Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr11

Orthogroup ID

OG0014312

Physical Location & Seq

Genomic Coordinates Reverse (-)

14122757 .. 14128774

Gene Structure 6018 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD11G1149200.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1638 bp

ATGGCATTTTCTCTATCTTCCTTTGCATCTCCTACAATCTTCACACTATCATCGCCGCCATCGCCACCCGCCAGATCTCTCAAGACACCCTCTTTCTTGATCTCCACCAAAAACCCAAATCGTAACTTACCAGGCAGAGCGAAAAATCTACCTCCTCTGAGAGTAGCTGCGCCTGCATCGCCGCCGCCACAAACCGCTGACCCAGAAGGACAGAGGGAACCGGACGGCGAAGATTACGGAGCTGAGGACGAGATTGAAGACGCGACATCGACGAGCAAGTTCAATTGGAGGGATCATTGGTACCCAGTTTCTTTGATTGAAGATTTGGACCCTCGGTTGCCGACCCCATTTCAGCTTCTGGGTCGAGACCTTGCTATCTGGTACGATGGTGAATCGTGGGTCGCTTTCGATGACAGATGCCCTCATCGCCTCGCCCCCTTATCTGAAGGACGGATTGATGAAGGCGGAAACTTGCAGTGTTCATACCATGGATGGTCATTTGATGGGTGTGGATCATGTGTTAAGATTCCTCAAGCTTCATCTGAAGGCCCTGAATCTCGTGCTGTTCGGTCTCCAAGAGCATGCGCTACGAGGTTTCCTACGCTGGTGTCTCAAGGCCTGCTCTTTGTTTGGCCGGATGAGAATGGTTGGGAAAGAGCTAATGCCACCAAGCCTACCATGCTACCTGATGAATTTAGTAAACCTGAGTTTTCGTCAGTGACAATCCAGCGTGATCTGTTCTATGGCTATGATACCCTCATGGAAAATGTCTCTGATCCTTCCCACATTGACTTCGCTCATCACAAGGTCACCGGAAGGAGAGATAGAGCCAAACCTTTGCCATTTAAACTCGAGGATAGTGGTCCTTGGGGTTTTTCTGGAGCAAATGAAGGCAACCCACGGATTACTGCTGAGTTTATAGCACCTTGCTATTATTTGAATAAAATAGAGATTGACACAAAGCTTCCAGTAGTTGGAGATCAAAAATGGGTTATATGGATTTGCTCCTTCAACGTTCCAATGGCACCAGGGAAGACTCGCTCTATTGTATGTAGTGCTCGAAACTTCTTCCAGTTTAGCATGCCAGGGCCCGCTTGGTGGCAGGTGGTTCCTAGATGGCAAGAGCATTGGACTTCAAATAAGGTTTATGACGGAGACATGATTGTCCTTCAGGGCCAAGAGAAGGTCTTTCATGCCAAATCCAAGGATGAATCTGGTGATGTTAATCAGCAGTACACAAAAATCACATTTACTCCGACACAAGCAGATCGTCTTGTCTTGGCATTTCGAAACTGGCTGAGGCGGCATGGCAACAGCCAACCCGAGTGGTTTGGTACTTGTGACCAACAACCCTTACCGTCAATGGTTTTATCAAAACGTCAGATGCTGGATAGATTCGAGCAGCACACCCTCAAATGCTCCTCGTGTAAGAAAGCTTATACAGCATTCCAGACATGGCAGAAGCTGCTAGTAGGGGCAACCGTTGTTTTCTGTGCATCAACCGGGATTCCTTCGGATCTGCAGCTACGGATCATTTTGGCAGGTTTTGCGCTTCTGAGTGCTGGCTTGGCTTACGCTTTGCATGAACTCGAAAAGAATTTCGTGTTTGTAGATTATGTACATGCTGACATTAATTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0002376 GO:0003006 GO:0003674 GO:0003824 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006725 GO:0006778 GO:0006787 GO:0006807 GO:0006950 GO:0006952 GO:0006955 GO:0007275 GO:0008150 GO:0008152 GO:0008219 GO:0009056 GO:0009507 GO:0009526 GO:0009528 GO:0009534 GO:0009536 GO:0009579 GO:0009605 GO:0009607 GO:0009617 GO:0009706 GO:0009791 GO:0009814 GO:0009816 GO:0009908 GO:0009941 GO:0009987 GO:0010154 GO:0015994 GO:0015996 GO:0016020 GO:0016491 GO:0016730 GO:0019439 GO:0019866 GO:0022414 GO:0031090 GO:0031967 GO:0031969 GO:0031975 GO:0031976 GO:0031984 GO:0032441 GO:0032501 GO:0032502 GO:0033013 GO:0033015 GO:0034641 GO:0042170 GO:0042440 GO:0042742 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044248 GO:0044270 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0045087 GO:0046149 GO:0046483 GO:0046700 GO:0048037 GO:0048367 GO:0048608 GO:0048731 GO:0048856 GO:0050896 GO:0051186 GO:0051187 GO:0051536 GO:0051540 GO:0051704 GO:0051707 GO:0055114 GO:0061458 GO:0071704 GO:0090567 GO:0098542 GO:1901360 GO:1901361 GO:1901564 GO:1901565 GO:1901575

KEGG Pathways

Metabolic & Signaling

ko00860 ko01110 map00860 map01110

Pfam Domains

Protein Families

PaO Rieske

Protein Analysis

546

Amino Acids

61.3

Weight (kDa)

6.1

Isoelectric Point (pI)

46.84

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Rieske	PF00355	99 - 180	7e-24	Rieske [2Fe-2S] domain
PaO	PF08417	306 - 401	1.5e-18	Pheophorbide a oxygenase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0014312)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G44880
fragaria_vesca	FvH4_3g30560 FvH4_3g30560 FvH4_3g30560
malus_domestica	MD11G1149200.v1.1
prunus_persica	Prupe.6G113600_v2.0.a1
pyrus_communis	pycom11g12210
rosa_chinensis	RchiOBHm_Chr5g0056561
rosa_laevigata	RLG00000035105
rosa_multiflora	Rmu_sc0000366.1_g000002
rosa_roxburghii	Rroxscaffold_1G00023780
rosa_rugosa	Rorug05G0300800 Rorug05G0300900
rosa_samantha	Rh5BG382300 Rh5CG405500 Rh5DG395300
rosa_wichuraiana	Rw5G034770

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1093
AasI	GACNNNNNNGTC	1 cut(s)	1163
Acc36I	ACCTGC	2 cut(s)	1093, 1532
Acc65I	GGTACC	1 cut(s)	300
AccB1I	GGYRCC	2 cut(s)	300, 1024
AccB7I	CCANNNNNTGG	1 cut(s)	974
AccII	CGCG	1 cut(s)	263
AciI	CCGC	8 cut(s)	56, 69, 182, 185, 195, 465, 1092, 1303
AclI	AACGTT	1 cut(s)	1014
AclWI	GGATC	5 cut(s)	300, 520, 770, 1524, 1538
AcoI	YGGCCR	1 cut(s)	632
AcsI	RAATTY	2 cut(s)	692, 1597
AcuI	CTGAAG	3 cut(s)	465, 564, 1154
AfaI	GTAC	5 cut(s)	302, 383, 1235, 1336, 1620
AfiI	CCNNNNNNNGG	3 cut(s)	974, 1098, 1183
AgsI	TTSAA	6 cut(s)	257, 283, 320, 940, 1012, 1137
AjnI	CCWGG	3 cut(s)	130, 1027, 1084
AluBI	AGCT	9 cut(s)	167, 242, 355, 536, 659, 964, 1436, 1465, 1525
AluI	AGCT	9 cut(s)	167, 242, 355, 536, 659, 964, 1436, 1465, 1525
Alw21I	GWGCWC	1 cut(s)	1060
Alw26I	GTCTC	5 cut(s)	360, 576, 615, 775, 1149
AlwI	GGATC	5 cut(s)	300, 520, 770, 1524, 1538
AlwNI	CAGNNNCTG	3 cut(s)	358, 1387, 1465
Ama87I	CYCGRG	2 cut(s)	851, 1322
AoxI	GGCC	5 cut(s)	547, 616, 632, 1088, 1174
ApaI	GGGCCC	1 cut(s)	1092
ApeKI	GCWGC	4 cut(s)	167, 1402, 1465, 1522
ApoI	RAATTY	2 cut(s)	692, 1597
AseI	ATTAAT	1 cut(s)	1632
Asp718I	GGTACC	1 cut(s)	300
AspLEI	GCGC	3 cut(s)	172, 587, 1552
AspS9I	GGNCC	6 cut(s)	328, 548, 863, 1088, 1089, 1174
AsuC2I	CCSGG	1 cut(s)	1504
AsuHPI	GGTGA	3 cut(s)	401, 802, 1229
AsuII	TTCGAA	1 cut(s)	1288
AvaI	CYCGRG	2 cut(s)	851, 1322
AvaII	GGWCC	2 cut(s)	328, 863
BaeGI	GKGCMC	1 cut(s)	1092
BaeI	ACNNNNGTAYC	2 cut(s)	373, 406
BanI	GGYRCC	2 cut(s)	300, 1024
BanII	GRGCYC	1 cut(s)	1092
BauI	CACGAG	2 cut(s)	558, 1423
BbsI	GAAGAC	2 cut(s)	264, 1040
Bbv12I	GWGCWC	1 cut(s)	1060
BbvCI	CCTCAGC	2 cut(s)	243, 1298
BbvI	GCAGC	4 cut(s)	154, 1414, 1452, 1534
BccI	CCATC	5 cut(s)	67, 380, 486, 497, 1110
BceAI	ACGGC	1 cut(s)	241
BciT130I	CCWGG	3 cut(s)	132, 1029, 1086
BcnI	CCSGG	1 cut(s)	1504
BcoDI	GTCTC	5 cut(s)	360, 576, 615, 775, 1149
BfaI	CTAG	2 cut(s)	1113, 1469
BfmI	CTRYAG	1 cut(s)	1520
BfuAI	ACCTGC	2 cut(s)	1093, 1532
BglII	AGATCT	1 cut(s)	74
BisI	GCNGC	8 cut(s)	56, 168, 182, 185, 1304, 1403, 1466, 1523
BlsI	GCNGC	8 cut(s)	57, 169, 183, 186, 1305, 1404, 1467, 1524
Bme1390I	CCNGG	4 cut(s)	132, 1029, 1086, 1504
Bme18I	GGWCC	2 cut(s)	328, 863
BmeT110I	CYCGRG	2 cut(s)	851, 1322
BmgT120I	GGNCC	6 cut(s)	328, 548, 863, 1088, 1089, 1174
BmiI	GGNNCC	6 cut(s)	219, 302, 330, 1026, 1090, 1110
BmrFI	CCNGG	4 cut(s)	132, 1029, 1086, 1504
BmrI	ACTGGG	1 cut(s)	299
BmsI	GCATC	5 cut(s)	35, 185, 407, 1374, 1505
BmuI	ACTGGG	1 cut(s)	299
BpiI	GAAGAC	2 cut(s)	264, 1040
BpmI	CTGGAG	1 cut(s)	900
Bpu10I	CCTNAGC	2 cut(s)	243, 1298
Bpu14I	TTCGAA	1 cut(s)	1288
BpuEI	CTTGAG	3 cut(s)	65, 516, 597
BpuMI	CCSGG	1 cut(s)	1504
BsaBI	GATNNNNATC	1 cut(s)	1224
BsaI	GGTCTC	2 cut(s)	360, 576
BsaJI	CCNNGG	7 cut(s)	332, 487, 866, 899, 1028, 1085, 1203
BsaWI	WCCGGW	2 cut(s)	220, 812
BsaXI	ACNNNNNCTCC	2 cut(s)	1237, 1267
Bsc4I	CCNNNNNNNGG	3 cut(s)	974, 1098, 1183
Bse1I	ACTGG	4 cut(s)	305, 968, 1072, 1298
Bse8I	GATNNNNATC	1 cut(s)	1224
BseBI	CCWGG	3 cut(s)	132, 1029, 1086
BseDI	CCNNGG	7 cut(s)	332, 487, 866, 899, 1028, 1085, 1203
BseGI	GGATG	3 cut(s)	497, 643, 1213
BseJI	GATNNNNATC	1 cut(s)	1224
BseLI	CCNNNNNNNGG	3 cut(s)	974, 1098, 1183
BseMII	CTCAG	6 cut(s)	149, 234, 696, 903, 1289, 1547
BseNI	ACTGG	4 cut(s)	305, 968, 1072, 1298
BseRI	GAGGAG	2 cut(s)	144, 1411
BseSI	GKGCMC	1 cut(s)	1092
BseXI	GCAGC	4 cut(s)	154, 1414, 1452, 1534
Bsh1236I	CGCG	1 cut(s)	263
BshFI	GGCC	5 cut(s)	549, 618, 634, 1090, 1176
BshNI	GGYRCC	2 cut(s)	300, 1024
BsiHKAI	GWGCWC	1 cut(s)	1060
BsiHKCI	CYCGRG	2 cut(s)	851, 1322
BsiSI	CCGG	4 cut(s)	221, 635, 813, 1503
BslI	CCNNNNNNNGG	3 cut(s)	974, 1098, 1183
BsmAI	GTCTC	5 cut(s)	360, 576, 615, 775, 1149
BsmI	GAATGC	1 cut(s)	1445
BsnI	GGCC	5 cut(s)	549, 618, 634, 1090, 1176
Bso31I	GGTCTC	2 cut(s)	360, 576
BsoBI	CYCGRG	2 cut(s)	851, 1322
Bsp119I	TTCGAA	1 cut(s)	1288
Bsp120I	GGGCCC	1 cut(s)	1088
Bsp1286I	GDGCHC	2 cut(s)	1060, 1092
Bsp1407I	TGTACA	1 cut(s)	1618
Bsp19I	CCATGG	1 cut(s)	487
BspACI	CCGC	8 cut(s)	56, 69, 182, 185, 195, 465, 1092, 1303
BspANI	GGCC	5 cut(s)	549, 618, 634, 1090, 1176
BspCNI	CTCAG	6 cut(s)	150, 235, 697, 904, 1290, 1548
BspFNI	CGCG	1 cut(s)	263
BspLI	GGNNCC	6 cut(s)	219, 302, 330, 1026, 1090, 1110
BspMAI	CTGCAG	1 cut(s)	1524
BspMI	ACCTGC	2 cut(s)	1093, 1532
BspPI	GGATC	5 cut(s)	300, 520, 770, 1524, 1538
BspT104I	TTCGAA	1 cut(s)	1288
BspT107I	GGYRCC	2 cut(s)	300, 1024
BspTNI	GGTCTC	2 cut(s)	360, 576
BsrGI	TGTACA	1 cut(s)	1618
BsrI	ACTGG	4 cut(s)	305, 968, 1072, 1298
BssECI	CCNNGG	7 cut(s)	332, 487, 866, 899, 1028, 1085, 1203
BssSI	CACGAG	2 cut(s)	558, 1423
BssT1I	CCWWGG	3 cut(s)	487, 866, 1203
Bst2BI	CACGAG	2 cut(s)	558, 1423
Bst2UI	CCWGG	3 cut(s)	132, 1029, 1086
Bst4CI	ACNGT	2 cut(s)	1359, 1483
BstAPI	GCANNNNNTGC	2 cut(s)	1465, 1547
BstAUI	TGTACA	1 cut(s)	1618
BstBI	TTCGAA	1 cut(s)	1288
BstC8I	GCNNGC	6 cut(s)	174, 583, 620, 1082, 1092, 1564
BstDEI	CTNAG	6 cut(s)	158, 243, 705, 912, 1298, 1556
BstDSI	CCRYGG	2 cut(s)	487, 899
BstEII	GGTNACC	1 cut(s)	808
BstF5I	GGATG	3 cut(s)	497, 643, 1213
BstFNI	CGCG	1 cut(s)	263
BstHHI	GCGC	3 cut(s)	172, 587, 1552
BstMAI	GTCTC	5 cut(s)	360, 576, 615, 775, 1149
BstNI	CCWGG	3 cut(s)	132, 1029, 1086
BstNSI	RCATGY	3 cut(s)	585, 1084, 1625
BstPI	GGTNACC	1 cut(s)	808
BstSCI	CCNGG	4 cut(s)	130, 1027, 1084, 1502
BstSFI	CTRYAG	1 cut(s)	1520
BstSLI	GKGCMC	1 cut(s)	1092
BstUI	CGCG	1 cut(s)	263
BstV1I	GCAGC	4 cut(s)	154, 1414, 1452, 1534
BstV2I	GAAGAC	2 cut(s)	264, 1040
BstX2I	RGATCY	2 cut(s)	74, 1516
BstYI	RGATCY	2 cut(s)	74, 1516
BsuRI	GGCC	5 cut(s)	549, 618, 634, 1090, 1176
BtgI	CCRYGG	2 cut(s)	487, 899
BtgZI	GCGATG	4 cut(s)	36, 45, 162, 410
BtsCI	GGATG	3 cut(s)	497, 643, 1213
BtsI	GCAGTG	1 cut(s)	482
BtsIMutI	CAGTG	2 cut(s)	482, 723
BveI	ACCTGC	2 cut(s)	1093, 1532
Cac8I	GCNNGC	6 cut(s)	174, 583, 620, 1082, 1092, 1564
CaiI	CAGNNNCTG	3 cut(s)	358, 1387, 1465
CfoI	GCGC	3 cut(s)	172, 587, 1552
Cfr13I	GGNCC	6 cut(s)	328, 548, 863, 1088, 1089, 1174
CseI	GACGC	1 cut(s)	269
Csp6I	GTAC	5 cut(s)	301, 382, 1234, 1335, 1619
CspCI	CAANNNNNGTGG	2 cut(s)	1307, 1342
CviQI	GTAC	5 cut(s)	301, 382, 1234, 1335, 1619
DdeI	CTNAG	6 cut(s)	158, 243, 705, 912, 1298, 1556
DraI	TTTAAA	1 cut(s)	847
DrdI	GACNNNNNNGTC	1 cut(s)	1163
DseDI	GACNNNNNNGTC	1 cut(s)	1163
EaeI	YGGCCR	1 cut(s)	632
EciI	GGCGGA	1 cut(s)	480
Eco130I	CCWWGG	3 cut(s)	487, 866, 1203
Eco147I	AGGCCT	1 cut(s)	618
Eco24I	GRGCYC	1 cut(s)	1092
Eco31I	GGTCTC	2 cut(s)	360, 576
Eco47I	GGWCC	2 cut(s)	328, 863
Eco57I	CTGAAG	3 cut(s)	465, 564, 1154
Eco88I	CYCGRG	2 cut(s)	851, 1322
Eco91I	GGTNACC	1 cut(s)	808
EcoO109I	RGGNCCY	2 cut(s)	548, 1088
EcoO65I	GGTNACC	1 cut(s)	808
EcoRII	CCWGG	3 cut(s)	130, 1027, 1084
EcoT14I	CCWWGG	3 cut(s)	487, 866, 1203
EcoT38I	GRGCYC	1 cut(s)	1092
ErhI	CCWWGG	3 cut(s)	487, 866, 1203
FauI	CCCGC	2 cut(s)	76, 1099
Fnu4HI	GCNGC	8 cut(s)	56, 168, 182, 185, 1304, 1403, 1466, 1523
FokI	GGATG	3 cut(s)	504, 650, 1220
FriOI	GRGCYC	1 cut(s)	1092
Fsp4HI	GCNGC	8 cut(s)	56, 168, 182, 185, 1304, 1403, 1466, 1523
FspBI	CTAG	2 cut(s)	1113, 1469
GlaI	GCGC	3 cut(s)	171, 586, 1551
GluI	GCNGC	8 cut(s)	56, 168, 182, 185, 1304, 1403, 1466, 1523
GsuI	CTGGAG	1 cut(s)	900
HaeIII	GGCC	5 cut(s)	549, 618, 634, 1090, 1176
HapII	CCGG	4 cut(s)	221, 635, 813, 1503
HgaI	GACGC	1 cut(s)	269
HhaI	GCGC	3 cut(s)	172, 587, 1552
Hin6I	GCGC	3 cut(s)	170, 585, 1550
HinP1I	GCGC	3 cut(s)	170, 585, 1550
HindIII	AAGCTT	3 cut(s)	534, 962, 1434
HinfI	GANTC	7 cut(s)	392, 526, 554, 1036, 1211, 1395, 1507
HpaII	CCGG	4 cut(s)	221, 635, 813, 1503
HphI	GGTGA	3 cut(s)	401, 802, 1229
Hpy166II	GTNNAC	2 cut(s)	701, 1236
Hpy188I	TCNGA	8 cut(s)	159, 445, 544, 775, 1257, 1383, 1516, 1557
Hpy188III	TCNNGA	5 cut(s)	82, 97, 365, 879, 1450
Hpy8I	GTNNAC	2 cut(s)	701, 1236
Hpy99I	CGWCG	1 cut(s)	274
HpyCH4III	ACNGT	2 cut(s)	1359, 1483
HpyCH4IV	ACGT	2 cut(s)	1014, 1378
HpyCH4V	TGCA	6 cut(s)	26, 176, 475, 1496, 1522, 1582
HpyF3I	CTNAG	6 cut(s)	158, 243, 705, 912, 1298, 1556
HpySE526I	ACGT	2 cut(s)	1014, 1378
HspAI	GCGC	3 cut(s)	170, 585, 1550
KpnI	GGTACC	1 cut(s)	304
LmnI	GCTCC	4 cut(s)	239, 881, 1010, 1424
Lsp1109I	GCAGC	4 cut(s)	154, 1414, 1452, 1534
LweI	GCATC	5 cut(s)	35, 185, 407, 1374, 1505
MaeI	CTAG	2 cut(s)	1113, 1469
MaeII	ACGT	2 cut(s)	1014, 1378
MaeIII	GTNAC	4 cut(s)	122, 718, 808, 1340
MboII	GAAGA	7 cut(s)	9, 31, 242, 269, 332, 1045, 1060
MfeI	CAATTG	1 cut(s)	283
MflI	RGATCY	2 cut(s)	74, 1516
MhlI	GDGCHC	2 cut(s)	1060, 1092
MluCI	AATT	4 cut(s)	283, 692, 1597, 1633
MlyI	GAGTC	1 cut(s)	1030
MmeI	TCCRAC	2 cut(s)	955, 1280
MseI	TTAA	4 cut(s)	522, 846, 1224, 1632
MspA1I	CMGCKG	1 cut(s)	197
MspI	CCGG	4 cut(s)	221, 635, 813, 1503
MspR9I	CCNGG	4 cut(s)	132, 1029, 1086, 1504
MunI	CAATTG	1 cut(s)	283
Mva1269I	GAATGC	1 cut(s)	1445
MvaI	CCWGG	3 cut(s)	132, 1029, 1086
MvnI	CGCG	1 cut(s)	263
NciI	CCSGG	1 cut(s)	1504
NcoI	CCATGG	1 cut(s)	487
NlaIV	GGNNCC	6 cut(s)	219, 302, 330, 1026, 1090, 1110
NmuCI	GTSAC	3 cut(s)	718, 808, 1340
NspI	RCATGY	3 cut(s)	585, 1084, 1625
NspV	TTCGAA	1 cut(s)	1288
PaeI	GCATGC	2 cut(s)	585, 1084
PaeR7I	CTCGAG	1 cut(s)	851
PaqCI	CACCTGC	1 cut(s)	1093
PceI	AGGCCT	1 cut(s)	618
PctI	GAATGC	1 cut(s)	1445
PfeI	GAWTC	6 cut(s)	392, 526, 554, 1211, 1395, 1507
PflMI	CCANNNNNTGG	1 cut(s)	974
PkrI	GCNGC	8 cut(s)	57, 169, 183, 186, 1305, 1404, 1467, 1524
PleI	GAGTC	1 cut(s)	1030
PpsI	GAGTC	1 cut(s)	1030
PshBI	ATTAAT	1 cut(s)	1632
Psp1406I	AACGTT	1 cut(s)	1014
Psp6I	CCWGG	3 cut(s)	130, 1027, 1084
PspEI	GGTNACC	1 cut(s)	808
PspGI	CCWGG	3 cut(s)	130, 1027, 1084
PspN4I	GGNNCC	6 cut(s)	219, 302, 330, 1026, 1090, 1110
PspOMI	GGGCCC	1 cut(s)	1088
PspPI	GGNCC	6 cut(s)	328, 548, 863, 1088, 1089, 1174
PspXI	VCTCGAGB	1 cut(s)	851
PstI	CTGCAG	1 cut(s)	1524
PstNI	CAGNNNCTG	3 cut(s)	358, 1387, 1465
PsuI	RGATCY	2 cut(s)	74, 1516
RsaI	GTAC	5 cut(s)	302, 383, 1235, 1336, 1620
RsaNI	GTAC	5 cut(s)	301, 382, 1234, 1335, 1619
SaqAI	TTAA	4 cut(s)	522, 846, 1224, 1632
SatI	GCNGC	8 cut(s)	56, 168, 182, 185, 1304, 1403, 1466, 1523
Sau96I	GGNCC	6 cut(s)	328, 548, 863, 1088, 1089, 1174
SchI	GAGTC	1 cut(s)	1030
ScrFI	CCNGG	4 cut(s)	132, 1029, 1086, 1504
SduI	GDGCHC	2 cut(s)	1060, 1092
SfaNI	GCATC	5 cut(s)	35, 185, 407, 1374, 1505
SfcI	CTRYAG	1 cut(s)	1520
Sfr274I	CTCGAG	1 cut(s)	851
SfuI	TTCGAA	1 cut(s)	1288
SinI	GGWCC	2 cut(s)	328, 863
SlaI	CTCGAG	1 cut(s)	851
SmlI	CTYRAG	4 cut(s)	80, 531, 612, 851
SmoI	CTYRAG	4 cut(s)	80, 531, 612, 851
SphI	GCATGC	2 cut(s)	585, 1084
Sse9I	AATT	4 cut(s)	283, 692, 1597, 1633
SseBI	AGGCCT	1 cut(s)	618
SsiI	CCGC	8 cut(s)	56, 69, 182, 185, 195, 465, 1092, 1303
SspMI	CTAG	2 cut(s)	1113, 1469
StuI	AGGCCT	1 cut(s)	618
StyD4I	CCNGG	4 cut(s)	130, 1027, 1084, 1502
StyI	CCWWGG	3 cut(s)	487, 866, 1203
TaaI	ACNGT	2 cut(s)	1359, 1483
TaiI	ACGT	2 cut(s)	1017, 1381
TaqI	TCGA	8 cut(s)	269, 364, 408, 852, 1060, 1288, 1398, 1590
TaqII	GACCGA	1 cut(s)	558
TasI	AATT	4 cut(s)	283, 692, 1597, 1633
TatI	WGTACW	2 cut(s)	1233, 1618
TauI	GCSGC	4 cut(s)	58, 184, 187, 1306
TfiI	GAWTC	6 cut(s)	392, 526, 554, 1211, 1395, 1507
Tru1I	TTAA	4 cut(s)	522, 846, 1224, 1632
Tru9I	TTAA	4 cut(s)	522, 846, 1224, 1632
TscAI	CASTG	2 cut(s)	482, 723
TseFI	GTSAC	3 cut(s)	718, 808, 1340
TseI	GCWGC	4 cut(s)	167, 1402, 1465, 1522
Tsp45I	GTSAC	3 cut(s)	718, 808, 1340
TspDTI	ATGAA	8 cut(s)	471, 474, 528, 705, 903, 1181, 1224, 1599
TspGWI	ACGGA	5 cut(s)	252, 466, 916, 1167, 1543
TspRI	CASTG	2 cut(s)	482, 723
Van91I	CCANNNNNTGG	1 cut(s)	974
VpaK11BI	GGWCC	2 cut(s)	328, 863
VspI	ATTAAT	1 cut(s)	1632
XapI	RAATTY	2 cut(s)	692, 1597
XceI	RCATGY	3 cut(s)	585, 1084, 1625
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1092
XhoI	CTCGAG	1 cut(s)	851
XspI	CTAG	2 cut(s)	1113, 1469

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.