Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr11

Orthogroup ID

OG0009627

Physical Location & Seq

Genomic Coordinates Forward (+)

9890203 .. 9895500

Gene Structure 5298 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD11G1111800.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1338 bp

ATGGCGAAGACTCTCATCTCATCCACGCCCTTCGTCGGCGCATCTCTGCCGTCCGTCTCCCGCCGTGGGTCCTACGCCCTCCCCTACCGCAGCACTGGACTCGCCACCACCAGAATCAGGCTCAGCCTGCACGACTCCGTTCCTCCGATGAACCCCTTCGACCACTCGGCCGTCGACGTCGCCTCGCTTTTGAGCCGCGCCGAGGGACTTCTTTACACTATTGCCGACGCCGCCGTGGCCGTCGACCCGAGCTCCACCGACGCCACCGCTCAGAAGAACGGCGGTTGGTTCGGCTTCATCTCCGACGCCATGGAGTTCGTGCTTAAGATTCTGAAAGGCGGACTTGAGACCGTGCACGTGCCGTATGCATACGGCTTTGCAATTATACTGCTTACAATTATCGTCAAACTTGCCACATTGCCGCTCACAAAACAACAGGTGGAATCGACGTTAGCGATGCAAAACCTTCAACCAAAACTTAAGGCCATACAAAAGAGATACGAGGGCAATACGGAAAGAATACAACTTGAGACATCACGGCTGTATCGGCAGGCAGGGGTTAATCCATTGGCAGGGTGTTTACCAACTTTGGCCACAATACCGGTTTGGATAGGTCTATATCAAGCTCTTTCAAATGTGGCAAATGAGGGATTGTTGACAGAAGGTTTCTTTTGGATCCCCTCTTTGGGTGGCCCAACAACAATTGCTGCTCGACAAAGTGGTTCTGGCATTTCGTGGCTGTTTCCCTTTGTGGATGGACATCCACCGTTGGGCTGGTCTGACACTGCAGCATACCTTGTTTTGCCTGTCCTCCTTGTTGCTTCTCAGTATGTTTCAATGGAGATCATGAAGCCTCCACAGACTGATGATCCAGCTCAAAAGAACACTCTTCTTGTATTCAAGTTTCTTCCCCTCATGATTGGTTACTTCTCCTTATCCGTTCCTTCAGGATTGTCAATTTACTGGTTCACAAACAATGTCCTCAGCACGGCACAACAAGTATGGCTACGCAGATTAGGAGGTGCAAAGCCTATTGTGAATGAGAATGCAAGTGGAATCATTACAGCAGGACGTGCAAAGCGATCAGATTCTCAGCCAGTAGAAGCTGGCAGTAGATTTAGGAAGTTAAGAGAAGAAGAGAAAAAGAAGGAGTTGAGCAAGGCATTAGCAAATGAAGAGGTTCTGACTTCTGATTCTGAAGATGGTCCAGATGAAGAAAGTATTGACAAGGGTGAGGAGGTTCTAGAAGAGTTGTACGCGTCTAGTGTTGGAAAAGAGCTTCCAAATGATCCTCGACCAAGGAGAAGCAAGCGATCTAAAAGGAAGCGTGCTGCATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006605 GO:0006612 GO:0006810 GO:0006886 GO:0006996 GO:0008104 GO:0008150 GO:0009507 GO:0009534 GO:0009535 GO:0009536 GO:0009579 GO:0009657 GO:0009668 GO:0009987 GO:0010027 GO:0015031 GO:0015833 GO:0016020 GO:0016043 GO:0017038 GO:0019904 GO:0022607 GO:0031976 GO:0031984 GO:0032991 GO:0033036 GO:0033365 GO:0034357 GO:0034613 GO:0042651 GO:0042886 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043933 GO:0044085 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044436 GO:0044444 GO:0044446 GO:0044464 GO:0044743 GO:0045036 GO:0045038 GO:0045184 GO:0046907 GO:0050789 GO:0050793 GO:0050794 GO:0051179 GO:0051234 GO:0051259 GO:0051291 GO:0051641 GO:0051649 GO:0055035 GO:0055085 GO:0061024 GO:0065002 GO:0065003 GO:0065007 GO:0070206 GO:0070208 GO:0070727 GO:0071702 GO:0071705 GO:0071806 GO:0071840 GO:0072594 GO:0072596 GO:0072598 GO:0072657 GO:0090150 GO:0090342

KEGG Pathways

Metabolic & Signaling

ko02024 ko03060 ko03070 map02024 map03060 map03070

Pfam Domains

Protein Families

60KD_IMP

Protein Analysis

446

Amino Acids

48.52

Weight (kDa)

9.02

Isoelectric Point (pI)

45.85

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
60KD_IMP	PF02096	124 - 338	1.2e-51	60Kd inner membrane protein

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009627)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G28800 AT2G28800 AT2G28800 AT2G28800
fragaria_vesca	FvH4_3g35720 FvH4_3g35720 FvH4_3g35720
malus_domestica	MD00G1137500.v1.1 MD11G1111800.v1.1
prunus_persica	Prupe.6G080200_v2.0.a1
pyrus_communis	pycom03g07940 pycom11g09240
rosa_chinensis	RchiOBHm_Chr5g0063871
rosa_laevigata	RLG00000035687
rosa_multiflora	Rmu_sc0000552.1_g000018
rosa_roxburghii	Rroxscaffold_1G00016910
rosa_rugosa	Rorug05G0360900
rosa_samantha	Rh5AG419300 Rh5BG435300 Rh5CG458400 Rh5DG448200
rosa_wichuraiana	Rw5G039400

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	180
AccBSI	CCGCTC	2 cut(s)	269, 424
AccI	GTMKAC	2 cut(s)	174, 243
AccII	CGCG	2 cut(s)	198, 1259
AciI	CCGC	8 cut(s)	61, 88, 196, 231, 267, 282, 339, 422
AclWI	GGATC	4 cut(s)	670, 683, 863, 1283
AcoI	YGGCCR	3 cut(s)	168, 237, 591
AcuI	CTGAAG	2 cut(s)	930, 1218
AcvI	CACGTG	1 cut(s)	358
AcyI	GRCGYC	4 cut(s)	177, 228, 261, 306
AfaI	GTAC	1 cut(s)	1256
AfiI	CCNNNNNNNGG	9 cut(s)	35, 66, 117, 202, 572, 685, 686, 770, 988
AflII	CTTAAG	2 cut(s)	323, 479
AflIII	ACRYGT	1 cut(s)	1257
AgeI	ACCGGT	1 cut(s)	601
AgsI	TTSAA	4 cut(s)	470, 633, 837, 901
AjiI	CACGTC	1 cut(s)	1073
AluBI	AGCT	5 cut(s)	252, 626, 875, 1106, 1279
AluI	AGCT	5 cut(s)	252, 626, 875, 1106, 1279
Alw21I	GWGCWC	2 cut(s)	254, 357
Alw26I	GTCTC	3 cut(s)	61, 341, 524
Alw44I	GTGCAC	1 cut(s)	353
AlwI	GGATC	4 cut(s)	670, 683, 863, 1283
Ama87I	CYCGRG	1 cut(s)	247
AoxI	GGCC	5 cut(s)	168, 237, 483, 591, 691
ApaLI	GTGCAC	1 cut(s)	353
ApeKI	GCWGC	4 cut(s)	90, 707, 788, 1331
AsiGI	ACCGGT	1 cut(s)	601
Asp700I	GAANNNNTTC	2 cut(s)	155, 1179
AspLEI	GCGC	2 cut(s)	41, 200
AspS9I	GGNCC	3 cut(s)	69, 692, 1205
AsuHPI	GGTGA	1 cut(s)	1244
AvaI	CYCGRG	1 cut(s)	247
AvaII	GGWCC	2 cut(s)	69, 1205
BaeGI	GKGCMC	1 cut(s)	357
BaeI	ACNNNNGTAYC	2 cut(s)	527, 560
BalI	TGGCCA	1 cut(s)	593
BamHI	GGATCC	1 cut(s)	675
BanII	GRGCYC	1 cut(s)	254
BbrPI	CACGTG	1 cut(s)	358
BbsI	GAAGAC	1 cut(s)	14
Bbv12I	GWGCWC	2 cut(s)	254, 357
BbvCI	CCTCAGC	1 cut(s)	983
BbvI	GCAGC	4 cut(s)	102, 694, 800, 1318
BccI	CCATC	2 cut(s)	749, 1196
BcgI	CGANNNNNNTGC	2 cut(s)	82, 116
BcoDI	GTCTC	3 cut(s)	61, 341, 524
BfaI	CTAG	2 cut(s)	1244, 1263
BfmI	CTRYAG	1 cut(s)	786
BfrI	CTTAAG	2 cut(s)	323, 479
BglI	GCCNNNNNGGC	1 cut(s)	236
BisI	GCNGC	7 cut(s)	91, 196, 231, 422, 708, 789, 1332
BlpI	GCTNAGC	1 cut(s)	122
BlsI	GCNGC	7 cut(s)	92, 197, 232, 423, 709, 790, 1333
Bme18I	GGWCC	2 cut(s)	69, 1205
BmeT110I	CYCGRG	1 cut(s)	247
BmgBI	CACGTC	1 cut(s)	1073
BmgT120I	GGNCC	3 cut(s)	69, 692, 1205
BmiI	GGNNCC	2 cut(s)	70, 677
BmsI	GCATC	2 cut(s)	50, 447
BpiI	GAAGAC	1 cut(s)	14
Bpu10I	CCTNAGC	1 cut(s)	983
Bpu1102I	GCTNAGC	1 cut(s)	122
BpuEI	CTTGAG	2 cut(s)	365, 548
BsaAI	YACGTR	1 cut(s)	358
BsaBI	GATNNNNATC	1 cut(s)	759
BsaHI	GRCGYC	4 cut(s)	177, 228, 261, 306
BsaI	GGTCTC	1 cut(s)	341
BsaJI	CCNNGG	5 cut(s)	64, 201, 234, 309, 1298
BsaWI	WCCGGW	1 cut(s)	601
BsaXI	ACNNNNNCTCC	2 cut(s)	236, 266
Bsc4I	CCNNNNNNNGG	9 cut(s)	35, 66, 117, 202, 572, 685, 686, 770, 988
Bse118I	RCCGGY	1 cut(s)	601
Bse1I	ACTGG	3 cut(s)	100, 968, 1097
Bse3DI	GCAATG	1 cut(s)	416
Bse8I	GATNNNNATC	1 cut(s)	759
BseDI	CCNNGG	5 cut(s)	64, 201, 234, 309, 1298
BseGI	GGATG	3 cut(s)	20, 760, 760
BseJI	GATNNNNATC	1 cut(s)	759
BseLI	CCNNNNNNNGG	9 cut(s)	35, 66, 117, 202, 572, 685, 686, 770, 988
BseMI	GCAATG	1 cut(s)	416
BseMII	CTCAG	5 cut(s)	136, 284, 839, 997, 1106
BseNI	ACTGG	3 cut(s)	100, 968, 1097
BseRI	GAGGAG	1 cut(s)	1250
BseSI	GKGCMC	1 cut(s)	357
BseX3I	CGGCCG	1 cut(s)	168
BseXI	GCAGC	4 cut(s)	102, 694, 800, 1318
BsgI	GTGCAG	1 cut(s)	113
Bsh1236I	CGCG	2 cut(s)	198, 1259
Bsh1285I	CGRYCG	1 cut(s)	171
BshFI	GGCC	5 cut(s)	170, 239, 485, 593, 693
BshTI	ACCGGT	1 cut(s)	601
BsiEI	CGRYCG	1 cut(s)	171
BsiHKAI	GWGCWC	2 cut(s)	254, 357
BsiHKCI	CYCGRG	1 cut(s)	247
BsiSI	CCGG	1 cut(s)	602
BslFI	GGGAC	1 cut(s)	219
BslI	CCNNNNNNNGG	9 cut(s)	35, 66, 117, 202, 572, 685, 686, 770, 988
BsmAI	GTCTC	3 cut(s)	61, 341, 524
BsmBI	CGTCTC	1 cut(s)	61
BsmFI	GGGAC	1 cut(s)	219
BsmI	GAATGC	1 cut(s)	1051
BsnI	GGCC	5 cut(s)	170, 239, 485, 593, 693
Bso31I	GGTCTC	1 cut(s)	341
BsoBI	CYCGRG	1 cut(s)	247
Bsp1286I	GDGCHC	2 cut(s)	254, 357
Bsp143I	GATC	6 cut(s)	675, 843, 868, 1082, 1288, 1313
Bsp1720I	GCTNAGC	1 cut(s)	122
Bsp19I	CCATGG	1 cut(s)	309
BspACI	CCGC	8 cut(s)	61, 88, 196, 231, 267, 282, 339, 422
BspANI	GGCC	5 cut(s)	170, 239, 485, 593, 693
BspCNI	CTCAG	5 cut(s)	135, 283, 838, 996, 1105
BspFNI	CGCG	2 cut(s)	198, 1259
BspHI	TCATGA	2 cut(s)	846, 915
BspLI	GGNNCC	2 cut(s)	70, 677
BspMAI	CTGCAG	1 cut(s)	790
BspPI	GGATC	4 cut(s)	670, 683, 863, 1283
BspTI	CTTAAG	2 cut(s)	323, 479
BspTNI	GGTCTC	1 cut(s)	341
BsrBI	CCGCTC	2 cut(s)	269, 424
BsrDI	GCAATG	1 cut(s)	416
BsrFI	RCCGGY	1 cut(s)	601
BsrI	ACTGG	3 cut(s)	100, 968, 1097
BssAI	RCCGGY	1 cut(s)	601
BssECI	CCNNGG	5 cut(s)	64, 201, 234, 309, 1298
BssMI	GATC	6 cut(s)	675, 843, 868, 1082, 1288, 1313
BssNI	GRCGYC	4 cut(s)	177, 228, 261, 306
BssT1I	CCWWGG	2 cut(s)	309, 1298
Bst4CI	ACNGT	2 cut(s)	352, 768
Bst6I	CTCTTC	4 cut(s)	894, 1131, 1170, 1242
BstACI	GRCGYC	4 cut(s)	177, 228, 261, 306
BstAFI	CTTAAG	2 cut(s)	323, 479
BstAPI	GCANNNNNTGC	1 cut(s)	1073
BstBAI	YACGTR	1 cut(s)	358
BstC8I	GCNNGC	5 cut(s)	128, 552, 1108, 1310, 1329
BstDEI	CTNAG	5 cut(s)	122, 270, 825, 983, 1092
BstDSI	CCRYGG	3 cut(s)	64, 234, 309
BstF5I	GGATG	3 cut(s)	20, 760, 760
BstFNI	CGCG	2 cut(s)	198, 1259
BstHHI	GCGC	2 cut(s)	41, 200
BstKTI	GATC	6 cut(s)	678, 846, 871, 1085, 1291, 1316
BstMAI	GTCTC	3 cut(s)	61, 341, 524
BstMBI	GATC	6 cut(s)	675, 843, 868, 1082, 1288, 1313
BstMCI	CGRYCG	1 cut(s)	171
BstMWI	GCNNNNNNNGC	5 cut(s)	127, 230, 236, 547, 1073
BstSFI	CTRYAG	1 cut(s)	786
BstSLI	GKGCMC	1 cut(s)	357
BstUI	CGCG	2 cut(s)	198, 1259
BstV1I	GCAGC	4 cut(s)	102, 694, 800, 1318
BstV2I	GAAGAC	1 cut(s)	14
BstX2I	RGATCY	1 cut(s)	675
BstYI	RGATCY	1 cut(s)	675
BstZI	CGGCCG	1 cut(s)	168
BsuRI	GGCC	5 cut(s)	170, 239, 485, 593, 693
BtgI	CCRYGG	3 cut(s)	64, 234, 309
BtgZI	GCGATG	1 cut(s)	470
BtrI	CACGTC	1 cut(s)	1073
BtsCI	GGATG	3 cut(s)	20, 760, 760
BtsI	GCAGTG	1 cut(s)	783
BtsIMutI	CAGTG	2 cut(s)	93, 783
Cac8I	GCNNGC	5 cut(s)	128, 552, 1108, 1310, 1329
CciI	TCATGA	2 cut(s)	846, 915
CfoI	GCGC	2 cut(s)	41, 200
Cfr10I	RCCGGY	1 cut(s)	601
Cfr13I	GGNCC	3 cut(s)	69, 692, 1205
CseI	GACGC	4 cut(s)	236, 269, 314, 1248
Csp6I	GTAC	1 cut(s)	1255
CspAI	ACCGGT	1 cut(s)	601
CviAII	CATG	3 cut(s)	310, 847, 916
CviQI	GTAC	1 cut(s)	1255
DdeI	CTNAG	5 cut(s)	122, 270, 825, 983, 1092
DpnI	GATC	6 cut(s)	677, 845, 870, 1084, 1290, 1315
DpnII	GATC	6 cut(s)	675, 843, 868, 1082, 1288, 1313
EaeI	YGGCCR	3 cut(s)	168, 237, 591
EagI	CGGCCG	1 cut(s)	168
Eam1104I	CTCTTC	4 cut(s)	894, 1131, 1170, 1242
EarI	CTCTTC	4 cut(s)	894, 1131, 1170, 1242
EciI	GGCGGA	1 cut(s)	354
Ecl136II	GAGCTC	1 cut(s)	252
EclXI	CGGCCG	1 cut(s)	168
Eco130I	CCWWGG	2 cut(s)	309, 1298
Eco24I	GRGCYC	1 cut(s)	254
Eco31I	GGTCTC	1 cut(s)	341
Eco47I	GGWCC	2 cut(s)	69, 1205
Eco52I	CGGCCG	1 cut(s)	168
Eco53kI	GAGCTC	1 cut(s)	252
Eco57I	CTGAAG	2 cut(s)	930, 1218
Eco72I	CACGTG	1 cut(s)	358
Eco88I	CYCGRG	1 cut(s)	247
EcoICRI	GAGCTC	1 cut(s)	252
EcoO109I	RGGNCCY	1 cut(s)	69
EcoT14I	CCWWGG	2 cut(s)	309, 1298
EcoT22I	ATGCAT	1 cut(s)	370
EcoT38I	GRGCYC	1 cut(s)	254
ErhI	CCWWGG	2 cut(s)	309, 1298
Esp3I	CGTCTC	1 cut(s)	61
FaeI	CATG	3 cut(s)	313, 850, 919
FalI	AAGNNNNNCTT	2 cut(s)	327, 359
FaqI	GGGAC	1 cut(s)	219
FatI	CATG	3 cut(s)	309, 846, 915
FauI	CCCGC	1 cut(s)	68
FblI	GTMKAC	2 cut(s)	174, 243
Fnu4HI	GCNGC	7 cut(s)	91, 196, 231, 422, 708, 789, 1332
FokI	GGATG	3 cut(s)	7, 747, 767
FriOI	GRGCYC	1 cut(s)	254
Fsp4HI	GCNGC	7 cut(s)	91, 196, 231, 422, 708, 789, 1332
FspBI	CTAG	2 cut(s)	1244, 1263
GlaI	GCGC	2 cut(s)	40, 199
GluI	GCNGC	7 cut(s)	91, 196, 231, 422, 708, 789, 1332
HaeIII	GGCC	5 cut(s)	170, 239, 485, 593, 693
HapII	CCGG	1 cut(s)	602
HgaI	GACGC	4 cut(s)	236, 269, 314, 1248
HhaI	GCGC	2 cut(s)	41, 200
Hin1I	GRCGYC	4 cut(s)	177, 228, 261, 306
Hin1II	CATG	3 cut(s)	313, 850, 919
Hin6I	GCGC	2 cut(s)	39, 198
HinP1I	GCGC	2 cut(s)	39, 198
HincII	GTYRAC	3 cut(s)	175, 244, 657
HindII	GTYRAC	3 cut(s)	175, 244, 657
HinfI	GANTC	9 cut(s)	10, 99, 114, 134, 328, 443, 1056, 1088, 1193
HpaII	CCGG	1 cut(s)	602
HphI	GGTGA	1 cut(s)	1244
Hpy166II	GTNNAC	6 cut(s)	175, 244, 355, 581, 657, 969
Hpy188I	TCNGA	9 cut(s)	147, 273, 304, 333, 781, 1087, 1185, 1192, 1198
Hpy188III	TCNNGA	5 cut(s)	847, 916, 948, 1208, 1244
Hpy8I	GTNNAC	6 cut(s)	175, 244, 355, 581, 657, 969
Hpy99I	CGWCG	9 cut(s)	38, 176, 179, 182, 230, 245, 263, 308, 451
HpyAV	CCTTC	6 cut(s)	40, 166, 476, 656, 954, 1141
HpyCH4III	ACNGT	2 cut(s)	352, 768
HpyCH4IV	ACGT	4 cut(s)	177, 357, 449, 1072
HpyF10VI	GCNNNNNNNGC	5 cut(s)	127, 230, 236, 547, 1073
HpyF3I	CTNAG	5 cut(s)	122, 270, 825, 983, 1092
HpySE526I	ACGT	4 cut(s)	177, 357, 449, 1072
Hsp92I	GRCGYC	4 cut(s)	177, 228, 261, 306
Hsp92II	CATG	3 cut(s)	313, 850, 919
HspAI	GCGC	2 cut(s)	39, 198
Kzo9I	GATC	6 cut(s)	675, 843, 868, 1082, 1288, 1313
LmnI	GCTCC	1 cut(s)	257
Lsp1109I	GCAGC	4 cut(s)	102, 694, 800, 1318
LweI	GCATC	2 cut(s)	50, 447
MaeI	CTAG	2 cut(s)	1244, 1263
MaeII	ACGT	4 cut(s)	177, 357, 449, 1072
MaeIII	GTNAC	1 cut(s)	923
MalI	GATC	6 cut(s)	677, 845, 870, 1084, 1290, 1315
MbiI	CCGCTC	2 cut(s)	269, 424
MboI	GATC	6 cut(s)	675, 843, 868, 1082, 1288, 1313
MfeI	CAATTG	1 cut(s)	702
MflI	RGATCY	1 cut(s)	675
MhlI	GDGCHC	2 cut(s)	254, 357
MlsI	TGGCCA	1 cut(s)	593
MluCI	AATT	4 cut(s)	381, 396, 702, 957
MluI	ACGCGT	1 cut(s)	1257
MluNI	TGGCCA	1 cut(s)	593
MlyI	GAGTC	3 cut(s)	4, 93, 128
MmeI	TCCRAC	2 cut(s)	327, 1249
Mox20I	TGGCCA	1 cut(s)	593
Mph1103I	ATGCAT	1 cut(s)	370
MroXI	GAANNNNTTC	2 cut(s)	155, 1179
MscI	TGGCCA	1 cut(s)	593
MseI	TTAA	4 cut(s)	324, 480, 561, 1127
Msp20I	TGGCCA	1 cut(s)	593
MspCI	CTTAAG	2 cut(s)	323, 479
MspI	CCGG	1 cut(s)	602
MunI	CAATTG	1 cut(s)	702
Mva1269I	GAATGC	1 cut(s)	1051
MvnI	CGCG	2 cut(s)	198, 1259
MwoI	GCNNNNNNNGC	5 cut(s)	127, 230, 236, 547, 1073
NcoI	CCATGG	1 cut(s)	309
NdeII	GATC	6 cut(s)	675, 843, 868, 1082, 1288, 1313
NlaIII	CATG	3 cut(s)	313, 850, 919
NlaIV	GGNNCC	2 cut(s)	70, 677
NmeAIII	GCCGAG	2 cut(s)	146, 226
NsiI	ATGCAT	1 cut(s)	370
PagI	TCATGA	2 cut(s)	846, 915
PcsI	WCGNNNNNNNCGW	2 cut(s)	452, 1078
PctI	GAATGC	1 cut(s)	1051
PdmI	GAANNNNTTC	2 cut(s)	155, 1179
PfeI	GAWTC	6 cut(s)	114, 328, 443, 1056, 1088, 1193
PinAI	ACCGGT	1 cut(s)	601
PkrI	GCNGC	7 cut(s)	92, 197, 232, 423, 709, 790, 1333
PleI	GAGTC	3 cut(s)	4, 93, 128
PmaCI	CACGTG	1 cut(s)	358
PmlI	CACGTG	1 cut(s)	358
PpsI	GAGTC	3 cut(s)	4, 93, 128
Ppu21I	YACGTR	1 cut(s)	358
PpuMI	RGGWCCY	1 cut(s)	69
Psp124BI	GAGCTC	1 cut(s)	254
Psp5II	RGGWCCY	1 cut(s)	69
PspCI	CACGTG	1 cut(s)	358
PspN4I	GGNNCC	2 cut(s)	70, 677
PspPI	GGNCC	3 cut(s)	69, 692, 1205
PspPPI	RGGWCCY	1 cut(s)	69
PstI	CTGCAG	1 cut(s)	790
PsuI	RGATCY	1 cut(s)	675
RsaI	GTAC	1 cut(s)	1256
RsaNI	GTAC	1 cut(s)	1255
SacI	GAGCTC	1 cut(s)	254
SalI	GTCGAC	2 cut(s)	173, 242
SaqAI	TTAA	4 cut(s)	324, 480, 561, 1127
SatI	GCNGC	7 cut(s)	91, 196, 231, 422, 708, 789, 1332
Sau3AI	GATC	6 cut(s)	675, 843, 868, 1082, 1288, 1313
Sau96I	GGNCC	3 cut(s)	69, 692, 1205
SchI	GAGTC	3 cut(s)	4, 93, 128
SduI	GDGCHC	2 cut(s)	254, 357
SfaNI	GCATC	2 cut(s)	50, 447
SfcI	CTRYAG	1 cut(s)	786
SgrDI	CGTCGACG	1 cut(s)	173
SinI	GGWCC	2 cut(s)	69, 1205
SmlI	CTYRAG	4 cut(s)	323, 344, 479, 527
SmoI	CTYRAG	4 cut(s)	323, 344, 479, 527
Sse9I	AATT	4 cut(s)	381, 396, 702, 957
SsiI	CCGC	8 cut(s)	61, 88, 196, 231, 267, 282, 339, 422
SspMI	CTAG	2 cut(s)	1244, 1263
SstI	GAGCTC	1 cut(s)	254
StyI	CCWWGG	2 cut(s)	309, 1298
TaaI	ACNGT	2 cut(s)	352, 768
TaiI	ACGT	4 cut(s)	180, 360, 452, 1075
TaqI	TCGA	6 cut(s)	159, 174, 243, 446, 712, 1294
TasI	AATT	4 cut(s)	381, 396, 702, 957
TauI	GCSGC	3 cut(s)	198, 233, 424
TfiI	GAWTC	6 cut(s)	114, 328, 443, 1056, 1088, 1193
Tru1I	TTAA	4 cut(s)	324, 480, 561, 1127
Tru9I	TTAA	4 cut(s)	324, 480, 561, 1127
TscAI	CASTG	2 cut(s)	100, 790
TseI	GCWGC	4 cut(s)	90, 707, 788, 1331
TspDTI	ATGAA	5 cut(s)	164, 286, 863, 1188, 1227
TspGWI	ACGGA	4 cut(s)	43, 127, 527, 928
TspRI	CASTG	2 cut(s)	100, 790
Vha464I	CTTAAG	2 cut(s)	323, 479
VneI	GTGCAC	1 cut(s)	353
VpaK11BI	GGWCC	2 cut(s)	69, 1205
XbaI	TCTAGA	1 cut(s)	1243
XcmI	CCANNNNNNNNNTGG	1 cut(s)	771
XmiI	GTMKAC	2 cut(s)	174, 243
XmnI	GAANNNNTTC	2 cut(s)	155, 1179
XspI	CTAG	2 cut(s)	1244, 1263
ZraI	GACGTC	1 cut(s)	178
Zsp2I	ATGCAT	1 cut(s)	370

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.