Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr5

Orthogroup ID

OG0014564

Physical Location & Seq

Genomic Coordinates Forward (+)

75084865 .. 75090282

Gene Structure 5418 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw5G042950.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2196 bp

ATGTTGTACGGCTGGAACCCATTTGCTTTGAACTTTCGGGGAAGATCATCAACTAAGGTATCTTGTGCAACTGTGCTCACATTGGCTTATCAAAGTCTGGGAGTCGTTTATGGAGACCTCAGCATATCCCCTCTATATGTTTACAAGACCACCTTCTCCGGAAAGTTGAGTCTTCATGAGGACGATGAAGAGATTTTCGGGGTGCTTTCATTTATTTTATGGACATTTACTCTCATTGCTCTCTTCAAGTATGTTTTCATTGTGATGTTGGCTGATGACAATGGTGAAGGTGGTACCTTTGCCTTATACTCCCTCCTCTGTCGTCACGCAAGATTAAGCATTCTACATCAAGAAATCACAGATGAGGATCTGTCTGAATATGTGACAGAGGGAAACAAAGATACATGGCACAGTGCAGCTCTGAAATCATTCTTCGACAAGCACCCAAGATTTCAAAAAGCGCTACTGATTTTTGTTCTGTTTGGGACCTGTATGGCAATTGGTGATGGTGTACTCACTCCTTCAATATCAGTTCTTTCAGCAGTGTCAGGGGTAAAGCTTAAGTTCACAGAACTCCATGACAATTATGTTGTTATCATCTCATGTGTCTTGCTGGTGGGGCTTTTCTCCCTTCAGCATCACGGAACACACAGAGTGGCTTTCATGTTTGCTCCAATCATTACTGCATGGCTTCTGTGCATTAGTGGCATTGGAATATACAACATAGTTCAGTGGAATCAATGCGTATTTCAAGCACTCTCTCCAGTTTACATGTTGAAGTTCCTTCAAACGACAGGCATTGAAGGATGGCTATCGTTAGCTGGTGTTGTTCTTTCAATAACAGGTGTAGAGGCAATGTTTGCTAATTTGGGCCATTTCTCTTCACTCTCGATAAAGATAGCCTTCACATGTTTAGTATATCCCTCTCTTGTTCTTTCCTACATGGGTGAGGCTGCATTTCTTTCCAAGCACCATGAAGACATCCAAAGAAGTTTTTACAAATCCATACCAGAAGCTGTGTTTTGGCCGGTGTTCATACTCGCTAGTTTTGCATCTGTGGTAGGAAGCCAGGCAGTAATTTCAGCTACCTTCTCCATTATAAGCCAGTGTTCTGCGCTGAATTGCTTTCCACGCGTCAAGATAGTTCATACTTCGAGTAAAATATACGGGCAAATATACATTCCAGAAGTCAATTGGATGTTAATGTGCCTTTGTTTAGCTGTGACAATTGGACTGAGGGATACTAATATGATGGGTCATGCATATGGGTTGGCAGTGACCACTGTAATGTTTGTGACGACTTGCTTGATGGCTCTGGCGATGATAATTGTCTGGAAAGAAAGGGTAGTTAGTGCATTAGCATTTTTACTGTTCTTTGGATCAATTGAGTTGATTTATATTTCAGCATCTGTCACGAAGATCCCCGAAGGTGGATGGATCCCGGTTCTGCTGTCTCTTGTCTTTATGGCTATAATGTACACTTGGAACTACGGGACAATGATGAAACACCAATTTGATGTTGAGAACAAGGTCTCAATTAACCGAATAGTGTGCTTAGGGCCTAGTCTGGGCATGGTTCGTGTCTCCGGAATTGGACTTGTGTACACTAATTTGGTGACTGGGGTACCAGCTGTTTTCGGACACTTTGTCACTAATCTACCCGCATTCCATAAGGTGCTGATTTTTGTTTGTGTCAAATCCGTTCAAGTTCCCCATGTTAGTGGAAAGGAAAGGTTGATCATTAGTAGGGTTGGCCCGAAGGAGTGTGGCATGTTCCGGTGCATTGTGAGGTATGGTTACAAGGATCTTCAACAGGAAAACTGTAATTTCGAGAATAAGTTGGTGTCTGGTATAGTGCAGTTTGTAGAAACAGAAGACTGTCCTGATGCTGAAGCCTTTTATGCCCCGGATGATTCGGATCAGACTTCCATGGAGTTGAAGAATGAAGAAAACACGATACAAGTTTCACGTAATCTTCAAGATGAGTCACTGCAGATATTAGAAGCCAAAGAATCTGGAGTGACTTATATTCTTGGGCATTCACATGCAAAGGCGAAGAAATCAGCATCCTTTATCAAGAAAGTTGCTATAGATAATGTGTATAATTTTCTGTGCAAGAATTGTAGAGAGCCTGATGTTGTGTTGAATGTGCCTCCTACTTCTTTGCTAGAAGTAGGTATGGTTTACTATGTTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215 GO:0005575 GO:0005623 GO:0005886 GO:0006810 GO:0006811 GO:0006812 GO:0006813 GO:0008150 GO:0008324 GO:0009987 GO:0015075 GO:0015077 GO:0015079 GO:0015318 GO:0015672 GO:0016020 GO:0022857 GO:0022890 GO:0030001 GO:0034220 GO:0044464 GO:0046873 GO:0051179 GO:0051234 GO:0055085 GO:0071804 GO:0071805 GO:0071944 GO:0098655 GO:0098660 GO:0098662

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

K_trans

Protein Analysis

731

Amino Acids

81.26

Weight (kDa)

6.47

Isoelectric Point (pI)

29.88

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
K_trans	PF02705	28 - 516	7.2e-162	K+ potassium transporter integral membrane domain
K_trans_C	PF22776	529 - 729	1.6e-25	K+ potassium transporter C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0014564)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G30070 AT2G30070
fragaria_vesca	FvH4_3g39040
malus_domestica	MD11G1069200.v1.1
prunus_persica	Prupe.6G054100_v2.0.a1 Prupe.6G054100_v2.0.a1
pyrus_communis	pycom11g05770
rosa_chinensis	RchiOBHm_Chr5g0070351
rosa_laevigata	RLG00000036127
rosa_multiflora	Rmu_sc0007961.1_g000020
rosa_roxburghii	Rroxscaffold_1G00010830
rosa_rugosa	Rorug05G0405200
rosa_samantha	Rh5AG460800 Rh5BG479100 Rh5CG503300 Rh5DG491000
rosa_wichuraiana	Rw5G042950

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1100
Acc65I	GGTACC	2 cut(s)	293, 1624
AccB1I	GGYRCC	2 cut(s)	293, 1624
AccII	CGCG	1 cut(s)	1134
AccIII	TCCGGA	2 cut(s)	158, 1586
AciI	CCGC	1 cut(s)	1662
AclWI	GGATC	7 cut(s)	375, 1387, 1414, 1432, 1445, 1812, 1926
AcoI	YGGCCR	1 cut(s)	1025
AcuI	CTGAAG	2 cut(s)	617, 1911
AdeI	CACNNNGTG	1 cut(s)	655
AfaI	GTAC	6 cut(s)	8, 295, 513, 1478, 1604, 1626
AfeI	AGCGCT	1 cut(s)	462
AfiI	CCNNNNNNNGG	2 cut(s)	1430, 1568
AflII	CTTAAG	1 cut(s)	560
AflIII	ACRYGT	3 cut(s)	771, 908, 1132
AhdI	GACNNNNNGTC	1 cut(s)	1646
AjnI	CCWGG	1 cut(s)	1068
AluBI	AGCT	7 cut(s)	419, 559, 821, 1016, 1085, 1220, 1631
AluI	AGCT	7 cut(s)	419, 559, 821, 1016, 1085, 1220, 1631
Alw21I	GWGCWC	1 cut(s)	78
Alw26I	GTCTC	4 cut(s)	108, 1458, 1537, 1588
AlwI	GGATC	7 cut(s)	375, 1387, 1414, 1432, 1445, 1812, 1926
AlwNI	CAGNNNCTG	2 cut(s)	1016, 1409
Aor13HI	TCCGGA	2 cut(s)	158, 1586
Aor51HI	AGCGCT	1 cut(s)	462
AoxI	GGCC	4 cut(s)	871, 1025, 1559, 1753
ApeKI	GCWGC	2 cut(s)	416, 953
Asp700I	GAANNNNTTC	1 cut(s)	428
Asp718I	GGTACC	2 cut(s)	293, 1624
AspLEI	GCGC	2 cut(s)	463, 1117
AspS9I	GGNCC	4 cut(s)	486, 871, 1559, 1754
AsuC2I	CCSGG	2 cut(s)	1442, 1907
AsuHPI	GGTGA	4 cut(s)	296, 515, 959, 1627
AvaII	GGWCC	1 cut(s)	486
BaeI	ACNNNNGTAYC	4 cut(s)	42, 75, 1608, 1641
BamHI	GGATCC	1 cut(s)	1437
BanI	GGYRCC	2 cut(s)	293, 1624
BbsI	GAAGAC	3 cut(s)	164, 984, 1881
Bbv12I	GWGCWC	1 cut(s)	78
BbvCI	CCTCAGC	1 cut(s)	119
BbvI	GCAGC	2 cut(s)	428, 940
BccI	CCATC	5 cut(s)	500, 801, 1246, 1303, 1428
BceAI	ACGGC	1 cut(s)	25
BcgI	CGANNNNNNTGC	2 cut(s)	1533, 1567
BciT130I	CCWGG	1 cut(s)	1070
BciVI	GTATCC	1 cut(s)	1234
BclI	TGATCA	1 cut(s)	1737
BcnI	CCSGG	2 cut(s)	1442, 1907
BcoDI	GTCTC	4 cut(s)	108, 1458, 1537, 1588
BfaI	CTAG	3 cut(s)	1044, 1563, 2168
BfmI	CTRYAG	2 cut(s)	1991, 2088
BfoI	RGCGCY	1 cut(s)	464
BfrI	CTTAAG	1 cut(s)	560
BfuI	GTATCC	1 cut(s)	1234
BisI	GCNGC	2 cut(s)	417, 954
BlsI	GCNGC	2 cut(s)	418, 955
Bme1390I	CCNGG	3 cut(s)	1070, 1442, 1907
Bme18I	GGWCC	1 cut(s)	486
BmeRI	GACNNNNNGTC	1 cut(s)	1646
BmgT120I	GGNCC	4 cut(s)	486, 871, 1559, 1754
BmiI	GGNNCC	5 cut(s)	17, 295, 487, 1439, 1626
BmrFI	CCNGG	3 cut(s)	1070, 1442, 1907
BmrI	ACTGGG	1 cut(s)	1629
BmsI	GCATC	5 cut(s)	646, 1061, 1415, 1876, 2075
BmuI	ACTGGG	1 cut(s)	1629
BpiI	GAAGAC	3 cut(s)	164, 984, 1881
BpmI	CTGGAG	2 cut(s)	747, 2037
Bpu10I	CCTNAGC	2 cut(s)	119, 1555
BpuMI	CCSGG	2 cut(s)	1442, 1907
BsaAI	YACGTR	1 cut(s)	1970
BsaBI	GATNNNNATC	3 cut(s)	366, 811, 1917
BsaI	GGTCTC	2 cut(s)	108, 1537
BsaJI	CCNNGG	2 cut(s)	1905, 1929
BsaWI	WCCGGW	3 cut(s)	158, 1586, 1776
Bsc4I	CCNNNNNNNGG	2 cut(s)	1430, 1568
Bse118I	RCCGGY	1 cut(s)	1027
Bse1I	ACTGG	3 cut(s)	764, 1105, 1624
Bse3DI	GCAATG	2 cut(s)	234, 861
Bse8I	GATNNNNATC	3 cut(s)	366, 811, 1917
BseAI	TCCGGA	2 cut(s)	158, 1586
BseBI	CCWGG	1 cut(s)	1070
BseDI	CCNNGG	2 cut(s)	1905, 1929
BseGI	GGATG	6 cut(s)	812, 981, 1203, 1439, 1915, 2066
BseJI	GATNNNNATC	3 cut(s)	366, 811, 1917
BseLI	CCNNNNNNNGG	2 cut(s)	1430, 1568
BseMI	GCAATG	2 cut(s)	234, 861
BseMII	CTCAG	2 cut(s)	133, 1226
BseNI	ACTGG	3 cut(s)	764, 1105, 1624
BseRI	GAGGAG	1 cut(s)	305
BseXI	GCAGC	2 cut(s)	428, 940
BsgI	GTGCAG	2 cut(s)	435, 1877
Bsh1236I	CGCG	1 cut(s)	1134
BshFI	GGCC	4 cut(s)	873, 1027, 1561, 1755
BshNI	GGYRCC	2 cut(s)	293, 1624
BsiHKAI	GWGCWC	1 cut(s)	78
BsiSI	CCGG	6 cut(s)	159, 1028, 1442, 1587, 1777, 1907
BslFI	GGGAC	2 cut(s)	499, 1507
BslI	CCNNNNNNNGG	2 cut(s)	1430, 1568
BsmAI	GTCTC	4 cut(s)	108, 1458, 1537, 1588
BsmFI	GGGAC	2 cut(s)	499, 1507
BsmI	GAATGC	3 cut(s)	339, 1664, 2038
BsnI	GGCC	4 cut(s)	873, 1027, 1561, 1755
Bso31I	GGTCTC	2 cut(s)	108, 1537
Bsp1286I	GDGCHC	1 cut(s)	78
Bsp13I	TCCGGA	2 cut(s)	158, 1586
Bsp1407I	TGTACA	2 cut(s)	1476, 1602
Bsp143I	GATC	8 cut(s)	44, 367, 1379, 1419, 1437, 1737, 1804, 1918
Bsp19I	CCATGG	1 cut(s)	1929
BspACI	CCGC	1 cut(s)	1662
BspANI	GGCC	4 cut(s)	873, 1027, 1561, 1755
BspCNI	CTCAG	2 cut(s)	132, 1227
BspEI	TCCGGA	2 cut(s)	158, 1586
BspFNI	CGCG	1 cut(s)	1134
BspHI	TCATGA	1 cut(s)	175
BspLI	GGNNCC	5 cut(s)	17, 295, 487, 1439, 1626
BspMAI	CTGCAG	1 cut(s)	1995
BspPI	GGATC	7 cut(s)	375, 1387, 1414, 1432, 1445, 1812, 1926
BspT107I	GGYRCC	2 cut(s)	293, 1624
BspTI	CTTAAG	1 cut(s)	560
BspTNI	GGTCTC	2 cut(s)	108, 1537
BsrDI	GCAATG	2 cut(s)	234, 861
BsrFI	RCCGGY	1 cut(s)	1027
BsrGI	TGTACA	2 cut(s)	1476, 1602
BsrI	ACTGG	3 cut(s)	764, 1105, 1624
BssAI	RCCGGY	1 cut(s)	1027
BssECI	CCNNGG	2 cut(s)	1905, 1929
BssMI	GATC	8 cut(s)	44, 367, 1379, 1419, 1437, 1737, 1804, 1918
BssT1I	CCWWGG	1 cut(s)	1929
Bst2UI	CCWGG	1 cut(s)	1070
Bst4CI	ACNGT	6 cut(s)	73, 413, 1285, 1371, 1823, 1880
Bst6I	CTCTTC	3 cut(s)	183, 248, 886
BstAFI	CTTAAG	1 cut(s)	560
BstAPI	GCANNNNNTGC	1 cut(s)	860
BstAUI	TGTACA	2 cut(s)	1476, 1602
BstBAI	YACGTR	1 cut(s)	1970
BstDEI	CTNAG	4 cut(s)	54, 119, 1235, 1555
BstDSI	CCRYGG	1 cut(s)	1929
BstF5I	GGATG	6 cut(s)	812, 981, 1203, 1439, 1915, 2066
BstFNI	CGCG	1 cut(s)	1134
BstH2I	RGCGCY	1 cut(s)	464
BstHHI	GCGC	2 cut(s)	463, 1117
BstKTI	GATC	8 cut(s)	47, 370, 1382, 1422, 1440, 1740, 1807, 1921
BstMAI	GTCTC	4 cut(s)	108, 1458, 1537, 1588
BstMBI	GATC	8 cut(s)	44, 367, 1379, 1419, 1437, 1737, 1804, 1918
BstMWI	GCNNNNNNNGC	6 cut(s)	619, 705, 860, 1049, 1131, 1901
BstNI	CCWGG	1 cut(s)	1070
BstNSI	RCATGY	4 cut(s)	775, 912, 1774, 2048
BstSCI	CCNGG	3 cut(s)	1068, 1440, 1905
BstSFI	CTRYAG	2 cut(s)	1991, 2088
BstUI	CGCG	1 cut(s)	1134
BstV1I	GCAGC	2 cut(s)	428, 940
BstV2I	GAAGAC	3 cut(s)	164, 984, 1881
BstX2I	RGATCY	4 cut(s)	367, 1419, 1437, 1804
BstXI	CCANNNNNNTGG	1 cut(s)	1721
BstYI	RGATCY	4 cut(s)	367, 1419, 1437, 1804
BsuI	GTATCC	1 cut(s)	1234
BsuRI	GGCC	4 cut(s)	873, 1027, 1561, 1755
BtgI	CCRYGG	1 cut(s)	1929
BtgZI	GCGATG	1 cut(s)	1334
BtsCI	GGATG	6 cut(s)	812, 981, 1203, 1439, 1915, 2066
BtsI	GCAGTG	3 cut(s)	549, 1281, 1988
BtsIMutI	CAGTG	7 cut(s)	418, 549, 737, 1112, 1281, 1281, 1988
CaiI	CAGNNNCTG	2 cut(s)	1016, 1409
CciI	TCATGA	1 cut(s)	175
CfoI	GCGC	2 cut(s)	463, 1117
Cfr10I	RCCGGY	1 cut(s)	1027
Cfr13I	GGNCC	4 cut(s)	486, 871, 1559, 1754
CseI	GACGC	1 cut(s)	1123
Csp6I	GTAC	6 cut(s)	7, 294, 512, 1477, 1603, 1625
CviQI	GTAC	6 cut(s)	7, 294, 512, 1477, 1603, 1625
DdeI	CTNAG	4 cut(s)	54, 119, 1235, 1555
DpnI	GATC	8 cut(s)	46, 369, 1381, 1421, 1439, 1739, 1806, 1920
DpnII	GATC	8 cut(s)	44, 367, 1379, 1419, 1437, 1737, 1804, 1918
DraIII	CACNNNGTG	1 cut(s)	655
DriI	GACNNNNNGTC	1 cut(s)	1646
EaeI	YGGCCR	1 cut(s)	1025
Eam1104I	CTCTTC	3 cut(s)	183, 248, 886
Eam1105I	GACNNNNNGTC	1 cut(s)	1646
EarI	CTCTTC	3 cut(s)	183, 248, 886
Eco130I	CCWWGG	1 cut(s)	1929
Eco31I	GGTCTC	2 cut(s)	108, 1537
Eco47I	GGWCC	1 cut(s)	486
Eco47III	AGCGCT	1 cut(s)	462
Eco57I	CTGAAG	2 cut(s)	617, 1911
EcoO109I	RGGNCCY	2 cut(s)	486, 1559
EcoRII	CCWGG	1 cut(s)	1068
EcoT14I	CCWWGG	1 cut(s)	1929
EcoT22I	ATGCAT	1 cut(s)	1264
ErhI	CCWWGG	1 cut(s)	1929
FalI	AAGNNNNNCTT	4 cut(s)	137, 169, 887, 919
FaqI	GGGAC	2 cut(s)	499, 1507
FauI	CCCGC	1 cut(s)	1669
FauNDI	CATATG	1 cut(s)	1264
FbaI	TGATCA	1 cut(s)	1737
Fnu4HI	GCNGC	2 cut(s)	417, 954
FokI	GGATG	6 cut(s)	819, 968, 1210, 1446, 1922, 2053
Fsp4HI	GCNGC	2 cut(s)	417, 954
FspBI	CTAG	3 cut(s)	1044, 1563, 2168
GlaI	GCGC	2 cut(s)	462, 1116
GluI	GCNGC	2 cut(s)	417, 954
GsuI	CTGGAG	2 cut(s)	747, 2037
HaeII	RGCGCY	1 cut(s)	464
HaeIII	GGCC	4 cut(s)	873, 1027, 1561, 1755
HapII	CCGG	6 cut(s)	159, 1028, 1442, 1587, 1777, 1907
HgaI	GACGC	1 cut(s)	1123
HhaI	GCGC	2 cut(s)	463, 1117
Hin6I	GCGC	2 cut(s)	461, 1115
HinP1I	GCGC	2 cut(s)	461, 1115
HindIII	AAGCTT	1 cut(s)	557
HinfI	GANTC	6 cut(s)	102, 169, 736, 1913, 1985, 2012
HpaII	CCGG	6 cut(s)	159, 1028, 1442, 1587, 1777, 1907
HphI	GGTGA	4 cut(s)	296, 515, 959, 1627
Hpy166II	GTNNAC	8 cut(s)	142, 512, 567, 769, 1479, 1603, 1605, 2185
Hpy188I	TCNGA	5 cut(s)	376, 423, 1640, 1918, 1923
Hpy8I	GTNNAC	8 cut(s)	142, 512, 567, 769, 1479, 1603, 1605, 2185
HpyCH4III	ACNGT	6 cut(s)	73, 413, 1285, 1371, 1823, 1880
HpyCH4IV	ACGT	1 cut(s)	1969
HpyF10VI	GCNNNNNNNGC	6 cut(s)	619, 705, 860, 1049, 1131, 1901
HpyF3I	CTNAG	4 cut(s)	54, 119, 1235, 1555
HpySE526I	ACGT	1 cut(s)	1969
HspAI	GCGC	2 cut(s)	461, 1115
Kpn2I	TCCGGA	2 cut(s)	158, 1586
KpnI	GGTACC	2 cut(s)	297, 1628
Ksp22I	TGATCA	1 cut(s)	1737
Kzo9I	GATC	8 cut(s)	44, 367, 1379, 1419, 1437, 1737, 1804, 1918
LmnI	GCTCC	1 cut(s)	676
Lsp1109I	GCAGC	2 cut(s)	428, 940
LweI	GCATC	5 cut(s)	646, 1061, 1415, 1876, 2075
MaeI	CTAG	3 cut(s)	1044, 1563, 2168
MaeII	ACGT	1 cut(s)	1969
MalI	GATC	8 cut(s)	46, 369, 1381, 1421, 1439, 1739, 1806, 1920
MboI	GATC	8 cut(s)	44, 367, 1379, 1419, 1437, 1737, 1804, 1918
MfeI	CAATTG	4 cut(s)	498, 1192, 1227, 1383
MflI	RGATCY	4 cut(s)	367, 1419, 1437, 1804
MhlI	GDGCHC	1 cut(s)	78
MluI	ACGCGT	1 cut(s)	1132
MlyI	GAGTC	3 cut(s)	111, 178, 1994
Mph1103I	ATGCAT	1 cut(s)	1264
MroI	TCCGGA	2 cut(s)	158, 1586
MroXI	GAANNNNTTC	1 cut(s)	428
MseI	TTAA	5 cut(s)	335, 561, 1202, 1539, 2194
MslI	CAYNNNNRTG	5 cut(s)	263, 1263, 1286, 1719, 2043
MspA1I	CMGCKG	1 cut(s)	1631
MspCI	CTTAAG	1 cut(s)	560
MspI	CCGG	6 cut(s)	159, 1028, 1442, 1587, 1777, 1907
MspR9I	CCNGG	3 cut(s)	1070, 1442, 1907
MunI	CAATTG	4 cut(s)	498, 1192, 1227, 1383
Mva1269I	GAATGC	3 cut(s)	339, 1664, 2038
MvaI	CCWGG	1 cut(s)	1070
MvnI	CGCG	1 cut(s)	1134
MwoI	GCNNNNNNNGC	6 cut(s)	619, 705, 860, 1049, 1131, 1901
NciI	CCSGG	2 cut(s)	1442, 1907
NcoI	CCATGG	1 cut(s)	1929
NdeI	CATATG	1 cut(s)	1264
NdeII	GATC	8 cut(s)	44, 367, 1379, 1419, 1437, 1737, 1804, 1918
NlaIV	GGNNCC	5 cut(s)	17, 295, 487, 1439, 1626
NsiI	ATGCAT	1 cut(s)	1264
NspI	RCATGY	4 cut(s)	775, 912, 1774, 2048
PagI	TCATGA	1 cut(s)	175
PciI	ACATGT	2 cut(s)	771, 908
PctI	GAATGC	3 cut(s)	339, 1664, 2038
PdmI	GAANNNNTTC	1 cut(s)	428
PfeI	GAWTC	3 cut(s)	736, 1913, 2012
PkrI	GCNGC	2 cut(s)	418, 955
PleI	GAGTC	3 cut(s)	110, 177, 1993
PpsI	GAGTC	3 cut(s)	110, 177, 1993
Ppu21I	YACGTR	1 cut(s)	1970
PpuMI	RGGWCCY	1 cut(s)	486
PscI	ACATGT	2 cut(s)	771, 908
PsiI	TTATAA	1 cut(s)	1100
Psp5II	RGGWCCY	1 cut(s)	486
Psp6I	CCWGG	1 cut(s)	1068
PspGI	CCWGG	1 cut(s)	1068
PspN4I	GGNNCC	5 cut(s)	17, 295, 487, 1439, 1626
PspPI	GGNCC	4 cut(s)	486, 871, 1559, 1754
PspPPI	RGGWCCY	1 cut(s)	486
PstI	CTGCAG	1 cut(s)	1995
PstNI	CAGNNNCTG	2 cut(s)	1016, 1409
PsuI	RGATCY	4 cut(s)	367, 1419, 1437, 1804
PvuII	CAGCTG	1 cut(s)	1631
RsaI	GTAC	6 cut(s)	8, 295, 513, 1478, 1604, 1626
RsaNI	GTAC	6 cut(s)	7, 294, 512, 1477, 1603, 1625
RseI	CAYNNNNRTG	5 cut(s)	263, 1263, 1286, 1719, 2043
SaqAI	TTAA	5 cut(s)	335, 561, 1202, 1539, 2194
SatI	GCNGC	2 cut(s)	417, 954
Sau3AI	GATC	8 cut(s)	44, 367, 1379, 1419, 1437, 1737, 1804, 1918
Sau96I	GGNCC	4 cut(s)	486, 871, 1559, 1754
SchI	GAGTC	3 cut(s)	111, 178, 1994
ScrFI	CCNGG	3 cut(s)	1070, 1442, 1907
SduI	GDGCHC	1 cut(s)	78
SfaNI	GCATC	5 cut(s)	646, 1061, 1415, 1876, 2075
SfcI	CTRYAG	2 cut(s)	1991, 2088
SinI	GGWCC	1 cut(s)	486
SmiMI	CAYNNNNRTG	5 cut(s)	263, 1263, 1286, 1719, 2043
SmlI	CTYRAG	1 cut(s)	560
SmoI	CTYRAG	1 cut(s)	560
SsiI	CCGC	1 cut(s)	1662
SspMI	CTAG	3 cut(s)	1044, 1563, 2168
StyD4I	CCNGG	3 cut(s)	1068, 1440, 1905
StyI	CCWWGG	1 cut(s)	1929
TaaI	ACNGT	6 cut(s)	73, 413, 1285, 1371, 1823, 1880
TaiI	ACGT	1 cut(s)	1972
TaqI	TCGA	4 cut(s)	435, 890, 1154, 1830
TatI	WGTACW	3 cut(s)	511, 1476, 1602
TfiI	GAWTC	3 cut(s)	736, 1913, 2012
Tru1I	TTAA	5 cut(s)	335, 561, 1202, 1539, 2194
Tru9I	TTAA	5 cut(s)	335, 561, 1202, 1539, 2194
TscAI	CASTG	7 cut(s)	418, 549, 737, 1112, 1281, 1288, 1995
TseI	GCWGC	2 cut(s)	416, 953
TspGWI	ACGGA	2 cut(s)	657, 1690
TspRI	CASTG	7 cut(s)	418, 549, 737, 1112, 1281, 1288, 1995
Vha464I	CTTAAG	1 cut(s)	560
VpaK11BI	GGWCC	1 cut(s)	486
XceI	RCATGY	4 cut(s)	775, 912, 1774, 2048
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1191
XmnI	GAANNNNTTC	1 cut(s)	428
XspI	CTAG	3 cut(s)	1044, 1563, 2168
Zsp2I	ATGCAT	1 cut(s)	1264

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.