI	CCWGG	4 cut(s)	228, 1478, 2048, 2393
BstNSI	RCATGY	5 cut(s)	1397, 1746, 2772, 2860, 3010
BstSCI	CCNGG	7 cut(s)	226, 1476, 2046, 2052, 2231, 2232, 2391
BstSFI	CTRYAG	3 cut(s)	540, 2358, 2832
BstUI	CGCG	1 cut(s)	3050
BstV1I	GCAGC	8 cut(s)	400, 526, 554, 707, 772, 958, 1359, 2449
BstV2I	GAAGAC	2 cut(s)	2381, 2769
BstX2I	RGATCY	4 cut(s)	722, 1480, 2785, 3251
BstYI	RGATCY	4 cut(s)	722, 1480, 2785, 3251
Bsu36I	CCTNAGG	1 cut(s)	795
BsuI	GTATCC	1 cut(s)	1991
BsuRI	GGCC	5 cut(s)	5, 1202, 1761, 2051, 3198
BtgZI	GCGATG	1 cut(s)	283
BtsCI	GGATG	5 cut(s)	925, 1198, 1808, 3000, 3131
BtsIMutI	CAGTG	5 cut(s)	18, 282, 763, 1112, 2273
CaiI	CAGNNNCTG	2 cut(s)	413, 3254
CciI	TCATGA	2 cut(s)	1552, 1605
CfoI	GCGC	2 cut(s)	513, 1178
Cfr13I	GGNCC	3 cut(s)	2050, 3077, 3197
Cfr9I	CCCGGG	1 cut(s)	2232
CseI	GACGC	3 cut(s)	110, 2774, 3039
Csp6I	GTAC	4 cut(s)	80, 1661, 2294, 2637
CviQI	GTAC	4 cut(s)	80, 1661, 2294, 2637
DraI	TTTAAA	1 cut(s)	2064
EaeI	YGGCCR	2 cut(s)	3, 1200
Eam1104I	CTCTTC	1 cut(s)	2431
EarI	CTCTTC	1 cut(s)	2431
EciI	GGCGGA	2 cut(s)	568, 3124
Eco130I	CCWWGG	2 cut(s)	985, 1171
Eco147I	AGGCCT	1 cut(s)	1761
Eco24I	GRGCYC	1 cut(s)	389
Eco47I	GGWCC	1 cut(s)	3077
Eco57I	CTGAAG	5 cut(s)	567, 2781, 2870, 2960, 3057
Eco81I	CCTNAGG	1 cut(s)	795
Eco88I	CYCGRG	3 cut(s)	1095, 2232, 2913
EcoO109I	RGGNCCY	1 cut(s)	3077
EcoRII	CCWGG	4 cut(s)	226, 1476, 2046, 2391
EcoT14I	CCWWGG	2 cut(s)	985, 1171
EcoT38I	GRGCYC	1 cut(s)	389
ErhI	CCWWGG	2 cut(s)	985, 1171
FaqI	GGGAC	1 cut(s)	2668
FauI	CCCGC	3 cut(s)	1631, 2340, 2445
FauNDI	CATATG	1 cut(s)	345
FbaI	TGATCA	3 cut(s)	883, 1675, 2800
FokI	GGATG	5 cut(s)	932, 1205, 1795, 3007, 3118
FriOI	GRGCYC	1 cut(s)	389
FspBI	CTAG	7 cut(s)	117, 209, 252, 1272, 1685, 2180, 2634
GlaI	GCGC	2 cut(s)	512, 1177
GsuI	CTGGAG	4 cut(s)	249, 1122, 2297, 3147
HaeIII	GGCC	5 cut(s)	5, 1202, 1761, 2051, 3198
HapII	CCGG	2 cut(s)	2054, 2233
HgaI	GACGC	3 cut(s)	110, 2774, 3039
HhaI	GCGC	2 cut(s)	513, 1178
Hin6I	GCGC	2 cut(s)	511, 1176
HinP1I	GCGC	2 cut(s)	511, 1176
HindIII	AAGCTT	2 cut(s)	1318, 1527
HpaII	CCGG	2 cut(s)	2054, 2233
HphI	GGTGA	7 cut(s)	86, 107, 974, 1627, 2119, 2219, 2233
Hpy166II	GTNNAC	2 cut(s)	2387, 2519
Hpy8I	GTNNAC	2 cut(s)	2387, 2519
HpyAV	CCTTC	5 cut(s)	542, 2845, 2924, 3089, 3259
HpyCH4III	ACNGT	7 cut(s)	74, 357, 619, 767, 1116, 1183, 1334
HpyCH4IV	ACGT	4 cut(s)	676, 1954, 2935, 3228
HpyF10VI	GCNNNNNNNGC	5 cut(s)	413, 2344, 2462, 2531, 2675
HpySE526I	ACGT	4 cut(s)	676, 1954, 2935, 3228
HspAI	GCGC	2 cut(s)	511, 1176
Ksp22I	TGATCA	3 cut(s)	883, 1675, 2800
LmnI	GCTCC	5 cut(s)	476, 793, 1443, 3025, 3166
Lsp1109I	GCAGC	8 cut(s)	400, 526, 554, 707, 772, 958, 1359, 2449
LweI	GCATC	4 cut(s)	328, 400, 1099, 2173
MaeI	CTAG	7 cut(s)	117, 209, 252, 1272, 1685, 2180, 2634
MaeII	ACGT	4 cut(s)	676, 1954, 2935, 3228
MaeIII	GTNAC	6 cut(s)	13, 755, 1132, 2207, 2859, 3116
MbiI	CCGCTC	1 cut(s)	1626
MfeI	CAATTG	2 cut(s)	1257, 1844
MflI	RGATCY	4 cut(s)	722, 1480, 2785, 3251
MhlI	GDGCHC	1 cut(s)	389
MlsI	TGGCCA	2 cut(s)	5, 1202
MluNI	TGGCCA	2 cut(s)	5, 1202
MlyI	GAGTC	5 cut(s)	1016, 2204, 2627, 2690, 3134
MmeI	TCCRAC	3 cut(s)	907, 1864, 2595
Mox20I	TGGCCA	2 cut(s)	5, 1202
MroXI	GAANNNNTTC	1 cut(s)	2100
MscI	TGGCCA	2 cut(s)	5, 1202
MslI	CAYNNNNRTG	1 cut(s)	333
Msp20I	TGGCCA	2 cut(s)	5, 1202
MspA1I	CMGCKG	1 cut(s)	545
MspI	CCGG	2 cut(s)	2054, 2233
MspR9I	CCNGG	7 cut(s)	228, 1478, 2048, 2054, 2233, 2234, 2393
MunI	CAATTG	2 cut(s)	1257, 1844
MvaI	CCWGG	4 cut(s)	228, 1478, 2048, 2393
MvnI	CGCG	1 cut(s)	3050
MwoI	GCNNNNNNNGC	5 cut(s)	413, 2344, 2462, 2531, 2675
NciI	CCSGG	3 cut(s)	2054, 2233, 2234
NdeI	CATATG	1 cut(s)	345
NheI	GCTAGC	1 cut(s)	208
NlaIV	GGNNCC	2 cut(s)	2052, 3199
NmeAIII	GCCGAG	1 cut(s)	3174
NmuCI	GTSAC	2 cut(s)	13, 2207
NspI	RCATGY	5 cut(s)	1397, 1746, 2772, 2860, 3010
PaeI	GCATGC	1 cut(s)	2772
PagI	TCATGA	2 cut(s)	1552, 1605
PceI	AGGCCT	1 cut(s)	1761
PciI	ACATGT	1 cut(s)	1742
PcsI	WCGNNNNNNNCGW	1 cut(s)	2251
PdmI	GAANNNNTTC	1 cut(s)	2100
PfoI	TCCNGGA	1 cut(s)	1476
PleI	GAGTC	5 cut(s)	1016, 2204, 2626, 2689, 3134
PpsI	GAGTC	5 cut(s)	1016, 2204, 2626, 2689, 3134
PpuMI	RGGWCCY	1 cut(s)	3077
PscI	ACATGT	1 cut(s)	1742
PshBI	ATTAAT	1 cut(s)	1353
Psp5II	RGGWCCY	1 cut(s)	3077
Psp6I	CCWGG	4 cut(s)	226, 1476, 2046, 2391
PspGI	CCWGG	4 cut(s)	226, 1476, 2046, 2391
PspN4I	GGNNCC	2 cut(s)	2052, 3199
PspPI	GGNCC	3 cut(s)	2050, 3077, 3197
PspPPI	RGGWCCY	1 cut(s)	3077
PsrI	GAACNNNNNNTAC	2 cut(s)	2233, 2265
PstI	CTGCAG	3 cut(s)	544, 2362, 2836
PstNI	CAGNNNCTG	2 cut(s)	413, 3254
PsuI	RGATCY	4 cut(s)	722, 1480, 2785, 3251
PvuII	CAGCTG	1 cut(s)	545
RsaI	GTAC	4 cut(s)	81, 1662, 2295, 2638
RsaNI	GTAC	4 cut(s)	80, 1661, 2294, 2637
RseI	CAYNNNNRTG	1 cut(s)	333
Sau96I	GGNCC	3 cut(s)	2050, 3077, 3197
ScaI	AGTACT	2 cut(s)	81, 2638
SchI	GAGTC	5 cut(s)	1016, 2204, 2627, 2690, 3134
ScrFI	CCNGG	7 cut(s)	228, 1478, 2048, 2054, 2233, 2234, 2393
SduI	GDGCHC	1 cut(s)	389
SfaNI	GCATC	4 cut(s)	328, 400, 1099, 2173
SfcI	CTRYAG	3 cut(s)	540, 2358, 2832
SinI	GGWCC	1 cut(s)	3077
SmaI	CCCGGG	1 cut(s)	2234
SmiMI	CAYNNNNRTG	1 cut(s)	333
SmlI	CTYRAG	1 cut(s)	2339
SmoI	CTYRAG	1 cut(s)	2339
SpeI	ACTAGT	1 cut(s)	116
SphI	GCATGC	1 cut(s)	2772
SseBI	AGGCCT	1 cut(s)	1761
SspI	AATATT	1 cut(s)	88
SspMI	CTAG	7 cut(s)	117, 209, 252, 1272, 1685, 2180, 2634
StuI	AGGCCT	1 cut(s)	1761
StyD4I	CCNGG	7 cut(s)	226, 1476, 2046, 2052, 2231, 2232, 2391
StyI	CCWWGG	2 cut(s)	985, 1171
TaaI	ACNGT	7 cut(s)	74, 357, 619, 767, 1116, 1183, 1334
TaiI	ACGT	4 cut(s)	679, 1957, 2938, 3231
TaqI	TCGA	6 cut(s)	452, 657, 1720, 1926, 2035, 2429
TatI	WGTACW	3 cut(s)	79, 1660, 2636
TauI	GCSGC	3 cut(s)	642, 2498, 2567
TscAI	CASTG	5 cut(s)	18, 289, 770, 1119, 2280
TseFI	GTSAC	2 cut(s)	13, 2207
TseI	GCWGC	8 cut(s)	413, 539, 542, 695, 785, 971, 1372, 2462
Tsp45I	GTSAC	2 cut(s)	13, 2207
TspGWI	ACGGA	1 cut(s)	1421
TspMI	CCCGGG	1 cut(s)	2232
TspRI	CASTG	5 cut(s)	18, 289, 770, 1119, 2280
VpaK11BI	GGWCC	1 cut(s)	3077
VspI	ATTAAT	1 cut(s)	1353
XapI	RAATTY	7 cut(s)	270, 650, 1454, 1861, 2024, 2367, 2474
XceI	RCATGY	5 cut(s)	1397, 1746, 2772, 2860, 3010
XcmI	CCANNNNNNNNNTGG	1 cut(s)	60
XmaI	CCCGGG	1 cut(s)	2232
XmnI	GAANNNNTTC	1 cut(s)	2100
XspI	CTAG	7 cut(s)	117, 209, 252, 1272, 1685, 2180, 2634
ZrmI	AGTACT	2 cut(s)	81, 2638

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.