Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr11

Orthogroup ID

OG0014564

Physical Location & Seq

Genomic Coordinates Reverse (-)

5933673 .. 5937299

Gene Structure 3627 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD11G1069200.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2265 bp

ATGTATGTTTATAATGTTGTCTTGAATCGGGACTTGCAGAGGGTATCCCGTGCAACTGTGCTCACATTGGCTTATCAAAGCCTGGGAGTGGTGTATGGTGACTTAAGTACATCCCCTCTATATGTTTATAAGACCACGTTCTCCGGAAAGTTGAGCCTTCGTGAGGATGATGAAGAGATTTTTGGCGTCCTTTCGTTTATTTTCTGGACGTTTACTCTAATTGCGCTCTTCAAGTATGTTTTCATTGTGATGTTGGCTGATGACAATGGTGAAGGCGGTACCTTTGCTTTGTACTCCCTCCTCTGTCGTCATGCAAGATTAAGCATTCTGCCAAATCAAGAAATCACAGATGAGAAGTTGTCTGAATATGTGACGGAAGGAACCACAGAAACATGGCAGAGTTCAGCTCTGAAATCGTTCTTTGACAAGCATCCAAGATTTCGCAAAGGGCTGCTGGTTTTTGTTCTATTTGGAACCTGTATGGCAATTGGTGATGGTGTACTCACTCCTGCAATATCAGTTCTTTCAGCAGTCTCCGGGATTAAGCTTAAAATCACAGGACTCCACGACAATTATGTTGTTATAATCTCATGTGTCGTCTTAGTGGGGCTTTTCTCCCTTCAGCATCACGGAACACACAGAGTTGCTTTCATGTTTGCTCCGATTGTTACAGCATGGCTTCTGTGTATTAGTGGCATTGGAATATACAACGTATTTCGGTGGAACAAACGTATATTTCATGCCCTTTCTCCAGTTTATATGTTAAAGTTCCTTCGAAGCACAGGCATTGAAGGATGGGTATCCTTGGCGGGAGTTGTTCTTTCAATAACAGGTGTAGAGGCGATGTTTGCTAACTTGGGCCATTTCTCTCCGCTCTCAATAAAGATGGCCTTCACATTACTCGTATATCCCTCTCTAGTTCTTTCATACATGGGTGAGGCTGCGTTTCTTTCTAAGCACCACGAAGACATCCAAAGAAGTTTCTATGAAGCCATACCAGAGGCTGTGTTTTGGCCAGTGTTCATAGTTGCCACTTTTGCATCTGTTGTCGGAAGCCAGGCAGTAATTTCAGCTACCTTCTCCGTTATAAACCAGTGCTGTGCACTGAAATGCTTTCCCCGCGTCAAGATAGTTCATACTTCGAGTAAAATATATGGCCAAATATACATTCCAGAGGTCAACTGGATGTTAATGTGCCTTTGTTTAGGCGTGACAATTGGATTGAGGGACACAAACATGATGGGTCATGCATACGGTTTGGCAGTCACAGCTGTAATGTTTGTGACAACTTGCTTGATGGCTCTGGTGATGATAATAGTCTGGAAGAAAAGCATAATAACTGCATTAGCGTTTTTAATGCTCTTTGGATCAATTGAGCTGGTTTACATTTCAGCATCCGTCAGCAAGATCCCAGAAGGTGGATGGATCCCGGTTGTGCTCTCTCTGATCTTTATGGGTGTAATGTACATATGGAACTACGGAACAATGATGAAACACCAATTTGATGTTGAAAACAAGGTCTCAATCAATAGAATAGTGAGCTTAGGTCCGAGCCTTGGCATGGTTCGGGTCCCTGGAATTGGACTCATGTACACTAATTTGGCGACTGGGGTACCAGCTATTTTCGGACACTTTGTAACTAATCTACCTGCATTCCATAAGGTGCTGGTTTTTGTTTGCATCAAATCTGTTCAAGTTCCCCATGTTAGTGGAAATGAAAGATTGCTTGTTAGTAGGGTGGGCCCAAAGGAGTATGGACTGTTCCGGTGCATTGTGAGGTACGGTTATAAGGATCTTCAACAGGAAACCTGTAATTTTGAGAACATATTGGTGTCTAGTATAGTGCACTTTGTAGAAACAGAGGAAGAAGGTCCTTTGAGACCGATAACCGGGTGCTCTAGACAGTTTACTGATGCAGATTCCGAGCCCCCTTATGCTCCAGATCGCACTTTCATGGACTCGACCAAAAAAGAAAACACAGTGCAGTTTTCATGTGATCTTCAAGTGATAAAACCTGGTATCAGGCAAGCGGAAAGTTCTCTTTGCAAAGACGAGTCCCTGCGAATATTAGAAGCCAAAGAATCTGGTGTCACATACATTTTCGGGCATTCGCATGCACAGGCAAAGAAGTCATCATCCTTTTTCAAGAAACTTGTTATAGATATCGTCTATGCTTTTCTGAGCAAGAACTGCAGAGAGCCGGATGTTGTTCTGAATGTCCCGCATACTTCTTTGCTGGAAGTTGGTATGATCTACTACGTCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215 GO:0005575 GO:0005623 GO:0005886 GO:0006810 GO:0006811 GO:0006812 GO:0006813 GO:0008150 GO:0008324 GO:0009987 GO:0015075 GO:0015077 GO:0015079 GO:0015318 GO:0015672 GO:0016020 GO:0022857 GO:0022890 GO:0030001 GO:0034220 GO:0044464 GO:0046873 GO:0051179 GO:0051234 GO:0055085 GO:0071804 GO:0071805 GO:0071944 GO:0098655 GO:0098660 GO:0098662

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

K_trans

Protein Analysis

755

Amino Acids

84.05

Weight (kDa)

8.31

Isoelectric Point (pI)

32.54

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
K_trans	PF02705	23 - 513	1.2e-162	K+ potassium transporter integral membrane domain
K_trans_C	PF22776	525 - 752	5.7e-26	K+ potassium transporter C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0014564)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G30070 AT2G30070
fragaria_vesca	FvH4_3g39040
malus_domestica	MD11G1069200.v1.1
prunus_persica	Prupe.6G054100_v2.0.a1 Prupe.6G054100_v2.0.a1
pyrus_communis	pycom11g05770
rosa_chinensis	RchiOBHm_Chr5g0070351
rosa_laevigata	RLG00000036127
rosa_multiflora	Rmu_sc0007961.1_g000020
rosa_roxburghii	Rroxscaffold_1G00010830
rosa_rugosa	Rorug05G0405200
rosa_samantha	Rh5AG460800 Rh5BG479100 Rh5CG503300 Rh5DG491000
rosa_wichuraiana	Rw5G042950

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	5 cut(s)	12, 129, 584, 1088, 1788
Acc36I	ACCTGC	1 cut(s)	1657
Acc65I	GGTACC	2 cut(s)	278, 1612
AccB1I	GGYRCC	2 cut(s)	278, 1612
AccB7I	CCANNNNNTGG	1 cut(s)	1418
AccBSI	CCGCTC	1 cut(s)	874
AccII	CGCG	1 cut(s)	1122
AccIII	TCCGGA	1 cut(s)	143
AciI	CCGC	6 cut(s)	276, 809, 872, 1120, 2030, 2222
AclWI	GGATC	5 cut(s)	1375, 1402, 1420, 1433, 1800
AcoI	YGGCCR	2 cut(s)	1013, 1156
AcuI	CTGAAG	1 cut(s)	605
AcyI	GRCGYC	1 cut(s)	186
AfaI	GTAC	8 cut(s)	109, 280, 293, 501, 1466, 1592, 1614, 1781
AfiI	CCNNNNNNNGG	7 cut(s)	88, 163, 1418, 1556, 1561, 1580, 1889
AflII	CTTAAG	1 cut(s)	103
AgsI	TTSAA	9 cut(s)	25, 232, 791, 825, 1511, 1694, 1799, 2003, 2146
AjnI	CCWGG	4 cut(s)	81, 1056, 1573, 2014
AjuI	GAANNNNNNNTTGG	4 cut(s)	165, 197, 1152, 1184
AluBI	AGCT	7 cut(s)	407, 547, 1073, 1271, 1378, 1542, 1619
AluI	AGCT	7 cut(s)	407, 547, 1073, 1271, 1378, 1542, 1619
Alw21I	GWGCWC	5 cut(s)	63, 1105, 1440, 1848, 1898
Alw26I	GTCTC	3 cut(s)	538, 1525, 1873
Alw44I	GTGCAC	2 cut(s)	1101, 1844
AlwI	GGATC	5 cut(s)	1375, 1402, 1420, 1433, 1800
AlwNI	CAGNNNCTG	1 cut(s)	1004
Aor13HI	TCCGGA	1 cut(s)	143
AoxI	GGCC	5 cut(s)	859, 888, 1013, 1156, 1741
ApaI	GGGCCC	1 cut(s)	1745
ApaLI	GTGCAC	2 cut(s)	1101, 1844
ApeKI	GCWGC	2 cut(s)	451, 941
Asp700I	GAANNNNTTC	1 cut(s)	416
Asp718I	GGTACC	2 cut(s)	278, 1612
AspLEI	GCGC	1 cut(s)	226
AspS9I	GGNCC	6 cut(s)	859, 1547, 1570, 1741, 1742, 1871
AsuC2I	CCSGG	3 cut(s)	538, 1430, 1891
AsuHPI	GGTGA	5 cut(s)	110, 281, 503, 947, 1318
AsuII	TTCGAA	1 cut(s)	775
AvaII	GGWCC	3 cut(s)	1547, 1570, 1871
BaeGI	GKGCMC	3 cut(s)	1105, 1745, 1848
BaeI	ACNNNNGTAYC	2 cut(s)	1596, 1629
BalI	TGGCCA	2 cut(s)	1015, 1158
BamHI	GGATCC	1 cut(s)	1425
BanI	GGYRCC	2 cut(s)	278, 1612
BanII	GRGCYC	2 cut(s)	1745, 1929
BbsI	GAAGAC	1 cut(s)	972
Bbv12I	GWGCWC	5 cut(s)	63, 1105, 1440, 1848, 1898
BbvI	GCAGC	2 cut(s)	438, 928
BccI	CCATC	6 cut(s)	488, 789, 880, 1234, 1291, 1416
BciT130I	CCWGG	4 cut(s)	83, 1058, 1575, 2016
BciVI	GTATCC	2 cut(s)	55, 811
BcnI	CCSGG	3 cut(s)	538, 1430, 1891
BcoDI	GTCTC	3 cut(s)	538, 1525, 1873
BfaI	CTAG	3 cut(s)	917, 1836, 1899
BfmI	CTRYAG	1 cut(s)	2191
BfrI	CTTAAG	1 cut(s)	103
BfuAI	ACCTGC	1 cut(s)	1657
BfuI	GTATCC	2 cut(s)	55, 811
BisI	GCNGC	2 cut(s)	452, 942
BlsI	GCNGC	2 cut(s)	453, 943
Bme1390I	CCNGG	7 cut(s)	83, 538, 1058, 1430, 1575, 1891, 2016
Bme18I	GGWCC	3 cut(s)	1547, 1570, 1871
BmgT120I	GGNCC	6 cut(s)	859, 1547, 1570, 1741, 1742, 1871
BmiI	GGNNCC	8 cut(s)	280, 382, 475, 1427, 1571, 1572, 1614, 1743
BmrFI	CCNGG	7 cut(s)	83, 538, 1058, 1430, 1575, 1891, 2016
BmrI	ACTGGG	1 cut(s)	1617
BmsI	GCATC	6 cut(s)	439, 634, 1049, 1403, 1689, 1903
BmuI	ACTGGG	1 cut(s)	1617
BpiI	GAAGAC	1 cut(s)	972
BplI	GAGNNNNNCTC	2 cut(s)	391, 423
BpmI	CTGGAG	2 cut(s)	735, 1923
Bpu10I	CCTNAGC	1 cut(s)	1543
Bpu14I	TTCGAA	1 cut(s)	775
BpuMI	CCSGG	3 cut(s)	538, 1430, 1891
BsaBI	GATNNNNATC	1 cut(s)	799
BsaHI	GRCGYC	1 cut(s)	186
BsaI	GGTCTC	2 cut(s)	1525, 1873
BsaJI	CCNNGG	4 cut(s)	82, 804, 1555, 1573
BsaWI	WCCGGW	2 cut(s)	143, 1764
Bsc4I	CCNNNNNNNGG	7 cut(s)	88, 163, 1418, 1556, 1561, 1580, 1889
Bse1I	ACTGG	5 cut(s)	752, 1016, 1093, 1187, 1612
Bse8I	GATNNNNATC	1 cut(s)	799
BseAI	TCCGGA	1 cut(s)	143
BseBI	CCWGG	4 cut(s)	83, 1058, 1575, 2016
BseDI	CCNNGG	4 cut(s)	82, 804, 1555, 1573
BseJI	GATNNNNATC	1 cut(s)	799
BseLI	CCNNNNNNNGG	7 cut(s)	88, 163, 1418, 1556, 1561, 1580, 1889
BseMII	CTCAG	1 cut(s)	2171
BseNI	ACTGG	5 cut(s)	752, 1016, 1093, 1187, 1612
BseRI	GAGGAG	1 cut(s)	290
BseSI	GKGCMC	3 cut(s)	1105, 1745, 1848
BseXI	GCAGC	2 cut(s)	438, 928
BsgI	GTGCAG	1 cut(s)	2003
Bsh1236I	CGCG	1 cut(s)	1122
BshFI	GGCC	5 cut(s)	861, 890, 1015, 1158, 1743
BshNI	GGYRCC	2 cut(s)	278, 1612
BsiHKAI	GWGCWC	5 cut(s)	63, 1105, 1440, 1848, 1898
BsiSI	CCGG	6 cut(s)	144, 537, 1430, 1765, 1890, 2201
BslFI	GGGAC	5 cut(s)	44, 1241, 1556, 2041, 2204
BslI	CCNNNNNNNGG	7 cut(s)	88, 163, 1418, 1556, 1561, 1580, 1889
BsmAI	GTCTC	3 cut(s)	538, 1525, 1873
BsmFI	GGGAC	5 cut(s)	44, 1241, 1556, 2041, 2204
BsmI	GAATGC	3 cut(s)	324, 1652, 2107
BsnI	GGCC	5 cut(s)	861, 890, 1015, 1158, 1743
Bso31I	GGTCTC	2 cut(s)	1525, 1873
Bsp119I	TTCGAA	1 cut(s)	775
Bsp120I	GGGCCC	1 cut(s)	1741
Bsp1286I	GDGCHC	7 cut(s)	63, 1105, 1440, 1745, 1848, 1898, 1929
Bsp13I	TCCGGA	1 cut(s)	143
Bsp1407I	TGTACA	2 cut(s)	1464, 1590
Bsp143I	GATC	8 cut(s)	1367, 1407, 1425, 1446, 1792, 1942, 1996, 2250
BspACI	CCGC	6 cut(s)	276, 809, 872, 1120, 2030, 2222
BspANI	GGCC	5 cut(s)	861, 890, 1015, 1158, 1743
BspCNI	CTCAG	1 cut(s)	2172
BspEI	TCCGGA	1 cut(s)	143
BspFNI	CGCG	1 cut(s)	1122
BspLI	GGNNCC	8 cut(s)	280, 382, 475, 1427, 1571, 1572, 1614, 1743
BspMAI	CTGCAG	1 cut(s)	2195
BspMI	ACCTGC	1 cut(s)	1657
BspPI	GGATC	5 cut(s)	1375, 1402, 1420, 1433, 1800
BspQI	GCTCTTC	1 cut(s)	233
BspT104I	TTCGAA	1 cut(s)	775
BspT107I	GGYRCC	2 cut(s)	278, 1612
BspTI	CTTAAG	1 cut(s)	103
BspTNI	GGTCTC	2 cut(s)	1525, 1873
BsrBI	CCGCTC	1 cut(s)	874
BsrGI	TGTACA	2 cut(s)	1464, 1590
BsrI	ACTGG	5 cut(s)	752, 1016, 1093, 1187, 1612
BssECI	CCNNGG	4 cut(s)	82, 804, 1555, 1573
BssMI	GATC	8 cut(s)	1367, 1407, 1425, 1446, 1792, 1942, 1996, 2250
BssNI	GRCGYC	1 cut(s)	186
BssT1I	CCWWGG	2 cut(s)	804, 1555
Bst2UI	CCWGG	4 cut(s)	83, 1058, 1575, 2016
Bst4CI	ACNGT	6 cut(s)	58, 1256, 1761, 1784, 1905, 1981
Bst6I	CTCTTC	2 cut(s)	168, 233
BstACI	GRCGYC	1 cut(s)	186
BstAFI	CTTAAG	1 cut(s)	103
BstAPI	GCANNNNNTGC	1 cut(s)	2190
BstAUI	TGTACA	2 cut(s)	1464, 1590
BstBI	TTCGAA	1 cut(s)	775
BstC8I	GCNNGC	2 cut(s)	2028, 2115
BstDEI	CTNAG	4 cut(s)	601, 954, 1543, 2180
BstENI	CCTNNNNNAGG	1 cut(s)	161
BstFNI	CGCG	1 cut(s)	1122
BstHHI	GCGC	1 cut(s)	226
BstKTI	GATC	8 cut(s)	1370, 1410, 1428, 1449, 1795, 1945, 1999, 2253
BstMAI	GTCTC	3 cut(s)	538, 1525, 1873
BstMBI	GATC	8 cut(s)	1367, 1407, 1425, 1446, 1792, 1942, 1996, 2250
BstMWI	GCNNNNNNNGC	5 cut(s)	848, 1037, 1119, 1268, 2190
BstNI	CCWGG	4 cut(s)	83, 1058, 1575, 2016
BstNSI	RCATGY	1 cut(s)	2117
BstSCI	CCNGG	7 cut(s)	81, 536, 1056, 1428, 1573, 1889, 2014
BstSFI	CTRYAG	1 cut(s)	2191
BstSLI	GKGCMC	3 cut(s)	1105, 1745, 1848
BstUI	CGCG	1 cut(s)	1122
BstV1I	GCAGC	2 cut(s)	438, 928
BstV2I	GAAGAC	1 cut(s)	972
BstX2I	RGATCY	3 cut(s)	1407, 1425, 1792
BstXI	CCANNNNNNTGG	1 cut(s)	1709
BstYI	RGATCY	3 cut(s)	1407, 1425, 1792
BsuI	GTATCC	2 cut(s)	55, 811
BsuRI	GGCC	5 cut(s)	861, 890, 1015, 1158, 1743
BtgZI	GCGATG	1 cut(s)	857
BtsIMutI	CAGTG	4 cut(s)	1023, 1100, 1103, 1986
BveI	ACCTGC	1 cut(s)	1657
Cac8I	GCNNGC	2 cut(s)	2028, 2115
CaiI	CAGNNNCTG	1 cut(s)	1004
CfoI	GCGC	1 cut(s)	226
Cfr13I	GGNCC	6 cut(s)	859, 1547, 1570, 1741, 1742, 1871
CseI	GACGC	2 cut(s)	175, 1111
CsiI	ACCWGGT	1 cut(s)	2014
Csp6I	GTAC	8 cut(s)	108, 279, 292, 500, 1465, 1591, 1613, 1780
CviQI	GTAC	8 cut(s)	108, 279, 292, 500, 1465, 1591, 1613, 1780
DdeI	CTNAG	4 cut(s)	601, 954, 1543, 2180
DpnI	GATC	8 cut(s)	1369, 1409, 1427, 1448, 1794, 1944, 1998, 2252
DpnII	GATC	8 cut(s)	1367, 1407, 1425, 1446, 1792, 1942, 1996, 2250
EaeI	YGGCCR	2 cut(s)	1013, 1156
Eam1104I	CTCTTC	2 cut(s)	168, 233
EarI	CTCTTC	2 cut(s)	168, 233
Eco130I	CCWWGG	2 cut(s)	804, 1555
Eco24I	GRGCYC	2 cut(s)	1745, 1929
Eco31I	GGTCTC	2 cut(s)	1525, 1873
Eco32I	GATATC	1 cut(s)	2164
Eco47I	GGWCC	3 cut(s)	1547, 1570, 1871
Eco57I	CTGAAG	1 cut(s)	605
EcoNI	CCTNNNNNAGG	1 cut(s)	161
EcoO109I	RGGNCCY	2 cut(s)	1570, 1871
EcoRII	CCWGG	4 cut(s)	81, 1056, 1573, 2014
EcoRV	GATATC	1 cut(s)	2164
EcoT14I	CCWWGG	2 cut(s)	804, 1555
EcoT22I	ATGCAT	1 cut(s)	1252
EcoT38I	GRGCYC	2 cut(s)	1745, 1929
ErhI	CCWWGG	2 cut(s)	804, 1555
FalI	AAGNNNNNCTT	2 cut(s)	875, 907
FaqI	GGGAC	5 cut(s)	44, 1241, 1556, 2041, 2204
FauI	CCCGC	3 cut(s)	802, 1127, 2229
FauNDI	CATATG	1 cut(s)	1469
Fnu4HI	GCNGC	2 cut(s)	452, 942
FriOI	GRGCYC	2 cut(s)	1745, 1929
Fsp4HI	GCNGC	2 cut(s)	452, 942
FspBI	CTAG	3 cut(s)	917, 1836, 1899
GlaI	GCGC	1 cut(s)	225
GluI	GCNGC	2 cut(s)	452, 942
GsuI	CTGGAG	2 cut(s)	735, 1923
HaeIII	GGCC	5 cut(s)	861, 890, 1015, 1158, 1743
HapII	CCGG	6 cut(s)	144, 537, 1430, 1765, 1890, 2201
HgaI	GACGC	2 cut(s)	175, 1111
HhaI	GCGC	1 cut(s)	226
Hin1I	GRCGYC	1 cut(s)	186
Hin6I	GCGC	1 cut(s)	224
HinP1I	GCGC	1 cut(s)	224
HincII	GTYRAC	1 cut(s)	1180
HindII	GTYRAC	1 cut(s)	1180
HindIII	AAGCTT	1 cut(s)	545
HinfI	GANTC	7 cut(s)	25, 561, 1584, 1919, 1958, 2054, 2081
HpaII	CCGG	6 cut(s)	144, 537, 1430, 1765, 1890, 2201
HphI	GGTGA	5 cut(s)	110, 281, 503, 947, 1318
Hpy166II	GTNNAC	8 cut(s)	213, 500, 1103, 1180, 1384, 1593, 1846, 1908
Hpy8I	GTNNAC	8 cut(s)	213, 500, 1103, 1180, 1384, 1593, 1846, 1908
HpyCH4III	ACNGT	6 cut(s)	58, 1256, 1761, 1784, 1905, 1981
HpyCH4IV	ACGT	5 cut(s)	137, 209, 711, 730, 2259
HpyF10VI	GCNNNNNNNGC	5 cut(s)	848, 1037, 1119, 1268, 2190
HpyF3I	CTNAG	4 cut(s)	601, 954, 1543, 2180
HpySE526I	ACGT	5 cut(s)	137, 209, 711, 730, 2259
Hsp92I	GRCGYC	1 cut(s)	186
HspAI	GCGC	1 cut(s)	224
KflI	GGGWCCC	1 cut(s)	1570
Kpn2I	TCCGGA	1 cut(s)	143
KpnI	GGTACC	2 cut(s)	282, 1616
Kzo9I	GATC	8 cut(s)	1367, 1407, 1425, 1446, 1792, 1942, 1996, 2250
LguI	GCTCTTC	1 cut(s)	233
LmnI	GCTCC	2 cut(s)	664, 1942
Lsp1109I	GCAGC	2 cut(s)	438, 928
LweI	GCATC	6 cut(s)	439, 634, 1049, 1403, 1689, 1903
MabI	ACCWGGT	1 cut(s)	2014
MaeI	CTAG	3 cut(s)	917, 1836, 1899
MaeII	ACGT	5 cut(s)	137, 209, 711, 730, 2259
MaeIII	GTNAC	8 cut(s)	98, 370, 667, 1210, 1264, 1282, 1636, 2089
MalI	GATC	8 cut(s)	1369, 1409, 1427, 1448, 1794, 1944, 1998, 2252
MbiI	CCGCTC	1 cut(s)	874
MboI	GATC	8 cut(s)	1367, 1407, 1425, 1446, 1792, 1942, 1996, 2250
MboII	GAAGA	7 cut(s)	185, 220, 977, 1336, 1787, 1877, 1991
MfeI	CAATTG	3 cut(s)	486, 1215, 1371
MflI	RGATCY	3 cut(s)	1407, 1425, 1792
MhlI	GDGCHC	7 cut(s)	63, 1105, 1440, 1745, 1848, 1898, 1929
MlsI	TGGCCA	2 cut(s)	1015, 1158
MluNI	TGGCCA	2 cut(s)	1015, 1158
MlyI	GAGTC	4 cut(s)	555, 1578, 1952, 2063
MmeI	TCCRAC	1 cut(s)	1030
Mox20I	TGGCCA	2 cut(s)	1015, 1158
Mph1103I	ATGCAT	1 cut(s)	1252
MroI	TCCGGA	1 cut(s)	143
MroXI	GAANNNNTTC	1 cut(s)	416
MscI	TGGCCA	2 cut(s)	1015, 1158
MseI	TTAA	7 cut(s)	104, 320, 543, 549, 764, 1190, 1355
MslI	CAYNNNNRTG	7 cut(s)	248, 1108, 1235, 1707, 1829, 1952, 2112
Msp20I	TGGCCA	2 cut(s)	1015, 1158
MspA1I	CMGCKG	1 cut(s)	1271
MspCI	CTTAAG	1 cut(s)	103
MspI	CCGG	6 cut(s)	144, 537, 1430, 1765, 1890, 2201
MspR9I	CCNGG	7 cut(s)	83, 538, 1058, 1430, 1575, 1891, 2016
MunI	CAATTG	3 cut(s)	486, 1215, 1371
Mva1269I	GAATGC	3 cut(s)	324, 1652, 2107
MvaI	CCWGG	4 cut(s)	83, 1058, 1575, 2016
MvnI	CGCG	1 cut(s)	1122
MwoI	GCNNNNNNNGC	5 cut(s)	848, 1037, 1119, 1268, 2190
NciI	CCSGG	3 cut(s)	538, 1430, 1891
NdeI	CATATG	1 cut(s)	1469
NdeII	GATC	8 cut(s)	1367, 1407, 1425, 1446, 1792, 1942, 1996, 2250
NlaIV	GGNNCC	8 cut(s)	280, 382, 475, 1427, 1571, 1572, 1614, 1743
NmuCI	GTSAC	6 cut(s)	98, 370, 1210, 1264, 1282, 2089
NsiI	ATGCAT	1 cut(s)	1252
NspI	RCATGY	1 cut(s)	2117
NspV	TTCGAA	1 cut(s)	775
PaeI	GCATGC	1 cut(s)	2117
PciSI	GCTCTTC	1 cut(s)	233
PctI	GAATGC	3 cut(s)	324, 1652, 2107
PdmI	GAANNNNTTC	1 cut(s)	416
PfeI	GAWTC	3 cut(s)	25, 1919, 2081
PflMI	CCANNNNNTGG	1 cut(s)	1418
PfoI	TCCNGGA	1 cut(s)	536
PkrI	GCNGC	2 cut(s)	453, 943
PleI	GAGTC	4 cut(s)	555, 1578, 1952, 2062
PpsI	GAGTC	4 cut(s)	555, 1578, 1952, 2062
PpuMI	RGGWCCY	2 cut(s)	1570, 1871
PsiI	TTATAA	5 cut(s)	12, 129, 584, 1088, 1788
Psp5II	RGGWCCY	2 cut(s)	1570, 1871
Psp6I	CCWGG	4 cut(s)	81, 1056, 1573, 2014
PspGI	CCWGG	4 cut(s)	81, 1056, 1573, 2014
PspN4I	GGNNCC	8 cut(s)	280, 382, 475, 1427, 1571, 1572, 1614, 1743
PspOMI	GGGCCC	1 cut(s)	1741
PspPI	GGNCC	6 cut(s)	859, 1547, 1570, 1741, 1742, 1871
PspPPI	RGGWCCY	2 cut(s)	1570, 1871
PsrI	GAACNNNNNNTAC	2 cut(s)	1745, 1777
PstI	CTGCAG	1 cut(s)	2195
PstNI	CAGNNNCTG	1 cut(s)	1004
PsuI	RGATCY	3 cut(s)	1407, 1425, 1792
PvuII	CAGCTG	1 cut(s)	1271
RsaI	GTAC	8 cut(s)	109, 280, 293, 501, 1466, 1592, 1614, 1781
RsaNI	GTAC	8 cut(s)	108, 279, 292, 500, 1465, 1591, 1613, 1780
RseI	CAYNNNNRTG	7 cut(s)	248, 1108, 1235, 1707, 1829, 1952, 2112
SapI	GCTCTTC	1 cut(s)	233
SaqAI	TTAA	7 cut(s)	104, 320, 543, 549, 764, 1190, 1355
SatI	GCNGC	2 cut(s)	452, 942
Sau3AI	GATC	8 cut(s)	1367, 1407, 1425, 1446, 1792, 1942, 1996, 2250
Sau96I	GGNCC	6 cut(s)	859, 1547, 1570, 1741, 1742, 1871
SchI	GAGTC	4 cut(s)	555, 1578, 1952, 2063
ScrFI	CCNGG	7 cut(s)	83, 538, 1058, 1430, 1575, 1891, 2016
SduI	GDGCHC	7 cut(s)	63, 1105, 1440, 1745, 1848, 1898, 1929
SexAI	ACCWGGT	1 cut(s)	2014
SfaNI	GCATC	6 cut(s)	439, 634, 1049, 1403, 1689, 1903
SfcI	CTRYAG	1 cut(s)	2191
SfuI	TTCGAA	1 cut(s)	775
SinI	GGWCC	3 cut(s)	1547, 1570, 1871
SmiMI	CAYNNNNRTG	7 cut(s)	248, 1108, 1235, 1707, 1829, 1952, 2112
SmlI	CTYRAG	1 cut(s)	103
SmoI	CTYRAG	1 cut(s)	103
SphI	GCATGC	1 cut(s)	2117
SsiI	CCGC	6 cut(s)	276, 809, 872, 1120, 2030, 2222
SspI	AATATT	1 cut(s)	2067
SspMI	CTAG	3 cut(s)	917, 1836, 1899
StyD4I	CCNGG	7 cut(s)	81, 536, 1056, 1428, 1573, 1889, 2014
StyI	CCWWGG	2 cut(s)	804, 1555
TaaI	ACNGT	6 cut(s)	58, 1256, 1761, 1784, 1905, 1981
TaiI	ACGT	5 cut(s)	140, 212, 714, 733, 2262
TaqI	TCGA	3 cut(s)	775, 1142, 1961
TaqII	GACCGA	1 cut(s)	1897
TatI	WGTACW	5 cut(s)	107, 291, 499, 1464, 1590
TfiI	GAWTC	3 cut(s)	25, 1919, 2081
Tru1I	TTAA	7 cut(s)	104, 320, 543, 549, 764, 1190, 1355
Tru9I	TTAA	7 cut(s)	104, 320, 543, 549, 764, 1190, 1355
TscAI	CASTG	4 cut(s)	1023, 1100, 1110, 1986
TseFI	GTSAC	6 cut(s)	98, 370, 1210, 1264, 1282, 2089
TseI	GCWGC	2 cut(s)	451, 941
Tsp45I	GTSAC	6 cut(s)	98, 370, 1210, 1264, 1282, 2089
TspGWI	ACGGA	5 cut(s)	389, 645, 1072, 1387, 1494
TspRI	CASTG	4 cut(s)	1023, 1100, 1110, 1986
Van91I	CCANNNNNTGG	1 cut(s)	1418
Vha464I	CTTAAG	1 cut(s)	103
VneI	GTGCAC	2 cut(s)	1101, 1844
VpaK11BI	GGWCC	3 cut(s)	1547, 1570, 1871
XagI	CCTNNNNNAGG	1 cut(s)	161
XbaI	TCTAGA	1 cut(s)	1898
XceI	RCATGY	1 cut(s)	2117
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1179, 1419
XmnI	GAANNNNTTC	1 cut(s)	416
XspI	CTAG	3 cut(s)	917, 1836, 1899
Zsp2I	ATGCAT	1 cut(s)	1252

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.