No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G28410 |
| fragaria_vesca | FvH4_3g32270 |
| malus_domestica | MD03G1117800.v1.1 MD11G1136100.v1.1 |
| prunus_persica | Prupe.6G101500_v2.0.a1 |
| rosa_chinensis | RchiOBHm_Chr5g0059071 |
| rosa_laevigata | RLG00000035278 |
| rosa_multiflora | Rmu_sc0002983.1_g000041 Rmu_sc0034401.1_g000001 |
| rosa_roxburghii | Rroxscaffold_1G00021340 |
| rosa_rugosa | Rorug05G0320200 |
| rosa_samantha | Rh5BG397100 Rh5CG420800 Rh5DG413200 |
| rosa_wichuraiana | Rw5G036300 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 2 cut(s) | 267, 309 |
| AfaI | GTAC | 1 cut(s) | 271 |
| AgsI | TTSAA | 3 cut(s) | 9, 139, 398 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 97, 129 |
| AluBI | AGCT | 2 cut(s) | 212, 284 |
| AluI | AGCT | 2 cut(s) | 212, 284 |
| AoxI | GGCC | 1 cut(s) | 85 |
| ApeKI | GCWGC | 2 cut(s) | 209, 284 |
| AsuHPI | GGTGA | 2 cut(s) | 108, 186 |
| BanII | GRGCYC | 1 cut(s) | 79 |
| BauI | CACGAG | 1 cut(s) | 236 |
| BbvI | GCAGC | 2 cut(s) | 221, 271 |
| BccI | CCATC | 1 cut(s) | 26 |
| BceAI | ACGGC | 2 cut(s) | 100, 123 |
| BciVI | GTATCC | 1 cut(s) | 269 |
| BfuI | GTATCC | 1 cut(s) | 269 |
| BisI | GCNGC | 2 cut(s) | 210, 285 |
| BlsI | GCNGC | 2 cut(s) | 211, 286 |
| BpuEI | CTTGAG | 1 cut(s) | 198 |
| BsaJI | CCNNGG | 1 cut(s) | 82 |
| Bse1I | ACTGG | 1 cut(s) | 186 |
| Bse3DI | GCAATG | 2 cut(s) | 197, 342 |
| BseDI | CCNNGG | 1 cut(s) | 82 |
| BseGI | GGATG | 1 cut(s) | 182 |
| BseMI | GCAATG | 2 cut(s) | 197, 342 |
| BseNI | ACTGG | 1 cut(s) | 186 |
| BseXI | GCAGC | 2 cut(s) | 221, 271 |
| BseYI | CCCAGC | 1 cut(s) | 287 |
| BshFI | GGCC | 1 cut(s) | 87 |
| BsnI | GGCC | 1 cut(s) | 87 |
| Bsp1286I | GDGCHC | 1 cut(s) | 79 |
| Bsp143I | GATC | 1 cut(s) | 368 |
| BspACI | CCGC | 2 cut(s) | 267, 309 |
| BspANI | GGCC | 1 cut(s) | 87 |
| BsrDI | GCAATG | 2 cut(s) | 197, 342 |
| BsrI | ACTGG | 1 cut(s) | 186 |
| BssECI | CCNNGG | 1 cut(s) | 82 |
| BssMI | GATC | 1 cut(s) | 368 |
| BssSI | CACGAG | 1 cut(s) | 236 |
| Bst2BI | CACGAG | 1 cut(s) | 236 |
| Bst4CI | ACNGT | 2 cut(s) | 120, 394 |
| Bst6I | CTCTTC | 2 cut(s) | 32, 40 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 306 |
| BstC8I | GCNNGC | 2 cut(s) | 222, 298 |
| BstDSI | CCRYGG | 1 cut(s) | 82 |
| BstF5I | GGATG | 1 cut(s) | 182 |
| BstKTI | GATC | 1 cut(s) | 371 |
| BstMBI | GATC | 1 cut(s) | 368 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 230, 293, 306, 341 |
| BstNSI | RCATGY | 1 cut(s) | 206 |
| BstV1I | GCAGC | 2 cut(s) | 221, 271 |
| BsuI | GTATCC | 1 cut(s) | 269 |
| BsuRI | GGCC | 1 cut(s) | 87 |
| BtgI | CCRYGG | 1 cut(s) | 82 |
| BtsCI | GGATG | 1 cut(s) | 182 |
| Cac8I | GCNNGC | 2 cut(s) | 222, 298 |
| Csp6I | GTAC | 1 cut(s) | 270 |
| CviAII | CATG | 3 cut(s) | 174, 203, 350 |
| CviJI | RGCY | 6 cut(s) | 77, 87, 212, 284, 344, 386 |
| CviKI_1 | RGCY | 6 cut(s) | 77, 87, 212, 284, 344, 386 |
| CviQI | GTAC | 1 cut(s) | 270 |
| DpnI | GATC | 1 cut(s) | 370 |
| DpnII | GATC | 1 cut(s) | 368 |
| Eam1104I | CTCTTC | 2 cut(s) | 32, 40 |
| EarI | CTCTTC | 2 cut(s) | 32, 40 |
| Eco24I | GRGCYC | 1 cut(s) | 79 |
| EcoT38I | GRGCYC | 1 cut(s) | 79 |
| FaeI | CATG | 3 cut(s) | 177, 206, 353 |
| FaiI | YATR | 7 cut(s) | 129, 175, 204, 351, 375, 377, 409 |
| FatI | CATG | 3 cut(s) | 173, 202, 349 |
| FauNDI | CATATG | 1 cut(s) | 375 |
| Fnu4HI | GCNGC | 2 cut(s) | 210, 285 |
| FokI | GGATG | 1 cut(s) | 169 |
| FriOI | GRGCYC | 1 cut(s) | 79 |
| Fsp4HI | GCNGC | 2 cut(s) | 210, 285 |
| GluI | GCNGC | 2 cut(s) | 210, 285 |
| GsaI | CCCAGC | 1 cut(s) | 291 |
| HaeIII | GGCC | 1 cut(s) | 87 |
| Hin1II | CATG | 3 cut(s) | 177, 206, 353 |
| HinfI | GANTC | 1 cut(s) | 379 |
| HphI | GGTGA | 2 cut(s) | 108, 186 |
| Hpy188I | TCNGA | 1 cut(s) | 42 |
| Hpy99I | CGWCG | 1 cut(s) | 151 |
| HpyAV | CCTTC | 2 cut(s) | 15, 56 |
| HpyCH4III | ACNGT | 2 cut(s) | 120, 394 |
| HpyCH4IV | ACGT | 1 cut(s) | 146 |
| HpyCH4V | TGCA | 3 cut(s) | 202, 220, 323 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 230, 293, 306, 341 |
| HpySE526I | ACGT | 1 cut(s) | 146 |
| Hsp92II | CATG | 3 cut(s) | 177, 206, 353 |
| Kzo9I | GATC | 1 cut(s) | 368 |
| LmnI | GCTCC | 1 cut(s) | 281 |
| LpnPI | CCDG | 6 cut(s) | 106, 199, 258, 273, 282, 317 |
| Lsp1109I | GCAGC | 2 cut(s) | 221, 271 |
| MaeII | ACGT | 1 cut(s) | 146 |
| MaeIII | GTNAC | 3 cut(s) | 120, 178, 358 |
| MalI | GATC | 1 cut(s) | 370 |
| MboI | GATC | 1 cut(s) | 368 |
| MboII | GAAGA | 4 cut(s) | 19, 22, 27, 127 |
| MhlI | GDGCHC | 1 cut(s) | 79 |
| MluCI | AATT | 1 cut(s) | 111 |
| MlyI | GAGTC | 1 cut(s) | 388 |
| MmeI | TCCRAC | 1 cut(s) | 167 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 230, 293, 306, 341 |
| NdeI | CATATG | 1 cut(s) | 375 |
| NdeII | GATC | 1 cut(s) | 368 |
| NlaIII | CATG | 3 cut(s) | 177, 206, 353 |
| NmuCI | GTSAC | 2 cut(s) | 120, 358 |
| NspI | RCATGY | 1 cut(s) | 206 |
| PkrI | GCNGC | 2 cut(s) | 211, 286 |
| PleI | GAGTC | 1 cut(s) | 387 |
| PpsI | GAGTC | 1 cut(s) | 387 |
| PspFI | CCCAGC | 1 cut(s) | 287 |
| RsaI | GTAC | 1 cut(s) | 271 |
| RsaNI | GTAC | 1 cut(s) | 270 |
| SatI | GCNGC | 2 cut(s) | 210, 285 |
| Sau3AI | GATC | 1 cut(s) | 368 |
| SchI | GAGTC | 1 cut(s) | 388 |
| SduI | GDGCHC | 1 cut(s) | 79 |
| SetI | ASST | 3 cut(s) | 149, 214, 286 |
| SmlI | CTYRAG | 1 cut(s) | 213 |
| SmoI | CTYRAG | 1 cut(s) | 213 |
| Sse9I | AATT | 1 cut(s) | 111 |
| SsiI | CCGC | 2 cut(s) | 267, 309 |
| TaaI | ACNGT | 2 cut(s) | 120, 394 |
| TaiI | ACGT | 1 cut(s) | 149 |
| TaqI | TCGA | 1 cut(s) | 382 |
| TasI | AATT | 1 cut(s) | 111 |
| TseFI | GTSAC | 2 cut(s) | 120, 358 |
| TseI | GCWGC | 2 cut(s) | 209, 284 |
| Tsp45I | GTSAC | 2 cut(s) | 120, 358 |
| TspGWI | ACGGA | 2 cut(s) | 43, 294 |
| XceI | RCATGY | 1 cut(s) | 206 |