Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr11

Orthogroup ID

OG0010178

Physical Location & Seq

Genomic Coordinates Forward (+)

9821952 .. 9827831

Gene Structure 5880 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD11G1111000.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2082 bp

ATGTCCACCCTCCGTCAACTCCAGACCTCCGCAAACCCAGAACCCCCACAAAACGGTGCCGTTGTGGCTGAGATCGGCGGCGACGTAGCTATGGAGGAAGACAGAGGCGCTCTGGTGCAGAGCCTGATCGACACGGTCAACGAAATAGCTTCGATCTCCGACTACAAGTGTACGGTCAAGAAGCAGTACTGCAATTTGGCGAGGAGGTTGAAGCTGCTGACCCCAATGTTCGAGGAGATTAGGGATAGCAAGGAGGTGGTTTCTCAGGAGACTTTGAAAGCCTTGCTTTCGTTCATGGAAGCTCTGAAATCGGCCAAGGAGCTGCTCAGATTCGGAAGCGAAAGCAGCAAGATTTACCTGGTTTTAGAAAGGGAGCAAATTATGATGAAGTTTCATGAGGTGACAGCTCGATTGGAGCAAGCTTTAAGTGGAATCTCCTATGAAAATCTTGACATATCAGATGAAGTTAAGGAACAGGTTGAGCTTGTTCTTGCTCAGTTTAGAAGAGCCAAAGGGAGGTTCGATTCGCCTGATGTTGAGCTCTATGGAGATCTCTTATCCCTTTACAGTAAAAATGAGGCAGCAACAGATCCAGCTGTCCTAAGAAGATTGGTTGATAAGTTAGAATTGACAGGTATAGCTGAACTCACACAAGAGTCACTAGCCTTGCATGAGATGGTTACTTTCAGTGGTGGGGATCCTGGGGAGAGCATCGAGAAGATGTCAATGCTACTGAAAAAAATTAAAGATTTTGTACAAACAGAAAACCCCGACATGGATGCTCCTGCAGGGGGAAAGAATATATTAGCAAGCTGCAGCGGGCAAGCATCCACCGACAAGAATCACAAAGTCCCCCCAGTTATACCAGATGATTTTCGGTGTCCAATATCTTTGGAGTTAATGAAGGACCCCGTCATTGTTTCAACAGGGCAGACATATGAGCGTTCCTGTATTGAGAAGTGGCTGGAAGCAGGGCATGCGACATGTCCAAAAACACAACAAAGCCTCTTTAACACCACCCTCACACCGAACTATGCTTTACGTAGCCTCATAGCCCAGTGGTGTGAGGCAAATGGCATTGAACCACCAAAAAGACCCAATTCTCGGCCTATTAAAACTACATCCTCCTGCTCTCCAGCAGAACGCACTAAGATTGAAATTCTCCTCCGCAAGCTGATGTCTGTTAGCCCCGAAGATCAAAGGTCTGCTGCGGGTGAAATCCGGCTTCTTGCCAAACGTAATGCAGACAATCGTGTGGCTATTGCTGAAGCTGGTGCAATACCCCTGCTTGTAGGCCTCCTTTCAACCCCCGACTCCCGTACCCAAGAGCATGCTGTCACTGCACTCCTCAACCTTTCCATATGTGAGGAGAACAAAGGAAGCATCATAACCTCTGGAGCAATTCCTGGTATTGTTCATGTCCTCAAGAATGGAGGCATGGAAGCACGGGAAAATGCAGCTGCGACCCTTTTTAGTCTTTCTGTCGTGGATGAAAATAAAGTCAGAATTGGTGCTTCGGGAGCCATTCCGCCACTTGTTACATTGCTGAGTGAAGGTACCCAAAGGGGGAAGAAAGATGCTGCAACTGCACTTTTTAACTTGTGCATTTATCAAGGTAACAAGGGGAAGGCAGTAAGGGCCGGTGTTGTTTCGACCCTAATGAAGCTGCTGACAGAACCTGGAGGTGGAATGGTGGATGAAGCACTGGCCATTCTAGCAATACTCTCTAGCCATGCTGAAGGGAAAGCAGCCATTGGAGCTGCTGAGGCAGTGCCTGTTTTGGTTGAAGTTATTGGGACAGGATCTCCCCGAAACAGAGAAAATGCAGCCGCGGTTTTGGTGCATCTTTGTTCTGGAGACCAACAACATATAGTAGAGGCTCAGGAACTTGGGGTGATGACTTCGTTATTGGAGTTGGCTCAAAATGGCACAGATAGAGGCAAGAGAAAGGCTGCACAGTTGCTTGAGCGAATGAATCGGTTTGCTGAGGCGCAGGCACAGGCACAGGCACAGGCACAACCTGATGATCAATCTGAGACCCAGTCACATCCACCCACCACTCCAAATGCCGTTGACGGATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0002682 GO:0002683 GO:0003674 GO:0003676 GO:0003723 GO:0003735 GO:0003824 GO:0004842 GO:0005102 GO:0005198 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005829 GO:0005840 GO:0006464 GO:0006807 GO:0006950 GO:0006952 GO:0008150 GO:0008152 GO:0009605 GO:0009607 GO:0009617 GO:0009987 GO:0010941 GO:0015934 GO:0016567 GO:0016740 GO:0019538 GO:0019787 GO:0019843 GO:0022625 GO:0022626 GO:0031347 GO:0031348 GO:0032446 GO:0032991 GO:0033612 GO:0036211 GO:0042742 GO:0042981 GO:0043066 GO:0043067 GO:0043069 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044391 GO:0044422 GO:0044424 GO:0044444 GO:0044445 GO:0044446 GO:0044464 GO:0048519 GO:0048523 GO:0048580 GO:0048583 GO:0048585 GO:0048586 GO:0050776 GO:0050777 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051239 GO:0051704 GO:0051707 GO:0060548 GO:0065007 GO:0070647 GO:0070696 GO:0071704 GO:0080134 GO:0097159 GO:0098542 GO:0140096 GO:1901363 GO:1901564 GO:1990904 GO:2000026 GO:2000028 GO:2000241

KEGG Pathways

Metabolic & Signaling

ko04010 ko04064 ko04620 ko04621 ko04624 ko04722 ko05133 ko05140 ko05142 ko05145 ko05152 ko05162 ko05164 map04010 map04064 map04620 map04621 map04624 map04722 map05133 map05140 map05142 map05145 map05152 map05162 map05164

Pfam Domains

Protein Families

Arm U-box

Protein Analysis

694

Amino Acids

74.84

Weight (kDa)

5.41

Isoelectric Point (pI)

41.52

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PUB2_N	PF25240	47 - 144	9.5e-07	PUB2-like, N-terminal domain
MLKL_N	PF22215	59 - 146	2.6e-07	Mixed lineage kinase domain-like N-terminal domain
PUB10_N	PF25368	60 - 171	2.5e-38	PUB10-like, N-terminal domain
U-box	PF04564	288 - 358	8.1e-22	U-box domain
ARM_PUB	PF25598	385 - 660	2.7e-28	Plant U-box protein ARM repeat region
ARM_ARMC5	PF24768	399 - 559	1.5e-09	ARMC5
Arm	PF00514	414 - 453	2.5e-10	Armadillo/beta-catenin-like repeat
ARM_ARMC5	PF24768	449 - 641	1.6e-10	ARMC5
Arm	PF00514	497 - 535	4e-07	Armadillo/beta-catenin-like repeat

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0010178)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G46510
fragaria_vesca	FvH4_3g35800 FvH4_3g35800 FvH4_3g35800
malus_domestica	MD03G1096300.v1.1 MD11G1111000.v1.1
prunus_persica	Prupe.6G079400_v2.0.a1 Prupe.6G079400_v2.0.a1 Prupe.6G079400_v2.0.a1
pyrus_communis	pycom03g07890 pycom11g09180
rosa_chinensis	RchiOBHm_Chr5g0063991
rosa_laevigata	RLG00000035696
rosa_multiflora	Rmu_sc0008881.1_g000007
rosa_roxburghii	Rroxscaffold_1G00016810
rosa_rugosa	Rorug05G0361600 Rorug05G0361700
rosa_samantha	Rh5BG435800 Rh5CG458900 Rh5DG449000
rosa_wichuraiana	Rw5G039470

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc65I	GGTACC	1 cut(s)	1556
AccB1I	GGYRCC	2 cut(s)	56, 1556
AccII	CGCG	1 cut(s)	1832
AciI	CCGC	8 cut(s)	30, 78, 819, 1168, 1211, 1529, 1830, 1832
AclWI	GGATC	4 cut(s)	584, 692, 705, 1810
AcoI	YGGCCR	2 cut(s)	312, 1707
AcsI	RAATTY	1 cut(s)	1158
AcuI	CTGAAG	2 cut(s)	1287, 1758
AfaI	GTAC	5 cut(s)	172, 188, 756, 1321, 1558
AfiI	CCNNNNNNNGG	7 cut(s)	53, 516, 775, 791, 1104, 1566, 1685
AflIII	ACRYGT	1 cut(s)	983
AgsI	TTSAA	7 cut(s)	211, 277, 924, 1082, 1157, 1305, 1787
AjnI	CCWGG	4 cut(s)	357, 700, 1405, 1678
AjuI	GAANNNNNNNTTGG	2 cut(s)	503, 535
Alw21I	GWGCWC	1 cut(s)	543
Alw26I	GTCTC	3 cut(s)	263, 1851, 2030
AlwI	GGATC	4 cut(s)	584, 692, 705, 1810
AlwNI	CAGNNNCTG	3 cut(s)	124, 1679, 1775
AoxI	GGCC	5 cut(s)	312, 1106, 1294, 1638, 1707
ApoI	RAATTY	1 cut(s)	1158
Asp718I	GGTACC	1 cut(s)	1556
AspLEI	GCGC	2 cut(s)	110, 1993
AspS9I	GGNCC	2 cut(s)	907, 1638
AsuHPI	GGTGA	3 cut(s)	412, 1226, 1906
AvaII	GGWCC	1 cut(s)	907
BaeI	ACNNNNGTAYC	2 cut(s)	1303, 1336
BalI	TGGCCA	1 cut(s)	1709
BamHI	GGATCC	1 cut(s)	697
BanI	GGYRCC	2 cut(s)	56, 1556
BanII	GRGCYC	1 cut(s)	543
BbsI	GAAGAC	1 cut(s)	105
Bbv12I	GWGCWC	1 cut(s)	543
BbvCI	CCTCAGC	2 cut(s)	1764, 1986
BccI	CCATC	1 cut(s)	670
BceAI	ACGGC	2 cut(s)	44, 2054
BcgI	CGANNNNNNTGC	2 cut(s)	761, 795
BciT130I	CCWGG	4 cut(s)	359, 702, 1407, 1680
BclI	TGATCA	1 cut(s)	2026
BcoDI	GTCTC	3 cut(s)	263, 1851, 2030
BfaI	CTAG	3 cut(s)	662, 1715, 1728
BfmI	CTRYAG	2 cut(s)	786, 814
BfoI	RGCGCY	1 cut(s)	111
BglI	GCCNNNNNGGC	1 cut(s)	65
BglII	AGATCT	1 cut(s)	550
BmcAI	AGTACT	1 cut(s)	188
Bme1390I	CCNGG	4 cut(s)	359, 702, 1407, 1680
Bme18I	GGWCC	1 cut(s)	907
BmgT120I	GGNCC	2 cut(s)	907, 1638
BmiI	GGNNCC	5 cut(s)	58, 699, 909, 1522, 1558
BmrFI	CCNGG	4 cut(s)	359, 702, 1407, 1680
BmrI	ACTGGG	3 cut(s)	851, 1051, 2035
BmsI	GCATC	6 cut(s)	720, 769, 836, 1392, 1567, 1852
BmuI	ACTGGG	3 cut(s)	851, 1051, 2035
BpiI	GAAGAC	1 cut(s)	105
BpmI	CTGGAG	5 cut(s)	5, 1119, 1416, 1701, 1875
Bpu10I	CCTNAGC	3 cut(s)	1764, 1881, 1986
BpuEI	CTTGAG	2 cut(s)	1409, 1985
BsaAI	YACGTR	1 cut(s)	1043
BsaI	GGTCTC	2 cut(s)	1851, 2030
BsaJI	CCNNGG	3 cut(s)	315, 701, 1830
BsaXI	ACNNNNNCTCC	2 cut(s)	1789, 1819
Bsc4I	CCNNNNNNNGG	7 cut(s)	53, 516, 775, 791, 1104, 1566, 1685
Bse118I	RCCGGY	1 cut(s)	1640
Bse1I	ACTGG	4 cut(s)	857, 1057, 1710, 2041
Bse3DI	GCAATG	1 cut(s)	1541
BseBI	CCWGG	4 cut(s)	359, 702, 1407, 1680
BseDI	CCNNGG	3 cut(s)	315, 701, 1830
BseGI	GGATG	6 cut(s)	784, 827, 1121, 1495, 1702, 2047
BseLI	CCNNNNNNNGG	7 cut(s)	53, 516, 775, 791, 1104, 1566, 1685
BseMI	GCAATG	1 cut(s)	1541
BseMII	CTCAG	9 cut(s)	60, 278, 340, 509, 1538, 1755, 1895, 1977, 2025
BseNI	ACTGG	4 cut(s)	857, 1057, 1710, 2041
BseRI	GAGGAG	5 cut(s)	217, 248, 1154, 1337, 1382
BsgI	GTGCAG	4 cut(s)	137, 1326, 1572, 1938
Bsh1236I	CGCG	1 cut(s)	1832
BshFI	GGCC	5 cut(s)	314, 1108, 1296, 1640, 1709
BshNI	GGYRCC	2 cut(s)	56, 1556
BsiHKAI	GWGCWC	1 cut(s)	543
BsiSI	CCGG	2 cut(s)	1222, 1641
BslFI	GGGAC	2 cut(s)	836, 1810
BslI	CCNNNNNNNGG	7 cut(s)	53, 516, 775, 791, 1104, 1566, 1685
BsmAI	GTCTC	3 cut(s)	263, 1851, 2030
BsmFI	GGGAC	2 cut(s)	836, 1810
BsnI	GGCC	5 cut(s)	314, 1108, 1296, 1640, 1709
Bso31I	GGTCTC	2 cut(s)	1851, 2030
Bsp1286I	GDGCHC	1 cut(s)	543
Bsp1407I	TGTACA	1 cut(s)	754
Bsp143I	GATC	9 cut(s)	72, 126, 153, 550, 589, 697, 1195, 1802, 2026
BspACI	CCGC	8 cut(s)	30, 78, 819, 1168, 1211, 1529, 1830, 1832
BspANI	GGCC	5 cut(s)	314, 1108, 1296, 1640, 1709
BspCNI	CTCAG	9 cut(s)	61, 277, 339, 508, 1539, 1756, 1894, 1978, 2026
BspFNI	CGCG	1 cut(s)	1832
BspHI	TCATGA	1 cut(s)	394
BspLI	GGNNCC	5 cut(s)	58, 699, 909, 1522, 1558
BspMAI	CTGCAG	2 cut(s)	790, 818
BspPI	GGATC	4 cut(s)	584, 692, 705, 1810
BspQI	GCTCTTC	1 cut(s)	499
BspT107I	GGYRCC	2 cut(s)	56, 1556
BspTNI	GGTCTC	2 cut(s)	1851, 2030
BsrDI	GCAATG	1 cut(s)	1541
BsrFI	RCCGGY	1 cut(s)	1640
BsrGI	TGTACA	1 cut(s)	754
BsrI	ACTGG	4 cut(s)	857, 1057, 1710, 2041
BssAI	RCCGGY	1 cut(s)	1640
BssECI	CCNNGG	3 cut(s)	315, 701, 1830
BssMI	GATC	9 cut(s)	72, 126, 153, 550, 589, 697, 1195, 1802, 2026
BssT1I	CCWWGG	1 cut(s)	315
Bst2UI	CCWGG	4 cut(s)	359, 702, 1407, 1680
Bst4CI	ACNGT	5 cut(s)	56, 136, 175, 569, 1959
Bst6I	CTCTTC	1 cut(s)	499
BstAPI	GCANNNNNTGC	1 cut(s)	977
BstAUI	TGTACA	1 cut(s)	754
BstBAI	YACGTR	1 cut(s)	1043
BstC8I	GCNNGC	8 cut(s)	420, 811, 821, 825, 978, 1172, 1332, 1995
BstDSI	CCRYGG	1 cut(s)	1830
BstF5I	GGATG	6 cut(s)	784, 827, 1121, 1495, 1702, 2047
BstFNI	CGCG	1 cut(s)	1832
BstH2I	RGCGCY	1 cut(s)	111
BstHHI	GCGC	2 cut(s)	110, 1993
BstKTI	GATC	9 cut(s)	75, 129, 156, 553, 592, 700, 1198, 1805, 2029
BstMAI	GTCTC	3 cut(s)	263, 1851, 2030
BstMBI	GATC	9 cut(s)	72, 126, 153, 550, 589, 697, 1195, 1802, 2026
BstNI	CCWGG	4 cut(s)	359, 702, 1407, 1680
BstNSI	RCATGY	3 cut(s)	980, 987, 1334
BstSCI	CCNGG	4 cut(s)	357, 700, 1405, 1678
BstSFI	CTRYAG	2 cut(s)	786, 814
BstSNI	TACGTA	1 cut(s)	1043
BstUI	CGCG	1 cut(s)	1832
BstV2I	GAAGAC	1 cut(s)	105
BstX2I	RGATCY	4 cut(s)	550, 589, 697, 1802
BstYI	RGATCY	4 cut(s)	550, 589, 697, 1802
BsuRI	GGCC	5 cut(s)	314, 1108, 1296, 1640, 1709
BtgI	CCRYGG	1 cut(s)	1830
BtsCI	GGATG	6 cut(s)	784, 827, 1121, 1495, 1702, 2047
BtsI	GCAGTG	2 cut(s)	1338, 1776
BtsIMutI	CAGTG	5 cut(s)	694, 1064, 1338, 1703, 1776
Cac8I	GCNNGC	8 cut(s)	420, 811, 821, 825, 978, 1172, 1332, 1995
CaiI	CAGNNNCTG	3 cut(s)	124, 1679, 1775
CciI	TCATGA	1 cut(s)	394
CfoI	GCGC	2 cut(s)	110, 1993
Cfr10I	RCCGGY	1 cut(s)	1640
Cfr13I	GGNCC	2 cut(s)	907, 1638
Cfr42I	CCGCGG	1 cut(s)	1833
CsiI	ACCWGGT	1 cut(s)	357
Csp6I	GTAC	5 cut(s)	171, 187, 755, 1320, 1557
CviQI	GTAC	5 cut(s)	171, 187, 755, 1320, 1557
DpnI	GATC	9 cut(s)	74, 128, 155, 552, 591, 699, 1197, 1804, 2028
DpnII	GATC	9 cut(s)	72, 126, 153, 550, 589, 697, 1195, 1802, 2026
EaeI	YGGCCR	2 cut(s)	312, 1707
Eam1104I	CTCTTC	1 cut(s)	499
EarI	CTCTTC	1 cut(s)	499
EciI	GGCGGA	1 cut(s)	1518
Ecl136II	GAGCTC	1 cut(s)	541
Eco105I	TACGTA	1 cut(s)	1043
Eco130I	CCWWGG	1 cut(s)	315
Eco147I	AGGCCT	1 cut(s)	1296
Eco24I	GRGCYC	1 cut(s)	543
Eco31I	GGTCTC	2 cut(s)	1851, 2030
Eco47I	GGWCC	1 cut(s)	907
Eco53kI	GAGCTC	1 cut(s)	541
Eco57I	CTGAAG	2 cut(s)	1287, 1758
EcoICRI	GAGCTC	1 cut(s)	541
EcoO109I	RGGNCCY	1 cut(s)	907
EcoRII	CCWGG	4 cut(s)	357, 700, 1405, 1678
EcoT14I	CCWWGG	1 cut(s)	315
EcoT38I	GRGCYC	1 cut(s)	543
ErhI	CCWWGG	1 cut(s)	315
FalI	AAGNNNNNCTT	2 cut(s)	270, 302
FaqI	GGGAC	2 cut(s)	836, 1810
FauI	CCCGC	2 cut(s)	812, 1204
FauNDI	CATATG	2 cut(s)	937, 1361
FbaI	TGATCA	1 cut(s)	2026
FokI	GGATG	6 cut(s)	791, 814, 1108, 1502, 1709, 2034
FriOI	GRGCYC	1 cut(s)	543
FspBI	CTAG	3 cut(s)	662, 1715, 1728
GlaI	GCGC	2 cut(s)	109, 1992
GsuI	CTGGAG	5 cut(s)	5, 1119, 1416, 1701, 1875
HaeII	RGCGCY	1 cut(s)	111
HaeIII	GGCC	5 cut(s)	314, 1108, 1296, 1640, 1709
HapII	CCGG	2 cut(s)	1222, 1641
HhaI	GCGC	2 cut(s)	110, 1993
Hin6I	GCGC	2 cut(s)	108, 1991
HinP1I	GCGC	2 cut(s)	108, 1991
HincII	GTYRAC	3 cut(s)	17, 139, 2074
HindII	GTYRAC	3 cut(s)	17, 139, 2074
HindIII	AAGCTT	1 cut(s)	420
HinfI	GANTC	7 cut(s)	330, 432, 524, 656, 841, 1313, 1975
HpaII	CCGG	2 cut(s)	1222, 1641
HphI	GGTGA	3 cut(s)	412, 1226, 1906
Hpy166II	GTNNAC	5 cut(s)	6, 17, 139, 171, 2074
Hpy188I	TCNGA	7 cut(s)	160, 306, 329, 335, 460, 1505, 2035
Hpy8I	GTNNAC	5 cut(s)	6, 17, 139, 171, 2074
Hpy99I	CGWCG	1 cut(s)	86
HpyAV	CCTTC	4 cut(s)	898, 1547, 1621, 1733
HpyCH4III	ACNGT	5 cut(s)	56, 136, 175, 569, 1959
HpyCH4IV	ACGT	3 cut(s)	84, 1042, 1237
HpySE526I	ACGT	3 cut(s)	84, 1042, 1237
HspAI	GCGC	2 cut(s)	108, 1991
KpnI	GGTACC	1 cut(s)	1560
Ksp22I	TGATCA	1 cut(s)	2026
KspI	CCGCGG	1 cut(s)	1833
Kzo9I	GATC	9 cut(s)	72, 126, 153, 550, 589, 697, 1195, 1802, 2026
LguI	GCTCTTC	1 cut(s)	499
LmnI	GCTCC	7 cut(s)	319, 373, 415, 787, 1397, 1520, 1757
LweI	GCATC	6 cut(s)	720, 769, 836, 1392, 1567, 1852
MabI	ACCWGGT	1 cut(s)	357
MaeI	CTAG	3 cut(s)	662, 1715, 1728
MaeII	ACGT	3 cut(s)	84, 1042, 1237
MaeIII	GTNAC	7 cut(s)	400, 657, 679, 1336, 1537, 1616, 2043
MalI	GATC	9 cut(s)	74, 128, 155, 552, 591, 699, 1197, 1804, 2028
MboI	GATC	9 cut(s)	72, 126, 153, 550, 589, 697, 1195, 1802, 2026
MboII	GAAGA	6 cut(s)	110, 516, 618, 730, 1205, 1582
MflI	RGATCY	4 cut(s)	550, 589, 697, 1802
MhlI	GDGCHC	1 cut(s)	543
MlsI	TGGCCA	1 cut(s)	1709
MluCI	AATT	8 cut(s)	193, 378, 626, 741, 1099, 1158, 1401, 1506
MluNI	TGGCCA	1 cut(s)	1709
MlyI	GAGTC	2 cut(s)	665, 1307
MmeI	TCCRAC	1 cut(s)	183
Mox20I	TGGCCA	1 cut(s)	1709
MscI	TGGCCA	1 cut(s)	1709
MseI	TTAA	7 cut(s)	425, 468, 744, 899, 1011, 1113, 1596
Msp20I	TGGCCA	1 cut(s)	1709
MspA1I	CMGCKG	4 cut(s)	596, 819, 1460, 1832
MspI	CCGG	2 cut(s)	1222, 1641
MspR9I	CCNGG	4 cut(s)	359, 702, 1407, 1680
MvaI	CCWGG	4 cut(s)	359, 702, 1407, 1680
MvnI	CGCG	1 cut(s)	1832
NdeI	CATATG	2 cut(s)	937, 1361
NdeII	GATC	9 cut(s)	72, 126, 153, 550, 589, 697, 1195, 1802, 2026
NlaIV	GGNNCC	5 cut(s)	58, 699, 909, 1522, 1558
NmeAIII	GCCGAG	1 cut(s)	1084
NmuCI	GTSAC	4 cut(s)	400, 657, 1336, 2043
NspI	RCATGY	3 cut(s)	980, 987, 1334
PaeI	GCATGC	2 cut(s)	980, 1334
PagI	TCATGA	1 cut(s)	394
PceI	AGGCCT	1 cut(s)	1296
PciI	ACATGT	1 cut(s)	983
PciSI	GCTCTTC	1 cut(s)	499
PcsI	WCGNNNNNNNCGW	1 cut(s)	81
PfeI	GAWTC	5 cut(s)	330, 432, 524, 841, 1975
PflFI	GACNNNGTC	3 cut(s)	134, 911, 2041
PleI	GAGTC	2 cut(s)	664, 1307
PpsI	GAGTC	2 cut(s)	664, 1307
Ppu21I	YACGTR	1 cut(s)	1043
PpuMI	RGGWCCY	1 cut(s)	907
PscI	ACATGT	1 cut(s)	983
Psp124BI	GAGCTC	1 cut(s)	543
Psp5II	RGGWCCY	1 cut(s)	907
Psp6I	CCWGG	4 cut(s)	357, 700, 1405, 1678
PspGI	CCWGG	4 cut(s)	357, 700, 1405, 1678
PspN4I	GGNNCC	5 cut(s)	58, 699, 909, 1522, 1558
PspPI	GGNCC	2 cut(s)	907, 1638
PspPPI	RGGWCCY	1 cut(s)	907
PstI	CTGCAG	2 cut(s)	790, 818
PstNI	CAGNNNCTG	3 cut(s)	124, 1679, 1775
PsuI	RGATCY	4 cut(s)	550, 589, 697, 1802
PsyI	GACNNNGTC	3 cut(s)	134, 911, 2041
PvuII	CAGCTG	2 cut(s)	596, 1460
RsaI	GTAC	5 cut(s)	172, 188, 756, 1321, 1558
RsaNI	GTAC	5 cut(s)	171, 187, 755, 1320, 1557
SacI	GAGCTC	1 cut(s)	543
SacII	CCGCGG	1 cut(s)	1833
SapI	GCTCTTC	1 cut(s)	499
SaqAI	TTAA	7 cut(s)	425, 468, 744, 899, 1011, 1113, 1596
Sau3AI	GATC	9 cut(s)	72, 126, 153, 550, 589, 697, 1195, 1802, 2026
Sau96I	GGNCC	2 cut(s)	907, 1638
SbfI	CCTGCAGG	1 cut(s)	790
ScaI	AGTACT	1 cut(s)	188
SchI	GAGTC	2 cut(s)	665, 1307
ScrFI	CCNGG	4 cut(s)	359, 702, 1407, 1680
SdaI	CCTGCAGG	1 cut(s)	790
SduI	GDGCHC	1 cut(s)	543
SexAI	ACCWGGT	1 cut(s)	357
SfaNI	GCATC	6 cut(s)	720, 769, 836, 1392, 1567, 1852
SfcI	CTRYAG	2 cut(s)	786, 814
Sfr303I	CCGCGG	1 cut(s)	1833
SgrBI	CCGCGG	1 cut(s)	1833
SinI	GGWCC	1 cut(s)	907
SmlI	CTYRAG	2 cut(s)	1424, 1964
SmoI	CTYRAG	2 cut(s)	1424, 1964
SnaBI	TACGTA	1 cut(s)	1043
SphI	GCATGC	2 cut(s)	980, 1334
Sse8387I	CCTGCAGG	1 cut(s)	790
Sse9I	AATT	8 cut(s)	193, 378, 626, 741, 1099, 1158, 1401, 1506
SseBI	AGGCCT	1 cut(s)	1296
SsiI	CCGC	8 cut(s)	30, 78, 819, 1168, 1211, 1529, 1830, 1832
SspMI	CTAG	3 cut(s)	662, 1715, 1728
SstI	GAGCTC	1 cut(s)	543
StuI	AGGCCT	1 cut(s)	1296
StyD4I	CCNGG	4 cut(s)	357, 700, 1405, 1678
StyI	CCWWGG	1 cut(s)	315
TaaI	ACNGT	5 cut(s)	56, 136, 175, 569, 1959
TaiI	ACGT	3 cut(s)	87, 1045, 1240
TaqI	TCGA	7 cut(s)	129, 152, 231, 409, 522, 714, 1652
TasI	AATT	8 cut(s)	193, 378, 626, 741, 1099, 1158, 1401, 1506
TatI	WGTACW	2 cut(s)	186, 754
TauI	GCSGC	2 cut(s)	81, 1832
TfiI	GAWTC	5 cut(s)	330, 432, 524, 841, 1975
Tru1I	TTAA	7 cut(s)	425, 468, 744, 899, 1011, 1113, 1596
Tru9I	TTAA	7 cut(s)	425, 468, 744, 899, 1011, 1113, 1596
TscAI	CASTG	5 cut(s)	694, 1064, 1345, 1710, 1776
TseFI	GTSAC	4 cut(s)	400, 657, 1336, 2043
Tsp45I	GTSAC	4 cut(s)	400, 657, 1336, 2043
TspRI	CASTG	5 cut(s)	694, 1064, 1345, 1710, 1776
Tth111I	GACNNNGTC	3 cut(s)	134, 911, 2041
VpaK11BI	GGWCC	1 cut(s)	907
XapI	RAATTY	1 cut(s)	1158
XceI	RCATGY	3 cut(s)	980, 987, 1334
XspI	CTAG	3 cut(s)	662, 1715, 1728
ZrmI	AGTACT	1 cut(s)	188

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.