Rw5G005690

Callose synthase

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr5
Physical Location & Seq
Reverse (-)
6004258 .. 6013658
9401 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw5G005690.1

Sequence Viewer

Length: 5298 bp
ATGAATCTCCGGCAACGGACGCCGGCCACGCGCGCCAACGCGCGGCCGGAGATGCAAGAGGCCTTCAACATAATCCCCATCCACAACCTGCTCGCCGACCACCCCTCCCTCCGCTACCCTGAGATACGCGCCGCCGCGGCCACCCTACGCTCCGTCGGGGACCTCCGGAAGCCGCCGTTCGTGCAGTGGAAAAGCGACTACGACCTGATGAACTGGCTCGGAATCTTCTTCGGGTTCCAAATCGACAACGTTCGGAACCAGCGGGAGCACCTGGTCCTCCACCTCGCCAACTCCCAAATGCAGCTCCAGCCTCCGCCCAACCTCGCCGACGTCCTCGAGGCCGGCGTCCTCCGCCGCTTCCGCCGCAAATTGCTCGGAAACTACACCTCCTGGTGCGCCTACCTCGGCCGCAGATCAAACGTCATCGTTTCCCGTCGCCGCCCCGACCATCTCCGCCGCGAGCTGCTCTACGTGGCGCTGTACCTGCTCGTCTGGGGTGAGTCCGGTAACCTAAGATTTACTCCCGAGTGTATTTGTTACATTTACCATCATATGGCTATGGAGCTCAATCAGGTCCTTGACGAGGACATTGACCCCGAGACGGGTCGGCCCTTTGTCCCCTCTGTCTCCGGTGAAAATGCTTTTTTGAAGAGTGTGATTATGCCGATTTACGCTACTATTAAGGATGAGGTTGAGAGCAGTAGAAATGGCACCAGGCCGCACTCGGCCTGGCGCAACTATGATGATATCAATGAGTACTTTTGGTCCAGGAGGTGTTTCAGGAGTCTCAAATGGCCTCTCAATTACTCTAGTAATTTTCTCAGTACAACTCCCAAGGGGAGCAGGGTGGGGAAGACTGGGTTTGTGGAGCAGAGGTCGTTTTGGAATCTGTTTAGGAGCTTCGACAAGCTGTGGGTGTTGTTGTTTTTGTTTTTGCAAGCTAGTCTTATTGTGGCTTGGGAGGGGAAGGAGTATCCCTGGACGGCATTGGAGAGTAGGGACGTGCAGGTGCGGTTGTTGACTGTGTTTATTACTTGGGGAGGCCTTAGGGTGCTTCAGGCAGTGCTTGATGCTGGGACTCAGTATAGTTTGGTGACGAGGGAGACTATGTTGCTTGGGGTGAGAATGGTGCTAAAGGCGGCGGTTGCAATAACGTGGACTATTCTATTTGCGGTGTTTTATGCGGGCATTTGGGCTCAGAAGAATTCCGATGGTAGGTGGTCTGCTGAAGCAAATAGCAAGATTGTTGATTTTTGTTGGGCTGTACTGGTTTTTGTTATTCCAGAATTGCTGGCATTGGTTCTGTTTATAGTTCCTTGGGTGAGGAACTTCATTGAAGAGTTAAATTGTAATGCAATTTATGTGTTTACATGGTGGTTTCACACCCGGATTTTTGTTGGTCGCGCACTGAGGGAAGGGCTTGTCAGTAATGTCAAATACACAGTGTTCTGGATTATCGTGTTGGCTTCAAAGTTTGGTTTCAGTTATTTCCTTCAGATCAAGCCGCTTGTTAACACGACAAAGAGTCTCATGAAGATTAAGGTTCACACATACAAGATGCATGTTTTTTTTGAGGGGACTAATGTAATAGCAGTTGTGTTGTTGTGGATTCCGGTTCTGTTGATTTACCTGATGGATCTGCAGATATGGTATGCCATTCACTCATCCTTTATTGGTGCAACAATTGGGCTGTTTTCACATTTGGGGGAGATAAGGAATATCAAACAGCTGAGGCTTAGGTTTCAGTTTTTTGCTAGTGCATTGCAATTTAATCTCATGCCAGAGGAGCAGTCATTACGTCCTGAGCTGACAATGGTGAAGAAACTCCGCGATGCCATACACAGGCTGAAGTTGCGGTATGGACTTGGTCAAGCCTACAAGAAGACTGAATCAAGCCAAATAGAAGCTACCAGGTTTGCCTTGATATGGAATGAAATCATGACAACTTTCAGGGAGGAAGATCTTATCAGTGATCGAGAACTTGAGCTCATGGAACTGCCACCTAATTGTTGGCACATTAGAGTTATTCGCTGGCCGTGTTTCCTCCTTGCAAATGAACTATTGCTTGCTCTACGTCAGGCAACGGAGCCGGCAGACGAACCTGATCAGTTGCTTTGGTTGAGGATATGCAAGAGTGAGTATCGGCGCTGTGCTATCATTGAAGCTTATGATAGCATAAGGTATCTGCTTCTTACGGTTGTTAGACATGGCACAGAAGAAAATTCCATCATTGACCATTTTTTCAGGGAGATAGATCAATGTATTGAAAATCAGAAGTTCACGGTTACGTACACGATGTCTCTGCTTCCGCAAATTCATGCCAAGTTAATTTCTCTTATTGACCTTCTGCTGCAATTAAAGAAAGATACAAGTAAGACAGTGGATATATTGCAGGCCCTGTATGAACTCTCTGTTCGTGAATTCCCAAAGGAGAAGAGGAACATGCAGGAATTGAGGGTGGAAGGCCTGGCAACTGGTAGTAGATCCACTGAAGAAGGCTTGCTTTTTGAAAATGCGATTCAGTTTCCTGATGATGAGGATGCAACCTTCTTTAGGCATCTGCGACGTCTGCATACAATTCTCACTTCTAGAGACTCGATGCACAATGTCCCAGTGAATATTGATGCAAGAAAGCGCATTGCTTTCTTTAGCAATTCACTTTTCATGAATATGCCCCGTGCTCCCTATGTTGAGAAAATGATGGCTTTCAGTGTCCTGACTCCATATTATGATGAGGAAGTGTTGTATGGCAAAGAATCTCTTCGATCTGAGAACGAAGATGGGATTTCCACCTTGTTTTATCTGCAGAAGATTTATGAAGGTGAGTGGACGAACTTTCTGGAACGGATGTACAGAGAGGGCATGAAGAATGACGAGGAACTCTTTACTACGAAGGCAAGGGATCTCCGCGTTTGGGCATCATACAGGGGCCAGACATTATCGCGTACTGTGAGAGGAATGATGTACTACTATAGGGCACTGAAGATGCTTGCCTTTCTTGATTCTGCATCTGAGATGGATATAAGGGATGGATCACAGCAAGTTGCCTCTCATGGTTTGATGATCCACAACAACATTATGGATGGTGTACAGTCAGGTTTGCAACCAGCTTCACAAAAACTCGGAAGAACAGCCAGTGTGAGTTACTTATTCAAGGGCCATGAACATGGCATTGCTCTGTTGAAATTTACGTATGTGGTTGCCTGCCAACTATATGGGCAGCATAAGGCTAAGGGAGATCACCGTGCTGAGGAGATATTATTTCTGATGAAAAACAATGAGGCCCTTCGAGTGGCCTATGTTGATAAGGTTGAGTTGGGGAGAGATGAGGTTGAGTATTACTCTGTGCTTGTTAAATATGATCAGCAGATCCAAAGGGAGGTAGAGATCTATCGGATCAGGTTGCCTGGTCCCCTGAAGCTCGGTGAAGGTAAACCAGAGAATCAAAACCATGCCATAATCTTTACCAGGGGTGATGCAATTCAGACAATTGACATGAACCAAGACAATTCTTTTGAGGAGGCACTCAAAATGCGGAATTTGCTGGAGGAATTCAAGAACTTTTATGGCCTCAGAAAGCCAACTATCTTGGGTGTCCGTGAGGATATCTTCACAGGTTCTGTATCATCCCTTGCTTGGTTCATGTCTGCTCAGGAGATGAGTTTTGTGACCCTGAACCAGCGTGTTCTGGCAAACCCTTTGAAGGTGCGAATGCACTATGGTCACCCAGATGTGTTTGACAGGTTCTGGTTCTTGCAGCGGGGTGGAATCAGCAAGGCTTCTAAAGTTATCAATATCAGTGAGGACATATTTGCTGGCTTCAATTGCACACTGCGAGGTGGCAATGTGACTCACCATGAATATATACAGGTGGGCAAGGGAAGGGATGTTGGGTTGAATCAGATCTCCATGTTTGAGGCCAAGGTTGCTAGTGGCAACGGTGAGCAGGCTTTGAGCAGAGATGTGTATCGATTGGGTCATAGATTGGACTTCTTTCGGATGCTTTCATTTTTCTATTCGACTGTTGGGTTCTACTTTAACACGATGATAGTGGTACTGACTGTTTATTCATTCTTGTGGGGCCGCCTTTTTCTTGCTCTCAGTGGTGTCGAGGACGATCTTGACACAAGCAACAATAAAGCAGTTGGTGTGATGTTAAATCAGCAGTTCATTATCCAGCTAGGGCTGTTCACCGCCCTTCCAATGATTGTTGAGAACTCTCTCGAACAGGGTTTCCTTACAGCAGTTTGGGAGTTCTTAACAATGCAGTTGCAGCTTGCTTCAGTCTTTTACACATTCTCCATGGGAACCCGTACCCATTACTTTGGTCGTACTATTCTTCATGGGGGTGCAAAGTACCGAGCAACTGGACGTGGCTTTGTGGTCCAGCACAAGAGCTTTGCTGAGAACTATCGACTCTACTCTCGCAGCCATTTTGTGAAGGCAATTGAGCTTGGGATTATTTTAGTAGTGTATGCTGCTCATAGCAGCGTGGCTCGAGATACCTTTGTTTACATTGGCATGAGTATCTCAAGCTGGTTTCTGGTAGTGTCATGGATGCTGGCTCCCTTTATTTTTAACCCTTCTGGATTTGATTGGCTGAAAACTGTCTATGACTTTGATGATTTTATAAGTTGGTTATGGTATTCTGGAGGGGTGTTTACAAAAGCTGAACTGAGCTGGGAAACATGGTGGTATGAGGAACAGGACCATTTGAGAACAACTGGGCTTTGGGGAAAGCTATTGGAAATTATTTTGGATCTTCGTTTCTTCTTCTTCCAGTATGGTGTTGTGTATCAACTAGGTATTGTCCATGGAAACAAAAGTATAGGTGTTTACTTGCTGTCTTGGATATACATGGTTGTAGCTGTTGGGATTTATATGACCATATCCTGGGCTCAGAACAAATATGCAGCGAAGGAACATATATACTACCGGCTGGTTCAGCTTTGTGTCATAATGGTTATGGTACTCTTTATTGTTTTACTGCTGGAGTTCACTAGATTCAAGTTCGTTGACATTCTCTCAAGTCTCTTGGCATTCATCCCTACTGGCTGGGGTATAATTTTAATAGCTCAAGTGCTTAGACCTTTTCTGCAGACCACAGTGGTGTGGGATACTGTGGTTTCCTTGGCTCGAATTTATGATATGCTTTTTGGAGTAACTGTTATGGCTCCTGTGGCGCTGCTGTCATGGTTACCTGGATTTCAGTCAATGCAGACCAGGATCTTGTTCAATGAAGCATTCAGCAGAGGTCTCCAGATATCTCGTATCCTTACTGGCAAAAAGTCTAACTGA
Functional Annotation

Protein Analysis

1765

Amino Acids

204.84

Weight (kDa)

8.9

Isoelectric Point (pI)

41.76

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
FKS1_dom1 PF14288 154 - 266 1.2e-43 1,3-beta-glucan synthase subunit FKS1, domain-1
CALS1 PF25968 679 - 862 2.9e-27 Callose synthase 1 domain
Glucan_synthase PF02364 870 - 1666 2.3e-253 1,3-beta-glucan synthase component
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0012885)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 4631
AarI CACCTGC 1 cut(s) 997
AatII GACGTC 2 cut(s) 333, 2569
AbsI CCTCGAGG 1 cut(s) 335
Acc36I ACCTGC 3 cut(s) 96, 492, 997
AccB1I GGYRCC 1 cut(s) 710
AccB7I CCANNNNNTGG 2 cut(s) 553, 4893
AccIII TCCGGA 1 cut(s) 165
AclI AACGTT 1 cut(s) 249
AclWI GGATC 9 cut(s) 1644, 2478, 2910, 3040, 3058, 3364, 3404, 4767, 5234
AcoI YGGCCR 5 cut(s) 24, 44, 138, 406, 2033
AcsI RAATTY 8 cut(s) 1204, 2221, 2313, 2420, 3185, 3538, 3551, 5139
AcuI CTGAAG 8 cut(s) 1040, 1248, 1478, 1868, 2511, 3002, 3437, 4266
AcyI GRCGYC 4 cut(s) 20, 330, 345, 2566
AhdI GACNNNNNGTC 1 cut(s) 1524
AjiI CACGTC 2 cut(s) 1003, 4373
AleI CACNNNNGTG 1 cut(s) 5108
AloI GAACNNNNNNTCC 2 cut(s) 4218, 4250
Alw21I GWGCWC 4 cut(s) 270, 567, 1989, 2683
Alw26I GTCTC 9 cut(s) 593, 631, 791, 1097, 1532, 2304, 2586, 5036, 5261
AlwI GGATC 9 cut(s) 1644, 2478, 2910, 3040, 3058, 3364, 3404, 4767, 5234
AlwNI CAGNNNCTG 3 cut(s) 2398, 3620, 3747
Ama87I CYCGRG 4 cut(s) 335, 524, 596, 4497
Aor13HI TCCGGA 1 cut(s) 165
ApoI RAATTY 8 cut(s) 1204, 2221, 2313, 2420, 3185, 3538, 3551, 5139
ArsI GACNNNNNNTTYG 2 cut(s) 3497, 3529
Asp700I GAANNNNTTC 1 cut(s) 2760
AsuC2I CCSGG 1 cut(s) 1387
AvaI CYCGRG 4 cut(s) 335, 524, 596, 4497
AvaII GGWCC 7 cut(s) 160, 274, 574, 765, 3410, 4384, 4708
AxyI CCTNAGG 1 cut(s) 1046
BaeGI GKGCMC 1 cut(s) 2980
BaeI ACNNNNGTAYC 4 cut(s) 4494, 4527, 5109, 5142
BanI GGYRCC 1 cut(s) 710
BanII GRGCYC 4 cut(s) 567, 1198, 1989, 4900
BbsI GAAGAC 2 cut(s) 860, 1889
Bbv12I GWGCWC 4 cut(s) 270, 567, 1989, 2683
BbvCI CCTCAGC 2 cut(s) 1730, 3249
BceAI ACGGC 3 cut(s) 160, 999, 2020
BcgI CGANNNNNNTGC 4 cut(s) 355, 389, 2284, 2318
BciVI GTATCC 3 cut(s) 984, 5110, 5282
BclI TGATCA 2 cut(s) 2104, 3361
BcnI CCSGG 1 cut(s) 1387
BcoDI GTCTC 9 cut(s) 593, 631, 791, 1097, 1532, 2304, 2586, 5036, 5261
BfaI CTAG 8 cut(s) 810, 942, 1755, 2589, 3930, 4181, 4802, 5001
BfmI CTRYAG 4 cut(s) 1640, 2804, 2971, 5096
BfoI RGCGCY 3 cut(s) 479, 2149, 5186
BfuAI ACCTGC 3 cut(s) 96, 492, 997
BfuI GTATCC 3 cut(s) 984, 5110, 5282
BglI GCCNNNNNGGC 1 cut(s) 137
BglII AGATCT 3 cut(s) 1960, 3387, 3903
BmcAI AGTACT 1 cut(s) 758
Bme18I GGWCC 7 cut(s) 160, 274, 574, 765, 3410, 4384, 4708
BmeRI GACNNNNNGTC 1 cut(s) 1524
BmeT110I CYCGRG 4 cut(s) 335, 524, 596, 4497
BmgBI CACGTC 2 cut(s) 1003, 4373
BmrI ACTGGG 3 cut(s) 867, 2606, 4734
BmuI ACTGGG 3 cut(s) 867, 2606, 4734
BpiI GAAGAC 2 cut(s) 860, 1889
BplI GAGNNNNNCTC 2 cut(s) 3326, 3358
BpmI CTGGAG 5 cut(s) 290, 3566, 4671, 5012, 5243
Bpu10I CCTNAGC 6 cut(s) 1730, 1736, 1803, 3231, 3249, 3651
BpuEI CTTGAG 4 cut(s) 2003, 4516, 5011, 5061
BpuMI CCSGG 1 cut(s) 1387
Bsa29I ATCGAT 1 cut(s) 3970
BsaAI YACGTR 3 cut(s) 472, 2289, 3192
BsaBI GATNNNNATC 1 cut(s) 3966
BsaHI GRCGYC 4 cut(s) 20, 330, 345, 2566
BsaI GGTCTC 1 cut(s) 5261
BsaWI WCCGGW 4 cut(s) 165, 503, 629, 1612
Bse118I RCCGGY 4 cut(s) 22, 341, 2089, 4935
Bse21I CCTNAGG 1 cut(s) 1046
Bse3DI GCAATG 4 cut(s) 1760, 2637, 3171, 3850
Bse8I GATNNNNATC 1 cut(s) 3966
BseAI TCCGGA 1 cut(s) 165
BseCI ATCGAT 1 cut(s) 3970
BseJI GATNNNNATC 1 cut(s) 3966
BseMI GCAATG 4 cut(s) 1760, 2637, 3171, 3850
BsePI GCGCGC 1 cut(s) 31
BseRI GAGGAG 3 cut(s) 1799, 3266, 3533
BseSI GKGCMC 1 cut(s) 2980
BseX3I CGGCCG 2 cut(s) 44, 406
BseYI CCCAGC 3 cut(s) 1073, 4680, 5055
BsgI GTGCAG 2 cut(s) 203, 1025
Bsh1285I CGRYCG 2 cut(s) 47, 409
BshNI GGYRCC 1 cut(s) 710
BshVI ATCGAT 1 cut(s) 3970
BsiEI CGRYCG 2 cut(s) 47, 409
BsiHKAI GWGCWC 4 cut(s) 270, 567, 1989, 2683
BsiHKCI CYCGRG 4 cut(s) 335, 524, 596, 4497
BslFI GGGAC 7 cut(s) 173, 602, 1013, 1090, 1591, 2594, 3396
BsmAI GTCTC 9 cut(s) 593, 631, 791, 1097, 1532, 2304, 2586, 5036, 5261
BsmBI CGTCTC 1 cut(s) 593
BsmFI GGGAC 7 cut(s) 173, 602, 1013, 1090, 1591, 2594, 3396
BsmI GAATGC 3 cut(s) 3717, 5039, 5243
Bso31I GGTCTC 1 cut(s) 5261
BsoBI CYCGRG 4 cut(s) 335, 524, 596, 4497
Bsp1286I GDGCHC 7 cut(s) 270, 567, 1198, 1989, 2683, 2980, 4900
Bsp13I TCCGGA 1 cut(s) 165
Bsp1407I TGTACA 2 cut(s) 2850, 3088
Bsp19I CCATGG 2 cut(s) 4302, 4813
BspDI ATCGAT 1 cut(s) 3970
BspEI TCCGGA 1 cut(s) 165
BspHI TCATGA 3 cut(s) 1530, 1938, 2664
BspMAI CTGCAG 3 cut(s) 1644, 2808, 5100
BspMI ACCTGC 3 cut(s) 96, 492, 997
BspPI GGATC 9 cut(s) 1644, 2478, 2910, 3040, 3058, 3364, 3404, 4767, 5234
BspT107I GGYRCC 1 cut(s) 710
BspTNI GGTCTC 1 cut(s) 5261
BsrDI GCAATG 4 cut(s) 1760, 2637, 3171, 3850
BsrFI RCCGGY 4 cut(s) 22, 341, 2089, 4935
BsrGI TGTACA 2 cut(s) 2850, 3088
BssAI RCCGGY 4 cut(s) 22, 341, 2089, 4935
BssHII GCGCGC 1 cut(s) 31
BssNI GRCGYC 4 cut(s) 20, 330, 345, 2566
BssT1I CCWWGG 6 cut(s) 834, 1316, 3921, 4302, 4813, 5130
Bst6I CTCTTC 4 cut(s) 644, 1332, 2429, 2766
BstACI GRCGYC 4 cut(s) 20, 330, 345, 2566
BstAUI TGTACA 2 cut(s) 2850, 3088
BstBAI YACGTR 3 cut(s) 472, 2289, 3192
BstDSI CCRYGG 3 cut(s) 135, 4302, 4813
BstEII GGTNACC 3 cut(s) 506, 3722, 5196
BstENI CCTNNNNNAGG 2 cut(s) 581, 2551
BstH2I RGCGCY 3 cut(s) 479, 2149, 5186
BstMAI GTCTC 9 cut(s) 593, 631, 791, 1097, 1532, 2304, 2586, 5036, 5261
BstMCI CGRYCG 2 cut(s) 47, 409
BstNSI RCATGY 2 cut(s) 1565, 2446
BstPI GGTNACC 3 cut(s) 506, 3722, 5196
BstSFI CTRYAG 4 cut(s) 1640, 2804, 2971, 5096
BstSLI GKGCMC 1 cut(s) 2980
BstSNI TACGTA 2 cut(s) 2289, 3192
BstV2I GAAGAC 2 cut(s) 860, 1889
BstX2I RGATCY 9 cut(s) 1636, 1960, 2483, 2902, 3369, 3387, 3903, 4759, 5226
BstXI CCANNNNNNTGG 3 cut(s) 3167, 3215, 4325
BstYI RGATCY 9 cut(s) 1636, 1960, 2483, 2902, 3369, 3387, 3903, 4759, 5226
BstZI CGGCCG 2 cut(s) 44, 406
Bsu15I ATCGAT 1 cut(s) 3970
Bsu36I CCTNAGG 1 cut(s) 1046
BsuI GTATCC 3 cut(s) 984, 5110, 5282
BsuTUI ATCGAT 1 cut(s) 3970
BtgI CCRYGG 3 cut(s) 135, 4302, 4813
BtgZI GCGATG 1 cut(s) 1845
BtrI CACGTC 2 cut(s) 1003, 4373
BtsI GCAGTG 3 cut(s) 191, 1068, 3830
BveI ACCTGC 3 cut(s) 96, 492, 997
CaiI CAGNNNCTG 3 cut(s) 2398, 3620, 3747
CciI TCATGA 3 cut(s) 1530, 1938, 2664
Cfr10I RCCGGY 4 cut(s) 22, 341, 2089, 4935
Cfr42I CCGCGG 1 cut(s) 138
ClaI ATCGAT 1 cut(s) 3970
CseI GACGC 2 cut(s) 28, 334
CsiI ACCWGGT 2 cut(s) 270, 1910
DriI GACNNNNNGTC 1 cut(s) 1524
EaeI YGGCCR 5 cut(s) 24, 44, 138, 406, 2033
EagI CGGCCG 2 cut(s) 44, 406
Eam1104I CTCTTC 4 cut(s) 644, 1332, 2429, 2766
Eam1105I GACNNNNNGTC 1 cut(s) 1524
EarI CTCTTC 4 cut(s) 644, 1332, 2429, 2766
EciI GGCGGA 4 cut(s) 303, 341, 350, 443
Ecl136II GAGCTC 2 cut(s) 565, 1987
EclXI CGGCCG 2 cut(s) 44, 406
Eco105I TACGTA 2 cut(s) 2289, 3192
Eco130I CCWWGG 6 cut(s) 834, 1316, 3921, 4302, 4813, 5130
Eco147I AGGCCT 3 cut(s) 62, 1044, 2466
Eco24I GRGCYC 4 cut(s) 567, 1198, 1989, 4900
Eco31I GGTCTC 1 cut(s) 5261
Eco32I GATATC 3 cut(s) 748, 3607, 5265
Eco47I GGWCC 7 cut(s) 160, 274, 574, 765, 3410, 4384, 4708
Eco52I CGGCCG 2 cut(s) 44, 406
Eco53kI GAGCTC 2 cut(s) 565, 1987
Eco57I CTGAAG 8 cut(s) 1040, 1248, 1478, 1868, 2511, 3002, 3437, 4266
Eco81I CCTNAGG 1 cut(s) 1046
Eco88I CYCGRG 4 cut(s) 335, 524, 596, 4497
Eco91I GGTNACC 3 cut(s) 506, 3722, 5196
EcoICRI GAGCTC 2 cut(s) 565, 1987
EcoNI CCTNNNNNAGG 2 cut(s) 581, 2551
EcoO109I RGGNCCY 4 cut(s) 160, 574, 2395, 3283
EcoO65I GGTNACC 3 cut(s) 506, 3722, 5196
EcoRI GAATTC 3 cut(s) 1204, 2420, 3551
EcoRV GATATC 3 cut(s) 748, 3607, 5265
EcoT14I CCWWGG 6 cut(s) 834, 1316, 3921, 4302, 4813, 5130
EcoT22I ATGCAT 1 cut(s) 1563
EcoT38I GRGCYC 4 cut(s) 567, 1198, 1989, 4900
ErhI CCWWGG 6 cut(s) 834, 1316, 3921, 4302, 4813, 5130
Esp3I CGTCTC 1 cut(s) 593
FalI AAGNNNNNCTT 6 cut(s) 930, 962, 2487, 2519, 2745, 2777
FaqI GGGAC 7 cut(s) 173, 602, 1013, 1090, 1591, 2594, 3396
FauI CCCGC 3 cut(s) 255, 1177, 3753
FauNDI CATATG 1 cut(s) 552
FbaI TGATCA 2 cut(s) 2104, 3361
FriOI GRGCYC 4 cut(s) 567, 1198, 1989, 4900
FspBI CTAG 8 cut(s) 810, 942, 1755, 2589, 3930, 4181, 4802, 5001
GsaI CCCAGC 3 cut(s) 1077, 4684, 5059
GsuI CTGGAG 5 cut(s) 290, 3566, 4671, 5012, 5243
HaeII RGCGCY 3 cut(s) 479, 2149, 5186
HgaI GACGC 2 cut(s) 28, 334
Hin1I GRCGYC 4 cut(s) 20, 330, 345, 2566
HincII GTYRAC 3 cut(s) 1020, 1513, 5017
HindII GTYRAC 3 cut(s) 1020, 1513, 5017
HindIII AAGCTT 1 cut(s) 2163
HpaI GTTAAC 1 cut(s) 1513
Hpy99I CGWCG 4 cut(s) 158, 332, 438, 2568
Hsp92I GRCGYC 4 cut(s) 20, 330, 345, 2566
Kpn2I TCCGGA 1 cut(s) 165
KroI GCCGGC 3 cut(s) 22, 341, 2089
KroNI GCCGGC 3 cut(s) 24, 343, 2091
Ksp22I TGATCA 2 cut(s) 2104, 3361
KspAI GTTAAC 1 cut(s) 1513
KspI CCGCGG 1 cut(s) 138
MabI ACCWGGT 2 cut(s) 270, 1910
MaeI CTAG 8 cut(s) 810, 942, 1755, 2589, 3930, 4181, 4802, 5001
MfeI CAATTG 4 cut(s) 1683, 3489, 3823, 4446
MflI RGATCY 9 cut(s) 1636, 1960, 2483, 2902, 3369, 3387, 3903, 4759, 5226
MhlI GDGCHC 7 cut(s) 270, 567, 1198, 1989, 2683, 2980, 4900
MlyI GAGTC 8 cut(s) 509, 793, 1072, 1534, 2588, 2713, 3844, 4410
Mph1103I ATGCAT 1 cut(s) 1563
MroI TCCGGA 1 cut(s) 165
MroNI GCCGGC 3 cut(s) 22, 341, 2089
MroXI GAANNNNTTC 1 cut(s) 2760
MslI CAYNNNNRTG 7 cut(s) 2669, 3165, 3729, 4075, 4347, 4520, 5108
MspA1I CMGCKG 4 cut(s) 137, 262, 1729, 3760
MunI CAATTG 4 cut(s) 1683, 3489, 3823, 4446
Mva1269I GAATGC 3 cut(s) 3717, 5039, 5243
NaeI GCCGGC 3 cut(s) 24, 343, 2091
NciI CCSGG 1 cut(s) 1387
NcoI CCATGG 2 cut(s) 4302, 4813
NdeI CATATG 1 cut(s) 552
NgoMIV GCCGGC 3 cut(s) 22, 341, 2089
NmeAIII GCCGAG 2 cut(s) 384, 704
NmuCI GTSAC 4 cut(s) 1093, 3667, 3722, 3847
NsiI ATGCAT 1 cut(s) 1563
NspI RCATGY 2 cut(s) 1565, 2446
OliI CACNNNNGTG 1 cut(s) 5108
PaeR7I CTCGAG 2 cut(s) 335, 4497
PagI TCATGA 3 cut(s) 1530, 1938, 2664
PaqCI CACCTGC 1 cut(s) 997
PauI GCGCGC 1 cut(s) 31
PceI AGGCCT 3 cut(s) 62, 1044, 2466
PcsI WCGNNNNNNNCGW 1 cut(s) 342
PctI GAATGC 3 cut(s) 3717, 5039, 5243
PdiI GCCGGC 3 cut(s) 24, 343, 2091
PdmI GAANNNNTTC 1 cut(s) 2760
PflFI GACNNNGTC 1 cut(s) 1866
PflMI CCANNNNNTGG 2 cut(s) 553, 4893
PfoI TCCNGGA 1 cut(s) 767
PleI GAGTC 8 cut(s) 508, 792, 1072, 1533, 2588, 2713, 3844, 4410
PpsI GAGTC 8 cut(s) 508, 792, 1072, 1533, 2588, 2713, 3844, 4410
Ppu21I YACGTR 3 cut(s) 472, 2289, 3192
PpuMI RGGWCCY 2 cut(s) 160, 574
PsiI TTATAA 1 cut(s) 4631
Psp124BI GAGCTC 2 cut(s) 567, 1989
Psp1406I AACGTT 1 cut(s) 249
Psp5II RGGWCCY 2 cut(s) 160, 574
PspEI GGTNACC 3 cut(s) 506, 3722, 5196
PspFI CCCAGC 3 cut(s) 1073, 4680, 5055
PspPPI RGGWCCY 2 cut(s) 160, 574
PspXI VCTCGAGB 1 cut(s) 335
PstI CTGCAG 3 cut(s) 1644, 2808, 5100
PstNI CAGNNNCTG 3 cut(s) 2398, 3620, 3747
PsuI RGATCY 9 cut(s) 1636, 1960, 2483, 2902, 3369, 3387, 3903, 4759, 5226
PsyI GACNNNGTC 1 cut(s) 1866
PteI GCGCGC 1 cut(s) 31
PvuII CAGCTG 1 cut(s) 1729
RseI CAYNNNNRTG 7 cut(s) 2669, 3165, 3729, 4075, 4347, 4520, 5108
SacI GAGCTC 2 cut(s) 567, 1989
SacII CCGCGG 1 cut(s) 138
ScaI AGTACT 1 cut(s) 758
SchI GAGTC 8 cut(s) 509, 793, 1072, 1534, 2588, 2713, 3844, 4410
SduI GDGCHC 7 cut(s) 270, 567, 1198, 1989, 2683, 2980, 4900
SexAI ACCWGGT 2 cut(s) 270, 1910
SfcI CTRYAG 4 cut(s) 1640, 2804, 2971, 5096
Sfr274I CTCGAG 2 cut(s) 335, 4497
Sfr303I CCGCGG 1 cut(s) 138
SgrBI CCGCGG 1 cut(s) 138
SinI GGWCC 7 cut(s) 160, 274, 574, 765, 3410, 4384, 4708
SlaI CTCGAG 2 cut(s) 335, 4497
SmiMI CAYNNNNRTG 7 cut(s) 2669, 3165, 3729, 4075, 4347, 4520, 5108
SmlI CTYRAG 6 cut(s) 335, 1982, 4497, 4531, 5026, 5076
SmoI CTYRAG 6 cut(s) 335, 1982, 4497, 4531, 5026, 5076
SnaBI TACGTA 2 cut(s) 2289, 3192
SseBI AGGCCT 3 cut(s) 62, 1044, 2466
SspI AATATT 1 cut(s) 2620
SspMI CTAG 8 cut(s) 810, 942, 1755, 2589, 3930, 4181, 4802, 5001
SstI GAGCTC 2 cut(s) 567, 1989
StuI AGGCCT 3 cut(s) 62, 1044, 2466
StyI CCWWGG 6 cut(s) 834, 1316, 3921, 4302, 4813, 5130
TatI WGTACW 6 cut(s) 756, 824, 1264, 2850, 2964, 3088
TseFI GTSAC 4 cut(s) 1093, 3667, 3722, 3847
Tsp45I GTSAC 4 cut(s) 1093, 3667, 3722, 3847
TspGWI ACGGA 5 cut(s) 31, 142, 2099, 2860, 3587
Tth111I GACNNNGTC 1 cut(s) 1866
Van91I CCANNNNNTGG 2 cut(s) 553, 4893
VpaK11BI GGWCC 7 cut(s) 160, 274, 574, 765, 3410, 4384, 4708
XagI CCTNNNNNAGG 2 cut(s) 581, 2551
XapI RAATTY 8 cut(s) 1204, 2221, 2313, 2420, 3185, 3538, 3551, 5139
XbaI TCTAGA 1 cut(s) 2588
XceI RCATGY 2 cut(s) 1565, 2446
XcmI CCANNNNNNNNNTGG 1 cut(s) 2007
XhoI CTCGAG 2 cut(s) 335, 4497
XmnI GAANNNNTTC 1 cut(s) 2760
XspI CTAG 8 cut(s) 810, 942, 1755, 2589, 3930, 4181, 4802, 5001
ZraI GACGTC 2 cut(s) 331, 2567
ZrmI AGTACT 1 cut(s) 758
Zsp2I ATGCAT 1 cut(s) 1563
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.