Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5C

Orthogroup ID

OG0014312

Physical Location & Seq

Genomic Coordinates Forward (+)

54260566 .. 54266540

Gene Structure 5975 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5CG405500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1641 bp

ATGGCAATCTTGCTCTCTTCCTCTGCTTCTGCTTCTGCTTCAATCTTCACATCTTCACCATCCCAATCCCTCAAGCCACTGAACCCATCTCTCCCTTTCTTGATCTCCACCGCTAACCCACATCGAAAACCTTCAGGAAGAGCAAAGAGTCTTTTTCCTCCAAGAGTAGCAACCCAACCTCAGACCACAGACCCAGATCGACCCACCAAAACAGAACAAGATGGGGAAAGTTACAATCTTGGGGATGAGGTTGAGGATGAAAGCTCAGCAACCAAGTTCAATTGGAGAGATCACTGGTACCCAGTTTCTTTGATTGAAGATTTGGACCCCAAATTGCCTACCCCATTTCAGCTTCTGGGTCGAGACATAGTTTTGTGGTTTGATAGGAACAAACAGGAATGGGTGGCTTTAGATGACAAATGCCCTCACCGCCTCGCGCCATTATCTGAAGGGAGGATTGATGAAGGTGGAAACTTGCAGTGTTCATACCATGGGTGGTCATTTGATGGGTGTGGATCCTGTGTTAAGATTCCACAGGCTTCACCTCAAGGTCCTGAAGCTCGTGCAGTCAGGTCTCCAAGAGCATGTGCCACTAGGTTTCCTACTCAGGTGTCTCAAGGCCTGCTCTTTGTCTGGCCTGATGAGAATGGTTGGGAAAGAGCCAATGCCTCCAAGCCTCCAATGCTACCTGATGAGTTTGGCAAACCTGAGTTTTCGACGGTGACAATCCAGCGTGATCTCTTCTATGGCTATGATACCCTCATGGAAAATGTGTCTGATCCTTCCCACATTGACTTTGCTCATCACAAGGTTACAGGAAGGAGAGATAGAGCTAAGCCTTTGCCATTTAAACTGGAAGATAGTGGCCCTTGGGGCTTTTCTGGTGCAAATGAGGGCAACCCACGGATTACTGCCAAGTTTATAGCACCTTGTTATTATTTAAATAAAATAGAGATTGATACAAAGCTTCCACTAGTTGGTGATCAAAAATGGGTTATATGGATTTGTTCCTTCAATGTTCCAATGGCACCAGGGAAGACTCGCTCTATTGTTTGTAGTGCTCGAAACTTCTTCCAGTTCAGCATGCCAGGGCCTGCTTGGTGGCAGGTGATTCCTAGATGGCATGAACATTGGACTTCAAATAAGGTGTATGATGGAGACATGATTGTCCTTCAGGGTCAAGAGAAGATCTTTCTATCCAAGTCAAAGGAGGAATTTGGTGATGTTAATAAGCAGTACACGACAATTACATTTACACCCACACAAGCAGATCGTTTTGTCTTGGCATTTCGAAATTGGCTGAGGCGACACGGCAACAGCCAACCTGAGTGGTTTGGTACAAGCGACCAGCAACCTTTGCCCTCAACTATCTTATCAAAACGTCAGATGTTGGACAGATTTGAGCAGCACACACTTAAATGTTCATCATGTAAAGGAGCTTATACAGCATTCCAGACATGGAAGAAGTTGCTAATTGGAGCAGCCGTTGTTTTCGCCTCAACGGCCGGGATCCCTTCAGGTCTGCAGCTACGGATCATTTTGGCTGGGTTTGCCCTTGTGAGTGCTGGGTTAGCTTATGCTTTACATGAACTGGAAAAGAATTTTGTTTTTGTTGATTATGTACATGCTGACATTGAATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0002376 GO:0003006 GO:0003674 GO:0003824 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006725 GO:0006778 GO:0006787 GO:0006807 GO:0006950 GO:0006952 GO:0006955 GO:0007275 GO:0008150 GO:0008152 GO:0008219 GO:0009056 GO:0009507 GO:0009526 GO:0009528 GO:0009534 GO:0009536 GO:0009579 GO:0009605 GO:0009607 GO:0009617 GO:0009706 GO:0009791 GO:0009814 GO:0009816 GO:0009908 GO:0009941 GO:0009987 GO:0010154 GO:0015994 GO:0015996 GO:0016020 GO:0016491 GO:0016730 GO:0019439 GO:0019866 GO:0022414 GO:0031090 GO:0031967 GO:0031969 GO:0031975 GO:0031976 GO:0031984 GO:0032441 GO:0032501 GO:0032502 GO:0033013 GO:0033015 GO:0034641 GO:0042170 GO:0042440 GO:0042742 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044248 GO:0044270 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0045087 GO:0046149 GO:0046483 GO:0046700 GO:0048037 GO:0048367 GO:0048608 GO:0048731 GO:0048856 GO:0050896 GO:0051186 GO:0051187 GO:0051536 GO:0051540 GO:0051704 GO:0051707 GO:0055114 GO:0061458 GO:0071704 GO:0090567 GO:0098542 GO:1901360 GO:1901361 GO:1901564 GO:1901565 GO:1901575

KEGG Pathways

Metabolic & Signaling

ko00860 ko01110 map00860 map01110

Pfam Domains

Protein Families

PaO Rieske

Protein Analysis

546

Amino Acids

61.45

Weight (kDa)

7.19

Isoelectric Point (pI)

44.07

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Rieske	PF00355	98 - 182	4.6e-24	Rieske [2Fe-2S] domain
PaO	PF08417	307 - 403	4.6e-19	Pheophorbide a oxygenase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0014312)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G44880
fragaria_vesca	FvH4_3g30560 FvH4_3g30560 FvH4_3g30560
malus_domestica	MD11G1149200.v1.1
prunus_persica	Prupe.6G113600_v2.0.a1
pyrus_communis	pycom11g12210
rosa_chinensis	RchiOBHm_Chr5g0056561
rosa_laevigata	RLG00000035105
rosa_multiflora	Rmu_sc0000366.1_g000002
rosa_roxburghii	Rroxscaffold_1G00023780
rosa_rugosa	Rorug05G0300800 Rorug05G0300900
rosa_samantha	Rh5BG382300 Rh5CG405500 Rh5DG395300
rosa_wichuraiana	Rw5G034770

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1096
AasI	GACNNNNNNGTC	1 cut(s)	1166
Acc36I	ACCTGC	1 cut(s)	1096
Acc65I	GGTACC	1 cut(s)	297
AccB1I	GGYRCC	2 cut(s)	297, 1027
AccB7I	CCANNNNNTGG	1 cut(s)	977
AccII	CGCG	1 cut(s)	437
AciI	CCGC	2 cut(s)	111, 430
AclWI	GGATC	6 cut(s)	510, 523, 773, 1504, 1517, 1541
AcoI	YGGCCR	1 cut(s)	1503
AcsI	RAATTY	2 cut(s)	1214, 1600
AcuI	CTGAAG	5 cut(s)	117, 468, 576, 1157, 1500
AfaI	GTAC	4 cut(s)	299, 1238, 1339, 1623
AfiI	CCNNNNNNNGG	1 cut(s)	977
AgsI	TTSAA	6 cut(s)	42, 280, 317, 1015, 1140, 1637
AhlI	ACTAGT	1 cut(s)	973
AjnI	CCWGG	2 cut(s)	1030, 1087
AluBI	AGCT	8 cut(s)	264, 352, 560, 833, 967, 1439, 1528, 1574
AluI	AGCT	8 cut(s)	264, 352, 560, 833, 967, 1439, 1528, 1574
Alw21I	GWGCWC	1 cut(s)	1063
Alw26I	GTCTC	4 cut(s)	357, 579, 618, 1152
AlwI	GGATC	6 cut(s)	510, 523, 773, 1504, 1517, 1541
AlwNI	CAGNNNCTG	2 cut(s)	355, 1094
AoxI	GGCC	5 cut(s)	619, 635, 865, 1091, 1503
ApeKI	GCWGC	3 cut(s)	1405, 1481, 1525
ApoI	RAATTY	2 cut(s)	1214, 1600
Asp700I	GAANNNNTTC	1 cut(s)	130
Asp718I	GGTACC	1 cut(s)	297
AspLEI	GCGC	1 cut(s)	439
AspS9I	GGNCC	4 cut(s)	325, 551, 866, 1091
AsuC2I	CCSGG	1 cut(s)	1507
AsuHPI	GGTGA	7 cut(s)	48, 419, 534, 733, 992, 1120, 1232
AsuII	TTCGAA	1 cut(s)	1291
AvaII	GGWCC	2 cut(s)	325, 551
BamHI	GGATCC	2 cut(s)	515, 1509
BanI	GGYRCC	2 cut(s)	297, 1027
BauI	CACGAG	1 cut(s)	561
BbsI	GAAGAC	1 cut(s)	1043
Bbv12I	GWGCWC	1 cut(s)	1063
BbvCI	CCTCAGC	1 cut(s)	1301
BbvI	GCAGC	3 cut(s)	1417, 1493, 1537
BccI	CCATC	6 cut(s)	67, 94, 215, 500, 1113, 1148
BceAI	ACGGC	3 cut(s)	1327, 1469, 1518
BciT130I	CCWGG	2 cut(s)	1032, 1089
BclI	TGATCA	1 cut(s)	982
BcnI	CCSGG	1 cut(s)	1507
BcoDI	GTCTC	4 cut(s)	357, 579, 618, 1152
BcuI	ACTAGT	1 cut(s)	973
BfaI	CTAG	3 cut(s)	594, 974, 1116
BfmI	CTRYAG	1 cut(s)	1523
BfuAI	ACCTGC	1 cut(s)	1096
BglI	GCCNNNNNGGC	2 cut(s)	873, 1502
BglII	AGATCT	1 cut(s)	1188
BisI	GCNGC	3 cut(s)	1406, 1482, 1526
BlpI	GCTNAGC	2 cut(s)	265, 834
BlsI	GCNGC	3 cut(s)	1407, 1483, 1527
Bme1390I	CCNGG	3 cut(s)	1032, 1089, 1507
Bme18I	GGWCC	2 cut(s)	325, 551
BmgT120I	GGNCC	4 cut(s)	325, 551, 866, 1091
BmiI	GGNNCC	5 cut(s)	299, 327, 517, 1029, 1511
BmrFI	CCNGG	3 cut(s)	1032, 1089, 1507
BmrI	ACTGGG	1 cut(s)	296
BmuI	ACTGGG	1 cut(s)	296
BpiI	GAAGAC	1 cut(s)	1043
Bpu10I	CCTNAGC	1 cut(s)	1301
Bpu1102I	GCTNAGC	2 cut(s)	265, 834
Bpu14I	TTCGAA	1 cut(s)	1291
BpuEI	CTTGAG	3 cut(s)	56, 531, 600
BpuMI	CCSGG	1 cut(s)	1507
BsaI	GGTCTC	1 cut(s)	579
BsaJI	CCNNGG	5 cut(s)	490, 869, 902, 1031, 1088
BsaXI	ACNNNNNCTCC	2 cut(s)	1470, 1500
Bsc4I	CCNNNNNNNGG	1 cut(s)	977
Bse1I	ACTGG	5 cut(s)	299, 302, 858, 1075, 1596
BseBI	CCWGG	2 cut(s)	1032, 1089
BseDI	CCNNGG	5 cut(s)	490, 869, 902, 1031, 1088
BseGI	GGATG	3 cut(s)	59, 250, 262
BseLI	CCNNNNNNNGG	1 cut(s)	977
BseMII	CTCAG	6 cut(s)	194, 279, 620, 699, 1292, 1317
BseNI	ACTGG	5 cut(s)	299, 302, 858, 1075, 1596
BseX3I	CGGCCG	1 cut(s)	1503
BseXI	GCAGC	3 cut(s)	1417, 1493, 1537
BseYI	CCCAGC	2 cut(s)	1544, 1565
BsgI	GTGCAG	1 cut(s)	585
Bsh1236I	CGCG	1 cut(s)	437
Bsh1285I	CGRYCG	1 cut(s)	1506
BshFI	GGCC	5 cut(s)	621, 637, 867, 1093, 1505
BshNI	GGYRCC	2 cut(s)	297, 1027
BsiEI	CGRYCG	1 cut(s)	1506
BsiHKAI	GWGCWC	1 cut(s)	1063
BsiSI	CCGG	1 cut(s)	1506
BslI	CCNNNNNNNGG	1 cut(s)	977
BsmAI	GTCTC	4 cut(s)	357, 579, 618, 1152
BsmI	GAATGC	1 cut(s)	1448
BsnI	GGCC	5 cut(s)	621, 637, 867, 1093, 1505
Bso31I	GGTCTC	1 cut(s)	579
Bsp119I	TTCGAA	1 cut(s)	1291
Bsp1286I	GDGCHC	1 cut(s)	1063
Bsp1407I	TGTACA	1 cut(s)	1621
Bsp1720I	GCTNAGC	2 cut(s)	265, 834
Bsp19I	CCATGG	1 cut(s)	490
BspACI	CCGC	2 cut(s)	111, 430
BspANI	GGCC	5 cut(s)	621, 637, 867, 1093, 1505
BspCNI	CTCAG	6 cut(s)	193, 278, 619, 700, 1293, 1318
BspFNI	CGCG	1 cut(s)	437
BspLI	GGNNCC	5 cut(s)	299, 327, 517, 1029, 1511
BspMAI	CTGCAG	1 cut(s)	1527
BspMI	ACCTGC	1 cut(s)	1096
BspPI	GGATC	6 cut(s)	510, 523, 773, 1504, 1517, 1541
BspQI	GCTCTTC	1 cut(s)	133
BspT104I	TTCGAA	1 cut(s)	1291
BspT107I	GGYRCC	2 cut(s)	297, 1027
BspTNI	GGTCTC	1 cut(s)	579
BsrGI	TGTACA	1 cut(s)	1621
BsrI	ACTGG	5 cut(s)	299, 302, 858, 1075, 1596
BssECI	CCNNGG	5 cut(s)	490, 869, 902, 1031, 1088
BssSI	CACGAG	1 cut(s)	561
BssT1I	CCWWGG	2 cut(s)	490, 869
Bst2BI	CACGAG	1 cut(s)	561
Bst2UI	CCWGG	2 cut(s)	1032, 1089
Bst4CI	ACNGT	1 cut(s)	721
Bst6I	CTCTTC	3 cut(s)	22, 133, 746
BstAPI	GCANNNNNTGC	1 cut(s)	1357
BstAUI	TGTACA	1 cut(s)	1621
BstBI	TTCGAA	1 cut(s)	1291
BstC8I	GCNNGC	3 cut(s)	623, 1085, 1095
BstDEI	CTNAG	7 cut(s)	180, 265, 606, 708, 834, 1301, 1326
BstDSI	CCRYGG	2 cut(s)	490, 902
BstF5I	GGATG	3 cut(s)	59, 250, 262
BstFNI	CGCG	1 cut(s)	437
BstHHI	GCGC	1 cut(s)	439
BstMAI	GTCTC	4 cut(s)	357, 579, 618, 1152
BstMCI	CGRYCG	1 cut(s)	1506
BstMWI	GCNNNNNNNGC	8 cut(s)	429, 682, 873, 1357, 1445, 1502, 1550, 1571
BstNI	CCWGG	2 cut(s)	1032, 1089
BstNSI	RCATGY	3 cut(s)	588, 1087, 1628
BstSCI	CCNGG	3 cut(s)	1030, 1087, 1505
BstSFI	CTRYAG	1 cut(s)	1523
BstUI	CGCG	1 cut(s)	437
BstV1I	GCAGC	3 cut(s)	1417, 1493, 1537
BstV2I	GAAGAC	1 cut(s)	1043
BstX2I	RGATCY	3 cut(s)	515, 1188, 1509
BstYI	RGATCY	3 cut(s)	515, 1188, 1509
BstZI	CGGCCG	1 cut(s)	1503
BsuRI	GGCC	5 cut(s)	621, 637, 867, 1093, 1505
BtgI	CCRYGG	2 cut(s)	490, 902
BtsCI	GGATG	3 cut(s)	59, 250, 262
BtsI	GCAGTG	1 cut(s)	485
BtsIMutI	CAGTG	3 cut(s)	77, 292, 485
BveI	ACCTGC	1 cut(s)	1096
Cac8I	GCNNGC	3 cut(s)	623, 1085, 1095
CaiI	CAGNNNCTG	2 cut(s)	355, 1094
CfoI	GCGC	1 cut(s)	439
Cfr13I	GGNCC	4 cut(s)	325, 551, 866, 1091
Csp6I	GTAC	4 cut(s)	298, 1237, 1338, 1622
CspCI	CAANNNNNGTGG	2 cut(s)	1310, 1345
CviQI	GTAC	4 cut(s)	298, 1237, 1338, 1622
DdeI	CTNAG	7 cut(s)	180, 265, 606, 708, 834, 1301, 1326
DraI	TTTAAA	2 cut(s)	850, 942
DrdI	GACNNNNNNGTC	1 cut(s)	1166
DseDI	GACNNNNNNGTC	1 cut(s)	1166
EaeI	YGGCCR	1 cut(s)	1503
EagI	CGGCCG	1 cut(s)	1503
Eam1104I	CTCTTC	3 cut(s)	22, 133, 746
EarI	CTCTTC	3 cut(s)	22, 133, 746
EclXI	CGGCCG	1 cut(s)	1503
Eco130I	CCWWGG	2 cut(s)	490, 869
Eco147I	AGGCCT	1 cut(s)	621
Eco31I	GGTCTC	1 cut(s)	579
Eco47I	GGWCC	2 cut(s)	325, 551
Eco52I	CGGCCG	1 cut(s)	1503
Eco57I	CTGAAG	5 cut(s)	117, 468, 576, 1157, 1500
EcoO109I	RGGNCCY	2 cut(s)	551, 1091
EcoRII	CCWGG	2 cut(s)	1030, 1087
EcoT14I	CCWWGG	2 cut(s)	490, 869
ErhI	CCWWGG	2 cut(s)	490, 869
FbaI	TGATCA	1 cut(s)	982
Fnu4HI	GCNGC	3 cut(s)	1406, 1482, 1526
FokI	GGATG	3 cut(s)	46, 257, 269
Fsp4HI	GCNGC	3 cut(s)	1406, 1482, 1526
FspBI	CTAG	3 cut(s)	594, 974, 1116
GlaI	GCGC	1 cut(s)	438
GluI	GCNGC	3 cut(s)	1406, 1482, 1526
GsaI	CCCAGC	2 cut(s)	1548, 1569
HaeIII	GGCC	5 cut(s)	621, 637, 867, 1093, 1505
HapII	CCGG	1 cut(s)	1506
HhaI	GCGC	1 cut(s)	439
Hin6I	GCGC	1 cut(s)	437
HinP1I	GCGC	1 cut(s)	437
HindIII	AAGCTT	1 cut(s)	965
HinfI	GANTC	4 cut(s)	148, 529, 1039, 1111
HpaII	CCGG	1 cut(s)	1506
HphI	GGTGA	7 cut(s)	48, 419, 534, 733, 992, 1120, 1232
Hpy166II	GTNNAC	1 cut(s)	1239
Hpy188I	TCNGA	4 cut(s)	183, 448, 778, 1386
Hpy188III	TCNNGA	6 cut(s)	100, 135, 362, 554, 1181, 1453
Hpy8I	GTNNAC	1 cut(s)	1239
Hpy99I	CGWCG	1 cut(s)	721
HpyAV	CCTTC	8 cut(s)	141, 443, 458, 792, 813, 1021, 1181, 1524
HpyCH4III	ACNGT	1 cut(s)	721
HpyCH4IV	ACGT	1 cut(s)	1381
HpyCH4V	TGCA	4 cut(s)	478, 566, 887, 1525
HpyF10VI	GCNNNNNNNGC	8 cut(s)	429, 682, 873, 1357, 1445, 1502, 1550, 1571
HpyF3I	CTNAG	7 cut(s)	180, 265, 606, 708, 834, 1301, 1326
HpySE526I	ACGT	1 cut(s)	1381
HspAI	GCGC	1 cut(s)	437
KpnI	GGTACC	1 cut(s)	301
Ksp22I	TGATCA	1 cut(s)	982
LguI	GCTCTTC	1 cut(s)	133
LmnI	GCTCC	2 cut(s)	1436, 1478
Lsp1109I	GCAGC	3 cut(s)	1417, 1493, 1537
MaeI	CTAG	3 cut(s)	594, 974, 1116
MaeII	ACGT	1 cut(s)	1381
MaeIII	GTNAC	3 cut(s)	230, 721, 811
MfeI	CAATTG	1 cut(s)	280
MflI	RGATCY	3 cut(s)	515, 1188, 1509
MhlI	GDGCHC	1 cut(s)	1063
MluCI	AATT	7 cut(s)	280, 332, 1214, 1245, 1294, 1473, 1600
MlyI	GAGTC	2 cut(s)	157, 1033
MmeI	TCCRAC	1 cut(s)	1371
MroXI	GAANNNNTTC	1 cut(s)	130
MseI	TTAA	5 cut(s)	525, 849, 941, 1227, 1416
MslI	CAYNNNNRTG	1 cut(s)	1417
MspI	CCGG	1 cut(s)	1506
MspR9I	CCNGG	3 cut(s)	1032, 1089, 1507
MunI	CAATTG	1 cut(s)	280
Mva1269I	GAATGC	1 cut(s)	1448
MvaI	CCWGG	2 cut(s)	1032, 1089
MvnI	CGCG	1 cut(s)	437
MwoI	GCNNNNNNNGC	8 cut(s)	429, 682, 873, 1357, 1445, 1502, 1550, 1571
NciI	CCSGG	1 cut(s)	1507
NcoI	CCATGG	1 cut(s)	490
NlaIV	GGNNCC	5 cut(s)	299, 327, 517, 1029, 1511
NmuCI	GTSAC	1 cut(s)	721
NspI	RCATGY	3 cut(s)	588, 1087, 1628
NspV	TTCGAA	1 cut(s)	1291
PaeI	GCATGC	1 cut(s)	1087
PaqCI	CACCTGC	1 cut(s)	1096
PceI	AGGCCT	1 cut(s)	621
PciSI	GCTCTTC	1 cut(s)	133
PctI	GAATGC	1 cut(s)	1448
PdmI	GAANNNNTTC	1 cut(s)	130
PfeI	GAWTC	2 cut(s)	529, 1111
PflMI	CCANNNNNTGG	1 cut(s)	977
PkrI	GCNGC	3 cut(s)	1407, 1483, 1527
PleI	GAGTC	2 cut(s)	156, 1033
PpsI	GAGTC	2 cut(s)	156, 1033
PpuMI	RGGWCCY	1 cut(s)	551
Psp5II	RGGWCCY	1 cut(s)	551
Psp6I	CCWGG	2 cut(s)	1030, 1087
PspFI	CCCAGC	2 cut(s)	1544, 1565
PspGI	CCWGG	2 cut(s)	1030, 1087
PspN4I	GGNNCC	5 cut(s)	299, 327, 517, 1029, 1511
PspPI	GGNCC	4 cut(s)	325, 551, 866, 1091
PspPPI	RGGWCCY	1 cut(s)	551
PstI	CTGCAG	1 cut(s)	1527
PstNI	CAGNNNCTG	2 cut(s)	355, 1094
PsuI	RGATCY	3 cut(s)	515, 1188, 1509
RsaI	GTAC	4 cut(s)	299, 1238, 1339, 1623
RsaNI	GTAC	4 cut(s)	298, 1237, 1338, 1622
RseI	CAYNNNNRTG	1 cut(s)	1417
SapI	GCTCTTC	1 cut(s)	133
SaqAI	TTAA	5 cut(s)	525, 849, 941, 1227, 1416
SatI	GCNGC	3 cut(s)	1406, 1482, 1526
Sau96I	GGNCC	4 cut(s)	325, 551, 866, 1091
SchI	GAGTC	2 cut(s)	157, 1033
ScrFI	CCNGG	3 cut(s)	1032, 1089, 1507
SduI	GDGCHC	1 cut(s)	1063
SfcI	CTRYAG	1 cut(s)	1523
SfuI	TTCGAA	1 cut(s)	1291
SinI	GGWCC	2 cut(s)	325, 551
SmiI	ATTTAAAT	1 cut(s)	942
SmiMI	CAYNNNNRTG	1 cut(s)	1417
SmlI	CTYRAG	3 cut(s)	71, 546, 615
SmoI	CTYRAG	3 cut(s)	71, 546, 615
SpeI	ACTAGT	1 cut(s)	973
SphI	GCATGC	1 cut(s)	1087
Sse9I	AATT	7 cut(s)	280, 332, 1214, 1245, 1294, 1473, 1600
SseBI	AGGCCT	1 cut(s)	621
SsiI	CCGC	2 cut(s)	111, 430
SspMI	CTAG	3 cut(s)	594, 974, 1116
StuI	AGGCCT	1 cut(s)	621
StyD4I	CCNGG	3 cut(s)	1030, 1087, 1505
StyI	CCWWGG	2 cut(s)	490, 869
SwaI	ATTTAAAT	1 cut(s)	942
TaaI	ACNGT	1 cut(s)	721
TaiI	ACGT	1 cut(s)	1384
TaqI	TCGA	6 cut(s)	124, 199, 361, 716, 1063, 1291
TasI	AATT	7 cut(s)	280, 332, 1214, 1245, 1294, 1473, 1600
TatI	WGTACW	2 cut(s)	1236, 1621
TfiI	GAWTC	2 cut(s)	529, 1111
Tru1I	TTAA	5 cut(s)	525, 849, 941, 1227, 1416
Tru9I	TTAA	5 cut(s)	525, 849, 941, 1227, 1416
TscAI	CASTG	3 cut(s)	84, 299, 485
TseFI	GTSAC	1 cut(s)	721
TseI	GCWGC	3 cut(s)	1405, 1481, 1525
Tsp45I	GTSAC	1 cut(s)	721
TspDTI	ATGAA	6 cut(s)	273, 474, 477, 1140, 1413, 1602
TspGWI	ACGGA	2 cut(s)	919, 1546
TspRI	CASTG	3 cut(s)	84, 299, 485
Van91I	CCANNNNNTGG	1 cut(s)	977
VpaK11BI	GGWCC	2 cut(s)	325, 551
XapI	RAATTY	2 cut(s)	1214, 1600
XceI	RCATGY	3 cut(s)	588, 1087, 1628
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1095
XmnI	GAANNNNTTC	1 cut(s)	130
XspI	CTAG	3 cut(s)	594, 974, 1116

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.