MD10G1295000.v1.1

Callose synthase

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr10
Physical Location & Seq
Reverse (-)
38268907 .. 38274860
5954 bp
Loading structure...
UTR
Exon/CDS
Intron
MD10G1295000.v1.1.491

Sequence Viewer

Length: 5331 bp
ATGGATCTCCGGCAGCGTCCGCAGCCAGGTCGCGGCGGCCGCGGACCGATACGCGCGCCGCTGCTGCCGATGCAACAGGCCTACAACATAATCCCCATACACAACCTCCTCGCAGACCACCCCTCCCTCCGCTATCCCGAGGTACGCGCCGCCGCCGCAGCCCTACGCGCCGTTGGGGACCTCCGTAAGCCGCCTTTCATCCCCTGGAGGCCGTCCTACGACCTGATGGACTGGCTGGGACTATTCTTCGGGTTCCAAATGGACAACGTTCGGAACCAGCGGGAGCATTTGGTCCTCCACCTCGCCAACTCCCAAATGCGCCTCCAGCCGCCGCCGAACATAGTTGACTCGCTCGAGCCCAGCGTCCTCAAGCGGTTCCGCCGCAAATTGCTCTACAACTACACCTCCTGGTGCTCGTACCTCGGCCGGAAGTCGAGCATCATCTTCTCCAGGCGCCGCGGCGGCGACGACCTTCGGCGCGAGCTGCTGTACGTGGCGCTGTTCCTGCTGATTTGGGGTGAGTCCGGTAACGTTCGATTCGTACCCGAATGTGTTTGTTATATTTATCATCATATGGCTATGGAACTGAACAAAGTGCTTGATGAGTATACGGACCCGGATACAGGTCGCCCATTTCTGCCCTCGGTTTCCGGGGACTGCGGGTATCTGAAGAGTGTGGTGATGCCAATTTACCAGACGATTAAAACCGAGGTGGAGAGCAGCAGAAATGGCACTGCTCCCCACTCGGCGTGGCGAAATTATGATGATATAAACGAGTATTTTTGGTCTAGGAGGTGTTTTAAGAAGCTCCAATGGCCGATTAAGTTCGATAGTAACTTTTTCGCTACTACTCCGAAGGATCGCAGGGTTGGGAAGACGGGGTTTGTGGAGCAGAGGTCGTTTTGGAATCTGTTTAGGAGCTTTGATAAGCTCTGGGTTATGTTGATTTTGTTTTTACAGGCTGCTATTATTGTTGCATGGAAGGGGACAGAGTATCCGTGGCAGGCGTTGGATCGGAGGGATGATCAGGTGCAGTTGCTGACCGTGTTTATTACTTGGGGCGGTCTTCGCCTTCTTCAGGCGGTGCTTGATGCTGGGACTCAGTATAGTTTGGTGTCCAAGGAGACAGTGTTGCTTGGGGTGAGGATGGTGCTGAAGGGTCTGGTTGCTGCGACGTGGACTATTGTGTTTTCTGTGTTTTATGCGCAGATTTGGGCTCAGAGGAATGAAGATGGGAGGTGGTCCGCTGAGGCCAATCGGAGGATTGTAGTATTTCTTGAGGCTGCACTTGTTTTCATTGTCCCAGAGTTGTTGGCATTGGTTTTATTTATAGTTCCTTGGGTGAGAAACTTCCTTGAGGAGTTGGATTTTAGTATACTATATGTGTTTACATGGTGGTTTCATACGCGGATTTTCGTGGGTCGTGGACTGAGGGAGGGGCTTGTCAGTAATATCAAGTATACATTGTTTTGGATTGCAGTTTTGGGTTCGAAATTCTCTTTCAGTTATTTCCTGCAGATCAAGCCTCTTGTTTCCCCGACGAAGGCTCTCTTGGACATAAAGCATTTCGATTACAAAATACATTTGTTTTTTGGCAGCGGGAATAGAATAGCAATCGTGTTTTTGTGGATCCCTGTTGTGTTGATGTACTGTATGGATTTGCAAATATGGTTTGCCATTTACCAATCCTTAATTGGTGCAACAATTGGGCTGTTTTCACATTTGGGCGAGATCCGAAATATAAAACAGCTAAGGCTTAGATTTCAGTTCTTTGCCAGTGCATTGCAATTTAATCTTATGCCAGAGGAGGAGTCCTTACGTCCTGAGGTGACGGCGGTGAAGAAGCTCCGTGAGGCCATCCACAGACTGAAACTGCGTTATGGACTTGGTCAAGCTTACAAGAAAACTGAATCCAGCCAAGTTGAAGCTACCAGGTTTGCCTTGATATGGAATGAAATCATGACAACTTTCAGGGAGGAAGATCTCATTAGTGATCGAGAACTTGAGCTCTTGGAACTGCCACCTAATTGCTGGAACATTAGGGTTATTCGCTGGCCATGTTGCCTCCTCTGCAATGAACTATTGCTTGCTCTGAGTCAGGCAAAAGAGATGGGAGAGGAACATGACCTGTTGCTTTGGTTGAAGATATGCAAGAATGAGTATCGGCGGTGTGCTGTCATTGAAGCTTATGACAGCATCAAGTATCTTCTGCTTCACATGGTTGTTAAACATGGCACGGAAGAAAATTCCATTGTTAAAAATTTTTTCATGGAGATAGATCAATGTATTCAGACTGCGAAGGTCACGGTTACATACAAGATGTCTATGCTTCCGCAGATTCATGCTAAGTTGATTTCCCTTATTGAGCTTCTAATGCAACAAAAGAAAGATGTAAGCAAGGTTGTGGATGTTCTGCAGGCCTTGTATGAACTTTCTGTTCGTGAGTTCCCGAGGGTGAAGAAGACCATGGACACCTTGAGGATGGAAGGCTTGGCACCTCGTAGATCAGCCGCTGATGCTGACTTTCTTTTTGAAAAGGCAGTCAACTTTCCTGATGATGAGGATGCGGTCTTCTTTAGGCATCTGCGTCGACTGCATACAATTCTCACTTCTAGAGACTCAATGCACAATGTCCCAATGAATCTTGAGGCGAGGCGACGTATCGCTTTCTTTAGCAATTCTCTTTTTATGAATATGCCCCGTGCTCCCTATGTTGAAAAAATGATGGCTTTCAGCGTGCTGACTCCATACTACGATGAGGAAGTGTTGTATGGAAAAGAAGCTCTTCGAAGTGAGAATGAAGATGGCATCTCCACCCTCTTTTATCTGCAGAAGATTTATGCAGATGAGTGGACGAACTTTATGGAACGGATGCACAGACAGGGCATGGAGAATGACGACGAAATCTTTCAAACGAAGGCAAGGGATCTCCGTGTTTGGGCATCGTTCAGAGGCCAGACATTATCTCGCACTGTTAGAGGAATGATGTACTACTATAGGGCCCTTAAGATGCTTGCATTTCTTGATACTGCATCTGAGATGGACATAAGGGATGATGGATCGCAGCAAGTTGGTTCTCATGTTTTGAGAAGCCAAAGTAGTGGTTTGGATGGTATACAGTCAGGCATGACTCATTCTTCTCGGAAACTTGGAAGAACAAGTAGCAGCGTTAGTTATTTATTCAAGGGGAATGAACATGGGATTGCTATGTTGAAGTTCACATACGTGGTTGCCTGCCAAGTATACGGGCAACACAAGGCGAAGGGAGACTACCGTGCTGAGGAGATCTTATATCTTATGAAAGACAATGAGGCCCTTCGAGTTGCCTATGTTGATGAGGTTCACTTGGGGAGGGACGAGGTTGAGTATTACTCTGTCCTTGTTAAATATGATCAGGAGACGCAAAGGGAGGTTGAGATCTATCGGATTAGGTTGCCTGGTCCACTGAAGCTTGGGGAAGGCAAACCAGAAAATCAGAACCATGCCATAATCTTCACAAGGGGTGATGCAATTCAGACCATTGACATGAACCAAGACAATTATTTTGAGGAGGCACTCAAAATGCGGAATTTGTTGGAGGAATTTAAGCACTTCTATGGTATAAGGAAGCCGACTATCTTGGGTGTCCGTGAGAATATCTTCACTGGTTCTGTGTCGTCTCTTGCTTGGTTCATGTCTGCTCAGGAGATGAGTTTTGTGACCCTGAACCAGCGTGTTCTTGCAAACCCTTTGAAGGTGCGAATGCACTACGGTCACCCAGATGTGTTTGACAGATTCTGGTTCTTGCCTCGGGGTGGTATTAGCAAGGCTTCTAAAGTGATCAATATCAGCGAGGACATATTTGCTGGCTTCAATTGTACATTGCGAGGTGGCAATGTGACTCACCATGAATATATACAGGTGGGCAAGGGGAGGGATGTCGGGTTGAATCAGATCTCGATGTTTGAGGCTAAGGTTGCTAGTGGCAACGGTGAGCAGGTTTTAAGCAGAGATGTGTACCGGCTGGGTCATAGATTGGACTTCTTTCGAATGCTTTCATTCTTCTACTCAACTGTTGGGTTCTACTTTAACACGATGATGGTGATACTGACTGTTTATTCATTCTTGTGGGGCCGCCTTTTTCTTTCTCTCAGTGGCATCGAAAAAAAGACAAGCACCAACAAATCGCTTGGTGTGATCTTGAACCAGCAGTTTATTATCCAGCTAGGTCTCTTCACTGCCCTCCCAATGATTGTCGAAAACTCTCTTGAACAGGGTTTCCTTCGAGCAGTTTGGGATTTCTTAACAATGCAGTTGCAGCTTGCATCAGCTTTCTACACATTCTCAATGGGCACTCGTACTCACTTCTTTGGCCGTACTATTCTTCATGGGGGTGCAAAATACCGAGCAACTGGACGTGGTTTTGTGGTCGAACACAAGAGCTTTGCTGAGAACTATCGACTCTACTCTCGAAGCCATTTTGTGAAGGCAATTGAGCTCGGGATCATTTTAATAGTGTATGCTGCTCATAGCTCTGTTGCGGATACTTTTGTTTACATTGCCATGTCAATCTCAAGCTGGTGTCTCGTATTGTCGTGGATAATGGCACCATTTGTGTTCAATCCTTCAGGATTTGACTGGCTGAAAACTGTATATGACTTTGATGATTTTATAAACTGGTTATGGTATTCTGGGGGTGTGTTTACGAAAGCTGAACAGAGCTGGGAAACATGGTGGTACGAGGAACAAGATCATCTGAGAACAACTGGTCTTTGGGGAAAGCTGTTGGAAATTATTCTGGATCTTCGTTTCTTCTTCTTCCAGTATGGTGTTGTGTATCAACTGAAGATTACTAATGAAAATACAAGCATAGCTGTTTACTTGTTATCTTGGATATACATGGTAGTGGCTGTTGGAATCTATATAGTCCTAGCATATGCTCAGGACAAATATGCAGCAAAGGACCATATTTACTACCGGCTAGTTCAGCTTACTGTCATAATTGCCTTAGTACTCGTAGCCGTGTTGCTGATTGAGTTCACTAAGATCAGTTTTCTTGATTTCATCTCAAGTCTCTTGGCATTCATCCCTACTGGCTACGGTATAATCTTAATAGCTCAAGTACTCAGACCTTTTCTGCAGTCTACGGTGGTGTGGGATACTATTGTTTCGTTGGCCCGACTGTATGATTTGATTTTCGGAGTAATTGTTATGGCTCCTGTGGCACTGCTGTCATGGTTACCTGGATTTCAGTCAATGCAGACTAGGATCTTGTTCAATGAAGCGTTCAGCCGGGGTCTTCAGATATCTCGTATTCTTTCCGGCAAAAAGTCACGATTCTTCCATTGGTGA
Functional Annotation

Protein Analysis

1777

Amino Acids

206.25

Weight (kDa)

9.04

Isoelectric Point (pI)

41.49

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
FKS1_dom1 PF14288 161 - 273 6e-43 1,3-beta-glucan synthase subunit FKS1, domain-1
CALS1 PF25968 688 - 870 2.4e-26 Callose synthase 1 domain
Glucan_synthase PF02364 878 - 1673 2.1e-259 1,3-beta-glucan synthase component
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0012885)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 4652
Acc16I TGCGCA 1 cut(s) 1206
Acc36I ACCTGC 1 cut(s) 3967
AccB1I GGYRCC 3 cut(s) 453, 2494, 4585
AccI GTMKAC 7 cut(s) 608, 1375, 1460, 2590, 3115, 3243, 5123
AccII CGCG 9 cut(s) 33, 42, 54, 56, 147, 168, 459, 480, 1408
AclI AACGTT 2 cut(s) 267, 531
AcoI YGGCCR 5 cut(s) 37, 424, 815, 2054, 4351
AcsI RAATTY 5 cut(s) 1493, 2245, 2260, 3568, 3581
AcuI CTGAAG 7 cut(s) 689, 1061, 1175, 3467, 4590, 4844, 5264
AcyI GRCGYC 1 cut(s) 454
AflII CTTAAG 1 cut(s) 3005
AjiI CACGTC 2 cut(s) 1176, 4397
AjnI CCWGG 7 cut(s) 25, 203, 407, 449, 1931, 3436, 5221
AjuI GAANNNNNNNTTGG 2 cut(s) 1535, 1567
AleI CACNNNNGTG 1 cut(s) 3224
AloI GAACNNNNNNTCC 2 cut(s) 4242, 4274
Alw21I GWGCWC 4 cut(s) 416, 2010, 2707, 4479
Alw26I GTCTC 8 cut(s) 1118, 2610, 3261, 3392, 3663, 4214, 4568, 5057
AlwNI CAGNNNCTG 3 cut(s) 1039, 2513, 3777
Ama87I CYCGRG 5 cut(s) 137, 353, 2449, 3789, 4478
ApaI GGGCCC 1 cut(s) 3004
ApoI RAATTY 5 cut(s) 1493, 2245, 2260, 3568, 3581
ArsI GACNNNNNNTTYG 4 cut(s) 2513, 2545, 3527, 3559
Asp700I GAANNNNTTC 5 cut(s) 2784, 2907, 3638, 4033, 4773
AspLEI GCGC 9 cut(s) 56, 58, 149, 170, 321, 456, 480, 499, 1207
AsuC2I CCSGG 3 cut(s) 617, 652, 5273
AsuII TTCGAA 3 cut(s) 1490, 2788, 4027
AvaI CYCGRG 5 cut(s) 137, 353, 2449, 3789, 4478
AvaII GGWCC 7 cut(s) 44, 178, 292, 613, 1242, 3440, 4942
AxyI CCTNAGG 1 cut(s) 1824
BaeGI GKGCMC 2 cut(s) 3004, 4334
BaeI ACNNNNGTAYC 4 cut(s) 4515, 4548, 5130, 5163
BalI TGGCCA 1 cut(s) 2056
BamHI GGATCC 1 cut(s) 1629
BanI GGYRCC 3 cut(s) 453, 2494, 4585
BanII GRGCYC 5 cut(s) 360, 1219, 2010, 3004, 4479
BarI GAAGNNNNNNTAC 4 cut(s) 3206, 3238, 3254, 3286
BbsI GAAGAC 5 cut(s) 881, 1058, 2468, 2563, 5270
Bbv12I GWGCWC 4 cut(s) 416, 2010, 2707, 4479
BbvCI CCTCAGC 2 cut(s) 1248, 3279
BceAI ACGGC 5 cut(s) 155, 196, 1848, 4338, 4985
BcgI CGANNNNNNTGC 4 cut(s) 11, 45, 2570, 2604
BciT130I CCWGG 7 cut(s) 27, 205, 409, 451, 1933, 3438, 5223
BciVI GTATCC 4 cut(s) 613, 1005, 4516, 5131
BclI TGATCA 3 cut(s) 1024, 3391, 3819
BcnI CCSGG 3 cut(s) 617, 652, 5273
BcoDI GTCTC 8 cut(s) 1118, 2610, 3261, 3392, 3663, 4214, 4568, 5057
BfaI CTAG 7 cut(s) 789, 2613, 3960, 4205, 4910, 4961, 5244
BfmI CTRYAG 5 cut(s) 1514, 2414, 2828, 2995, 5117
BfoI RGCGCY 2 cut(s) 457, 500
BfrI CTTAAG 1 cut(s) 3005
BfuAI ACCTGC 1 cut(s) 3967
BfuI GTATCC 4 cut(s) 613, 1005, 4516, 5131
BglI GCCNNNNNGGC 1 cut(s) 462
BglII AGATCT 4 cut(s) 1981, 3285, 3417, 3933
BmcAI AGTACT 2 cut(s) 4992, 5103
Bme18I GGWCC 7 cut(s) 44, 178, 292, 613, 1242, 3440, 4942
BmeT110I CYCGRG 5 cut(s) 137, 353, 2449, 3789, 4478
BmgBI CACGTC 2 cut(s) 1176, 4397
BpiI GAAGAC 5 cut(s) 881, 1058, 2468, 2563, 5270
BplI GAGNNNNNCTC 2 cut(s) 3356, 3388
BpmI CTGGAG 3 cut(s) 226, 308, 433
Bpu10I CCTNAGC 6 cut(s) 1248, 1751, 3279, 3681, 3951, 4920
Bpu14I TTCGAA 3 cut(s) 1490, 2788, 4027
BpuEI CTTGAG 9 cut(s) 353, 1298, 1376, 2024, 2497, 2666, 4537, 5032, 5082
BpuMI CCSGG 3 cut(s) 617, 652, 5273
BsaAI YACGTR 2 cut(s) 493, 3226
BsaBI GATNNNNATC 1 cut(s) 3824
BsaHI GRCGYC 1 cut(s) 454
BsaI GGTCTC 1 cut(s) 4214
BsaWI WCCGGW 1 cut(s) 524
Bse118I RCCGGY 2 cut(s) 3999, 4956
Bse1I ACTGG 9 cut(s) 236, 1776, 3649, 4396, 4622, 4661, 4750, 4801, 5077
Bse21I CCTNAGG 1 cut(s) 1824
Bse3DI GCAATG 5 cut(s) 1781, 2080, 3860, 3880, 4536
Bse8I GATNNNNATC 1 cut(s) 3824
BseBI CCWGG 7 cut(s) 27, 205, 409, 451, 1933, 3438, 5223
BseJI GATNNNNATC 1 cut(s) 3824
BseMI GCAATG 5 cut(s) 1781, 2080, 3860, 3880, 4536
BseNI ACTGG 9 cut(s) 236, 1776, 3649, 4396, 4622, 4661, 4750, 4801, 5077
BsePI GCGCGC 1 cut(s) 54
BseRI GAGGAG 7 cut(s) 98, 1373, 1820, 1823, 2057, 3296, 3563
BseSI GKGCMC 2 cut(s) 3004, 4334
BseX3I CGGCCG 2 cut(s) 37, 424
BseYI CCCAGC 5 cut(s) 235, 359, 1094, 4003, 4701
BsgI GTGCAG 2 cut(s) 1052, 1269
Bsh1236I CGCG 9 cut(s) 33, 42, 54, 56, 147, 168, 459, 480, 1408
Bsh1285I CGRYCG 2 cut(s) 40, 427
BshNI GGYRCC 3 cut(s) 453, 2494, 4585
BsiEI CGRYCG 2 cut(s) 40, 427
BsiHKAI GWGCWC 4 cut(s) 416, 2010, 2707, 4479
BsiHKCI CYCGRG 5 cut(s) 137, 353, 2449, 3789, 4478
BsiSI CCGG 9 cut(s) 10, 427, 525, 617, 651, 4000, 4957, 5272, 5301
BslFI GGGAC 8 cut(s) 191, 252, 668, 1000, 1111, 1286, 2618, 3368
BsmAI GTCTC 8 cut(s) 1118, 2610, 3261, 3392, 3663, 4214, 4568, 5057
BsmBI CGTCTC 2 cut(s) 3392, 3663
BsmFI GGGAC 8 cut(s) 191, 252, 668, 1000, 1111, 1286, 2618, 3368
BsmI GAATGC 3 cut(s) 3747, 4035, 5060
Bso31I GGTCTC 1 cut(s) 4214
BsoBI CYCGRG 5 cut(s) 137, 353, 2449, 3789, 4478
Bsp119I TTCGAA 3 cut(s) 1490, 2788, 4027
Bsp120I GGGCCC 1 cut(s) 3000
Bsp1286I GDGCHC 8 cut(s) 360, 416, 1219, 2010, 2707, 3004, 4334, 4479
Bsp1407I TGTACA 1 cut(s) 3857
Bsp19I CCATGG 1 cut(s) 2466
BspFNI CGCG 9 cut(s) 33, 42, 54, 56, 147, 168, 459, 480, 1408
BspHI TCATGA 1 cut(s) 1959
BspMAI CTGCAG 4 cut(s) 1518, 2418, 2832, 5121
BspMI ACCTGC 1 cut(s) 3967
BspQI GCTCTTC 1 cut(s) 2790
BspT104I TTCGAA 3 cut(s) 1490, 2788, 4027
BspT107I GGYRCC 3 cut(s) 453, 2494, 4585
BspTI CTTAAG 1 cut(s) 3005
BspTNI GGTCTC 1 cut(s) 4214
BsrDI GCAATG 5 cut(s) 1781, 2080, 3860, 3880, 4536
BsrFI RCCGGY 2 cut(s) 3999, 4956
BsrGI TGTACA 1 cut(s) 3857
BsrI ACTGG 9 cut(s) 236, 1776, 3649, 4396, 4622, 4661, 4750, 4801, 5077
BssAI RCCGGY 2 cut(s) 3999, 4956
BssHII GCGCGC 1 cut(s) 54
BssNAI GTATAC 5 cut(s) 609, 1376, 1461, 3116, 3244
BssNI GRCGYC 1 cut(s) 454
BssT1I CCWWGG 3 cut(s) 1119, 1337, 2466
Bst1107I GTATAC 5 cut(s) 609, 1376, 1461, 3116, 3244
Bst2UI CCWGG 7 cut(s) 27, 205, 409, 451, 1933, 3438, 5223
Bst6I CTCTTC 3 cut(s) 665, 2790, 4217
BstACI GRCGYC 1 cut(s) 454
BstAFI CTTAAG 1 cut(s) 3005
BstAUI TGTACA 1 cut(s) 3857
BstBAI YACGTR 2 cut(s) 493, 3226
BstBI TTCGAA 3 cut(s) 1490, 2788, 4027
BstDSI CCRYGG 4 cut(s) 40, 457, 998, 2466
BstEII GGTNACC 2 cut(s) 3752, 5217
BstENI CCTNNNNNAGG 1 cut(s) 1076
BstFNI CGCG 9 cut(s) 33, 42, 54, 56, 147, 168, 459, 480, 1408
BstH2I RGCGCY 2 cut(s) 457, 500
BstHHI GCGC 9 cut(s) 56, 58, 149, 170, 321, 456, 480, 499, 1207
BstMAI GTCTC 8 cut(s) 1118, 2610, 3261, 3392, 3663, 4214, 4568, 5057
BstMCI CGRYCG 2 cut(s) 40, 427
BstNI CCWGG 7 cut(s) 27, 205, 409, 451, 1933, 3438, 5223
BstPI GGTNACC 2 cut(s) 3752, 5217
BstSFI CTRYAG 5 cut(s) 1514, 2414, 2828, 2995, 5117
BstSLI GKGCMC 2 cut(s) 3004, 4334
BstUI CGCG 9 cut(s) 33, 42, 54, 56, 147, 168, 459, 480, 1408
BstV2I GAAGAC 5 cut(s) 881, 1058, 2468, 2563, 5270
BstXI CCANNNNNNTGG 1 cut(s) 3101
BstZ17I GTATAC 5 cut(s) 609, 1376, 1461, 3116, 3244
BstZI CGGCCG 2 cut(s) 37, 424
Bsu36I CCTNAGG 1 cut(s) 1824
BsuI GTATCC 4 cut(s) 613, 1005, 4516, 5131
BtgI CCRYGG 4 cut(s) 40, 457, 998, 2466
BtrI CACGTC 2 cut(s) 1176, 4397
BtsI GCAGTG 3 cut(s) 732, 4215, 5204
BtsIMutI CAGTG 9 cut(s) 732, 1134, 1783, 2970, 3443, 3642, 4138, 4215, 5204
BveI ACCTGC 1 cut(s) 3967
CaiI CAGNNNCTG 3 cut(s) 1039, 2513, 3777
CciI TCATGA 1 cut(s) 1959
CciNI GCGGCCGC 1 cut(s) 37
CfoI GCGC 9 cut(s) 56, 58, 149, 170, 321, 456, 480, 499, 1207
Cfr10I RCCGGY 2 cut(s) 3999, 4956
Cfr42I CCGCGG 2 cut(s) 43, 460
CpoI CGGWCCG 1 cut(s) 44
CseI GACGC 4 cut(s) 5, 352, 2576, 3409
CsiI ACCWGGT 1 cut(s) 1931
CspI CGGWCCG 1 cut(s) 44
DinI GGCGCC 1 cut(s) 455
EaeI YGGCCR 5 cut(s) 37, 424, 815, 2054, 4351
EagI CGGCCG 2 cut(s) 37, 424
Eam1104I CTCTTC 3 cut(s) 665, 2790, 4217
EarI CTCTTC 3 cut(s) 665, 2790, 4217
EciI GGCGGA 1 cut(s) 368
Ecl136II GAGCTC 2 cut(s) 2008, 4477
EclXI CGGCCG 2 cut(s) 37, 424
Eco130I CCWWGG 3 cut(s) 1119, 1337, 2466
Eco147I AGGCCT 2 cut(s) 80, 2420
Eco24I GRGCYC 5 cut(s) 360, 1219, 2010, 3004, 4479
Eco31I GGTCTC 1 cut(s) 4214
Eco32I GATATC 1 cut(s) 5286
Eco47I GGWCC 7 cut(s) 44, 178, 292, 613, 1242, 3440, 4942
Eco52I CGGCCG 2 cut(s) 37, 424
Eco53kI GAGCTC 2 cut(s) 2008, 4477
Eco57I CTGAAG 7 cut(s) 689, 1061, 1175, 3467, 4590, 4844, 5264
Eco81I CCTNAGG 1 cut(s) 1824
Eco88I CYCGRG 5 cut(s) 137, 353, 2449, 3789, 4478
Eco91I GGTNACC 2 cut(s) 3752, 5217
EcoICRI GAGCTC 2 cut(s) 2008, 4477
EcoNI CCTNNNNNAGG 1 cut(s) 1076
EcoO109I RGGNCCY 4 cut(s) 178, 3000, 3001, 3313
EcoO65I GGTNACC 2 cut(s) 3752, 5217
EcoRII CCWGG 7 cut(s) 25, 203, 407, 449, 1931, 3436, 5221
EcoRV GATATC 1 cut(s) 5286
EcoT14I CCWWGG 3 cut(s) 1119, 1337, 2466
EcoT38I GRGCYC 5 cut(s) 360, 1219, 2010, 3004, 4479
EgeI GGCGCC 1 cut(s) 455
EheI GGCGCC 1 cut(s) 455
ErhI CCWWGG 3 cut(s) 1119, 1337, 2466
Esp3I CGTCTC 2 cut(s) 3392, 3663
FalI AAGNNNNNCTT 4 cut(s) 1535, 1567, 2769, 2801
FaqI GGGAC 8 cut(s) 191, 252, 668, 1000, 1111, 1286, 2618, 3368
FauI CCCGC 3 cut(s) 273, 653, 1592
FauNDI CATATG 2 cut(s) 573, 4915
FbaI TGATCA 3 cut(s) 1024, 3391, 3819
FblI GTMKAC 7 cut(s) 608, 1375, 1460, 2590, 3115, 3243, 5123
FriOI GRGCYC 5 cut(s) 360, 1219, 2010, 3004, 4479
FspBI CTAG 7 cut(s) 789, 2613, 3960, 4205, 4910, 4961, 5244
FspI TGCGCA 1 cut(s) 1206
GlaI GCGC 9 cut(s) 55, 57, 148, 169, 320, 455, 479, 498, 1206
GsaI CCCAGC 5 cut(s) 239, 363, 1098, 4007, 4705
GsuI CTGGAG 3 cut(s) 226, 308, 433
HaeII RGCGCY 2 cut(s) 457, 500
HapII CCGG 9 cut(s) 10, 427, 525, 617, 651, 4000, 4957, 5272, 5301
HgaI GACGC 4 cut(s) 5, 352, 2576, 3409
HhaI GCGC 9 cut(s) 56, 58, 149, 170, 321, 456, 480, 499, 1207
Hin1I GRCGYC 1 cut(s) 454
Hin6I GCGC 9 cut(s) 54, 56, 147, 168, 319, 454, 478, 497, 1205
HinP1I GCGC 9 cut(s) 54, 56, 147, 168, 319, 454, 478, 497, 1205
HincII GTYRAC 3 cut(s) 346, 2545, 2591
HindII GTYRAC 3 cut(s) 346, 2545, 2591
HindIII AAGCTT 3 cut(s) 1893, 2184, 3449
HpaII CCGG 9 cut(s) 10, 427, 525, 617, 651, 4000, 4957, 5272, 5301
Hpy99I CGWCG 6 cut(s) 470, 1177, 1543, 2592, 2661, 2903
HpyCH4IV ACGT 8 cut(s) 267, 492, 531, 1175, 1819, 2659, 3225, 4396
HpySE526I ACGT 8 cut(s) 267, 492, 531, 1175, 1819, 2659, 3225, 4396
Hsp92I GRCGYC 1 cut(s) 454
HspAI GCGC 9 cut(s) 54, 56, 147, 168, 319, 454, 478, 497, 1205
KasI GGCGCC 1 cut(s) 453
Ksp22I TGATCA 3 cut(s) 1024, 3391, 3819
KspI CCGCGG 2 cut(s) 43, 460
LguI GCTCTTC 1 cut(s) 2790
LmnI GCTCC 8 cut(s) 283, 742, 813, 889, 918, 1851, 2710, 5200
MabI ACCWGGT 1 cut(s) 1931
MaeI CTAG 7 cut(s) 789, 2613, 3960, 4205, 4910, 4961, 5244
MaeII ACGT 8 cut(s) 267, 492, 531, 1175, 1819, 2659, 3225, 4396
MfeI CAATTG 3 cut(s) 1704, 3853, 4470
MhlI GDGCHC 8 cut(s) 360, 416, 1219, 2010, 2707, 3004, 4334, 4479
MlsI TGGCCA 1 cut(s) 2056
MluNI TGGCCA 1 cut(s) 2056
Mly113I GGCGCC 1 cut(s) 454
MmeI TCCRAC 5 cut(s) 990, 1344, 3555, 4746, 4873
Mox20I TGGCCA 1 cut(s) 2056
MroXI GAANNNNTTC 5 cut(s) 2784, 2907, 3638, 4033, 4773
MscI TGGCCA 1 cut(s) 2056
MslI CAYNNNNRTG 9 cut(s) 3224, 3524, 3594, 3759, 4076, 4105, 4371, 4541, 4883
Msp20I TGGCCA 1 cut(s) 2056
MspA1I CMGCKG 7 cut(s) 42, 61, 280, 459, 1247, 1599, 2513
MspCI CTTAAG 1 cut(s) 3005
MspI CCGG 9 cut(s) 10, 427, 525, 617, 651, 4000, 4957, 5272, 5301
MunI CAATTG 3 cut(s) 1704, 3853, 4470
Mva1269I GAATGC 3 cut(s) 3747, 4035, 5060
MvaI CCWGG 7 cut(s) 27, 205, 409, 451, 1933, 3438, 5223
MvnI CGCG 9 cut(s) 33, 42, 54, 56, 147, 168, 459, 480, 1408
NarI GGCGCC 1 cut(s) 454
NciI CCSGG 3 cut(s) 617, 652, 5273
NcoI CCATGG 1 cut(s) 2466
NdeI CATATG 2 cut(s) 573, 4915
NmeAIII GCCGAG 2 cut(s) 402, 725
NmuCI GTSAC 6 cut(s) 1828, 2302, 3697, 3752, 3877, 5310
NotI GCGGCCGC 1 cut(s) 37
NsbI TGCGCA 1 cut(s) 1206
NspV TTCGAA 3 cut(s) 1490, 2788, 4027
OliI CACNNNNGTG 1 cut(s) 3224
PaeR7I CTCGAG 1 cut(s) 353
PagI TCATGA 1 cut(s) 1959
PauI GCGCGC 1 cut(s) 54
PceI AGGCCT 2 cut(s) 80, 2420
PciSI GCTCTTC 1 cut(s) 2790
PcsI WCGNNNNNNNCGW 2 cut(s) 360, 537
PctI GAATGC 3 cut(s) 3747, 4035, 5060
PdmI GAANNNNTTC 5 cut(s) 2784, 2907, 3638, 4033, 4773
PfeI GAWTC 9 cut(s) 537, 907, 1910, 2338, 2641, 3774, 3928, 4896, 5316
PflFI GACNNNGTC 1 cut(s) 1887
PluTI GGCGCC 1 cut(s) 457
Ppu21I YACGTR 2 cut(s) 493, 3226
PpuMI RGGWCCY 1 cut(s) 178
PsiI TTATAA 1 cut(s) 4652
Psp124BI GAGCTC 2 cut(s) 2010, 4479
Psp1406I AACGTT 2 cut(s) 267, 531
Psp5II RGGWCCY 1 cut(s) 178
Psp6I CCWGG 7 cut(s) 25, 203, 407, 449, 1931, 3436, 5221
PspEI GGTNACC 2 cut(s) 3752, 5217
PspFI CCCAGC 5 cut(s) 235, 359, 1094, 4003, 4701
PspGI CCWGG 7 cut(s) 25, 203, 407, 449, 1931, 3436, 5221
PspOMI GGGCCC 1 cut(s) 3000
PspPPI RGGWCCY 1 cut(s) 178
PspXI VCTCGAGB 1 cut(s) 353
PstI CTGCAG 4 cut(s) 1518, 2418, 2832, 5121
PstNI CAGNNNCTG 3 cut(s) 1039, 2513, 3777
PsyI GACNNNGTC 1 cut(s) 1887
PteI GCGCGC 1 cut(s) 54
RseI CAYNNNNRTG 9 cut(s) 3224, 3524, 3594, 3759, 4076, 4105, 4371, 4541, 4883
Rsr2I CGGWCCG 1 cut(s) 44
RsrII CGGWCCG 1 cut(s) 44
SacI GAGCTC 2 cut(s) 2010, 4479
SacII CCGCGG 2 cut(s) 43, 460
SalI GTCGAC 1 cut(s) 2589
SapI GCTCTTC 1 cut(s) 2790
ScaI AGTACT 2 cut(s) 4992, 5103
SduI GDGCHC 8 cut(s) 360, 416, 1219, 2010, 2707, 3004, 4334, 4479
SexAI ACCWGGT 1 cut(s) 1931
SfcI CTRYAG 5 cut(s) 1514, 2414, 2828, 2995, 5117
SfoI GGCGCC 1 cut(s) 455
Sfr274I CTCGAG 1 cut(s) 353
Sfr303I CCGCGG 2 cut(s) 43, 460
SfuI TTCGAA 3 cut(s) 1490, 2788, 4027
SgrBI CCGCGG 2 cut(s) 43, 460
SinI GGWCC 7 cut(s) 44, 178, 292, 613, 1242, 3440, 4942
SlaI CTCGAG 1 cut(s) 353
SmiMI CAYNNNNRTG 9 cut(s) 3224, 3524, 3594, 3759, 4076, 4105, 4371, 4541, 4883
SseBI AGGCCT 2 cut(s) 80, 2420
SspDI GGCGCC 1 cut(s) 453
SspMI CTAG 7 cut(s) 789, 2613, 3960, 4205, 4910, 4961, 5244
SstI GAGCTC 2 cut(s) 2010, 4479
StuI AGGCCT 2 cut(s) 80, 2420
StyI CCWWGG 3 cut(s) 1119, 1337, 2466
TaiI ACGT 8 cut(s) 270, 495, 534, 1178, 1822, 2662, 3228, 4399
TaqII GACCGA 1 cut(s) 61
TatI WGTACW 5 cut(s) 1647, 2988, 3857, 4990, 5101
TfiI GAWTC 9 cut(s) 537, 907, 1910, 2338, 2641, 3774, 3928, 4896, 5316
TscAI CASTG 9 cut(s) 739, 1134, 1783, 2977, 3450, 3649, 4138, 4222, 5211
TseFI GTSAC 6 cut(s) 1828, 2302, 3697, 3752, 3877, 5310
Tsp45I GTSAC 6 cut(s) 1828, 2302, 3697, 3752, 3877, 5310
TspGWI ACGGA 8 cut(s) 173, 626, 987, 1838, 2252, 2884, 2921, 3617
TspRI CASTG 9 cut(s) 739, 1134, 1783, 2977, 3450, 3649, 4138, 4222, 5211
Tth111I GACNNNGTC 1 cut(s) 1887
Vha464I CTTAAG 1 cut(s) 3005
VpaK11BI GGWCC 7 cut(s) 44, 178, 292, 613, 1242, 3440, 4942
XagI CCTNNNNNAGG 1 cut(s) 1076
XapI RAATTY 5 cut(s) 1493, 2245, 2260, 3568, 3581
XbaI TCTAGA 1 cut(s) 2612
XcmI CCANNNNNNNNNTGG 2 cut(s) 1691, 2028
XhoI CTCGAG 1 cut(s) 353
XmiI GTMKAC 7 cut(s) 608, 1375, 1460, 2590, 3115, 3243, 5123
XmnI GAANNNNTTC 5 cut(s) 2784, 2907, 3638, 4033, 4773
XspI CTAG 7 cut(s) 789, 2613, 3960, 4205, 4910, 4961, 5244
ZrmI AGTACT 2 cut(s) 4992, 5103
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.