Rmu_sc0007961.1_g000020

Potassium transporter

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0007961.1
OG0014564
Physical Location & Seq
Reverse (-)
75757 .. 81396
5640 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0007961.1_g000020.1.cds

Sequence Viewer

Length: 2787 bp
atgaacccttctgaagaactagtggaacaaggaatttctccaaggaacttgcagagggtatcttgtgcaactgtgctcacattggcttatcaaagtctgggagtcgtttatggagacctcagcatatcccctctatatgtttacaagaccaccttctccggaaagttgagtcttcatgaggacgatgaagagattttcggggtgctttcatttattttatggacatttactctcattgctctcttcaagtatgttttcattgtgatgttggctgatgacaatggtgaaggtggtacctttgccttatactccctcctctgtcgtcacgcaagattaagcattctacatcaagaaatcacagatgaggatctgtctgaatatgtgacagagggaaacaaagatacatggcatagtgcagctctgaaatcattcttcgacaagcacccaagatttcaaaaagcgctactgatttttgttctgtttgggacctgtatggcaattggtgatggtgtactcactccttcaatatcagttctttcagcagtgtcaggggtaaagcttaagttcacagaactccatgacaattatgttgttatcatctcatgtgtcttgctggtggggcttttctcccttcagcatcacggaacacacagagtggctttcatgtttgctccaatcattactgcatggcttctgtgcattagtggcattggaatatacaacatagttcagtggaatcaatgcatatttcaagcactctctccagtttacatgttgaagttccttcaaacgacaggcattgaaggatggctatcgttagctggtgttgttctttcaataacaggtgtagaggcaatgtttgctaatttgggccatttctcttcactctcgataaagatagccttcacatgtttagtatatccctctcttgttctttcctacatgggtgaggctgcatttctttccaagcaccatgaagacatccaaagaagtttctacaaatccataccagaagctgtgttttggccggtgttcatactcgctagttttgcatctgtggtaggaagccaggcagtaatttcagctaccttctccattataagccagtgttctgcgctgaattgctttccacgcgtcaagatagttcatacttcgagtaaaatatacgggcaaatatacattccagaagtcaattggatgttaatgtgcctttgtttagctgtgacaattggattgagggatactaatatgatgggtcatgcatatgggttggcagtgaccactgtaatgtttgtgacaacttgcttgatggctctggtgatgataattgtctggaaagaaagggtagttagtgcattagcatttttactgttctttggatcaattgagttgatttatatttcatcatctgtcacgaagatccccgaaggtggatggatcccggttctgctgtctcttgtctttgtggctataatgtacacttggaactacgggacaatgatgaaacaccaatttgatgttgagaacaaggtctcaattaaccgaatagtgtgcttagggcctagtctgggcatggttcgtgtctccggaattggacttgtgtacactaatttggtgactggggtaccagctgttttcggacactttgtcactaatctacctgcattccataaggtgctgatttttgtttgtgtcaaatcagttcaagttccccatgttagtggaaaggaaaggttgatcattagtagggttggcccgaaggagtgtggcatgttccggtgcattgtgaggtatggttacaaggatcttcaacaggaaaactgtaatttcgagaataagttggtgtctggtatagtgcagtttgtagaaacagaagactgtcctgatgctgaagccttttatgccccggatgatccggatcagacttccgtggagttgaagaatgaagaaaacacgatacaagtttcacgtaatcttcaagatgagtcactgcagatattagaagccaaagaatctggagtgacttatattcttgggcattcacatgcaaaggcgaagaaatcagcatcctttatcaagaaagttgctatagatattgtgtataattttctgtgcaagaattgtagagagcctgatgttgtgttgaatgtgcctcctacttctttgctagaagtaggccatcccaccacaacaatcatcatgactaacggtagcgggggaaacgctgaggagcaggcggatcaatctgccaatccccatcccaccaaccccgggtctaacgataacctaacggttaacgttaaccgagcactattcaacactccgactgcagcggaggcacgaccaagcaacagtcacccaccaggacaggatctcgcctctatgtatgagctggcattggcggacctccacaaggctaatagagagcgtgaacaagagcacaaagagaaggccgaggcccaaaagcaggtggtcacgctgatgtcaaaattcgacgagctgaaaaaggcgctagaggcaaatgctaacccagcacatagcgagcaatctcggagcaccagacgtagtcgacccattacaggcgaaatggtacccgtaccaatcatacaaatgcaggtaccgccgaacccaccagaactattgggaatgggcccacctcccttaccccgcctaatgatggaacaggaagcagagtcacagcctcacatcaaccgctcagccgctagggctaggactgagggaaatccacctgtccccaggtgggagctggttcagcggaatctctag

Protein Analysis

928

Amino Acids

102.75

Weight (kDa)

6.15

Isoelectric Point (pI)

37.3

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0014564)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G30070 AT2G30070
fragaria_vesca FvH4_3g39040
malus_domestica MD11G1069200.v1.1
prunus_persica Prupe.6G054100_v2.0.a1 Prupe.6G054100_v2.0.a1
pyrus_communis pycom11g05770
rosa_chinensis RchiOBHm_Chr5g0070351
rosa_laevigata RLG00000036127
rosa_multiflora Rmu_sc0007961.1_g000020
rosa_roxburghii Rroxscaffold_1G00010830
rosa_rugosa Rorug05G0405200
rosa_samantha Rh5AG460800 Rh5BG479100 Rh5CG503300 Rh5DG491000
rosa_wichuraiana Rw5G042950

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1100
AarI CACCTGC 1 cut(s) 2458
Acc36I ACCTGC 3 cut(s) 1669, 2458, 2605
Acc65I GGTACC 4 cut(s) 293, 1624, 2590, 2617
AccB1I GGYRCC 4 cut(s) 293, 1624, 2590, 2617
AccBSI CCGCTC 1 cut(s) 2715
AccI GTMKAC 1 cut(s) 2569
AccII CGCG 1 cut(s) 1134
AccIII TCCGGA 3 cut(s) 158, 1586, 1915
AciI CCGC 9 cut(s) 2214, 2237, 2333, 2402, 2621, 2668, 2713, 2721, 2776
AclI AACGTT 1 cut(s) 2298
AcoI YGGCCR 1 cut(s) 1025
AcsI RAATTY 2 cut(s) 33, 2489
AcuI CTGAAG 3 cut(s) 33, 617, 1911
AdeI CACNNNGTG 1 cut(s) 655
AfaI GTAC 8 cut(s) 295, 513, 1478, 1604, 1626, 2592, 2598, 2619
AfeI AGCGCT 1 cut(s) 462
AfiI CCNNNNNNNGG 8 cut(s) 1430, 1568, 2271, 2413, 2467, 2579, 2677, 2761
AflII CTTAAG 1 cut(s) 560
AflIII ACRYGT 3 cut(s) 771, 908, 1132
AhdI GACNNNNNGTC 1 cut(s) 1646
AhlI ACTAGT 1 cut(s) 19
AjnI CCWGG 3 cut(s) 1068, 2362, 2756
Alw21I GWGCWC 4 cut(s) 78, 2311, 2442, 2558
Alw26I GTCTC 4 cut(s) 108, 1458, 1537, 1588
AlwNI CAGNNNCTG 1 cut(s) 1016
Ama87I CYCGRG 1 cut(s) 2270
Aor13HI TCCGGA 3 cut(s) 158, 1586, 1915
Aor51HI AGCGCT 1 cut(s) 462
AoxI GGCC 8 cut(s) 871, 1025, 1559, 1753, 2176, 2451, 2457, 2650
ApaI GGGCCC 1 cut(s) 2654
ApeKI GCWGC 3 cut(s) 416, 953, 2330
ApoI RAATTY 2 cut(s) 33, 2489
Asp700I GAANNNNTTC 1 cut(s) 428
Asp718I GGTACC 4 cut(s) 293, 1624, 2590, 2617
AspLEI GCGC 3 cut(s) 463, 1117, 2512
AspS9I GGNCC 8 cut(s) 486, 871, 1559, 1754, 2404, 2458, 2650, 2651
AsuC2I CCSGG 4 cut(s) 1442, 1907, 2271, 2272
AsuHPI GGTGA 6 cut(s) 296, 515, 959, 1330, 1627, 2348
AvaI CYCGRG 1 cut(s) 2270
AvaII GGWCC 2 cut(s) 486, 2404
BaeGI GKGCMC 1 cut(s) 2654
BaeI ACNNNNGTAYC 2 cut(s) 1608, 1641
BamHI GGATCC 1 cut(s) 1437
BanI GGYRCC 4 cut(s) 293, 1624, 2590, 2617
BanII GRGCYC 1 cut(s) 2654
BbsI GAAGAC 3 cut(s) 164, 984, 1881
Bbv12I GWGCWC 4 cut(s) 78, 2311, 2442, 2558
BbvCI CCTCAGC 2 cut(s) 119, 2226
BbvI GCAGC 3 cut(s) 428, 940, 2342
BccI CCATC 8 cut(s) 500, 801, 1246, 1303, 1428, 2187, 2265, 2671
BcgI CGANNNNNNTGC 2 cut(s) 1533, 1567
BciT130I CCWGG 3 cut(s) 1070, 2364, 2758
BciVI GTATCC 1 cut(s) 1234
BclI TGATCA 1 cut(s) 1737
BcnI CCSGG 4 cut(s) 1442, 1907, 2271, 2272
BcoDI GTCTC 4 cut(s) 108, 1458, 1537, 1588
BcuI ACTAGT 1 cut(s) 19
BfaI CTAG 8 cut(s) 20, 1044, 1563, 2168, 2513, 2724, 2730, 2785
BfmI CTRYAG 3 cut(s) 1991, 2088, 2328
BfoI RGCGCY 2 cut(s) 464, 2513
BfrI CTTAAG 1 cut(s) 560
BfuAI ACCTGC 3 cut(s) 1669, 2458, 2605
BfuI GTATCC 1 cut(s) 1234
BglI GCCNNNNNGGC 1 cut(s) 2726
BisI GCNGC 4 cut(s) 417, 954, 2331, 2721
BlpI GCTNAGC 1 cut(s) 2716
BlsI GCNGC 4 cut(s) 418, 955, 2332, 2722
Bme1390I CCNGG 7 cut(s) 1070, 1442, 1907, 2271, 2272, 2364, 2758
Bme18I GGWCC 2 cut(s) 486, 2404
BmeRI GACNNNNNGTC 1 cut(s) 1646
BmeT110I CYCGRG 1 cut(s) 2270
BmgT120I GGNCC 8 cut(s) 486, 871, 1559, 1754, 2404, 2458, 2650, 2651
BmiI GGNNCC 7 cut(s) 295, 487, 1439, 1626, 2592, 2619, 2652
BmrFI CCNGG 7 cut(s) 1070, 1442, 1907, 2271, 2272, 2364, 2758
BmrI ACTGGG 1 cut(s) 1629
BmsI GCATC 4 cut(s) 646, 1061, 1876, 2075
BmuI ACTGGG 1 cut(s) 1629
BpiI GAAGAC 3 cut(s) 164, 984, 1881
BpmI CTGGAG 2 cut(s) 747, 2037
Bpu10I CCTNAGC 3 cut(s) 119, 1555, 2226
Bpu1102I GCTNAGC 1 cut(s) 2716
BpuMI CCSGG 4 cut(s) 1442, 1907, 2271, 2272
BsaAI YACGTR 1 cut(s) 1970
BsaBI GATNNNNATC 3 cut(s) 366, 811, 1917
BsaI GGTCTC 2 cut(s) 108, 1537
BsaJI CCNNGG 7 cut(s) 41, 1905, 1929, 2269, 2270, 2454, 2756
BsaWI WCCGGW 4 cut(s) 158, 1586, 1776, 1915
Bsc4I CCNNNNNNNGG 8 cut(s) 1430, 1568, 2271, 2413, 2467, 2579, 2677, 2761
Bse118I RCCGGY 1 cut(s) 1027
Bse1I ACTGG 3 cut(s) 764, 1105, 1624
Bse3DI GCAATG 2 cut(s) 234, 861
Bse8I GATNNNNATC 3 cut(s) 366, 811, 1917
BseAI TCCGGA 3 cut(s) 158, 1586, 1915
BseBI CCWGG 3 cut(s) 1070, 2364, 2758
BseDI CCNNGG 7 cut(s) 41, 1905, 1929, 2269, 2270, 2454, 2756
BseGI GGATG 8 cut(s) 812, 981, 1203, 1439, 1915, 2066, 2179, 2257
BseJI GATNNNNATC 3 cut(s) 366, 811, 1917
BseLI CCNNNNNNNGG 8 cut(s) 1430, 1568, 2271, 2413, 2467, 2579, 2677, 2761
BseMI GCAATG 2 cut(s) 234, 861
BseMII CTCAG 4 cut(s) 133, 2217, 2727, 2730
BseNI ACTGG 3 cut(s) 764, 1105, 1624
BseRI GAGGAG 2 cut(s) 305, 2243
BseSI GKGCMC 1 cut(s) 2654
BseXI GCAGC 3 cut(s) 428, 940, 2342
BseYI CCCAGC 1 cut(s) 2530
BsgI GTGCAG 2 cut(s) 435, 1877
Bsh1236I CGCG 1 cut(s) 1134
BshFI GGCC 8 cut(s) 873, 1027, 1561, 1755, 2178, 2453, 2459, 2652
BshNI GGYRCC 4 cut(s) 293, 1624, 2590, 2617
BsiHKAI GWGCWC 4 cut(s) 78, 2311, 2442, 2558
BsiHKCI CYCGRG 1 cut(s) 2270
BsiSI CCGG 8 cut(s) 159, 1028, 1442, 1587, 1777, 1907, 1916, 2271
BslFI GGGAC 3 cut(s) 499, 1507, 2738
BslI CCNNNNNNNGG 8 cut(s) 1430, 1568, 2271, 2413, 2467, 2579, 2677, 2761
BsmAI GTCTC 4 cut(s) 108, 1458, 1537, 1588
BsmFI GGGAC 3 cut(s) 499, 1507, 2738
BsmI GAATGC 3 cut(s) 339, 1664, 2038
BsnI GGCC 8 cut(s) 873, 1027, 1561, 1755, 2178, 2453, 2459, 2652
Bso31I GGTCTC 2 cut(s) 108, 1537
BsoBI CYCGRG 1 cut(s) 2270
Bsp120I GGGCCC 1 cut(s) 2650
Bsp1286I GDGCHC 5 cut(s) 78, 2311, 2442, 2558, 2654
Bsp13I TCCGGA 3 cut(s) 158, 1586, 1915
Bsp1407I TGTACA 2 cut(s) 1476, 1602
Bsp1720I GCTNAGC 1 cut(s) 2716
BspACI CCGC 9 cut(s) 2214, 2237, 2333, 2402, 2621, 2668, 2713, 2721, 2776
BspANI GGCC 8 cut(s) 873, 1027, 1561, 1755, 2178, 2453, 2459, 2652
BspCNI CTCAG 4 cut(s) 132, 2218, 2728, 2729
BspEI TCCGGA 3 cut(s) 158, 1586, 1915
BspFNI CGCG 1 cut(s) 1134
BspHI TCATGA 2 cut(s) 175, 2199
BspLI GGNNCC 7 cut(s) 295, 487, 1439, 1626, 2592, 2619, 2652
BspMAI CTGCAG 2 cut(s) 1995, 2332
BspMI ACCTGC 3 cut(s) 1669, 2458, 2605
BspT107I GGYRCC 4 cut(s) 293, 1624, 2590, 2617
BspTI CTTAAG 1 cut(s) 560
BspTNI GGTCTC 2 cut(s) 108, 1537
BsrBI CCGCTC 1 cut(s) 2715
BsrDI GCAATG 2 cut(s) 234, 861
BsrFI RCCGGY 1 cut(s) 1027
BsrGI TGTACA 2 cut(s) 1476, 1602
BsrI ACTGG 3 cut(s) 764, 1105, 1624
BssAI RCCGGY 1 cut(s) 1027
BssECI CCNNGG 7 cut(s) 41, 1905, 1929, 2269, 2270, 2454, 2756
BssT1I CCWWGG 1 cut(s) 41
Bst2UI CCWGG 3 cut(s) 1070, 2364, 2758
Bst4CI ACNGT 8 cut(s) 73, 1285, 1371, 1823, 1880, 2210, 2293, 2354
Bst6I CTCTTC 3 cut(s) 183, 248, 886
BstAFI CTTAAG 1 cut(s) 560
BstAPI GCANNNNNTGC 1 cut(s) 860
BstAUI TGTACA 2 cut(s) 1476, 1602
BstBAI YACGTR 1 cut(s) 1970
BstC8I GCNNGC 3 cut(s) 2235, 2394, 2543
BstDEI CTNAG 5 cut(s) 119, 1555, 2226, 2716, 2736
BstDSI CCRYGG 1 cut(s) 1929
BstENI CCTNNNNNAGG 1 cut(s) 2411
BstF5I GGATG 8 cut(s) 812, 981, 1203, 1439, 1915, 2066, 2179, 2257
BstFNI CGCG 1 cut(s) 1134
BstH2I RGCGCY 2 cut(s) 464, 2513
BstHHI GCGC 3 cut(s) 463, 1117, 2512
BstMAI GTCTC 4 cut(s) 108, 1458, 1537, 1588
BstNI CCWGG 3 cut(s) 1070, 2364, 2758
BstNSI RCATGY 4 cut(s) 775, 912, 1774, 2048
BstSCI CCNGG 7 cut(s) 1068, 1440, 1905, 2269, 2270, 2362, 2756
BstSFI CTRYAG 3 cut(s) 1991, 2088, 2328
BstSLI GKGCMC 1 cut(s) 2654
BstUI CGCG 1 cut(s) 1134
BstV1I GCAGC 3 cut(s) 428, 940, 2342
BstV2I GAAGAC 3 cut(s) 164, 984, 1881
BstX2I RGATCY 5 cut(s) 367, 1419, 1437, 1804, 2371
BstXI CCANNNNNNTGG 1 cut(s) 1721
BstYI RGATCY 5 cut(s) 367, 1419, 1437, 1804, 2371
BsuI GTATCC 1 cut(s) 1234
BsuRI GGCC 8 cut(s) 873, 1027, 1561, 1755, 2178, 2453, 2459, 2652
BtgI CCRYGG 1 cut(s) 1929
BtsCI GGATG 8 cut(s) 812, 981, 1203, 1439, 1915, 2066, 2179, 2257
BtsI GCAGTG 3 cut(s) 549, 1281, 1988
BtsIMutI CAGTG 6 cut(s) 549, 737, 1112, 1281, 1281, 1988
BveI ACCTGC 3 cut(s) 1669, 2458, 2605
Cac8I GCNNGC 3 cut(s) 2235, 2394, 2543
CaiI CAGNNNCTG 1 cut(s) 1016
CciI TCATGA 2 cut(s) 175, 2199
CfoI GCGC 3 cut(s) 463, 1117, 2512
Cfr10I RCCGGY 1 cut(s) 1027
Cfr13I GGNCC 8 cut(s) 486, 871, 1559, 1754, 2404, 2458, 2650, 2651
Cfr9I CCCGGG 1 cut(s) 2270
CseI GACGC 1 cut(s) 1123
Csp6I GTAC 8 cut(s) 294, 512, 1477, 1603, 1625, 2591, 2597, 2618
CviQI GTAC 8 cut(s) 294, 512, 1477, 1603, 1625, 2591, 2597, 2618
DdeI CTNAG 5 cut(s) 119, 1555, 2226, 2716, 2736
DraIII CACNNNGTG 1 cut(s) 655
DriI GACNNNNNGTC 1 cut(s) 1646
EaeI YGGCCR 1 cut(s) 1025
Eam1104I CTCTTC 3 cut(s) 183, 248, 886
Eam1105I GACNNNNNGTC 1 cut(s) 1646
EarI CTCTTC 3 cut(s) 183, 248, 886
EciI GGCGGA 2 cut(s) 2252, 2417
Eco130I CCWWGG 1 cut(s) 41
Eco24I GRGCYC 1 cut(s) 2654
Eco31I GGTCTC 2 cut(s) 108, 1537
Eco47I GGWCC 2 cut(s) 486, 2404
Eco47III AGCGCT 1 cut(s) 462
Eco57I CTGAAG 3 cut(s) 33, 617, 1911
Eco88I CYCGRG 1 cut(s) 2270
EcoNI CCTNNNNNAGG 1 cut(s) 2411
EcoO109I RGGNCCY 2 cut(s) 486, 1559
EcoRII CCWGG 3 cut(s) 1068, 2362, 2756
EcoT14I CCWWGG 1 cut(s) 41
EcoT22I ATGCAT 2 cut(s) 746, 1264
EcoT38I GRGCYC 1 cut(s) 2654
ErhI CCWWGG 1 cut(s) 41
FalI AAGNNNNNCTT 4 cut(s) 137, 169, 887, 919
FaqI GGGAC 3 cut(s) 499, 1507, 2738
FauI CCCGC 2 cut(s) 2207, 2675
FauNDI CATATG 1 cut(s) 1264
FbaI TGATCA 1 cut(s) 1737
FblI GTMKAC 1 cut(s) 2569
Fnu4HI GCNGC 4 cut(s) 417, 954, 2331, 2721
FokI GGATG 8 cut(s) 819, 968, 1210, 1446, 1922, 2053, 2166, 2244
FriOI GRGCYC 1 cut(s) 2654
Fsp4HI GCNGC 4 cut(s) 417, 954, 2331, 2721
FspBI CTAG 8 cut(s) 20, 1044, 1563, 2168, 2513, 2724, 2730, 2785
GlaI GCGC 3 cut(s) 462, 1116, 2511
GluI GCNGC 4 cut(s) 417, 954, 2331, 2721
GsaI CCCAGC 1 cut(s) 2534
GsuI CTGGAG 2 cut(s) 747, 2037
HaeII RGCGCY 2 cut(s) 464, 2513
HaeIII GGCC 8 cut(s) 873, 1027, 1561, 1755, 2178, 2453, 2459, 2652
HapII CCGG 8 cut(s) 159, 1028, 1442, 1587, 1777, 1907, 1916, 2271
HgaI GACGC 1 cut(s) 1123
HhaI GCGC 3 cut(s) 463, 1117, 2512
Hin6I GCGC 3 cut(s) 461, 1115, 2510
HinP1I GCGC 3 cut(s) 461, 1115, 2510
HincII GTYRAC 3 cut(s) 2296, 2302, 2570
HindII GTYRAC 3 cut(s) 2296, 2302, 2570
HindIII AAGCTT 1 cut(s) 557
HinfI GANTC 7 cut(s) 102, 169, 736, 1985, 2012, 2693, 2779
HpaI GTTAAC 2 cut(s) 2296, 2302
HpaII CCGG 8 cut(s) 159, 1028, 1442, 1587, 1777, 1907, 1916, 2271
HphI GGTGA 6 cut(s) 296, 515, 959, 1330, 1627, 2348
Hpy188I TCNGA 7 cut(s) 13, 376, 423, 1640, 1923, 2325, 2553
Hpy99I CGWCG 1 cut(s) 2498
HpyCH4III ACNGT 8 cut(s) 73, 1285, 1371, 1823, 1880, 2210, 2293, 2354
HpyCH4IV ACGT 3 cut(s) 1969, 2298, 2563
HpyF3I CTNAG 5 cut(s) 119, 1555, 2226, 2716, 2736
HpySE526I ACGT 3 cut(s) 1969, 2298, 2563
HspAI GCGC 3 cut(s) 461, 1115, 2510
Kpn2I TCCGGA 3 cut(s) 158, 1586, 1915
KpnI GGTACC 4 cut(s) 297, 1628, 2594, 2621
Ksp22I TGATCA 1 cut(s) 1737
KspAI GTTAAC 2 cut(s) 2296, 2302
LmnI GCTCC 4 cut(s) 676, 2230, 2553, 2764
Lsp1109I GCAGC 3 cut(s) 428, 940, 2342
LweI GCATC 4 cut(s) 646, 1061, 1876, 2075
MaeI CTAG 8 cut(s) 20, 1044, 1563, 2168, 2513, 2724, 2730, 2785
MaeII ACGT 3 cut(s) 1969, 2298, 2563
MbiI CCGCTC 1 cut(s) 2715
MfeI CAATTG 4 cut(s) 498, 1192, 1227, 1383
MflI RGATCY 5 cut(s) 367, 1419, 1437, 1804, 2371
MhlI GDGCHC 5 cut(s) 78, 2311, 2442, 2558, 2654
MluI ACGCGT 1 cut(s) 1132
MlyI GAGTC 4 cut(s) 111, 178, 1994, 2702
MmeI TCCRAC 1 cut(s) 2348
Mph1103I ATGCAT 2 cut(s) 746, 1264
MroI TCCGGA 3 cut(s) 158, 1586, 1915
MroXI GAANNNNTTC 1 cut(s) 428
MseI TTAA 6 cut(s) 335, 561, 1202, 1539, 2295, 2301
MslI CAYNNNNRTG 7 cut(s) 263, 1263, 1286, 1719, 2043, 2480, 2609
MspA1I CMGCKG 3 cut(s) 1631, 2333, 2776
MspCI CTTAAG 1 cut(s) 560
MspI CCGG 8 cut(s) 159, 1028, 1442, 1587, 1777, 1907, 1916, 2271
MspR9I CCNGG 7 cut(s) 1070, 1442, 1907, 2271, 2272, 2364, 2758
MunI CAATTG 4 cut(s) 498, 1192, 1227, 1383
Mva1269I GAATGC 3 cut(s) 339, 1664, 2038
MvaI CCWGG 3 cut(s) 1070, 2364, 2758
MvnI CGCG 1 cut(s) 1134
NciI CCSGG 4 cut(s) 1442, 1907, 2271, 2272
NdeI CATATG 1 cut(s) 1264
NlaIV GGNNCC 7 cut(s) 295, 487, 1439, 1626, 2592, 2619, 2652
NmeAIII GCCGAG 1 cut(s) 2479
NsiI ATGCAT 2 cut(s) 746, 1264
NspI RCATGY 4 cut(s) 775, 912, 1774, 2048
PagI TCATGA 2 cut(s) 175, 2199
PaqCI CACCTGC 1 cut(s) 2458
PciI ACATGT 2 cut(s) 771, 908
PctI GAATGC 3 cut(s) 339, 1664, 2038
PdmI GAANNNNTTC 1 cut(s) 428
PfeI GAWTC 3 cut(s) 736, 2012, 2779
PflFI GACNNNGTC 1 cut(s) 2565
PkrI GCNGC 4 cut(s) 418, 955, 2332, 2722
PleI GAGTC 4 cut(s) 110, 177, 1993, 2701
PpsI GAGTC 4 cut(s) 110, 177, 1993, 2701
Ppu21I YACGTR 1 cut(s) 1970
PpuMI RGGWCCY 1 cut(s) 486
PscI ACATGT 2 cut(s) 771, 908
PsiI TTATAA 1 cut(s) 1100
Psp1406I AACGTT 1 cut(s) 2298
Psp5II RGGWCCY 1 cut(s) 486
Psp6I CCWGG 3 cut(s) 1068, 2362, 2756
PspFI CCCAGC 1 cut(s) 2530
PspGI CCWGG 3 cut(s) 1068, 2362, 2756
PspN4I GGNNCC 7 cut(s) 295, 487, 1439, 1626, 2592, 2619, 2652
PspOMI GGGCCC 1 cut(s) 2650
PspPI GGNCC 8 cut(s) 486, 871, 1559, 1754, 2404, 2458, 2650, 2651
PspPPI RGGWCCY 1 cut(s) 486
PstI CTGCAG 2 cut(s) 1995, 2332
PstNI CAGNNNCTG 1 cut(s) 1016
PsuI RGATCY 5 cut(s) 367, 1419, 1437, 1804, 2371
PsyI GACNNNGTC 1 cut(s) 2565
PvuII CAGCTG 1 cut(s) 1631
RsaI GTAC 8 cut(s) 295, 513, 1478, 1604, 1626, 2592, 2598, 2619
RsaNI GTAC 8 cut(s) 294, 512, 1477, 1603, 1625, 2591, 2597, 2618
RseI CAYNNNNRTG 7 cut(s) 263, 1263, 1286, 1719, 2043, 2480, 2609
SalI GTCGAC 1 cut(s) 2568
SaqAI TTAA 6 cut(s) 335, 561, 1202, 1539, 2295, 2301
SatI GCNGC 4 cut(s) 417, 954, 2331, 2721
Sau96I GGNCC 8 cut(s) 486, 871, 1559, 1754, 2404, 2458, 2650, 2651
SchI GAGTC 4 cut(s) 111, 178, 1994, 2702
ScrFI CCNGG 7 cut(s) 1070, 1442, 1907, 2271, 2272, 2364, 2758
SduI GDGCHC 5 cut(s) 78, 2311, 2442, 2558, 2654
SfaNI GCATC 4 cut(s) 646, 1061, 1876, 2075
SfcI CTRYAG 3 cut(s) 1991, 2088, 2328
SinI GGWCC 2 cut(s) 486, 2404
SmaI CCCGGG 1 cut(s) 2272
SmiMI CAYNNNNRTG 7 cut(s) 263, 1263, 1286, 1719, 2043, 2480, 2609
SmlI CTYRAG 1 cut(s) 560
SmoI CTYRAG 1 cut(s) 560
SpeI ACTAGT 1 cut(s) 19
SsiI CCGC 9 cut(s) 2214, 2237, 2333, 2402, 2621, 2668, 2713, 2721, 2776
SspMI CTAG 8 cut(s) 20, 1044, 1563, 2168, 2513, 2724, 2730, 2785
StyD4I CCNGG 7 cut(s) 1068, 1440, 1905, 2269, 2270, 2362, 2756
StyI CCWWGG 1 cut(s) 41
TaaI ACNGT 8 cut(s) 73, 1285, 1371, 1823, 1880, 2210, 2293, 2354
TaiI ACGT 3 cut(s) 1972, 2301, 2566
TaqI TCGA 6 cut(s) 435, 890, 1154, 1830, 2493, 2569
TatI WGTACW 3 cut(s) 511, 1476, 1602
TauI GCSGC 1 cut(s) 2723
TfiI GAWTC 3 cut(s) 736, 2012, 2779
Tru1I TTAA 6 cut(s) 335, 561, 1202, 1539, 2295, 2301
Tru9I TTAA 6 cut(s) 335, 561, 1202, 1539, 2295, 2301
TscAI CASTG 6 cut(s) 549, 737, 1112, 1281, 1288, 1995
TseI GCWGC 3 cut(s) 416, 953, 2330
TspGWI ACGGA 2 cut(s) 657, 1918
TspMI CCCGGG 1 cut(s) 2270
TspRI CASTG 6 cut(s) 549, 737, 1112, 1281, 1288, 1995
Tth111I GACNNNGTC 1 cut(s) 2565
Vha464I CTTAAG 1 cut(s) 560
VpaK11BI GGWCC 2 cut(s) 486, 2404
XagI CCTNNNNNAGG 1 cut(s) 2411
XapI RAATTY 2 cut(s) 33, 2489
XceI RCATGY 4 cut(s) 775, 912, 1774, 2048
XcmI CCANNNNNNNNNTGG 2 cut(s) 1191, 2764
XmaI CCCGGG 1 cut(s) 2270
XmiI GTMKAC 1 cut(s) 2569
XmnI GAANNNNTTC 1 cut(s) 428
XspI CTAG 8 cut(s) 20, 1044, 1563, 2168, 2513, 2724, 2730, 2785
Zsp2I ATGCAT 2 cut(s) 746, 1264
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.