No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G28410 |
| fragaria_vesca | FvH4_3g32270 |
| malus_domestica | MD03G1117800.v1.1 MD11G1136100.v1.1 |
| prunus_persica | Prupe.6G101500_v2.0.a1 |
| rosa_chinensis | RchiOBHm_Chr5g0059071 |
| rosa_laevigata | RLG00000035278 |
| rosa_multiflora | Rmu_sc0002983.1_g000041 Rmu_sc0034401.1_g000001 |
| rosa_roxburghii | Rroxscaffold_1G00021340 |
| rosa_rugosa | Rorug05G0320200 |
| rosa_samantha | Rh5BG397100 Rh5CG420800 Rh5DG413200 |
| rosa_wichuraiana | Rw5G036300 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 364 |
| AcuI | CTGAAG | 1 cut(s) | 249 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 97, 129 |
| AluBI | AGCT | 2 cut(s) | 77, 284 |
| AluI | AGCT | 2 cut(s) | 77, 284 |
| Alw21I | GWGCWC | 2 cut(s) | 67, 79 |
| Ama87I | CYCGRG | 1 cut(s) | 381 |
| ApeKI | GCWGC | 1 cut(s) | 209 |
| AsuHPI | GGTGA | 1 cut(s) | 34 |
| AvaI | CYCGRG | 1 cut(s) | 381 |
| BanII | GRGCYC | 1 cut(s) | 79 |
| Bbv12I | GWGCWC | 2 cut(s) | 67, 79 |
| BbvI | GCAGC | 1 cut(s) | 221 |
| BccI | CCATC | 1 cut(s) | 331 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 289, 323 |
| BfaI | CTAG | 1 cut(s) | 89 |
| BisI | GCNGC | 1 cut(s) | 210 |
| BlsI | GCNGC | 1 cut(s) | 211 |
| BmeT110I | CYCGRG | 1 cut(s) | 381 |
| Bpu10I | CCTNAGC | 1 cut(s) | 66 |
| Bse1I | ACTGG | 1 cut(s) | 158 |
| Bse3DI | GCAATG | 3 cut(s) | 54, 197, 291 |
| BseGI | GGATG | 1 cut(s) | 139 |
| BseMI | GCAATG | 3 cut(s) | 54, 197, 291 |
| BseMII | CTCAG | 1 cut(s) | 80 |
| BseNI | ACTGG | 1 cut(s) | 158 |
| BseRI | GAGGAG | 1 cut(s) | 69 |
| BseXI | GCAGC | 1 cut(s) | 221 |
| BsiHKAI | GWGCWC | 2 cut(s) | 67, 79 |
| BsiHKCI | CYCGRG | 1 cut(s) | 381 |
| BsoBI | CYCGRG | 1 cut(s) | 381 |
| Bsp1286I | GDGCHC | 2 cut(s) | 67, 79 |
| BspACI | CCGC | 1 cut(s) | 364 |
| BspCNI | CTCAG | 1 cut(s) | 79 |
| BspHI | TCATGA | 1 cut(s) | 235 |
| BsrDI | GCAATG | 3 cut(s) | 54, 197, 291 |
| BsrI | ACTGG | 1 cut(s) | 158 |
| Bst4CI | ACNGT | 1 cut(s) | 394 |
| BstC8I | GCNNGC | 3 cut(s) | 194, 298, 364 |
| BstDEI | CTNAG | 1 cut(s) | 66 |
| BstF5I | GGATG | 1 cut(s) | 139 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 297 |
| BstV1I | GCAGC | 1 cut(s) | 221 |
| BtgZI | GCGATG | 1 cut(s) | 350 |
| BtsCI | GGATG | 1 cut(s) | 139 |
| Cac8I | GCNNGC | 3 cut(s) | 194, 298, 364 |
| CciI | TCATGA | 1 cut(s) | 235 |
| CviAII | CATG | 3 cut(s) | 83, 215, 236 |
| CviJI | RGCY | 8 cut(s) | 5, 77, 92, 157, 212, 255, 284, 386 |
| CviKI_1 | RGCY | 8 cut(s) | 5, 77, 92, 157, 212, 255, 284, 386 |
| DdeI | CTNAG | 1 cut(s) | 66 |
| Ecl136II | GAGCTC | 1 cut(s) | 77 |
| Eco24I | GRGCYC | 1 cut(s) | 79 |
| Eco53kI | GAGCTC | 1 cut(s) | 77 |
| Eco57I | CTGAAG | 1 cut(s) | 249 |
| Eco88I | CYCGRG | 1 cut(s) | 381 |
| EcoICRI | GAGCTC | 1 cut(s) | 77 |
| EcoT38I | GRGCYC | 1 cut(s) | 79 |
| FaeI | CATG | 3 cut(s) | 86, 218, 239 |
| FaiI | YATR | 6 cut(s) | 84, 129, 216, 237, 351, 409 |
| FatI | CATG | 3 cut(s) | 82, 214, 235 |
| FauI | CCCGC | 1 cut(s) | 371 |
| Fnu4HI | GCNGC | 1 cut(s) | 210 |
| FokI | GGATG | 1 cut(s) | 126 |
| FriOI | GRGCYC | 1 cut(s) | 79 |
| Fsp4HI | GCNGC | 1 cut(s) | 210 |
| FspBI | CTAG | 1 cut(s) | 89 |
| GluI | GCNGC | 1 cut(s) | 210 |
| Hin1II | CATG | 3 cut(s) | 86, 218, 239 |
| HinfI | GANTC | 1 cut(s) | 379 |
| HphI | GGTGA | 1 cut(s) | 34 |
| Hpy166II | GTNNAC | 1 cut(s) | 346 |
| Hpy188III | TCNNGA | 2 cut(s) | 68, 236 |
| Hpy8I | GTNNAC | 1 cut(s) | 346 |
| HpyAV | CCTTC | 2 cut(s) | 56, 224 |
| HpyCH4III | ACNGT | 1 cut(s) | 394 |
| HpyCH4V | TGCA | 2 cut(s) | 209, 296 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 297 |
| HpyF3I | CTNAG | 1 cut(s) | 66 |
| Hsp92II | CATG | 3 cut(s) | 86, 218, 239 |
| LmnI | GCTCC | 2 cut(s) | 82, 281 |
| LpnPI | CCDG | 7 cut(s) | 45, 53, 171, 237, 270, 282, 317 |
| Lsp1109I | GCAGC | 1 cut(s) | 221 |
| MaeI | CTAG | 1 cut(s) | 89 |
| MboII | GAAGA | 1 cut(s) | 27 |
| MhlI | GDGCHC | 2 cut(s) | 67, 79 |
| MlyI | GAGTC | 1 cut(s) | 373 |
| MmeI | TCCRAC | 1 cut(s) | 259 |
| MnlI | CCTC | 1 cut(s) | 90 |
| MseI | TTAA | 1 cut(s) | 396 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 297 |
| NlaIII | CATG | 3 cut(s) | 86, 218, 239 |
| PagI | TCATGA | 1 cut(s) | 235 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 122 |
| PkrI | GCNGC | 1 cut(s) | 211 |
| PleI | GAGTC | 1 cut(s) | 373 |
| PpsI | GAGTC | 1 cut(s) | 373 |
| Psp124BI | GAGCTC | 1 cut(s) | 79 |
| SacI | GAGCTC | 1 cut(s) | 79 |
| SaqAI | TTAA | 1 cut(s) | 396 |
| SatI | GCNGC | 1 cut(s) | 210 |
| SchI | GAGTC | 1 cut(s) | 373 |
| SduI | GDGCHC | 2 cut(s) | 67, 79 |
| SetI | ASST | 4 cut(s) | 79, 235, 286, 403 |
| SsiI | CCGC | 1 cut(s) | 364 |
| SspMI | CTAG | 1 cut(s) | 89 |
| SstI | GAGCTC | 1 cut(s) | 79 |
| TaaI | ACNGT | 1 cut(s) | 394 |
| TaqI | TCGA | 1 cut(s) | 219 |
| Tru1I | TTAA | 1 cut(s) | 396 |
| Tru9I | TTAA | 1 cut(s) | 396 |
| TseI | GCWGC | 1 cut(s) | 209 |
| TspDTI | ATGAA | 1 cut(s) | 128 |
| XspI | CTAG | 1 cut(s) | 89 |