MD10G1337000.v1.1

Protein of unknown function (DUF751)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr10
OG0015477
Physical Location & Seq
Forward (+)
41320864 .. 41321049
186 bp
Loading structure...
UTR
Exon/CDS
Intron
MD10G1337000.v1.1.491

Sequence Viewer

Length: 186 bp
ATGGGAGCTGTTTCCGTGGGAGTTGCAGCGGCGCTGATGGCGATGGACGATCAGAAGGCGATGGCATTGGGCCCCAAAGGGCCGCTGATGGAAGAGTTTTGGGACAATGTAAGGAGATATGGACTGTATGCTCTCACGGTGAGTACAGGTGCTCTGTACGCGACCTTCGCGCCGCTGTACGAATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF751

Protein Analysis

62

Amino Acids

6.53

Weight (kDa)

4.75

Isoelectric Point (pI)

30.74

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF751 PF05421 33 - 60 2.3e-08 Protein of unknown function (DUF751)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0015477)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G16410
fragaria_vesca FvH4_3g00530
malus_domestica MD00G1057700.v1.1 MD10G1337000.v1.1
prunus_persica Prupe.4G006400_v2.0.a1
rosa_chinensis RchiOBHm_Chr5g0000731
rosa_laevigata RLG00000030890
rosa_multiflora Rmu_sc0000255.1_g000003 Rmu_sc0011992.1_g000006
rosa_roxburghii Rroxscaffold_1G00075500
rosa_rugosa Rorug04G0386100
rosa_samantha Rh5AG006000 Rh5BG007800 Rh5CG006500 Rh5DG006500
rosa_wichuraiana Rw5G000610

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 2 cut(s) 161, 170
AciI CCGC 3 cut(s) 29, 83, 173
AfaI GTAC 3 cut(s) 145, 158, 179
AluBI AGCT 1 cut(s) 8
AluI AGCT 1 cut(s) 8
Alw21I GWGCWC 1 cut(s) 154
AoxI GGCC 2 cut(s) 70, 80
ApaI GGGCCC 1 cut(s) 74
ApeKI GCWGC 1 cut(s) 26
AspLEI GCGC 2 cut(s) 34, 172
AspS9I GGNCC 3 cut(s) 70, 71, 80
AsuHPI GGTGA 1 cut(s) 151
BaeGI GKGCMC 1 cut(s) 74
BanII GRGCYC 1 cut(s) 74
BarI GAAGNNNNNNTAC 2 cut(s) 149, 181
Bbv12I GWGCWC 1 cut(s) 154
BbvI GCAGC 1 cut(s) 38
BccI CCATC 4 cut(s) 31, 37, 55, 82
BfoI RGCGCY 1 cut(s) 35
BisI GCNGC 4 cut(s) 27, 30, 83, 173
BlsI GCNGC 4 cut(s) 28, 31, 84, 174
BmgT120I GGNCC 3 cut(s) 70, 71, 80
BmiI GGNNCC 2 cut(s) 72, 73
BsaJI CCNNGG 1 cut(s) 15
BseDI CCNNGG 1 cut(s) 15
BseSI GKGCMC 1 cut(s) 74
BseXI GCAGC 1 cut(s) 38
Bsh1236I CGCG 2 cut(s) 161, 170
BshFI GGCC 2 cut(s) 72, 82
BsiHKAI GWGCWC 1 cut(s) 154
BslFI GGGAC 1 cut(s) 116
BsmFI GGGAC 1 cut(s) 116
BsnI GGCC 2 cut(s) 72, 82
Bsp120I GGGCCC 1 cut(s) 70
Bsp1286I GDGCHC 2 cut(s) 74, 154
Bsp143I GATC 1 cut(s) 49
BspACI CCGC 3 cut(s) 29, 83, 173
BspANI GGCC 2 cut(s) 72, 82
BspFNI CGCG 2 cut(s) 161, 170
BspLI GGNNCC 2 cut(s) 72, 73
BssECI CCNNGG 1 cut(s) 15
BssMI GATC 1 cut(s) 49
Bst4CI ACNGT 2 cut(s) 126, 139
Bst6I CTCTTC 1 cut(s) 87
BstDSI CCRYGG 1 cut(s) 15
BstFNI CGCG 2 cut(s) 161, 170
BstH2I RGCGCY 1 cut(s) 35
BstHHI GCGC 2 cut(s) 34, 172
BstKTI GATC 1 cut(s) 52
BstMBI GATC 1 cut(s) 49
BstMWI GCNNNNNNNGC 3 cut(s) 38, 158, 167
BstSLI GKGCMC 1 cut(s) 74
BstUI CGCG 2 cut(s) 161, 170
BstV1I GCAGC 1 cut(s) 38
BsuRI GGCC 2 cut(s) 72, 82
BtgI CCRYGG 1 cut(s) 15
BtgZI GCGATG 2 cut(s) 56, 74
CfoI GCGC 2 cut(s) 34, 172
Cfr13I GGNCC 3 cut(s) 70, 71, 80
Csp6I GTAC 3 cut(s) 144, 157, 178
CviJI RGCY 3 cut(s) 8, 72, 82
CviKI_1 RGCY 3 cut(s) 8, 72, 82
CviQI GTAC 3 cut(s) 144, 157, 178
DpnI GATC 1 cut(s) 51
DpnII GATC 1 cut(s) 49
Eam1104I CTCTTC 1 cut(s) 87
EarI CTCTTC 1 cut(s) 87
Eco24I GRGCYC 1 cut(s) 74
EcoO109I RGGNCCY 1 cut(s) 71
EcoT38I GRGCYC 1 cut(s) 74
FaiI YATR 2 cut(s) 120, 129
FaqI GGGAC 1 cut(s) 116
Fnu4HI GCNGC 4 cut(s) 27, 30, 83, 173
FriOI GRGCYC 1 cut(s) 74
Fsp4HI GCNGC 4 cut(s) 27, 30, 83, 173
GlaI GCGC 2 cut(s) 33, 171
GluI GCNGC 4 cut(s) 27, 30, 83, 173
HaeII RGCGCY 1 cut(s) 35
HaeIII GGCC 2 cut(s) 72, 82
HhaI GCGC 2 cut(s) 34, 172
Hin6I GCGC 2 cut(s) 32, 170
HinP1I GCGC 2 cut(s) 32, 170
HphI GGTGA 1 cut(s) 151
Hpy188I TCNGA 1 cut(s) 54
HpyAV CCTTC 2 cut(s) 49, 175
HpyCH4III ACNGT 2 cut(s) 126, 139
HpyCH4V TGCA 1 cut(s) 26
HpyF10VI GCNNNNNNNGC 3 cut(s) 38, 158, 167
HspAI GCGC 2 cut(s) 32, 170
Kzo9I GATC 1 cut(s) 49
LmnI GCTCC 1 cut(s) 5
LpnPI CCDG 1 cut(s) 132
Lsp1109I GCAGC 1 cut(s) 38
MalI GATC 1 cut(s) 51
MboI GATC 1 cut(s) 49
MboII GAAGA 1 cut(s) 104
MhlI GDGCHC 2 cut(s) 74, 154
MspA1I CMGCKG 3 cut(s) 29, 85, 175
MvnI CGCG 2 cut(s) 161, 170
MwoI GCNNNNNNNGC 3 cut(s) 38, 158, 167
NdeII GATC 1 cut(s) 49
NlaIV GGNNCC 2 cut(s) 72, 73
PkrI GCNGC 4 cut(s) 28, 31, 84, 174
PspN4I GGNNCC 2 cut(s) 72, 73
PspOMI GGGCCC 1 cut(s) 70
PspPI GGNCC 3 cut(s) 70, 71, 80
RsaI GTAC 3 cut(s) 145, 158, 179
RsaNI GTAC 3 cut(s) 144, 157, 178
SatI GCNGC 4 cut(s) 27, 30, 83, 173
Sau3AI GATC 1 cut(s) 49
Sau96I GGNCC 3 cut(s) 70, 71, 80
SduI GDGCHC 2 cut(s) 74, 154
SetI ASST 3 cut(s) 10, 151, 167
SgeI CNNG 5 cut(s) 28, 148, 159, 172, 181
SsiI CCGC 3 cut(s) 29, 83, 173
TaaI ACNGT 2 cut(s) 126, 139
TatI WGTACW 1 cut(s) 143
TauI GCSGC 3 cut(s) 32, 85, 175
TseI GCWGC 1 cut(s) 26
TspGWI ACGGA 1 cut(s) 4
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.