Rroxscaffold_1G00068110

Callose synthase

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000001
Physical Location & Seq
Reverse (-)
89416991 .. 89423393
6403 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_1G00068110.1

Sequence Viewer

Length: 4194 bp
ATGTTGCTTGGGGTGAGAATGGTGCTAAAGGCGGCGGTTGCAATAACGTGGACTATTCTATTTGCGGTGTTTTATGCGGGCATTTGGGCTCAGAAGAATTCCGATGGGAGGTGGTCTGCTGAAGCAAATAGCAAGATTGTTGATTTTTGTTGGGCTGTACTGGTTTTTGTTATCCCAGAATTGCTGGCATTGGTTCTGTTTATAGTTCCTTGGGTGAGGAACTTCATTGAAAAGTTAAATTGTAATGCAATTTATGTGTTTACGTGGTGGTTTCACACCCGGATTTTTGTTGGTCGCGCACTGAGGGAAGGGCTTGTCAGTAATGTCAAATACACAGTGTTCTGGATTATTGTGTTGGCTTCAAAGTTTGCTTTCAGTTATTTCCTTCAGATCAAGCCGCTTGTTAACACGACAAAGACTCTCATGAAGATTAAGGTTCACACATACAAGATGCATGTTTTTTTTTCGGGAACTAATGTAATAGCAGTTGTGTTGTTGTGGATTCCGGTTCTGTTGATTTACCTGATGGATCTGCAGATATGGTATGCCATTCACTCATCCTTTATTGGTGCAACAATTGGGCTGTTTTCACATTTGGGGGAGATAAGGAATATCAAACAGCTGAGGCTTAGGTTTCAGTTTTTTGCTAGTGCATTGCAATTTAATCTCATGCCAGAGGAGCAGTCATTACGTCCTGAGCTGACAATGGTGAAGAAACTCCGCGATGCCATACACAGGCTGAGGTTGCGGTATGGACTTGGTCAAGCCTACAAGAAGACTGAATCAAGCCAAATAGAAGCTACCAGGTTTGCCTTGATATGGAATGAAATCATGACAACTTTCAGGGAGGAAGATCTTATTAGTGATCGAGAACTTGAGCTCATGGAACTGCCACCTAATTGTTGGAAGATTAGAGTTATTCGCTGGCCGTGTTTCCTCCTTGCAAATGAACTATTGCTTGCTCTACGTCAGGCAACAGAGCTGGCAGATGAACCTGATCAGTTGCTTTGGTTGAGGATATGCAAGAGTGAGTATCGGCGGTGTGCTATCATTGAAGCTTATGATAGCATAAGGTATCTGCTTCTTATGGTTGTTAGAGATGGCACAGAAGAAAATTCCATCATTGACCATTTTTTCAAGGAGATAGATCAATGTATTGAAAATCAGAAGTTCACGGTTACGTACAAGATGTCTCTGCTTCCGCAAATTCATGCCAAGTTAATTTCTCTTATTGACCTTCTGCTGCAATTAAAGAAAGATACAAGTAAGACAGTGGATATATTGCAGGCCCTGTATGAACTCTCTGTTCGTGAATTCCCACAGGTGAAGAGGTCCGTGGCAACATTGAGGGTGGAAGGCCTGGCAACTCGTAGTAGATCCACTGAAGAAGGCTTGCTTTTTGAAAATGCGATTCAGTTTCCTGATGATGAGGATGCAACCTTCTTTAGGCATCTGCGACGTCTGCATACAATTCTCACTTCTAGAGACTCGATGCACAATGTCCCAGTGAATATTGCTGCAAGAAAGCGCATTGCTTTCTTTAGCAATTCACTTTTCATGAACATGCCTCGTGCTCCCAATGTTGAGAAAATGATGGCTTTCAGTGTCCTGACTCCATATTATGATGAGGAAGTGTTGTATGGCAAAGAATCTCTTCGATCTGAGAACGAAGATGGTATTTCCACCTTGTTTTATCTGCAGAAGATTTATGAAGGTGAGTGGACAAACTTTCTGGAACGGATGTACAGAGAGGGCATGAAGAATGACGAGGAACTCTTTACTACGAAGGCAAGGGATCTCCGTGTTTGGGCATCATACAGAGGCCAGACATTATCGCGTACTGTGAGAGGGATGATGTACTACTATAGGGCACTGAAGATGCTTGCCTTTCTTGATTCTGCATCTGAGATGGATATAGGATATGGATCACAGCAAGTTGCCTCTCATGGTTTGATGACCCAAAATAACATTATGGATGGTGTACAGTCAGGTTTGCAACCAGCTTCACGAAAACTCGGAAGAACAGCCAGTGTGGCTTACTTATTCAAGGGCCATGAACGTGGCATTGCTATGTTGAAATTTACGTATGTGGTTGCCTGCCAACTATATGGGCAGCATAAGGCTAAGGGAGATCCCCGTGCTGAGGAGATATTATTTCTGATGAAAAACAATGAGGCCCTTCGAGTGGCCTATGTTGATAAGGTTGATTTGGGGAGAGATGAGGTTGAGTATTACTCTGTGCTTGTTAAATATGATCAGCAGATCCAAAGCGAGGTAGAGATCTATCGGATCAGGTTGCCTGGTCCCCTGAAACTCGGTGAAGGTAAACCAGAGAATCAAAACCATGCCATAATCTTTACCAGGGGTGATGCAATTCAGACAATTGACATGAACCAAGACAATTCTTTTGAGGAGGCACTCAAAATGCGGAATTTGCTGGAGGAGTTCAAGAACTTTTATGGCCTCAGAAAGCCAACTATCTTGGGTGTCCGTGAGGATATCTTCACAGGTTCTGTATCATCCCTTGCTTGGTTCATGTCTGCTCAGGAGATGAGTTTTGTGACCCTGAACCAGCGTGTTCTGGCAAACCCTTTGAAGGTGCGAATGCACTATGGTCACCCAGATGTGTTTGACAGGTTCTGGTTCTTGCAGCGGGGTGGAATTAGCAAGGCTTCTAAAGTTATCAATATCAGTGAGGACATATTTGCTGGCTTCAATTGCACACTGCGAGGTGGCAATGTGACTCACCATGAATATATACAGGTGGGCAAGGGAAGGGATGTTGGGTTGAATCAGATCTCCATGTTTGAGGCCAAGGTTGCTAGTGGCAACGGTGAGCAGGCTTTGAGCAGAGATGTGTATCGATTGGGTCATAGATTGGACTTCTTTCGGATGCTTTCATTTTTCTACTCGACTGTTGGGTTCTACTTTAACACAATGATAGTGGTACTGACTGTTTATTCATTCTTGTGGGGCCGCCTTTTTCTTGCTCTCAGTGGTGTCGAGGACGATCTTGACACAAGCAACAATAAAGCAGTTGGTGTGATGTTAAATCAACAGTTCATTATCCAGCTAGGGCTGTTCACCGCCCTTCCAATGATTGTTGAGAACTCTCTCGAACAGGGTTTCCTTACAGCAGTTTGGGAGTTCTTAACAATGCAGTTGCAGCTTGCTTCAGTCTTTTACACATTTTCCATGGGAACCCGTACCCATTACTTTGGTCGTACTATTCTTCATGGGGGTGCAAAGTACCGAGCAACTGGACGTGGCTTTGTGGTCCAGCACAAGAGCTTTGCTGAGAACTATCGACTCTACTCTCGCAGCCATTTTGTGAAGGCAATTGAGCTTGGGATTATTTTAGTAGTGTATGCTGCTCATAGCAATGTGGCTCGAGATACCTTTGTTTACATTGGCATGAGTATCTCAAGCTGGTTTCTGGTAGTGTCATGGATGCTGGCTCCCTTTATTTTTAACCCTTCTGGATTTGATTGGCTGAAAACTGTCTATGACTTTGATGATTTTATAAGTTGGTTATGGTATTCTTCTGGAGGGGTGTTTACAAAAGCTGAACTGAGCTGGGAAACATGGTGGTATGAGGAACAGGACCATTTGAGAACAACTGGGCTTTGGGGAAAGCTATTGGAAATTATTTTGGATCTTCGTTTCTTCTTCTTCCAGTATGGTGTTGTGTATCAACTAGGTATTGTCCATGGAAACAAAAGTATAGGTGTTTACTTGCTGTCTTGGATATACATGGTTGTAGCTGTTGGGATTTATATGACCATATCCTGGGCTCAGAACAAATATGCAGCGAAGGAACATATATACTACCGGCTAGTTCAGCTTTGTGTCATAATGGTTATGGTACTCTTTATTGTTTTACTGCTGGAGTTCACTAGATTCAAGTTCCTTGACATTCTCTCAAGTCTCTTGGCATTCATCCCTACTGGCTGGGGTATAATTTTAATAGCTCAAGTGCTTAGACCTTTTCTGCAGACCACAGTGGTGTGGGATACTGTGGTTTCCTTGGCTCGAATTTATGATATGCTTTTTGGAGTAACTGTTATGGCTCCTGTGGCCCTGCTGTCATGGTTACCTGGATTTCAGTCAATGCAGACCAGGATCTTGTTCAATGAAGCATTCAGCAGAGGTCTCCAGATATCTCGTATCCTTACTGGCAAAAAGTCTAACTGA
Functional Annotation

Protein Analysis

1397

Amino Acids

161.65

Weight (kDa)

8.96

Isoelectric Point (pI)

39.25

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
CALS1 PF25968 310 - 493 6.4e-28 Callose synthase 1 domain
Glucan_synthase PF02364 501 - 1297 2.5e-252 1,3-beta-glucan synthase component
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0012885)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 3524
AatII GACGTC 1 cut(s) 1462
AccB7I CCANNNNNTGG 1 cut(s) 3789
AccII CGCG 3 cut(s) 297, 723, 1837
AclWI GGATC 9 cut(s) 537, 1371, 1803, 1933, 2126, 2257, 2297, 3663, 4130
AcoI YGGCCR 1 cut(s) 926
AcsI RAATTY 7 cut(s) 97, 1114, 1206, 1313, 2078, 2431, 4035
AcuI CTGAAG 5 cut(s) 141, 371, 1404, 1895, 3159
AcyI GRCGYC 1 cut(s) 1459
AjiI CACGTC 1 cut(s) 3266
AjnI CCWGG 7 cut(s) 803, 1359, 2299, 2360, 3788, 4096, 4118
AleI CACNNNNGTG 1 cut(s) 4004
AloI GAACNNNNNNTCC 2 cut(s) 3111, 3143
Alw21I GWGCWC 2 cut(s) 882, 1576
Alw26I GTCTC 4 cut(s) 1197, 1479, 3932, 4157
AlwI GGATC 9 cut(s) 537, 1371, 1803, 1933, 2126, 2257, 2297, 3663, 4130
AlwNI CAGNNNCTG 3 cut(s) 1291, 2513, 2640
Ama87I CYCGRG 1 cut(s) 3390
ApeKI GCWGC 8 cut(s) 1243, 1517, 2113, 2650, 3166, 3321, 3371, 3809
ApoI RAATTY 7 cut(s) 97, 1114, 1206, 1313, 2078, 2431, 4035
ArsI GACNNNNNNTTYG 2 cut(s) 2390, 2422
Asp700I GAANNNNTTC 1 cut(s) 1653
AspLEI GCGC 2 cut(s) 299, 1530
AspS9I GGNCC 9 cut(s) 1288, 1332, 2050, 2176, 2303, 2974, 3277, 3604, 4078
AsuC2I CCSGG 1 cut(s) 280
AvaI CYCGRG 1 cut(s) 3390
AvaII GGWCC 4 cut(s) 1332, 2303, 3277, 3604
BaeGI GKGCMC 1 cut(s) 1873
BaeI ACNNNNGTAYC 4 cut(s) 3387, 3420, 4005, 4038
BanII GRGCYC 3 cut(s) 91, 882, 3796
BauI CACGAG 1 cut(s) 1569
BbsI GAAGAC 1 cut(s) 782
Bbv12I GWGCWC 2 cut(s) 882, 1576
BbvCI CCTCAGC 3 cut(s) 623, 740, 2142
BbvI GCAGC 8 cut(s) 1230, 1504, 2125, 2662, 3178, 3333, 3358, 3821
BccI CCATC 8 cut(s) 98, 520, 1094, 1127, 1588, 1667, 1903, 1970
BceAI ACGGC 1 cut(s) 913
BciT130I CCWGG 7 cut(s) 805, 1361, 2301, 2362, 3790, 4098, 4120
BciVI GTATCC 2 cut(s) 4006, 4178
BclI TGATCA 2 cut(s) 997, 2254
BcnI CCSGG 1 cut(s) 280
BcoDI GTCTC 4 cut(s) 1197, 1479, 3932, 4157
BfaI CTAG 7 cut(s) 648, 1482, 2823, 3074, 3698, 3836, 3897
BfmI CTRYAG 4 cut(s) 533, 1697, 1864, 3992
BfuI GTATCC 2 cut(s) 4006, 4178
BglI GCCNNNNNGGC 1 cut(s) 2033
BglII AGATCT 3 cut(s) 853, 2280, 2796
Bme1390I CCNGG 8 cut(s) 280, 805, 1361, 2301, 2362, 3790, 4098, 4120
Bme18I GGWCC 4 cut(s) 1332, 2303, 3277, 3604
BmeT110I CYCGRG 1 cut(s) 3390
BmgBI CACGTC 1 cut(s) 3266
BmgT120I GGNCC 9 cut(s) 1288, 1332, 2050, 2176, 2303, 2974, 3277, 3604, 4078
BmiI GGNNCC 5 cut(s) 2305, 2975, 3202, 3459, 4071
BmrFI CCNGG 8 cut(s) 280, 805, 1361, 2301, 2362, 3790, 4098, 4120
BmrI ACTGGG 2 cut(s) 1499, 3630
BmuI ACTGGG 2 cut(s) 1499, 3630
BpiI GAAGAC 1 cut(s) 782
BplI GAGNNNNNCTC 2 cut(s) 2219, 2251
BpmI CTGGAG 4 cut(s) 2459, 3567, 3908, 4139
Bpu10I CCTNAGC 7 cut(s) 623, 629, 696, 740, 2124, 2142, 2544
BpuEI CTTGAG 4 cut(s) 896, 3409, 3907, 3957
BpuMI CCSGG 1 cut(s) 280
Bsa29I ATCGAT 1 cut(s) 2863
BsaAI YACGTR 3 cut(s) 264, 1182, 2085
BsaBI GATNNNNATC 2 cut(s) 1924, 2859
BsaHI GRCGYC 1 cut(s) 1459
BsaI GGTCTC 1 cut(s) 4157
BsaJI CCNNGG 8 cut(s) 209, 1335, 2361, 2814, 3195, 3709, 3789, 4026
BsaWI WCCGGW 1 cut(s) 505
BsaXI ACNNNNNCTCC 2 cut(s) 4047, 4077
Bse118I RCCGGY 1 cut(s) 3831
Bse1I ACTGG 8 cut(s) 165, 1505, 2028, 3265, 3625, 3676, 3952, 4180
Bse3DI GCAATG 5 cut(s) 653, 1530, 2064, 2743, 3388
Bse8I GATNNNNATC 2 cut(s) 1924, 2859
BseBI CCWGG 7 cut(s) 805, 1361, 2301, 2362, 3790, 4098, 4120
BseCI ATCGAT 1 cut(s) 2863
BseDI CCNNGG 8 cut(s) 209, 1335, 2361, 2814, 3195, 3709, 3789, 4026
BseJI GATNNNNATC 2 cut(s) 1924, 2859
BseMI GCAATG 5 cut(s) 653, 1530, 2064, 2743, 3388
BseNI ACTGG 8 cut(s) 165, 1505, 2028, 3265, 3625, 3676, 3952, 4180
BseRI GAGGAG 4 cut(s) 692, 2159, 2426, 2456
BseSI GKGCMC 1 cut(s) 1873
BseXI GCAGC 8 cut(s) 1230, 1504, 2125, 2662, 3178, 3333, 3358, 3821
BseYI CCCAGC 2 cut(s) 3576, 3951
Bsh1236I CGCG 3 cut(s) 297, 723, 1837
BshVI ATCGAT 1 cut(s) 2863
BsiHKAI GWGCWC 2 cut(s) 882, 1576
BsiHKCI CYCGRG 1 cut(s) 3390
BsiSI CCGG 3 cut(s) 280, 506, 3832
BslFI GGGAC 2 cut(s) 1487, 2289
BsmAI GTCTC 4 cut(s) 1197, 1479, 3932, 4157
BsmFI GGGAC 2 cut(s) 1487, 2289
BsmI GAATGC 3 cut(s) 2610, 3935, 4139
Bso31I GGTCTC 1 cut(s) 4157
BsoBI CYCGRG 1 cut(s) 3390
Bsp1286I GDGCHC 5 cut(s) 91, 882, 1576, 1873, 3796
Bsp1407I TGTACA 2 cut(s) 1743, 1981
Bsp19I CCATGG 2 cut(s) 3195, 3709
BspDI ATCGAT 1 cut(s) 2863
BspFNI CGCG 3 cut(s) 297, 723, 1837
BspHI TCATGA 3 cut(s) 423, 831, 1557
BspLI GGNNCC 5 cut(s) 2305, 2975, 3202, 3459, 4071
BspMAI CTGCAG 3 cut(s) 537, 1701, 3996
BspPI GGATC 9 cut(s) 537, 1371, 1803, 1933, 2126, 2257, 2297, 3663, 4130
BspTNI GGTCTC 1 cut(s) 4157
BsrDI GCAATG 5 cut(s) 653, 1530, 2064, 2743, 3388
BsrFI RCCGGY 1 cut(s) 3831
BsrGI TGTACA 2 cut(s) 1743, 1981
BsrI ACTGG 8 cut(s) 165, 1505, 2028, 3265, 3625, 3676, 3952, 4180
BssAI RCCGGY 1 cut(s) 3831
BssECI CCNNGG 8 cut(s) 209, 1335, 2361, 2814, 3195, 3709, 3789, 4026
BssNI GRCGYC 1 cut(s) 1459
BssSI CACGAG 1 cut(s) 1569
BssT1I CCWWGG 5 cut(s) 209, 2814, 3195, 3709, 4026
Bst2BI CACGAG 1 cut(s) 1569
Bst2UI CCWGG 7 cut(s) 805, 1361, 2301, 2362, 3790, 4098, 4120
Bst6I CTCTTC 2 cut(s) 1322, 1659
BstACI GRCGYC 1 cut(s) 1459
BstAUI TGTACA 2 cut(s) 1743, 1981
BstBAI YACGTR 3 cut(s) 264, 1182, 2085
BstDSI CCRYGG 3 cut(s) 1335, 3195, 3709
BstEII GGTNACC 2 cut(s) 2615, 4092
BstENI CCTNNNNNAGG 1 cut(s) 1444
BstFNI CGCG 3 cut(s) 297, 723, 1837
BstHHI GCGC 2 cut(s) 299, 1530
BstMAI GTCTC 4 cut(s) 1197, 1479, 3932, 4157
BstNI CCWGG 7 cut(s) 805, 1361, 2301, 2362, 3790, 4098, 4120
BstNSI RCATGY 2 cut(s) 458, 1567
BstPI GGTNACC 2 cut(s) 2615, 4092
BstSCI CCNGG 8 cut(s) 278, 803, 1359, 2299, 2360, 3788, 4096, 4118
BstSFI CTRYAG 4 cut(s) 533, 1697, 1864, 3992
BstSLI GKGCMC 1 cut(s) 1873
BstSNI TACGTA 2 cut(s) 1182, 2085
BstUI CGCG 3 cut(s) 297, 723, 1837
BstV1I GCAGC 8 cut(s) 1230, 1504, 2125, 2662, 3178, 3333, 3358, 3821
BstV2I GAAGAC 1 cut(s) 782
BstXI CCANNNNNNTGG 3 cut(s) 2060, 2108, 3218
Bsu15I ATCGAT 1 cut(s) 2863
BsuI GTATCC 2 cut(s) 4006, 4178
BsuTUI ATCGAT 1 cut(s) 2863
BtgI CCRYGG 3 cut(s) 1335, 3195, 3709
BtgZI GCGATG 1 cut(s) 738
BtrI CACGTC 1 cut(s) 3266
BtsI GCAGTG 1 cut(s) 2723
CaiI CAGNNNCTG 3 cut(s) 1291, 2513, 2640
CciI TCATGA 3 cut(s) 423, 831, 1557
CfoI GCGC 2 cut(s) 299, 1530
Cfr10I RCCGGY 1 cut(s) 3831
Cfr13I GGNCC 9 cut(s) 1288, 1332, 2050, 2176, 2303, 2974, 3277, 3604, 4078
ClaI ATCGAT 1 cut(s) 2863
CsiI ACCWGGT 1 cut(s) 803
CspCI CAANNNNNGTGG 2 cut(s) 2925, 2960
EaeI YGGCCR 1 cut(s) 926
Eam1104I CTCTTC 2 cut(s) 1322, 1659
EarI CTCTTC 2 cut(s) 1322, 1659
Ecl136II GAGCTC 1 cut(s) 880
Eco105I TACGTA 2 cut(s) 1182, 2085
Eco130I CCWWGG 5 cut(s) 209, 2814, 3195, 3709, 4026
Eco147I AGGCCT 1 cut(s) 1359
Eco24I GRGCYC 3 cut(s) 91, 882, 3796
Eco31I GGTCTC 1 cut(s) 4157
Eco32I GATATC 2 cut(s) 2500, 4161
Eco47I GGWCC 4 cut(s) 1332, 2303, 3277, 3604
Eco53kI GAGCTC 1 cut(s) 880
Eco57I CTGAAG 5 cut(s) 141, 371, 1404, 1895, 3159
Eco88I CYCGRG 1 cut(s) 3390
Eco91I GGTNACC 2 cut(s) 2615, 4092
EcoICRI GAGCTC 1 cut(s) 880
EcoNI CCTNNNNNAGG 1 cut(s) 1444
EcoO109I RGGNCCY 2 cut(s) 1288, 2176
EcoO65I GGTNACC 2 cut(s) 2615, 4092
EcoRI GAATTC 2 cut(s) 97, 1313
EcoRII CCWGG 7 cut(s) 803, 1359, 2299, 2360, 3788, 4096, 4118
EcoRV GATATC 2 cut(s) 2500, 4161
EcoT14I CCWWGG 5 cut(s) 209, 2814, 3195, 3709, 4026
EcoT22I ATGCAT 1 cut(s) 456
EcoT38I GRGCYC 3 cut(s) 91, 882, 3796
ErhI CCWWGG 5 cut(s) 209, 2814, 3195, 3709, 4026
FalI AAGNNNNNCTT 4 cut(s) 1380, 1412, 1638, 1670
FaqI GGGAC 2 cut(s) 1487, 2289
FauI CCCGC 2 cut(s) 70, 2646
FbaI TGATCA 2 cut(s) 997, 2254
FriOI GRGCYC 3 cut(s) 91, 882, 3796
FspBI CTAG 7 cut(s) 648, 1482, 2823, 3074, 3698, 3836, 3897
GlaI GCGC 2 cut(s) 298, 1529
GsaI CCCAGC 2 cut(s) 3580, 3955
GsuI CTGGAG 4 cut(s) 2459, 3567, 3908, 4139
HapII CCGG 3 cut(s) 280, 506, 3832
HhaI GCGC 2 cut(s) 299, 1530
Hin1I GRCGYC 1 cut(s) 1459
Hin6I GCGC 2 cut(s) 297, 1528
HinP1I GCGC 2 cut(s) 297, 1528
HincII GTYRAC 1 cut(s) 406
HindII GTYRAC 1 cut(s) 406
HindIII AAGCTT 1 cut(s) 1056
HpaI GTTAAC 1 cut(s) 406
HpaII CCGG 3 cut(s) 280, 506, 3832
Hpy99I CGWCG 1 cut(s) 1461
HpyCH4IV ACGT 9 cut(s) 47, 263, 691, 967, 1181, 1459, 2059, 2084, 3265
HpySE526I ACGT 9 cut(s) 47, 263, 691, 967, 1181, 1459, 2059, 2084, 3265
Hsp92I GRCGYC 1 cut(s) 1459
HspAI GCGC 2 cut(s) 297, 1528
Ksp22I TGATCA 2 cut(s) 997, 2254
KspAI GTTAAC 1 cut(s) 406
LmnI GCTCC 4 cut(s) 679, 1579, 3463, 4075
Lsp1109I GCAGC 8 cut(s) 1230, 1504, 2125, 2662, 3178, 3333, 3358, 3821
MabI ACCWGGT 1 cut(s) 803
MaeI CTAG 7 cut(s) 648, 1482, 2823, 3074, 3698, 3836, 3897
MaeII ACGT 9 cut(s) 47, 263, 691, 967, 1181, 1459, 2059, 2084, 3265
MaeIII GTNAC 6 cut(s) 1177, 2560, 2615, 2740, 4057, 4092
MfeI CAATTG 4 cut(s) 576, 2382, 2716, 3339
MhlI GDGCHC 5 cut(s) 91, 882, 1576, 1873, 3796
MlyI GAGTC 5 cut(s) 412, 1481, 1606, 2737, 3303
MmeI TCCRAC 1 cut(s) 884
Mph1103I ATGCAT 1 cut(s) 456
MroXI GAANNNNTTC 1 cut(s) 1653
MslI CAYNNNNRTG 9 cut(s) 1562, 2058, 2069, 2622, 2968, 3240, 3381, 3413, 4004
MspA1I CMGCKG 2 cut(s) 622, 2653
MspI CCGG 3 cut(s) 280, 506, 3832
MspR9I CCNGG 8 cut(s) 280, 805, 1361, 2301, 2362, 3790, 4098, 4120
MunI CAATTG 4 cut(s) 576, 2382, 2716, 3339
Mva1269I GAATGC 3 cut(s) 2610, 3935, 4139
MvaI CCWGG 7 cut(s) 805, 1361, 2301, 2362, 3790, 4098, 4120
MvnI CGCG 3 cut(s) 297, 723, 1837
NciI CCSGG 1 cut(s) 280
NcoI CCATGG 2 cut(s) 3195, 3709
NlaIV GGNNCC 5 cut(s) 2305, 2975, 3202, 3459, 4071
NmuCI GTSAC 3 cut(s) 2560, 2615, 2740
NsiI ATGCAT 1 cut(s) 456
NspI RCATGY 2 cut(s) 458, 1567
OliI CACNNNNGTG 1 cut(s) 4004
PaeR7I CTCGAG 1 cut(s) 3390
PagI TCATGA 3 cut(s) 423, 831, 1557
PceI AGGCCT 1 cut(s) 1359
PctI GAATGC 3 cut(s) 2610, 3935, 4139
PdmI GAANNNNTTC 1 cut(s) 1653
PfeI GAWTC 8 cut(s) 502, 782, 1411, 1649, 1895, 2335, 2791, 3900
PflFI GACNNNGTC 1 cut(s) 759
PflMI CCANNNNNTGG 1 cut(s) 3789
PleI GAGTC 5 cut(s) 412, 1481, 1606, 2737, 3303
PpsI GAGTC 5 cut(s) 412, 1481, 1606, 2737, 3303
Ppu21I YACGTR 3 cut(s) 264, 1182, 2085
PsiI TTATAA 1 cut(s) 3524
Psp124BI GAGCTC 1 cut(s) 882
Psp6I CCWGG 7 cut(s) 803, 1359, 2299, 2360, 3788, 4096, 4118
PspEI GGTNACC 2 cut(s) 2615, 4092
PspFI CCCAGC 2 cut(s) 3576, 3951
PspGI CCWGG 7 cut(s) 803, 1359, 2299, 2360, 3788, 4096, 4118
PspN4I GGNNCC 5 cut(s) 2305, 2975, 3202, 3459, 4071
PspPI GGNCC 9 cut(s) 1288, 1332, 2050, 2176, 2303, 2974, 3277, 3604, 4078
PstI CTGCAG 3 cut(s) 537, 1701, 3996
PstNI CAGNNNCTG 3 cut(s) 1291, 2513, 2640
PsyI GACNNNGTC 1 cut(s) 759
PvuII CAGCTG 1 cut(s) 622
RseI CAYNNNNRTG 9 cut(s) 1562, 2058, 2069, 2622, 2968, 3240, 3381, 3413, 4004
SacI GAGCTC 1 cut(s) 882
Sau96I GGNCC 9 cut(s) 1288, 1332, 2050, 2176, 2303, 2974, 3277, 3604, 4078
SchI GAGTC 5 cut(s) 412, 1481, 1606, 2737, 3303
ScrFI CCNGG 8 cut(s) 280, 805, 1361, 2301, 2362, 3790, 4098, 4120
SduI GDGCHC 5 cut(s) 91, 882, 1576, 1873, 3796
SexAI ACCWGGT 1 cut(s) 803
SfcI CTRYAG 4 cut(s) 533, 1697, 1864, 3992
Sfr274I CTCGAG 1 cut(s) 3390
SinI GGWCC 4 cut(s) 1332, 2303, 3277, 3604
SlaI CTCGAG 1 cut(s) 3390
SmiMI CAYNNNNRTG 9 cut(s) 1562, 2058, 2069, 2622, 2968, 3240, 3381, 3413, 4004
SmlI CTYRAG 5 cut(s) 875, 3390, 3424, 3922, 3972
SmoI CTYRAG 5 cut(s) 875, 3390, 3424, 3922, 3972
SnaBI TACGTA 2 cut(s) 1182, 2085
SseBI AGGCCT 1 cut(s) 1359
SspI AATATT 1 cut(s) 1513
SspMI CTAG 7 cut(s) 648, 1482, 2823, 3074, 3698, 3836, 3897
SstI GAGCTC 1 cut(s) 882
StuI AGGCCT 1 cut(s) 1359
StyD4I CCNGG 8 cut(s) 278, 803, 1359, 2299, 2360, 3788, 4096, 4118
StyI CCWWGG 5 cut(s) 209, 2814, 3195, 3709, 4026
TaiI ACGT 9 cut(s) 50, 266, 694, 970, 1184, 1462, 2062, 2087, 3268
TatI WGTACW 4 cut(s) 157, 1743, 1857, 1981
TauI GCSGC 3 cut(s) 35, 400, 2979
TfiI GAWTC 8 cut(s) 502, 782, 1411, 1649, 1895, 2335, 2791, 3900
TseFI GTSAC 3 cut(s) 2560, 2615, 2740
TseI GCWGC 8 cut(s) 1243, 1517, 2113, 2650, 3166, 3321, 3371, 3809
Tsp45I GTSAC 3 cut(s) 2560, 2615, 2740
TspGWI ACGGA 4 cut(s) 1324, 1753, 1790, 2480
Tth111I GACNNNGTC 1 cut(s) 759
Van91I CCANNNNNTGG 1 cut(s) 3789
VpaK11BI GGWCC 4 cut(s) 1332, 2303, 3277, 3604
XagI CCTNNNNNAGG 1 cut(s) 1444
XapI RAATTY 7 cut(s) 97, 1114, 1206, 1313, 2078, 2431, 4035
XbaI TCTAGA 1 cut(s) 1481
XceI RCATGY 2 cut(s) 458, 1567
XcmI CCANNNNNNNNNTGG 1 cut(s) 900
XhoI CTCGAG 1 cut(s) 3390
XmnI GAANNNNTTC 1 cut(s) 1653
XspI CTAG 7 cut(s) 648, 1482, 2823, 3074, 3698, 3836, 3897
ZraI GACGTC 1 cut(s) 1460
Zsp2I ATGCAT 1 cut(s) 456
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.