Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5B

Orthogroup ID

OG0009627

Physical Location & Seq

Genomic Coordinates Reverse (-)

70015090 .. 70021459

Gene Structure 6370 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5BG435300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1314 bp

ATGGCGAAGACTCTAATCTCATCCACGCCGTTCATCGGCACATCTCTACCGTCCCTCTCTCGCCGCGTGTCCTACACCCTCCCCTACCACCGCAGTGGAAATGGACTCGTCACCACCAGAATCAAGTTCAGCCTCCACGACGTGCCTCCGATCAATCCCTTCGACTCCGGCGTCGATCTCACCGCGCTTTACAGCCGAGCCGAAGGTCTTCTTTACACCCTAGCCGATGCTGCCGTCGCCGTGGACCCGACTGCCTCCGGCGCCGGCGACGCTGCTGTCGACGCGTCTCAGAAGAGCGGCGGATGGTTCGGTTTCATCTCCGACGCCATGGAATTCGTGCTCAAGATTTTGAAAGATGGACTTTCAGCTGTGCATGTGCCATATGCTTACGGTTTCGCAATTATATTGCTTACAGTTATCGTTAAAGTTGTCACATTGCCTCTCACAAAGCAACAGGTGGAATCCACATTGGCTATGCAAAACCTGCAACCAAAAATCAAAGCCATTCAAGAAAGATATAAAGGAAACCAGGAAAGAATACAACTTGAGACATCAAGGCTGTATCGGCAGGCTGGGGTTAATCCATTAGCAGGTTGTTTACCAACTCTGGCCACAATACCAGTCTGGATAGGTCTATACCAAGCTCTTTCAAATGTGGCAAATGAGGGATTGTTGACAGAAGGTTTCTTTTGGATCCCCTCTTTGGGTGGTCCAACTACAATCGCCGCTCGCCAAAGTGGATCAGGGATTTCTTGGCTGTTTCCATTTGTGGATGGGCATCCACCATTAGGCTGGTCTGACACTGCAGCATACCTAGTTTTACCTGTCCTCCTTGTTGTTTCTCAATTTGTTTCAATGGAGCTCATGAAGCCTCCACAGACGGATGACCCAACTCAAAAGAACACACTTCTTGTATTCAAGTTTTTACCCCTCATGATTGGTTACTTCTCCTTGTCCGTTCCATCGGGATTATCAATTTACTGGTTCACAAACAATGTACTTAGCACAGCACAGCAAGTATGGCTACGCAAATTAGGAGGTGCTAAGCCTGTTGTGAATGAGAATGCAAGTGGAATCATTTCAGCAGGTCGTGCAAAGCGATCAGATTCTCAGCCTGCACAACCTGGCAGTAGATTTAAGCAGTTAAGAGAAGATGAGAAAAAGAAAAAGGTGAACAAGGCATTACCGGATGAGGTTCAGACACTGGCTTCTGCATCTGATTCTGAAGAGGGTTCAGATGATCAGACCAATGACAAGTCAATTACAGATGTAGTACCCAATAGCTCCATGCTTCCTCTGAATGGAAACTGGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006605 GO:0006612 GO:0006810 GO:0006886 GO:0006996 GO:0008104 GO:0008150 GO:0009507 GO:0009534 GO:0009535 GO:0009536 GO:0009579 GO:0009657 GO:0009668 GO:0009987 GO:0010027 GO:0015031 GO:0015833 GO:0016020 GO:0016043 GO:0017038 GO:0019904 GO:0022607 GO:0031976 GO:0031984 GO:0032991 GO:0033036 GO:0033365 GO:0034357 GO:0034613 GO:0042651 GO:0042886 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043933 GO:0044085 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044436 GO:0044444 GO:0044446 GO:0044464 GO:0044743 GO:0045036 GO:0045038 GO:0045184 GO:0046907 GO:0050789 GO:0050793 GO:0050794 GO:0051179 GO:0051234 GO:0051259 GO:0051291 GO:0051641 GO:0051649 GO:0055035 GO:0055085 GO:0061024 GO:0065002 GO:0065003 GO:0065007 GO:0070206 GO:0070208 GO:0070727 GO:0071702 GO:0071705 GO:0071806 GO:0071840 GO:0072594 GO:0072596 GO:0072598 GO:0072657 GO:0090150 GO:0090342

KEGG Pathways

Metabolic & Signaling

ko02024 ko03060 ko03070 map02024 map03060 map03070

Pfam Domains

Protein Families

60KD_IMP

Protein Analysis

437

Amino Acids

47.29

Weight (kDa)

8.4

Isoelectric Point (pI)

34.45

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
60KD_IMP	PF02096	130 - 344	2.1e-53	60Kd inner membrane protein

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009627)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G28800 AT2G28800 AT2G28800 AT2G28800
fragaria_vesca	FvH4_3g35720 FvH4_3g35720 FvH4_3g35720
malus_domestica	MD00G1137500.v1.1 MD11G1111800.v1.1
prunus_persica	Prupe.6G080200_v2.0.a1
pyrus_communis	pycom03g07940 pycom11g09240
rosa_chinensis	RchiOBHm_Chr5g0063871
rosa_laevigata	RLG00000035687
rosa_multiflora	Rmu_sc0000552.1_g000018
rosa_roxburghii	Rroxscaffold_1G00016910
rosa_rugosa	Rorug05G0360900
rosa_samantha	Rh5AG419300 Rh5BG435300 Rh5CG458400 Rh5DG448200
rosa_wichuraiana	Rw5G039400

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	2 cut(s)	170, 275
Acc36I	ACCTGC	3 cut(s)	492, 581, 1076
AccB1I	GGYRCC	1 cut(s)	260
AccBSI	CCGCTC	2 cut(s)	297, 728
AccI	GTMKAC	1 cut(s)	279
AccII	CGCG	3 cut(s)	66, 185, 284
AciI	CCGC	6 cut(s)	64, 91, 183, 297, 300, 726
AclWI	GGATC	3 cut(s)	688, 701, 748
AcoI	YGGCCR	1 cut(s)	609
AcsI	RAATTY	1 cut(s)	332
AcuI	CTGAAG	1 cut(s)	1245
AcyI	GRCGYC	3 cut(s)	171, 261, 324
AdeI	CACNNNGTG	1 cut(s)	142
AfaI	GTAC	2 cut(s)	999, 1275
AfiI	CCNNNNNNNGG	6 cut(s)	35, 590, 703, 704, 788, 1301
AflIII	ACRYGT	1 cut(s)	282
AgsI	TTSAA	5 cut(s)	352, 509, 651, 855, 919
AjiI	CACGTC	1 cut(s)	142
AjnI	CCWGG	2 cut(s)	528, 1123
AleI	CACNNNNGTG	1 cut(s)	93
AluBI	AGCT	4 cut(s)	368, 644, 862, 1284
AluI	AGCT	4 cut(s)	368, 644, 862, 1284
Alw21I	GWGCWC	2 cut(s)	342, 864
Alw26I	GTCTC	2 cut(s)	291, 542
AlwI	GGATC	3 cut(s)	688, 701, 748
AlwNI	CAGNNNCTG	1 cut(s)	1204
AoxI	GGCC	1 cut(s)	609
ApeKI	GCWGC	3 cut(s)	230, 272, 806
ApoI	RAATTY	1 cut(s)	332
Asp700I	GAANNNNTTC	2 cut(s)	207, 1078
AspLEI	GCGC	2 cut(s)	187, 263
AspS9I	GGNCC	2 cut(s)	244, 710
AsuHPI	GGTGA	3 cut(s)	103, 172, 1183
AvaII	GGWCC	2 cut(s)	244, 710
BalI	TGGCCA	1 cut(s)	611
BamHI	GGATCC	1 cut(s)	693
BanI	GGYRCC	1 cut(s)	260
BanII	GRGCYC	1 cut(s)	864
BbsI	GAAGAC	2 cut(s)	14, 200
Bbv12I	GWGCWC	2 cut(s)	342, 864
BbvI	GCAGC	3 cut(s)	217, 259, 818
BccI	CCATC	4 cut(s)	297, 350, 767, 970
BceAI	ACGGC	3 cut(s)	13, 218, 224
BciT130I	CCWGG	2 cut(s)	530, 1125
BclI	TGATCA	1 cut(s)	1240
BcoDI	GTCTC	2 cut(s)	291, 542
BfaI	CTAG	2 cut(s)	221, 815
BfmI	CTRYAG	1 cut(s)	804
BfoI	RGCGCY	1 cut(s)	264
BfuAI	ACCTGC	3 cut(s)	492, 581, 1076
BisI	GCNGC	6 cut(s)	64, 231, 273, 298, 726, 807
BlpI	GCTNAGC	1 cut(s)	1044
BlsI	GCNGC	6 cut(s)	65, 232, 274, 299, 727, 808
Bme1390I	CCNGG	2 cut(s)	530, 1125
Bme18I	GGWCC	2 cut(s)	244, 710
BmgBI	CACGTC	1 cut(s)	142
BmgT120I	GGNCC	2 cut(s)	244, 710
BmiI	GGNNCC	3 cut(s)	246, 262, 695
BmrFI	CCNGG	2 cut(s)	530, 1125
BmsI	GCATC	3 cut(s)	217, 787, 1223
BpiI	GAAGAC	2 cut(s)	14, 200
Bpu1102I	GCTNAGC	1 cut(s)	1044
BpuEI	CTTGAG	2 cut(s)	326, 566
BsaBI	GATNNNNATC	1 cut(s)	777
BsaHI	GRCGYC	3 cut(s)	171, 261, 324
BsaJI	CCNNGG	2 cut(s)	240, 327
BsaWI	WCCGGW	1 cut(s)	1186
BsaXI	ACNNNNNCTCC	2 cut(s)	813, 843
Bsc4I	CCNNNNNNNGG	6 cut(s)	35, 590, 703, 704, 788, 1301
Bse118I	RCCGGY	1 cut(s)	263
Bse1I	ACTGG	4 cut(s)	620, 986, 1209, 1313
Bse3DI	GCAATG	1 cut(s)	434
Bse8I	GATNNNNATC	1 cut(s)	777
BseBI	CCWGG	2 cut(s)	530, 1125
BseDI	CCNNGG	2 cut(s)	240, 327
BseGI	GGATG	6 cut(s)	20, 308, 778, 778, 889, 1195
BseJI	GATNNNNATC	1 cut(s)	777
BseLI	CCNNNNNNNGG	6 cut(s)	35, 590, 703, 704, 788, 1301
BseMI	GCAATG	1 cut(s)	434
BseMII	CTCAG	2 cut(s)	302, 1124
BseNI	ACTGG	4 cut(s)	620, 986, 1209, 1313
BseXI	GCAGC	3 cut(s)	217, 259, 818
BseYI	CCCAGC	1 cut(s)	572
BsgI	GTGCAG	1 cut(s)	1101
Bsh1236I	CGCG	3 cut(s)	66, 185, 284
BshFI	GGCC	1 cut(s)	611
BshNI	GGYRCC	1 cut(s)	260
BsiHKAI	GWGCWC	2 cut(s)	342, 864
BsiSI	CCGG	4 cut(s)	168, 258, 264, 1187
BslFI	GGGAC	1 cut(s)	37
BslI	CCNNNNNNNGG	6 cut(s)	35, 590, 703, 704, 788, 1301
BsmAI	GTCTC	2 cut(s)	291, 542
BsmBI	CGTCTC	1 cut(s)	291
BsmFI	GGGAC	1 cut(s)	37
BsmI	GAATGC	1 cut(s)	1069
BsnI	GGCC	1 cut(s)	611
Bsp1286I	GDGCHC	2 cut(s)	342, 864
Bsp143I	GATC	6 cut(s)	150, 175, 693, 740, 1100, 1240
Bsp1720I	GCTNAGC	1 cut(s)	1044
Bsp19I	CCATGG	1 cut(s)	327
BspACI	CCGC	6 cut(s)	64, 91, 183, 297, 300, 726
BspANI	GGCC	1 cut(s)	611
BspCNI	CTCAG	2 cut(s)	301, 1123
BspFNI	CGCG	3 cut(s)	66, 185, 284
BspHI	TCATGA	2 cut(s)	864, 933
BspLI	GGNNCC	3 cut(s)	246, 262, 695
BspMAI	CTGCAG	1 cut(s)	808
BspMI	ACCTGC	3 cut(s)	492, 581, 1076
BspPI	GGATC	3 cut(s)	688, 701, 748
BspQI	GCTCTTC	1 cut(s)	287
BspT107I	GGYRCC	1 cut(s)	260
BsrBI	CCGCTC	2 cut(s)	297, 728
BsrDI	GCAATG	1 cut(s)	434
BsrFI	RCCGGY	1 cut(s)	263
BsrI	ACTGG	4 cut(s)	620, 986, 1209, 1313
BssAI	RCCGGY	1 cut(s)	263
BssECI	CCNNGG	2 cut(s)	240, 327
BssMI	GATC	6 cut(s)	150, 175, 693, 740, 1100, 1240
BssNI	GRCGYC	3 cut(s)	171, 261, 324
BssT1I	CCWWGG	1 cut(s)	327
Bst2UI	CCWGG	2 cut(s)	530, 1125
Bst4CI	ACNGT	3 cut(s)	51, 392, 415
Bst6I	CTCTTC	2 cut(s)	287, 1221
BstACI	GRCGYC	3 cut(s)	171, 261, 324
BstAPI	GCANNNNNTGC	2 cut(s)	484, 1091
BstC8I	GCNNGC	4 cut(s)	265, 570, 730, 1116
BstDEI	CTNAG	4 cut(s)	288, 1001, 1044, 1110
BstDSI	CCRYGG	2 cut(s)	240, 327
BstF5I	GGATG	6 cut(s)	20, 308, 778, 778, 889, 1195
BstFNI	CGCG	3 cut(s)	66, 185, 284
BstH2I	RGCGCY	1 cut(s)	264
BstHHI	GCGC	2 cut(s)	187, 263
BstKTI	GATC	6 cut(s)	153, 178, 696, 743, 1103, 1243
BstMAI	GTCTC	2 cut(s)	291, 542
BstMBI	GATC	6 cut(s)	150, 175, 693, 740, 1100, 1240
BstNI	CCWGG	2 cut(s)	530, 1125
BstNSI	RCATGY	1 cut(s)	377
BstSCI	CCNGG	2 cut(s)	528, 1123
BstSFI	CTRYAG	1 cut(s)	804
BstUI	CGCG	3 cut(s)	66, 185, 284
BstV1I	GCAGC	3 cut(s)	217, 259, 818
BstV2I	GAAGAC	2 cut(s)	14, 200
BstX2I	RGATCY	1 cut(s)	693
BstXI	CCANNNNNNTGG	2 cut(s)	95, 792
BstYI	RGATCY	1 cut(s)	693
BsuRI	GGCC	1 cut(s)	611
BtgI	CCRYGG	2 cut(s)	240, 327
BtrI	CACGTC	1 cut(s)	142
BtsCI	GGATG	6 cut(s)	20, 308, 778, 778, 889, 1195
BtsI	GCAGTG	2 cut(s)	100, 801
BtsIMutI	CAGTG	3 cut(s)	100, 801, 1202
BveI	ACCTGC	3 cut(s)	492, 581, 1076
Cac8I	GCNNGC	4 cut(s)	265, 570, 730, 1116
CaiI	CAGNNNCTG	1 cut(s)	1204
CciI	TCATGA	2 cut(s)	864, 933
CfoI	GCGC	2 cut(s)	187, 263
Cfr10I	RCCGGY	1 cut(s)	263
Cfr13I	GGNCC	2 cut(s)	244, 710
CseI	GACGC	5 cut(s)	160, 273, 278, 290, 332
Csp6I	GTAC	2 cut(s)	998, 1274
CviAII	CATG	5 cut(s)	328, 374, 865, 934, 1288
CviQI	GTAC	2 cut(s)	998, 1274
DdeI	CTNAG	4 cut(s)	288, 1001, 1044, 1110
DinI	GGCGCC	1 cut(s)	262
DpnI	GATC	6 cut(s)	152, 177, 695, 742, 1102, 1242
DpnII	GATC	6 cut(s)	150, 175, 693, 740, 1100, 1240
DraIII	CACNNNGTG	1 cut(s)	142
DrdI	GACNNNNNNGTC	2 cut(s)	170, 275
DseDI	GACNNNNNNGTC	2 cut(s)	170, 275
EaeI	YGGCCR	1 cut(s)	609
Eam1104I	CTCTTC	2 cut(s)	287, 1221
EarI	CTCTTC	2 cut(s)	287, 1221
EciI	GGCGGA	1 cut(s)	315
Ecl136II	GAGCTC	1 cut(s)	862
Eco130I	CCWWGG	1 cut(s)	327
Eco24I	GRGCYC	1 cut(s)	864
Eco47I	GGWCC	2 cut(s)	244, 710
Eco53kI	GAGCTC	1 cut(s)	862
Eco57I	CTGAAG	1 cut(s)	1245
EcoICRI	GAGCTC	1 cut(s)	862
EcoRI	GAATTC	1 cut(s)	332
EcoRII	CCWGG	2 cut(s)	528, 1123
EcoT14I	CCWWGG	1 cut(s)	327
EcoT38I	GRGCYC	1 cut(s)	864
EgeI	GGCGCC	1 cut(s)	262
EheI	GGCGCC	1 cut(s)	262
ErhI	CCWWGG	1 cut(s)	327
Esp3I	CGTCTC	1 cut(s)	291
FaeI	CATG	5 cut(s)	331, 377, 868, 937, 1291
FalI	AAGNNNNNCTT	4 cut(s)	195, 227, 345, 377
FaqI	GGGAC	1 cut(s)	37
FatI	CATG	5 cut(s)	327, 373, 864, 933, 1287
FauNDI	CATATG	1 cut(s)	382
FbaI	TGATCA	1 cut(s)	1240
FblI	GTMKAC	1 cut(s)	279
Fnu4HI	GCNGC	6 cut(s)	64, 231, 273, 298, 726, 807
FokI	GGATG	6 cut(s)	7, 315, 765, 785, 896, 1202
FriOI	GRGCYC	1 cut(s)	864
Fsp4HI	GCNGC	6 cut(s)	64, 231, 273, 298, 726, 807
FspBI	CTAG	2 cut(s)	221, 815
GlaI	GCGC	2 cut(s)	186, 262
GluI	GCNGC	6 cut(s)	64, 231, 273, 298, 726, 807
GsaI	CCCAGC	1 cut(s)	576
HaeII	RGCGCY	1 cut(s)	264
HaeIII	GGCC	1 cut(s)	611
HapII	CCGG	4 cut(s)	168, 258, 264, 1187
HgaI	GACGC	5 cut(s)	160, 273, 278, 290, 332
HhaI	GCGC	2 cut(s)	187, 263
Hin1I	GRCGYC	3 cut(s)	171, 261, 324
Hin1II	CATG	5 cut(s)	331, 377, 868, 937, 1291
Hin6I	GCGC	2 cut(s)	185, 261
HinP1I	GCGC	2 cut(s)	185, 261
HincII	GTYRAC	2 cut(s)	280, 675
HindII	GTYRAC	2 cut(s)	280, 675
HinfI	GANTC	8 cut(s)	10, 105, 120, 164, 461, 1074, 1106, 1220
HpaII	CCGG	4 cut(s)	168, 258, 264, 1187
HphI	GGTGA	3 cut(s)	103, 172, 1183
Hpy166II	GTNNAC	6 cut(s)	244, 280, 599, 675, 987, 1174
Hpy188III	TCNNGA	6 cut(s)	343, 509, 625, 865, 934, 966
Hpy8I	GTNNAC	6 cut(s)	244, 280, 599, 675, 987, 1174
Hpy99I	CGWCG	6 cut(s)	143, 176, 239, 272, 284, 326
HpyAV	CCTTC	3 cut(s)	169, 197, 674
HpyCH4III	ACNGT	3 cut(s)	51, 392, 415
HpyCH4IV	ACGT	1 cut(s)	141
HpyCH4V	TGCA	8 cut(s)	373, 478, 487, 806, 1067, 1094, 1118, 1214
HpyF3I	CTNAG	4 cut(s)	288, 1001, 1044, 1110
HpySE526I	ACGT	1 cut(s)	141
Hsp92I	GRCGYC	3 cut(s)	171, 261, 324
Hsp92II	CATG	5 cut(s)	331, 377, 868, 937, 1291
HspAI	GCGC	2 cut(s)	185, 261
KasI	GGCGCC	1 cut(s)	260
KroI	GCCGGC	1 cut(s)	263
KroNI	GCCGGC	1 cut(s)	265
Ksp22I	TGATCA	1 cut(s)	1240
Kzo9I	GATC	6 cut(s)	150, 175, 693, 740, 1100, 1240
LguI	GCTCTTC	1 cut(s)	287
LmnI	GCTCC	2 cut(s)	859, 1289
Lsp1109I	GCAGC	3 cut(s)	217, 259, 818
LweI	GCATC	3 cut(s)	217, 787, 1223
MaeI	CTAG	2 cut(s)	221, 815
MaeII	ACGT	1 cut(s)	141
MaeIII	GTNAC	3 cut(s)	109, 430, 941
MalI	GATC	6 cut(s)	152, 177, 695, 742, 1102, 1242
MbiI	CCGCTC	2 cut(s)	297, 728
MboI	GATC	6 cut(s)	150, 175, 693, 740, 1100, 1240
MboII	GAAGA	5 cut(s)	19, 200, 304, 1163, 1238
MflI	RGATCY	1 cut(s)	693
MhlI	GDGCHC	2 cut(s)	342, 864
MlsI	TGGCCA	1 cut(s)	611
MluCI	AATT	6 cut(s)	332, 399, 845, 975, 1031, 1260
MluI	ACGCGT	1 cut(s)	282
MluNI	TGGCCA	1 cut(s)	611
Mly113I	GGCGCC	1 cut(s)	261
MlyI	GAGTC	3 cut(s)	4, 99, 158
MmeI	TCCRAC	2 cut(s)	345, 737
Mox20I	TGGCCA	1 cut(s)	611
MreI	CGCCGGCG	1 cut(s)	263
MroNI	GCCGGC	1 cut(s)	263
MroXI	GAANNNNTTC	2 cut(s)	207, 1078
MscI	TGGCCA	1 cut(s)	611
MseI	TTAA	4 cut(s)	423, 579, 1137, 1145
MslI	CAYNNNNRTG	1 cut(s)	93
Msp20I	TGGCCA	1 cut(s)	611
MspA1I	CMGCKG	1 cut(s)	368
MspI	CCGG	4 cut(s)	168, 258, 264, 1187
MspR9I	CCNGG	2 cut(s)	530, 1125
Mva1269I	GAATGC	1 cut(s)	1069
MvaI	CCWGG	2 cut(s)	530, 1125
MvnI	CGCG	3 cut(s)	66, 185, 284
NaeI	GCCGGC	1 cut(s)	265
NarI	GGCGCC	1 cut(s)	261
NcoI	CCATGG	1 cut(s)	327
NdeI	CATATG	1 cut(s)	382
NdeII	GATC	6 cut(s)	150, 175, 693, 740, 1100, 1240
NgoMIV	GCCGGC	1 cut(s)	263
NlaIII	CATG	5 cut(s)	331, 377, 868, 937, 1291
NlaIV	GGNNCC	3 cut(s)	246, 262, 695
NmeAIII	GCCGAG	1 cut(s)	221
NmuCI	GTSAC	2 cut(s)	109, 430
NspI	RCATGY	1 cut(s)	377
OliI	CACNNNNGTG	1 cut(s)	93
PagI	TCATGA	2 cut(s)	864, 933
PciSI	GCTCTTC	1 cut(s)	287
PcsI	WCGNNNNNNNCGW	3 cut(s)	168, 276, 1096
PctI	GAATGC	1 cut(s)	1069
PdiI	GCCGGC	1 cut(s)	265
PdmI	GAANNNNTTC	2 cut(s)	207, 1078
PfeI	GAWTC	5 cut(s)	120, 461, 1074, 1106, 1220
PkrI	GCNGC	6 cut(s)	65, 232, 274, 299, 727, 808
PleI	GAGTC	3 cut(s)	4, 99, 158
PluTI	GGCGCC	1 cut(s)	264
PpsI	GAGTC	3 cut(s)	4, 99, 158
Psp124BI	GAGCTC	1 cut(s)	864
Psp6I	CCWGG	2 cut(s)	528, 1123
PspFI	CCCAGC	1 cut(s)	572
PspGI	CCWGG	2 cut(s)	528, 1123
PspN4I	GGNNCC	3 cut(s)	246, 262, 695
PspPI	GGNCC	2 cut(s)	244, 710
PstI	CTGCAG	1 cut(s)	808
PstNI	CAGNNNCTG	1 cut(s)	1204
PsuI	RGATCY	1 cut(s)	693
PvuII	CAGCTG	1 cut(s)	368
RsaI	GTAC	2 cut(s)	999, 1275
RsaNI	GTAC	2 cut(s)	998, 1274
RseI	CAYNNNNRTG	1 cut(s)	93
SacI	GAGCTC	1 cut(s)	864
SalI	GTCGAC	1 cut(s)	278
SapI	GCTCTTC	1 cut(s)	287
SaqAI	TTAA	4 cut(s)	423, 579, 1137, 1145
SatI	GCNGC	6 cut(s)	64, 231, 273, 298, 726, 807
Sau3AI	GATC	6 cut(s)	150, 175, 693, 740, 1100, 1240
Sau96I	GGNCC	2 cut(s)	244, 710
SchI	GAGTC	3 cut(s)	4, 99, 158
ScrFI	CCNGG	2 cut(s)	530, 1125
SduI	GDGCHC	2 cut(s)	342, 864
SfaNI	GCATC	3 cut(s)	217, 787, 1223
SfcI	CTRYAG	1 cut(s)	804
SfoI	GGCGCC	1 cut(s)	262
SgrAI	CRCCGGYG	1 cut(s)	263
SinI	GGWCC	2 cut(s)	244, 710
SmiMI	CAYNNNNRTG	1 cut(s)	93
SmlI	CTYRAG	2 cut(s)	341, 545
SmoI	CTYRAG	2 cut(s)	341, 545
Sse9I	AATT	6 cut(s)	332, 399, 845, 975, 1031, 1260
SsiI	CCGC	6 cut(s)	64, 91, 183, 297, 300, 726
SspDI	GGCGCC	1 cut(s)	260
SspMI	CTAG	2 cut(s)	221, 815
SstI	GAGCTC	1 cut(s)	864
StyD4I	CCNGG	2 cut(s)	528, 1123
StyI	CCWWGG	1 cut(s)	327
TaaI	ACNGT	3 cut(s)	51, 392, 415
TaiI	ACGT	1 cut(s)	144
TaqI	TCGA	3 cut(s)	162, 174, 279
TasI	AATT	6 cut(s)	332, 399, 845, 975, 1031, 1260
TatI	WGTACW	1 cut(s)	997
TauI	GCSGC	3 cut(s)	66, 300, 728
TfiI	GAWTC	5 cut(s)	120, 461, 1074, 1106, 1220
Tru1I	TTAA	4 cut(s)	423, 579, 1137, 1145
Tru9I	TTAA	4 cut(s)	423, 579, 1137, 1145
TscAI	CASTG	3 cut(s)	100, 808, 1209
TseFI	GTSAC	2 cut(s)	109, 430
TseI	GCWGC	3 cut(s)	230, 272, 806
Tsp45I	GTSAC	2 cut(s)	109, 430
TspDTI	ATGAA	3 cut(s)	22, 304, 881
TspGWI	ACGGA	2 cut(s)	896, 946
TspRI	CASTG	3 cut(s)	100, 808, 1209
VpaK11BI	GGWCC	2 cut(s)	244, 710
XapI	RAATTY	1 cut(s)	332
XceI	RCATGY	1 cut(s)	377
XcmI	CCANNNNNNNNNTGG	1 cut(s)	789
XmiI	GTMKAC	1 cut(s)	279
XmnI	GAANNNNTTC	2 cut(s)	207, 1078
XspI	CTAG	2 cut(s)	221, 815

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.