Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr7

Orthogroup ID

OG0014312

Physical Location & Seq

Genomic Coordinates Forward (+)

60958462 .. 60964314

Gene Structure 5853 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000035105

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1638 bp

ATGGCAATCTTGCTCTCTTCCTCTGCTTCTTCTGCTTCAATCTTCACACCCTCATCATCCCAATCCCTCAAGCCACTGAACCCATCTCTCCCTTTCTCGATCTCCACCGCTAACCCACATCGAAAACCTTCAGGAAGATCAAAAAGCCTCTCTGCTTTAAGAGTAGCAACCCAACCTCAGACCACAGACCCAGATCGACCCACCAAGACAGAACAGGATGGGGAAAGTTACAATCTTGGGGATGAGGTTGAGGATGAAAGCTCAGCAACCAAGTTCAATTGGAGAGATCAGTGGTACCCAGTGTCTTTGATTGAAGATTTGGACCCCAAATTGCCTACCCCATTTCAGCTTCTGGGTCGAGACATAGTTTTGTGGTTCGATAGGAACAAACAGGAATGGGTGGCTTTAGATGACAAATGCCCTCACCGCCTCGCGCCATTATCTGAAGGAAGGATTGATGAAGATGGAAACTTGCAGTGTTCATACCATGGGTGGTCATTTGATGGGTGTGGATCCTGTGTTAAGATTCCACAGGCTTCACCTCAAGGTCCTGAAGCTCGTGCCGTCAGGTCTCCAAGAGCATGTGCCACTAGGTTTCCTACTCAGGTGTCTCAAGGCCTGCTCTTTGTCTGGCCTGATGAGAATGGTTGGGAAAGAGCCAATGCCTCCAAGCCTCCAATGCTACCTGATGAGTTTGGCAAACCTGAGTTTTCAACGGTGACAATCCAGCGTGATCTCTTCTATGGCTATGATACCCTCATGGAAAATGTGTCCGATCCTTCCCACATTGACTTTGCTCATCACAAGGTTACAGGAAGGAGAGATAGAGCTAAGCCTTTGCCATTTAAACTGGAAGATAGTGGCCCTTGGGGCTTTTCTGGAGCAAATGAGGGCAACCCACGGATTACTGCCAAGTTTATAGCGCCTTGTTATTATTTAAATAAAATAGAGATTGATACAAAGCTTCCACTAGTTGGTGATCAAAAATGGGTTATATGGATTTGTTCCTTCAATGTTCCAATGGCACCAGGGAAGACTCGCTCTATTGTTTGTAGTGCTCGAAACTTCTTCCAGTTCAGCATGCCGGGGCCTGCTTGGTGGCAGGTGATTCCTAGATGGCATGAACATTGGACTTCAAATAAGGTGTATGATGGAGACATGATTGTCCTTCAGGGTCAAGAGAAGGTCTTTCTATCCAAGTCAAAGGAGGAATTAGGTGATGTTAATAAGCAGTACACGACAATTACATTTACACCCACACAAGCAGATCGTTTTGTCTTGGCATTTCGAAATTGGCTGAGGCGACACGGCAACAGCCAACCTGAGTGGTTTGGTACAAGCGACCAGCAACCTTTGCCCTCAACTATCTTATCAAAACGTCAGATGTTGGACAGATTTGAGCAGCACACACTTAAATGTTCATCATGTAGAGGAGCTTATACAGCATTCCAGACATGGAAGAAGTTGCTAATTGGAGCAGCCGTTGTTTTCGCCTCAACGGCCGGGATCCCTTCAGGTCTGCAGCTACGGATCATTTTGGCTGGGTTTGCCCTTGTGAGTGCTGGGTTAGCTTATGCTTTACATGAACTGGAAAAGAATTTTGTTTTTGTTGATTATGTACATGCTGACATTGAATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0002376 GO:0003006 GO:0003674 GO:0003824 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006725 GO:0006778 GO:0006787 GO:0006807 GO:0006950 GO:0006952 GO:0006955 GO:0007275 GO:0008150 GO:0008152 GO:0008219 GO:0009056 GO:0009507 GO:0009526 GO:0009528 GO:0009534 GO:0009536 GO:0009579 GO:0009605 GO:0009607 GO:0009617 GO:0009706 GO:0009791 GO:0009814 GO:0009816 GO:0009908 GO:0009941 GO:0009987 GO:0010154 GO:0015994 GO:0015996 GO:0016020 GO:0016491 GO:0016730 GO:0019439 GO:0019866 GO:0022414 GO:0031090 GO:0031967 GO:0031969 GO:0031975 GO:0031976 GO:0031984 GO:0032441 GO:0032501 GO:0032502 GO:0033013 GO:0033015 GO:0034641 GO:0042170 GO:0042440 GO:0042742 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044248 GO:0044270 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0045087 GO:0046149 GO:0046483 GO:0046700 GO:0048037 GO:0048367 GO:0048608 GO:0048731 GO:0048856 GO:0050896 GO:0051186 GO:0051187 GO:0051536 GO:0051540 GO:0051704 GO:0051707 GO:0055114 GO:0061458 GO:0071704 GO:0090567 GO:0098542 GO:1901360 GO:1901361 GO:1901564 GO:1901565 GO:1901575

KEGG Pathways

Metabolic & Signaling

ko00860 ko01110 map00860 map01110

Pfam Domains

Protein Families

PaO Rieske

Protein Analysis

546

Amino Acids

61.33

Weight (kDa)

6.87

Isoelectric Point (pI)

44.8

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Rieske	PF00355	97 - 181	3.3e-24	Rieske [2Fe-2S] domain
PaO	PF08417	306 - 402	4.2e-19	Pheophorbide a oxygenase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0014312)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G44880
fragaria_vesca	FvH4_3g30560 FvH4_3g30560 FvH4_3g30560
malus_domestica	MD11G1149200.v1.1
prunus_persica	Prupe.6G113600_v2.0.a1
pyrus_communis	pycom11g12210
rosa_chinensis	RchiOBHm_Chr5g0056561
rosa_laevigata	RLG00000035105
rosa_multiflora	Rmu_sc0000366.1_g000002
rosa_roxburghii	Rroxscaffold_1G00023780
rosa_rugosa	Rorug05G0300800 Rorug05G0300900
rosa_samantha	Rh5BG382300 Rh5CG405500 Rh5DG395300
rosa_wichuraiana	Rw5G034770

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1093
AasI	GACNNNNNNGTC	1 cut(s)	1163
Acc36I	ACCTGC	1 cut(s)	1093
Acc65I	GGTACC	1 cut(s)	294
AccB1I	GGYRCC	2 cut(s)	294, 1024
AccB7I	CCANNNNNTGG	1 cut(s)	974
AccII	CGCG	1 cut(s)	434
AciI	CCGC	2 cut(s)	108, 427
AclWI	GGATC	6 cut(s)	507, 520, 770, 1501, 1514, 1538
AcoI	YGGCCR	1 cut(s)	1500
AcsI	RAATTY	1 cut(s)	1597
AcuI	CTGAAG	5 cut(s)	114, 465, 573, 1154, 1497
AfaI	GTAC	4 cut(s)	296, 1235, 1336, 1620
AfiI	CCNNNNNNNGG	1 cut(s)	974
AgsI	TTSAA	7 cut(s)	39, 277, 314, 714, 1012, 1137, 1634
AhlI	ACTAGT	1 cut(s)	970
AjnI	CCWGG	1 cut(s)	1027
AluBI	AGCT	8 cut(s)	261, 349, 557, 830, 964, 1436, 1525, 1571
AluI	AGCT	8 cut(s)	261, 349, 557, 830, 964, 1436, 1525, 1571
Alw21I	GWGCWC	1 cut(s)	1060
Alw26I	GTCTC	4 cut(s)	354, 576, 615, 1149
AlwI	GGATC	6 cut(s)	507, 520, 770, 1501, 1514, 1538
AlwNI	CAGNNNCTG	1 cut(s)	352
AoxI	GGCC	5 cut(s)	616, 632, 862, 1088, 1500
ApeKI	GCWGC	3 cut(s)	1402, 1478, 1522
ApoI	RAATTY	1 cut(s)	1597
Asp700I	GAANNNNTTC	1 cut(s)	127
Asp718I	GGTACC	1 cut(s)	294
AspLEI	GCGC	2 cut(s)	436, 925
AspS9I	GGNCC	4 cut(s)	322, 548, 863, 1088
AsuC2I	CCSGG	2 cut(s)	1086, 1504
AsuHPI	GGTGA	6 cut(s)	416, 531, 730, 989, 1117, 1229
AsuII	TTCGAA	1 cut(s)	1288
AvaII	GGWCC	2 cut(s)	322, 548
BamHI	GGATCC	2 cut(s)	512, 1506
BanI	GGYRCC	2 cut(s)	294, 1024
BauI	CACGAG	1 cut(s)	558
BbsI	GAAGAC	1 cut(s)	1040
Bbv12I	GWGCWC	1 cut(s)	1060
BbvCI	CCTCAGC	1 cut(s)	1298
BbvI	GCAGC	3 cut(s)	1414, 1490, 1534
BccI	CCATC	6 cut(s)	91, 212, 458, 497, 1110, 1145
BceAI	ACGGC	4 cut(s)	548, 1324, 1466, 1515
BciT130I	CCWGG	1 cut(s)	1029
BclI	TGATCA	1 cut(s)	979
BcnI	CCSGG	2 cut(s)	1086, 1504
BcoDI	GTCTC	4 cut(s)	354, 576, 615, 1149
BcuI	ACTAGT	1 cut(s)	970
BfaI	CTAG	3 cut(s)	591, 971, 1113
BfmI	CTRYAG	1 cut(s)	1520
BfoI	RGCGCY	1 cut(s)	926
BfuAI	ACCTGC	1 cut(s)	1093
BglI	GCCNNNNNGGC	2 cut(s)	870, 1499
BisI	GCNGC	3 cut(s)	1403, 1479, 1523
BlpI	GCTNAGC	2 cut(s)	262, 831
BlsI	GCNGC	3 cut(s)	1404, 1480, 1524
Bme1390I	CCNGG	3 cut(s)	1029, 1086, 1504
Bme18I	GGWCC	2 cut(s)	322, 548
BmgT120I	GGNCC	4 cut(s)	322, 548, 863, 1088
BmiI	GGNNCC	6 cut(s)	296, 324, 514, 1026, 1089, 1508
BmrFI	CCNGG	3 cut(s)	1029, 1086, 1504
BmrI	ACTGGG	1 cut(s)	293
BmuI	ACTGGG	1 cut(s)	293
BpiI	GAAGAC	1 cut(s)	1040
BpmI	CTGGAG	1 cut(s)	900
Bpu10I	CCTNAGC	1 cut(s)	1298
Bpu1102I	GCTNAGC	2 cut(s)	262, 831
Bpu14I	TTCGAA	1 cut(s)	1288
BpuEI	CTTGAG	3 cut(s)	53, 528, 597
BpuMI	CCSGG	2 cut(s)	1086, 1504
BsaI	GGTCTC	1 cut(s)	576
BsaJI	CCNNGG	5 cut(s)	487, 866, 899, 1028, 1085
BsaXI	ACNNNNNCTCC	2 cut(s)	1467, 1497
Bsc4I	CCNNNNNNNGG	1 cut(s)	974
Bse1I	ACTGG	4 cut(s)	299, 855, 1072, 1593
BseBI	CCWGG	1 cut(s)	1029
BseDI	CCNNGG	5 cut(s)	487, 866, 899, 1028, 1085
BseGI	GGATG	4 cut(s)	56, 223, 247, 259
BseLI	CCNNNNNNNGG	1 cut(s)	974
BseMII	CTCAG	6 cut(s)	191, 276, 617, 696, 1289, 1314
BseNI	ACTGG	4 cut(s)	299, 855, 1072, 1593
BseRI	GAGGAG	1 cut(s)	1446
BseX3I	CGGCCG	1 cut(s)	1500
BseXI	GCAGC	3 cut(s)	1414, 1490, 1534
BseYI	CCCAGC	2 cut(s)	1541, 1562
Bsh1236I	CGCG	1 cut(s)	434
Bsh1285I	CGRYCG	1 cut(s)	1503
BshFI	GGCC	5 cut(s)	618, 634, 864, 1090, 1502
BshNI	GGYRCC	2 cut(s)	294, 1024
BsiEI	CGRYCG	1 cut(s)	1503
BsiHKAI	GWGCWC	1 cut(s)	1060
BsiSI	CCGG	2 cut(s)	1085, 1503
BslI	CCNNNNNNNGG	1 cut(s)	974
BsmAI	GTCTC	4 cut(s)	354, 576, 615, 1149
BsmI	GAATGC	1 cut(s)	1445
BsnI	GGCC	5 cut(s)	618, 634, 864, 1090, 1502
Bso31I	GGTCTC	1 cut(s)	576
Bsp119I	TTCGAA	1 cut(s)	1288
Bsp1286I	GDGCHC	1 cut(s)	1060
Bsp1407I	TGTACA	1 cut(s)	1618
Bsp1720I	GCTNAGC	2 cut(s)	262, 831
Bsp19I	CCATGG	1 cut(s)	487
BspACI	CCGC	2 cut(s)	108, 427
BspANI	GGCC	5 cut(s)	618, 634, 864, 1090, 1502
BspCNI	CTCAG	6 cut(s)	190, 275, 616, 697, 1290, 1315
BspFNI	CGCG	1 cut(s)	434
BspLI	GGNNCC	6 cut(s)	296, 324, 514, 1026, 1089, 1508
BspMAI	CTGCAG	1 cut(s)	1524
BspMI	ACCTGC	1 cut(s)	1093
BspPI	GGATC	6 cut(s)	507, 520, 770, 1501, 1514, 1538
BspT104I	TTCGAA	1 cut(s)	1288
BspT107I	GGYRCC	2 cut(s)	294, 1024
BspTNI	GGTCTC	1 cut(s)	576
BsrGI	TGTACA	1 cut(s)	1618
BsrI	ACTGG	4 cut(s)	299, 855, 1072, 1593
BssECI	CCNNGG	5 cut(s)	487, 866, 899, 1028, 1085
BssSI	CACGAG	1 cut(s)	558
BssT1I	CCWWGG	2 cut(s)	487, 866
Bst2BI	CACGAG	1 cut(s)	558
Bst2UI	CCWGG	1 cut(s)	1029
Bst4CI	ACNGT	1 cut(s)	718
Bst6I	CTCTTC	2 cut(s)	22, 743
BstAPI	GCANNNNNTGC	1 cut(s)	1354
BstAUI	TGTACA	1 cut(s)	1618
BstBI	TTCGAA	1 cut(s)	1288
BstC8I	GCNNGC	3 cut(s)	620, 1082, 1092
BstDEI	CTNAG	7 cut(s)	177, 262, 603, 705, 831, 1298, 1323
BstDSI	CCRYGG	2 cut(s)	487, 899
BstF5I	GGATG	4 cut(s)	56, 223, 247, 259
BstFNI	CGCG	1 cut(s)	434
BstH2I	RGCGCY	1 cut(s)	926
BstHHI	GCGC	2 cut(s)	436, 925
BstMAI	GTCTC	4 cut(s)	354, 576, 615, 1149
BstMCI	CGRYCG	1 cut(s)	1503
BstMWI	GCNNNNNNNGC	9 cut(s)	32, 426, 679, 870, 1354, 1442, 1499, 1547, 1568
BstNI	CCWGG	1 cut(s)	1029
BstNSI	RCATGY	3 cut(s)	585, 1084, 1625
BstSCI	CCNGG	3 cut(s)	1027, 1084, 1502
BstSFI	CTRYAG	1 cut(s)	1520
BstUI	CGCG	1 cut(s)	434
BstV1I	GCAGC	3 cut(s)	1414, 1490, 1534
BstV2I	GAAGAC	1 cut(s)	1040
BstX2I	RGATCY	2 cut(s)	512, 1506
BstYI	RGATCY	2 cut(s)	512, 1506
BstZI	CGGCCG	1 cut(s)	1500
BsuRI	GGCC	5 cut(s)	618, 634, 864, 1090, 1502
BtgI	CCRYGG	2 cut(s)	487, 899
BtsCI	GGATG	4 cut(s)	56, 223, 247, 259
BtsI	GCAGTG	1 cut(s)	482
BtsIMutI	CAGTG	4 cut(s)	74, 296, 306, 482
BveI	ACCTGC	1 cut(s)	1093
Cac8I	GCNNGC	3 cut(s)	620, 1082, 1092
CaiI	CAGNNNCTG	1 cut(s)	352
CfoI	GCGC	2 cut(s)	436, 925
Cfr13I	GGNCC	4 cut(s)	322, 548, 863, 1088
Csp6I	GTAC	4 cut(s)	295, 1234, 1335, 1619
CspCI	CAANNNNNGTGG	2 cut(s)	1307, 1342
CviQI	GTAC	4 cut(s)	295, 1234, 1335, 1619
DdeI	CTNAG	7 cut(s)	177, 262, 603, 705, 831, 1298, 1323
DraI	TTTAAA	2 cut(s)	847, 939
DrdI	GACNNNNNNGTC	1 cut(s)	1163
DseDI	GACNNNNNNGTC	1 cut(s)	1163
EaeI	YGGCCR	1 cut(s)	1500
EagI	CGGCCG	1 cut(s)	1500
Eam1104I	CTCTTC	2 cut(s)	22, 743
EarI	CTCTTC	2 cut(s)	22, 743
EclXI	CGGCCG	1 cut(s)	1500
Eco130I	CCWWGG	2 cut(s)	487, 866
Eco147I	AGGCCT	1 cut(s)	618
Eco31I	GGTCTC	1 cut(s)	576
Eco47I	GGWCC	2 cut(s)	322, 548
Eco52I	CGGCCG	1 cut(s)	1500
Eco57I	CTGAAG	5 cut(s)	114, 465, 573, 1154, 1497
EcoO109I	RGGNCCY	2 cut(s)	548, 1088
EcoRII	CCWGG	1 cut(s)	1027
EcoT14I	CCWWGG	2 cut(s)	487, 866
ErhI	CCWWGG	2 cut(s)	487, 866
FbaI	TGATCA	1 cut(s)	979
Fnu4HI	GCNGC	3 cut(s)	1403, 1479, 1523
FokI	GGATG	4 cut(s)	43, 230, 254, 266
Fsp4HI	GCNGC	3 cut(s)	1403, 1479, 1523
FspBI	CTAG	3 cut(s)	591, 971, 1113
GlaI	GCGC	2 cut(s)	435, 924
GluI	GCNGC	3 cut(s)	1403, 1479, 1523
GsaI	CCCAGC	2 cut(s)	1545, 1566
GsuI	CTGGAG	1 cut(s)	900
HaeII	RGCGCY	1 cut(s)	926
HaeIII	GGCC	5 cut(s)	618, 634, 864, 1090, 1502
HapII	CCGG	2 cut(s)	1085, 1503
HhaI	GCGC	2 cut(s)	436, 925
Hin6I	GCGC	2 cut(s)	434, 923
HinP1I	GCGC	2 cut(s)	434, 923
HindIII	AAGCTT	1 cut(s)	962
HinfI	GANTC	3 cut(s)	526, 1036, 1108
HpaII	CCGG	2 cut(s)	1085, 1503
HphI	GGTGA	6 cut(s)	416, 531, 730, 989, 1117, 1229
Hpy166II	GTNNAC	1 cut(s)	1236
Hpy188I	TCNGA	4 cut(s)	180, 445, 775, 1383
Hpy188III	TCNNGA	7 cut(s)	97, 132, 359, 551, 879, 1178, 1450
Hpy8I	GTNNAC	1 cut(s)	1236
HpyAV	CCTTC	9 cut(s)	138, 440, 444, 789, 810, 1018, 1177, 1178, 1521
HpyCH4III	ACNGT	1 cut(s)	718
HpyCH4IV	ACGT	1 cut(s)	1378
HpyCH4V	TGCA	2 cut(s)	475, 1522
HpyF10VI	GCNNNNNNNGC	9 cut(s)	32, 426, 679, 870, 1354, 1442, 1499, 1547, 1568
HpyF3I	CTNAG	7 cut(s)	177, 262, 603, 705, 831, 1298, 1323
HpySE526I	ACGT	1 cut(s)	1378
HspAI	GCGC	2 cut(s)	434, 923
KpnI	GGTACC	1 cut(s)	298
Ksp22I	TGATCA	1 cut(s)	979
LmnI	GCTCC	3 cut(s)	881, 1433, 1475
Lsp1109I	GCAGC	3 cut(s)	1414, 1490, 1534
MaeI	CTAG	3 cut(s)	591, 971, 1113
MaeII	ACGT	1 cut(s)	1378
MaeIII	GTNAC	3 cut(s)	227, 718, 808
MfeI	CAATTG	1 cut(s)	277
MflI	RGATCY	2 cut(s)	512, 1506
MhlI	GDGCHC	1 cut(s)	1060
MluCI	AATT	7 cut(s)	277, 329, 1211, 1242, 1291, 1470, 1597
MlyI	GAGTC	1 cut(s)	1030
MmeI	TCCRAC	1 cut(s)	1368
MroXI	GAANNNNTTC	1 cut(s)	127
MseI	TTAA	6 cut(s)	158, 522, 846, 938, 1224, 1413
MslI	CAYNNNNRTG	1 cut(s)	1414
MspI	CCGG	2 cut(s)	1085, 1503
MspR9I	CCNGG	3 cut(s)	1029, 1086, 1504
MunI	CAATTG	1 cut(s)	277
Mva1269I	GAATGC	1 cut(s)	1445
MvaI	CCWGG	1 cut(s)	1029
MvnI	CGCG	1 cut(s)	434
MwoI	GCNNNNNNNGC	9 cut(s)	32, 426, 679, 870, 1354, 1442, 1499, 1547, 1568
NciI	CCSGG	2 cut(s)	1086, 1504
NcoI	CCATGG	1 cut(s)	487
NlaIV	GGNNCC	6 cut(s)	296, 324, 514, 1026, 1089, 1508
NmuCI	GTSAC	1 cut(s)	718
NspI	RCATGY	3 cut(s)	585, 1084, 1625
NspV	TTCGAA	1 cut(s)	1288
PaeI	GCATGC	1 cut(s)	1084
PaqCI	CACCTGC	1 cut(s)	1093
PceI	AGGCCT	1 cut(s)	618
PctI	GAATGC	1 cut(s)	1445
PdmI	GAANNNNTTC	1 cut(s)	127
PfeI	GAWTC	2 cut(s)	526, 1108
PflMI	CCANNNNNTGG	1 cut(s)	974
PkrI	GCNGC	3 cut(s)	1404, 1480, 1524
PleI	GAGTC	1 cut(s)	1030
PpsI	GAGTC	1 cut(s)	1030
PpuMI	RGGWCCY	1 cut(s)	548
Psp5II	RGGWCCY	1 cut(s)	548
Psp6I	CCWGG	1 cut(s)	1027
PspFI	CCCAGC	2 cut(s)	1541, 1562
PspGI	CCWGG	1 cut(s)	1027
PspN4I	GGNNCC	6 cut(s)	296, 324, 514, 1026, 1089, 1508
PspPI	GGNCC	4 cut(s)	322, 548, 863, 1088
PspPPI	RGGWCCY	1 cut(s)	548
PstI	CTGCAG	1 cut(s)	1524
PstNI	CAGNNNCTG	1 cut(s)	352
PsuI	RGATCY	2 cut(s)	512, 1506
RsaI	GTAC	4 cut(s)	296, 1235, 1336, 1620
RsaNI	GTAC	4 cut(s)	295, 1234, 1335, 1619
RseI	CAYNNNNRTG	1 cut(s)	1414
SaqAI	TTAA	6 cut(s)	158, 522, 846, 938, 1224, 1413
SatI	GCNGC	3 cut(s)	1403, 1479, 1523
Sau96I	GGNCC	4 cut(s)	322, 548, 863, 1088
SchI	GAGTC	1 cut(s)	1030
ScrFI	CCNGG	3 cut(s)	1029, 1086, 1504
SduI	GDGCHC	1 cut(s)	1060
SfcI	CTRYAG	1 cut(s)	1520
SfuI	TTCGAA	1 cut(s)	1288
SinI	GGWCC	2 cut(s)	322, 548
SmiI	ATTTAAAT	1 cut(s)	939
SmiMI	CAYNNNNRTG	1 cut(s)	1414
SmlI	CTYRAG	3 cut(s)	68, 543, 612
SmoI	CTYRAG	3 cut(s)	68, 543, 612
SpeI	ACTAGT	1 cut(s)	970
SphI	GCATGC	1 cut(s)	1084
Sse9I	AATT	7 cut(s)	277, 329, 1211, 1242, 1291, 1470, 1597
SseBI	AGGCCT	1 cut(s)	618
SsiI	CCGC	2 cut(s)	108, 427
SspMI	CTAG	3 cut(s)	591, 971, 1113
StuI	AGGCCT	1 cut(s)	618
StyD4I	CCNGG	3 cut(s)	1027, 1084, 1502
StyI	CCWWGG	2 cut(s)	487, 866
SwaI	ATTTAAAT	1 cut(s)	939
TaaI	ACNGT	1 cut(s)	718
TaiI	ACGT	1 cut(s)	1381
TaqI	TCGA	7 cut(s)	98, 121, 196, 358, 378, 1060, 1288
TasI	AATT	7 cut(s)	277, 329, 1211, 1242, 1291, 1470, 1597
TatI	WGTACW	2 cut(s)	1233, 1618
TfiI	GAWTC	2 cut(s)	526, 1108
Tru1I	TTAA	6 cut(s)	158, 522, 846, 938, 1224, 1413
Tru9I	TTAA	6 cut(s)	158, 522, 846, 938, 1224, 1413
TscAI	CASTG	4 cut(s)	81, 296, 306, 482
TseFI	GTSAC	1 cut(s)	718
TseI	GCWGC	3 cut(s)	1402, 1478, 1522
Tsp45I	GTSAC	1 cut(s)	718
TspDTI	ATGAA	6 cut(s)	270, 471, 474, 1137, 1410, 1599
TspGWI	ACGGA	2 cut(s)	916, 1543
TspRI	CASTG	4 cut(s)	81, 296, 306, 482
Van91I	CCANNNNNTGG	1 cut(s)	974
VpaK11BI	GGWCC	2 cut(s)	322, 548
XapI	RAATTY	1 cut(s)	1597
XceI	RCATGY	3 cut(s)	585, 1084, 1625
XmnI	GAANNNNTTC	1 cut(s)	127
XspI	CTAG	3 cut(s)	591, 971, 1113

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.